View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20174_high_35 (Length: 252)

Name: NF20174_high_35
Description: NF20174
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20174_high_35
NF20174_high_35
[»] chr1 (48 HSPs)
chr1 (159-241)||(35005202-35005284)
chr1 (159-242)||(18741955-18742038)
chr1 (166-243)||(50606487-50606564)
chr1 (159-241)||(20004089-20004171)
chr1 (158-243)||(45402174-45402257)
chr1 (164-241)||(10668309-10668386)
chr1 (159-243)||(18944722-18944807)
chr1 (159-244)||(27201726-27201811)
chr1 (159-240)||(4349717-4349796)
chr1 (164-242)||(42304205-42304283)
chr1 (159-244)||(46247949-46248032)
chr1 (182-243)||(43768239-43768300)
chr1 (159-241)||(30395725-30395807)
chr1 (182-243)||(1517308-1517369)
chr1 (159-243)||(45812534-45812616)
chr1 (166-241)||(9939547-9939623)
chr1 (159-211)||(19932782-19932834)
chr1 (105-160)||(4447794-4447849)
chr1 (182-241)||(27474380-27474439)
chr1 (182-244)||(46991904-46991966)
chr1 (159-243)||(31382211-31382293)
chr1 (159-243)||(35019309-35019390)
chr1 (164-243)||(23796549-23796626)
chr1 (177-241)||(34725097-34725161)
chr1 (159-242)||(35253185-35253266)
chr1 (159-241)||(19414516-19414596)
chr1 (164-243)||(19701654-19701732)
chr1 (159-238)||(22324971-22325049)
chr1 (182-241)||(33594130-33594189)
chr1 (164-241)||(14617122-14617197)
chr1 (177-243)||(30555210-30555276)
chr1 (159-244)||(38478278-38478361)
chr1 (182-243)||(6925200-6925261)
chr1 (159-235)||(23768325-23768399)
chr1 (164-240)||(35117765-35117842)
chr1 (123-160)||(48814129-48814166)
chr1 (159-211)||(6358200-6358251)
chr1 (164-243)||(47214593-47214670)
chr1 (159-241)||(12126836-12126916)
chr1 (163-238)||(15511150-15511224)
chr1 (159-241)||(32632556-32632636)
chr1 (199-242)||(50760238-50760281)
chr1 (177-235)||(4587568-4587626)
chr1 (166-228)||(45264411-45264472)
chr1 (164-242)||(50812024-50812100)
chr1 (185-242)||(16120819-16120876)
chr1 (123-160)||(20270593-20270630)
chr1 (105-160)||(5153667-5153726)
[»] chr6 (29 HSPs)
chr6 (156-241)||(12885964-12886049)
chr6 (159-242)||(29355853-29355936)
chr6 (159-241)||(12221913-12221996)
chr6 (167-243)||(12892071-12892147)
chr6 (165-243)||(3116126-3116204)
chr6 (159-243)||(1347018-1347100)
chr6 (164-244)||(2166406-2166486)
chr6 (164-244)||(2178039-2178119)
chr6 (182-242)||(6808472-6808532)
chr6 (159-243)||(9161178-9161262)
chr6 (159-241)||(1354756-1354836)
chr6 (164-240)||(383760-383834)
chr6 (177-242)||(13267797-13267862)
chr6 (177-243)||(18277190-18277256)
chr6 (184-242)||(26097237-26097295)
chr6 (159-239)||(2755422-2755503)
chr6 (105-144)||(2979117-2979156)
chr6 (105-144)||(21038323-21038362)
chr6 (182-241)||(23930126-23930185)
chr6 (177-244)||(24097649-24097716)
chr6 (187-242)||(25557805-25557860)
chr6 (182-240)||(10734905-10734963)
chr6 (166-236)||(14975094-14975164)
chr6 (75-112)||(2978549-2978586)
chr6 (164-240)||(17432407-17432483)
chr6 (164-212)||(24734703-24734751)
chr6 (185-221)||(29016301-29016337)
chr6 (187-243)||(30786371-30786427)
chr6 (177-221)||(32579497-32579541)
[»] chr2 (40 HSPs)
chr2 (159-240)||(10543754-10543835)
chr2 (164-240)||(14530379-14530455)
chr2 (159-243)||(10546219-10546301)
chr2 (159-241)||(9671235-9671315)
chr2 (166-241)||(23488544-23488619)
chr2 (105-160)||(42808528-42808583)
chr2 (159-241)||(24200622-24200704)
chr2 (160-242)||(31158437-31158519)
chr2 (159-241)||(8455315-8455395)
chr2 (177-243)||(14444800-14444866)
chr2 (159-243)||(25249735-25249817)
chr2 (159-243)||(36871548-36871629)
chr2 (177-241)||(44643595-44643659)
chr2 (159-241)||(11514492-11514571)
chr2 (182-245)||(34766332-34766395)
chr2 (164-241)||(21779260-21779335)
chr2 (182-240)||(25079717-25079775)
chr2 (164-241)||(5841089-5841166)
chr2 (182-239)||(40579750-40579807)
chr2 (182-241)||(34080178-34080237)
chr2 (192-241)||(22371199-22371248)
chr2 (177-242)||(26684618-26684683)
chr2 (108-160)||(26826982-26827039)
chr2 (164-240)||(40762234-40762308)
chr2 (182-243)||(41409939-41410000)
chr2 (105-158)||(44089183-44089236)
chr2 (159-228)||(44449395-44449463)
chr2 (185-240)||(8575975-8576030)
chr2 (18-76)||(14530325-14530384)
chr2 (182-241)||(39914305-39914363)
chr2 (159-244)||(17668058-17668141)
chr2 (159-212)||(32781316-32781367)
chr2 (175-240)||(14544136-14544201)
chr2 (177-242)||(17896332-17896397)
chr2 (164-240)||(23397825-23397899)
chr2 (159-243)||(24859985-24860067)
chr2 (159-211)||(24890467-24890517)
chr2 (192-236)||(124918-124962)
chr2 (159-243)||(7214590-7214674)
chr2 (164-243)||(25641562-25641639)
[»] chr5 (32 HSPs)
