View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20174_high_29 (Length: 290)
Name: NF20174_high_29
Description: NF20174
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20174_high_29 |
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Alignment Details
Target: chr2 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 19 - 274
Target Start/End: Complemental strand, 37544501 - 37544246
Alignment:
| Q |
19 |
tatatgatcatgacatgtaatacgattttcaacatcatcacactaatttaaccaattagcaagtgaatgcatgatatgacaggttcctctcccctctacc |
118 |
Q |
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| T |
37544501 |
tatatgatcatgaaatgtaatacgattttcaacatcatcacactaatttaaccaattagcaagtgagtgcatgatatgacaggttcctctcccctctacc |
37544402 |
T |
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| Q |
119 |
cattatactcaagaatcatgaaaaccactgcttgttattcaaaatctctaatttaaaaccgaatcacactcatgcataggaggggatttggatgaagaac |
218 |
Q |
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| T |
37544401 |
cattatactcaagaatcatgaaaaccactgtttgttattcaaaatctctaatttaaaaccaaatcacactcatgcataggaggggatttggatgaagaac |
37544302 |
T |
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| Q |
219 |
ccacctcaagtatagatttcataaattgaaatggtggtgaagatgacggtcaggac |
274 |
Q |
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| T |
37544301 |
ccacctcaagtatagatttcataaattgaaatggcggtgaagatgacggtcaggac |
37544246 |
T |
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