View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20171_low_20 (Length: 207)
Name: NF20171_low_20
Description: NF20171
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20171_low_20 |
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Alignment Details
Target: chr4 (Bit Score: 164; Significance: 8e-88; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 164; E-Value: 8e-88
Query Start/End: Original strand, 20 - 191
Target Start/End: Original strand, 24561204 - 24561375
Alignment:
| Q |
20 |
ttatttcccatcactgaagatgaagaagaagatcctatattattcatctgaaacaaaccaggatgattctgataataaccattgtagaatgaacctatgt |
119 |
Q |
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| T |
24561204 |
ttatttcccatcaccgaagatgaagaagaagatcctatattattcatctgaaacaaaccaggatgattctgataataaccattgtagaatgaacctatgt |
24561303 |
T |
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| Q |
120 |
tactattctgagatggttgttggttttgttgttgacacaactcaagctgtgtttggaaataaccgccacctt |
191 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
24561304 |
tactattctgagatggttgttggttttgttgttgacacaactcaagctgtgtttggaaataaccaccacctt |
24561375 |
T |
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