chr5 (159-241)||(38879637-38879719)
chr5 (159-242)||(43334259-43334341)
chr5 (162-239)||(12006329-12006406)
chr5 (159-241)||(4619103-4619185)
chr5 (164-241)||(16957375-16957450)
chr5 (159-240)||(13801767-13801848)
chr5 (159-243)||(24448946-24449028)
chr5 (169-240)||(25622524-25622595)
chr5 (159-241)||(27328808-27328890)
chr5 (159-241)||(32703478-32703558)
chr5 (182-241)||(39801593-39801652)
chr5 (182-243)||(16028621-16028682)
chr5 (159-242)||(8169982-8170063)
chr5 (159-239)||(20135660-20135740)
chr5 (159-241)||(41014374-41014454)
chr5 (159-241)||(29334451-29334532)
chr5 (159-240)||(34154814-34154893)
chr5 (165-221)||(10306493-10306548)
chr5 (164-240)||(12575660-12575735)
chr5 (189-241)||(32354211-32354263)
chr5 (159-245)||(11657694-11657779)
chr5 (159-240)||(16880647-16880726)
chr5 (159-241)||(28516432-28516513)
chr5 (182-240)||(30877564-30877622)
chr5 (177-243)||(35710383-35710449)
chr5 (177-231)||(43574678-43574732)
chr5 (176-237)||(21784335-21784396)
chr5 (159-240)||(22187341-22187422)
chr5 (108-141)||(34375172-34375205)
chr5 (108-141)||(35540634-35540667)
chr5 (159-231)||(208936-209007)
chr5 (183-239)||(29184062-29184118)
[»] chr3 (48 HSPs)
chr3 (159-241)||(13628789-13628871)
chr3 (159-245)||(40272807-40272891)
chr3 (160-242)||(5173717-5173799)
chr3 (159-240)||(45786214-45786295)
chr3 (159-243)||(46421031-46421116)
chr3 (159-242)||(54484769-54484850)
chr3 (164-243)||(13730599-13730678)
chr3 (159-241)||(29366719-29366801)
chr3 (159-240)||(10795423-10795504)
chr3 (159-244)||(49013469-49013554)
chr3 (159-238)||(353351-353430)
chr3 (175-242)||(516504-516571)
chr3 (164-241)||(12914034-12914109)
chr3 (159-212)||(45139505-45139557)
chr3 (159-243)||(52926216-52926298)
chr3 (164-243)||(8247683-8247763)
chr3 (105-160)||(9144810-9144865)
chr3 (159-245)||(15797298-15797382)
chr3 (159-241)||(25517169-25517249)
chr3 (159-242)||(53996563-53996645)
chr3 (177-243)||(24851298-24851364)
chr3 (159-240)||(14987035-14987116)
chr3 (159-239)||(22122918-22122996)
chr3 (159-239)||(22609843-22609921)
chr3 (159-243)||(26869784-26869866)
chr3 (164-240)||(39203597-39203671)
chr3 (159-242)||(1217166-1217247)
chr3 (185-241)||(10484615-10484671)
chr3 (159-242)||(34771362-34771443)
chr3 (105-160)||(50462708-50462768)
chr3 (164-243)||(25944552-25944630)
chr3 (182-241)||(30452894-30452953)
chr3 (192-243)||(47624208-47624259)
chr3 (198-244)||(4495672-4495718)
chr3 (159-240)||(31592925-31593004)
chr3 (108-160)||(29322821-29322878)
chr3 (164-244)||(829438-829517)
chr3 (199-243)||(40390357-40390401)
chr3 (159-230)||(45948848-45948917)
chr3 (159-229)||(6411833-6411901)
chr3 (159-241)||(16735518-16735598)
chr3 (198-241)||(54032570-54032613)
chr3 (169-243)||(12525493-12525567)
chr3 (159-245)||(54374340-54374425)
chr3 (182-243)||(26573226-26573287)
chr3 (183-243)||(10300591-10300651)
chr3 (109-160)||(31372465-31372521)
chr3 (108-144)||(55140549-55140585)
[»] scaffold0049 (1 HSPs)
scaffold0049 (159-240)||(59033-59114)
[»] scaffold0258 (1 HSPs)
scaffold0258 (182-242)||(13022-13082)
[»] chr4 (61 HSPs)
chr4 (159-243)||(20639655-20639738)
chr4 (159-243)||(30352577-30352661)
chr4 (163-243)||(33836484-33836564)
chr4 (164-243)||(23501848-23501927)
chr4 (171-240)||(44363130-44363199)
chr4 (159-240)||(20225130-20225211)
chr4 (159-243)||(16408598-16408682)
chr4 (159-242)||(13256397-13256480)
chr4 (159-241)||(16911618-16911700)
chr4 (159-237)||(21647020-21647098)
chr4 (182-240)||(38755908-38755966)
chr4 (159-212)||(16494273-16494326)
chr4 (182-243)||(32484310-32484371)
chr4 (159-242)||(5648314-5648395)
chr4 (177-240)||(11394924-11394987)
chr4 (177-240)||(11404651-11404714)
chr4 (164-242)||(25629110-25629186)
chr4 (159-240)||(20225038-20225117)
chr4 (182-240)||(25388253-25388311)
chr4 (159-240)||(30690176-30690255)
chr4 (177-243)||(38786681-38786747)
chr4 (186-240)||(40553937-40553991)
chr4 (182-240)||(44718644-44718702)
chr4 (105-160)||(49268746-49268805)
chr4 (159-239)||(6430627-6430705)
chr4 (159-243)||(9987831-9987913)
chr4 (159-243)||(10660460-10660544)
chr4 (159-243)||(10874605-10874689)
chr4 (159-243)||(30639435-30639517)
chr4 (190-243)||(35532077-35532130)
chr4 (159-243)||(20908633-20908716)
chr4 (159-238)||(29207900-29207977)
chr4 (159-243)||(36816381-36816464)
chr4 (159-242)||(54175119-54175202)
chr4 (177-244)||(35567242-35567309)
chr4 (159-241)||(51865037-51865117)
chr4 (164-239)||(7909281-7909355)
chr4 (159-243)||(11054145-11054227)
chr4 (108-160)||(28972531-28972588)
chr4 (159-239)||(40915884-40915962)
