View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20171_high_15 (Length: 239)
Name: NF20171_high_15
Description: NF20171
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20171_high_15 |
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Alignment Details
Target: chr5 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 15 - 221
Target Start/End: Original strand, 441053 - 441259
Alignment:
| Q |
15 |
atgaataatagtaacatctatattcctttcttgtggtccacttatgtgtccacctatgttcctaaaatgtttttgcagaccttttctttgcaattttagc |
114 |
Q |
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| T |
441053 |
atgaataatagtaacgtctatattccttgcttgtggtccacttatgtgtccacctatgttcctaaaatgtttttgcagaccttttctttgcaattttagc |
441152 |
T |
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| Q |
115 |
tgtgtacagctgattacagttggatttaagcttgagcaacgaaatcaaatttgaattttcattttaaatacagtgtaatgtcactatacataaaacaaca |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
441153 |
tgtgtacagctgattacagttggatttaagcttgagcaacgaaatcaaatttgaattttcattttaaatacagtgtaatgtcactatacataaaacaaca |
441252 |
T |
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| Q |
215 |
agtaaat |
221 |
Q |
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||||||| |
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| T |
441253 |
agtaaat |
441259 |
T |
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