chr4 (159-243)||(47444013-47444095)
chr4 (172-241)||(47482849-47482918)
chr4 (159-243)||(47528527-47528609)
chr4 (167-244)||(54730314-54730391)
chr4 (105-160)||(1763369-1763429)
chr4 (159-239)||(8473621-8473701)
chr4 (159-242)||(9832311-9832392)
chr4 (177-241)||(14983906-14983970)
chr4 (164-240)||(20405148-20405224)
chr4 (164-227)||(41018807-41018868)
chr4 (159-242)||(48598823-48598904)
chr4 (105-144)||(6377622-6377661)
chr4 (105-144)||(28185587-28185626)
chr4 (182-212)||(8820585-8820615)
chr4 (177-243)||(28494223-28494289)
chr4 (159-211)||(17043423-17043473)
chr4 (164-221)||(49938612-49938668)
chr4 (182-243)||(50555653-50555714)
chr4 (159-235)||(21489143-21489218)
chr4 (159-243)||(25343243-25343327)
chr4 (68-112)||(28185042-28185086)
[»] chr8 (42 HSPs)
chr8 (159-241)||(39460993-39461075)
chr8 (159-241)||(12625946-12626026)
chr8 (164-242)||(16013515-16013593)
chr8 (164-244)||(35261740-35261818)
chr8 (159-243)||(7136524-7136608)
chr8 (159-243)||(20869979-20870063)
chr8 (164-243)||(6760883-6760962)
chr8 (159-234)||(20284075-20284150)
chr8 (159-234)||(21070703-21070778)
chr8 (159-241)||(26954189-26954271)
chr8 (163-243)||(26102577-26102655)
chr8 (164-243)||(8897761-8897838)
chr8 (182-242)||(28817624-28817684)
chr8 (159-242)||(25250578-25250661)
chr8 (177-240)||(28407475-28407538)
chr8 (159-241)||(36720852-36720932)
chr8 (159-241)||(44530205-44530285)
chr8 (164-227)||(44781517-44781580)
chr8 (159-240)||(13160757-13160836)
chr8 (159-240)||(29521685-29521764)
chr8 (177-243)||(30454094-30454160)
chr8 (159-243)||(12670247-12670329)
chr8 (159-240)||(16225075-16225156)
chr8 (159-239)||(45071320-45071398)
chr8 (191-243)||(27468089-27468141)
chr8 (105-160)||(37698567-37698620)
chr8 (182-239)||(27507987-27508044)
chr8 (159-200)||(43942380-43942421)
chr8 (182-242)||(10857906-10857966)
chr8 (107-160)||(18405319-18405374)
chr8 (105-160)||(27127153-27127213)
chr8 (159-238)||(29877150-29877227)
chr8 (185-241)||(31457252-31457308)
chr8 (177-241)||(35107310-35107374)
chr8 (164-242)||(5135288-5135363)
chr8 (18-76)||(22598164-22598223)
chr8 (159-240)||(2626578-2626657)
chr8 (192-242)||(18164758-18164808)
chr8 (182-231)||(8483947-8483996)
chr8 (108-165)||(30232764-30232820)
chr8 (108-160)||(44598941-44598998)
chr8 (105-141)||(10730432-10730468)
[»] scaffold0057 (3 HSPs)
scaffold0057 (164-243)||(46892-46969)
scaffold0057 (160-244)||(46703-46786)
scaffold0057 (177-243)||(24769-24835)
[»] chr7 (40 HSPs)
chr7 (164-242)||(42805585-42805663)
chr7 (159-243)||(7879694-7879776)
chr7 (159-244)||(27889312-27889395)
chr7 (159-243)||(42391097-42391179)
chr7 (159-243)||(43557528-43557613)
chr7 (159-240)||(47716515-47716596)
chr7 (164-243)||(32758320-32758397)
chr7 (164-239)||(3469176-3469251)
chr7 (159-241)||(21172008-21172088)
chr7 (159-236)||(33871914-33871989)
chr7 (164-241)||(35787268-35787343)
chr7 (193-243)||(36602535-36602585)
chr7 (159-240)||(48735122-48735201)
chr7 (160-243)||(38262193-38262274)
chr7 (159-240)||(45018923-45019006)
chr7 (177-240)||(2541019-2541082)
chr7 (167-210)||(39123957-39124000)
chr7 (159-240)||(10693073-10693152)
chr7 (159-240)||(22698967-22699049)
chr7 (159-240)||(23419674-23419753)
chr7 (177-243)||(34626205-34626271)
chr7 (159-239)||(11617589-11617667)
chr7 (159-212)||(33500569-33500622)
chr7 (182-238)||(18512455-18512511)
chr7 (177-241)||(31591108-31591172)
chr7 (182-238)||(35334818-35334874)
chr7 (177-241)||(40463948-40464012)
chr7 (159-242)||(42798725-42798806)
chr7 (189-243)||(25198810-25198864)
chr7 (166-239)||(29907482-29907552)
chr7 (182-239)||(18747564-18747621)
chr7 (159-243)||(19426887-19426968)
chr7 (177-242)||(23618975-23619040)
chr7 (177-242)||(27629706-27629771)
chr7 (159-231)||(21566491-21566562)
chr7 (194-238)||(27697528-27697572)
chr7 (105-137)||(45261872-45261904)
chr7 (177-245)||(45811919-45811986)
chr7 (159-211)||(46354250-46354302)
chr7 (164-243)||(47077852-47077929)
[»] scaffold0168 (1 HSPs)
scaffold0168 (159-242)||(30633-30714)
[»] scaffold0015 (1 HSPs)
scaffold0015 (159-241)||(48633-48713)
[»] scaffold0180 (1 HSPs)
scaffold0180 (159-243)||(24130-24212)
[»] scaffold0311 (1 HSPs)
scaffold0311 (177-241)||(10882-10946)
[»] scaffold1176 (1 HSPs)
scaffold1176 (159-236)||(1591-1666)
[»] scaffold0187 (2 HSPs)
scaffold0187 (159-238)||(10052-10129)
scaffold0187 (159-238)||(20380-20457)
[»] scaffold0223 (1 HSPs)
scaffold0223 (159-240)||(11185-11264)
[»] scaffold0018 (1 HSPs)
scaffold0018 (159-240)||(72867-72946)
[»] scaffold0242 (1 HSPs)
scaffold0242 (108-160)||(4232-4289)


Alignment Details
Target: chr1 (Bit Score: 63; Significance: 2e-27; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 159 - 241
Target Start/End: Original strand, 35005202 - 35005284
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 241  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||||||| | |||||| |||||||||||||||||||    
T  35005202 ctgcatacaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgcgggcgctttagtgcaccgggttgccctttt 35005284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 159 - 242
Target Start/End: Complemental strand, 18742038 - 18741955
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttt 242  Q
    |||| ||||||||||||||||| ||||||||||||||||||||||||||||||| | |||||| ||||||||||| ||||||||    
T  18742038 ctgcgtacaatacaccaaaaatggtgggaccccttcccagaccctgcgtatgcgagagctttagtgcaccgggtttcccttttt 18741955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 166 - 243
Target Start/End: Original strand, 50606487 - 50606564
Alignment:
Q  166 caatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 243  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||| | |||||| |||||||||||||||||||||    
T  50606487 caatacaccaaaaatggtgggaccccttcccggaccctgcatatgcgggagctttagtgcaccgggttgccctttttt 50606564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 159 - 241
Target Start/End: Complemental strand, 20004171 - 20004089
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 241  Q
    |||| ||||||||||||| ||| ||||||||||||||||||||| || |||||| | |||||| |||||||||||||||||||    
T  20004171 ctgcgtacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgccctttt 20004089  T

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Target: chr1; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 158 - 243
Target Start/End: Original strand, 45402174 - 45402257
Alignment:
Q  158 tctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 243  Q
    ||||| ||||||||||||||  | ||||||||||||||||||||||||||||||| | |||||| ||||||||||||||| |||||    
T  45402174 tctgcgtacaatacaccaaa--tggtgggaccccttcccagaccctgcgtatgcgggagctttagtgcaccgggttgcccgttttt 45402257  T

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Target: chr1; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 164 - 241
Target Start/End: Original strand, 10668309 - 10668386
Alignment:
Q  164 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 241  Q
    ||||||||||||| ||| ||||||||||||||| | ||||||||||||| | |||||| |||||||||||||||||||    
T  10668309 tacaatacaccaataatggtgggaccccttcccggtccctgcgtatgcgggagctttagtgcaccgggttgccctttt 10668386  T

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Target: chr1; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 159 - 243
Target Start/End: Original strand, 18944722 - 18944807
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggc-tttaatgcaccgggttgccctttttt 243  Q
    |||| ||||||||||||| ||| ||||||||||||||| ||||||||||||||| | || |||| |||||||||||||||||||||    
T  18944722 ctgcgtacaatacaccaacaatggtgggaccccttcccggaccctgcgtatgcgggagcttttagtgcaccgggttgccctttttt 18944807  T

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Target: chr1; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 159 - 244
Target Start/End: Original strand, 27201726 - 27201811
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttta 244  Q
    |||| ||||||||||||||||| ||||||||||||||| |||| |||||||||| | |||||| ||||  ||||||||||||||||    
T  27201726 ctgcgtacaatacaccaaaaatggtgggaccccttcccggaccttgcgtatgcgggagctttagtgcattgggttgccctttttta 27201811  T

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Target: chr1; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 159 - 240
Target Start/End: Original strand, 4349717 - 4349796
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 240  Q
    |||| ||||||||||||||  | ||||||||||||||| ||||||||||||||| | |||||| ||||||||||||||||||    
T  4349717 ctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 4349796  T

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Target: chr1; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 164 - 242
Target Start/End: Complemental strand, 42304283 - 42304205
Alignment:
Q  164 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttt 242  Q
    |||||||||| |||||| ||||||||||||||| ||||||||||||| | | |||||| |||||||| |||||||||||    
T  42304283 tacaatacacaaaaaatggtgggaccccttcccggaccctgcgtatgtgggagctttagtgcaccggattgcccttttt 42304205  T

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Target: chr1; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 159 - 244
Target Start/End: Complemental strand, 46248032 - 46247949
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttta 244  Q
    |||| ||||||||||||||  | ||||||||||||||| ||||||||||||||| | |||||| || |||||||||||||||||||    
T  46248032 ctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgtaccgggttgccctttttta 46247949  T

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Target: chr1; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 182 - 243
Target Start/End: Original strand, 43768239 - 43768300
Alignment:
Q  182 gtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 243  Q
    |||||||||||||||||||||||||||| || | |||||||||||||||| |||||||||||    
T  43768239 gtgggaccccttcccagaccctgcgtatacgggagctttaatgcaccgggctgccctttttt 43768300  T

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Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 159 - 241
Target Start/End: Complemental strand, 30395807 - 30395725
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 241  Q
    |||| ||||||||||||| ||| ||||||||||||||| ||||| || |||||| | |||||| ||||||| |||||||||||    
T  30395807 ctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgggagctttagtgcaccgagttgccctttt 30395725  T

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Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 243
Target Start/End: Complemental strand, 1517369 - 1517308
Alignment:
Q  182 gtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 243  Q
    ||||||||||||| ||||||||||||||||  | |||||| |||||||||||||||||||||    
T  1517369 gtgggaccccttctcagaccctgcgtatgcaggagctttagtgcaccgggttgccctttttt 1517308  T

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Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 159 - 243
Target Start/End: Complemental strand, 45812616 - 45812534
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 243  Q
    |||||||||||||||||||  | |||||||||||||||| ||||||| |||||| | ||| || |||||||||||||| ||||||    
T  45812616 ctgcatacaatacaccaaa--tggtgggaccccttcccaaaccctgcatatgcgggagctctagtgcaccgggttgccttttttt 45812534  T

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Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 166 - 241
Target Start/End: Original strand, 9939547 - 9939623
Alignment:
Q  166 caatacaccaaaaatagtgggacccc-ttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 241  Q
    ||||||||||||||| |||||||||| ||| | ||||||||||||||| | |||||| ||||||||||| |||||||    
T  9939547 caatacaccaaaaatggtgggacccccttctcggaccctgcgtatgcgggagctttagtgcaccgggttaccctttt 9939623  T

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Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 211
Target Start/End: Complemental strand, 19932834 - 19932782
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgc 211  Q
    |||| ||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  19932834 ctgcgtacaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgc 19932782  T

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Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 105 - 160
Target Start/End: Original strand, 4447794 - 4447849
Alignment:
Q  105 tggcccatttctatagttgggcctctcgggcccgggccggcccatttgacacctct 160  Q
    ||||||||||||||||| ||||||||  |||||| |||||||||||||||||||||    
T  4447794 tggcccatttctatagtcgggcctcttaggcccgagccggcccatttgacacctct 4447849  T

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Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 182 - 241
Target Start/End: Original strand, 27474380 - 27474439
Alignment:
Q  182 gtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 241  Q
    ||||||||||||||| ||||||||||||||| | |||||| |||||||| ||||||||||    
T  27474380 gtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccggattgccctttt 27474439  T

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Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 182 - 244
Target Start/End: Original strand, 46991904 - 46991966
Alignment:
Q  182 gtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttta 244  Q
    ||||||||||||||| ||||||||||||| | | |||||| ||||||||||||||| ||||||    
T  46991904 gtgggaccccttcccggaccctgcgtatgtgggagctttagtgcaccgggttgcccattttta 46991966  T

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Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 243
Target Start/End: Complemental strand, 31382293 - 31382211
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 243  Q
    |||| ||||||||||||||  | ||||||||||||||  |||||||| |||||| | |||||| || ||||||||||||||||||    
T  31382293 ctgcgtacaatacaccaaa--tggtgggaccccttcctggaccctgcatatgcgggagctttactgtaccgggttgccctttttt 31382211  T

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Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 243
Target Start/End: Original strand, 35019309 - 35019390
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 243  Q
    ||||||||||||||||||   | ||||||||||| ||||||||||||||||||| | |||||| ||||||||| |||| ||||||    
T  35019309 ctgcatacaatacaccaat--tggtgggacccct-cccagaccctgcgtatgcgagagctttagtgcaccgggctgccatttttt 35019390  T

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Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 164 - 243
Target Start/End: Original strand, 23796549 - 23796626
Alignment:
Q  164 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 243  Q
    ||||||||||||||  | ||| |||||||||||||||||||| |||||  | |||||| ||||||||| |||||||||||    
T  23796549 tacaatacaccaaa--tggtgagaccccttcccagaccctgcatatgctggagctttagtgcaccgggctgccctttttt 23796626  T

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Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 177 - 241
Target Start/End: Complemental strand, 34725161 - 34725097
Alignment:
Q  177 aaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 241  Q
    |||| ||||||||||||||| |||||||| |||||| | ||| || |||||||||||||||||||    
T  34725161 aaatggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttt 34725097  T

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Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 159 - 242
Target Start/End: Complemental strand, 35253266 - 35253185
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttt 242  Q
    |||| ||||||||||||||  | ||||||||||||||| |||||||| |||||| | ||| || |||||||| |||||||||||    
T  35253266 ctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccggattgcccttttt 35253185  T

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Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 241
Target Start/End: Original strand, 19414516 - 19414596
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 241  Q
    |||| ||||||||||||||  | |||||||||||||||  ||||||| |||||| | ||| || |||||||||||||||||||    
T  19414516 ctgcgtacaatacaccaaa--tggtgggaccccttcccgtaccctgcatatgcgggagctctagtgcaccgggttgccctttt 19414596  T

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Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 243
Target Start/End: Original strand, 19701654 - 19701732
Alignment:
Q  164 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 243  Q
    ||||||||||||||| | ||||| ||||||||| ||||||||||||||| | |||||| |||||| || | |||||||||    
T  19701654 tacaatacaccaaaa-tggtggggccccttcccggaccctgcgtatgcgggagctttagtgcaccaggctaccctttttt 19701732  T

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Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 238
Target Start/End: Original strand, 22324971 - 22325049
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccct 238  Q
    |||||||||||||||||||||| ||||  |||| |||| ||||||||||||||| | |||||| |||||| || ||||||    
T  22324971 ctgcatacaatacaccaaaaatggtggagccccgtccc-gaccctgcgtatgcgggagctttagtgcaccaggctgccct 22325049  T

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Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 182 - 241
Target Start/End: Complemental strand, 33594189 - 33594130
Alignment:
Q  182 gtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 241  Q
    ||||||||||||||||||||||||||||||| | |||||| ||||| ||| | |||||||    
T  33594189 gtgggaccccttcccagaccctgcgtatgcgggagctttagtgcactgggctaccctttt 33594130  T

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Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 241
Target Start/End: Original strand, 14617122 - 14617197
Alignment:
Q  164 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 241  Q
    ||||||||||||||  | |||||| |||||||| |||||||| |||||| | |||||| ||||||||||| |||||||    
T  14617122 tacaatacaccaaa--tggtgggatcccttcccggaccctgcatatgcgggagctttagtgcaccgggttaccctttt 14617197  T

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Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 243
Target Start/End: Original strand, 30555210 - 30555276
Alignment:
Q  177 aaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 243  Q
    |||| ||||||||||||| | ||||||||||||||| | |||||| ||||||||| || ||||||||    
T  30555210 aaatggtgggaccccttcacggaccctgcgtatgcgagagctttagtgcaccgggctgacctttttt 30555276  T

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Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 159 - 244
Target Start/End: Complemental strand, 38478361 - 38478278
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttta 244  Q
    |||| ||||||||||||||  | |||| |||||||| | |||||||| |||||| | ||| || ||||||||||||||||||||||    
T  38478361 ctgcgtacaatacaccaaa--tggtggaaccccttctcggaccctgcatatgcgggagctctagtgcaccgggttgccctttttta 38478278  T

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Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 243
Target Start/End: Original strand, 6925200 - 6925261
Alignment:
Q  182 gtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 243  Q
    ||||||||||||||| | ||||||||||||| | |||||| ||||||| |||||| ||||||    
T  6925200 gtgggaccccttcccggtccctgcgtatgcgggagctttagtgcaccgagttgccttttttt 6925261  T

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Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 235
Target Start/End: Complemental strand, 23768399 - 23768325
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgc 235  Q
    |||| ||||||||||||||  | ||||||| ||||||||||||||||||||||| | |||||| |||| ||| ||||    
T  23768399 ctgcgtacaatacaccaaa--tggtgggacaccttcccagaccctgcgtatgcgggagctttagtgcagcggattgc 23768325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 164 - 240
Target Start/End: Complemental strand, 35117842 - 35117765
Alignment:
Q  164 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgt-atgcgcgggctttaatgcaccgggttgcccttt 240  Q
    |||||||||||||||||  |||||||||||||| |||||||||| ||||  | |||||| ||||||||| | ||||||    
T  35117842 tacaatacaccaaaaatgatgggaccccttcccggaccctgcgtaatgcaggagctttagtgcaccgggcttcccttt 35117765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 160
Target Start/End: Complemental strand, 48814166 - 48814129
Alignment:
Q  123 gggcctctcgggcccgggccggcccatttgacacctct 160  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  48814166 gggcctcgcgggcccgggccggcccatttgacacctct 48814129  T

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Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 211
Target Start/End: Original strand, 6358200 - 6358251
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgc 211  Q
    |||| ||||| ||||||||| | ||||||||||||||||||||||||||||||    
T  6358200 ctgcgtacaaaacaccaaaa-tggtgggaccccttcccagaccctgcgtatgc 6358251  T

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Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 243
Target Start/End: Original strand, 47214593 - 47214670
Alignment:
Q  164 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 243  Q
    ||||||||||||||  | |||||||||||||||||||||||| |||||| | ||| || |||||| | || |||||||||    
T  47214593 tacaatacaccaaa--tggtgggaccccttcccagaccctgcatatgcgggagctctagtgcaccagattaccctttttt 47214670  T

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Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 241
Target Start/End: Complemental strand, 12126916 - 12126836
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 241  Q
    |||| ||||||||||||||  | ||||||||||||||| |||||||| |||||| | ||| || ||||| | |||||||||||    
T  12126916 ctgcgtacaatacaccaaa--ttgtgggaccccttcccggaccctgcatatgcgggagctgtagtgcactgcgttgccctttt 12126836  T

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Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 238
Target Start/End: Complemental strand, 15511224 - 15511150
Alignment:
Q  163 atacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccct 238  Q
    |||||||||||||||| | |||| |||||||||  ||||||||||||| | | |||||| ||||||||| ||||||    
T  15511224 atacaatacaccaaaa-tggtggtaccccttcctggaccctgcgtatgtgtgagctttagtgcaccgggctgccct 15511150  T

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Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 241
Target Start/End: Complemental strand, 32632636 - 32632556
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 241  Q
    |||| ||||||||||||||  | |||||||||||||||| ||||||| |||||| | |||| | |||||| |||| |||||||    
T  32632636 ctgcgtacaatacaccaaa--tggtgggaccccttcccaaaccctgcatatgcgggagcttgagtgcaccaggtttccctttt 32632556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 199 - 242
Target Start/End: Complemental strand, 50760281 - 50760238
Alignment:
Q  199 accctgcgtatgcgcgggctttaatgcaccgggttgcccttttt 242  Q
    |||||||||||||| | |||||||||||||||| ||||||||||    
T  50760281 accctgcgtatgcgggagctttaatgcaccgggctgcccttttt 50760238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 235
Target Start/End: Complemental strand, 4587626 - 4587568
Alignment:
Q  177 aaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgc 235  Q
    |||| ||||||||||||||| |||||||| |||||| | |||| | |||||||||||||    
T  4587626 aaatggtgggaccccttcccggaccctgcctatgcgggagcttcagtgcaccgggttgc 4587568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 228
Target Start/End: Complemental strand, 45264472 - 45264411
Alignment:
Q  166 caatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcacc 228  Q
    ||||||||||||| | ||||||||||||| |||||||||| |||||| | |||||| ||||||    
T  45264472 caatacaccaaaa-tggtgggaccccttctcagaccctgcatatgcgggagctttagtgcacc 45264411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 242
Target Start/End: Original strand, 50812024 - 50812100
Alignment:
Q  164 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttt 242  Q
    ||||||||||||||| | |||| ||||||||||   ||||||||||||| | |||||||||||| ||| ||||||||||    
T  50812024 tacaatacaccaaaa-tggtgg-accccttcccgcgccctgcgtatgcgggagctttaatgcactgggctgcccttttt 50812100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 242
Target Start/End: Original strand, 16120819 - 16120876
Alignment:
Q  185 ggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttt 242  Q
    |||||||||||| | |||||| |||||| | ||||||||||||| || ||||||||||    
T  16120819 ggaccccttcccggcccctgcatatgcgggagctttaatgcaccaggctgcccttttt 16120876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 123 - 160
Target Start/End: Complemental strand, 20270630 - 20270593
Alignment:
Q  123 gggcctctcgggcccgggccggcccatttgacacctct 160  Q
    ||||||||||||| |||||| |||||||||||||||||    
T  20270630 gggcctctcgggctcgggccagcccatttgacacctct 20270593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 160
Target Start/End: Complemental strand, 5153726 - 5153667
Alignment:
Q  105 tggcccatttctatagttgggcctctcgggc-----ccgggccggcccatttgacacctct 160  Q
    ||||||||||| ||||| |||||||||||||     |||||||||||||||||||||||||    
T  5153726 tggcccatttc-atagtcgggcctctcgggcttgggccgggccggcccatttgacacctct 5153667  T

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Target: chr6 (Bit Score: 58; Significance: 2e-24; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 156 - 241
Target Start/End: Original strand, 12885964 - 12886049
Alignment:
Q  156 cctctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 241  Q
    ||||||| |||||||||| |||||| ||||||||||||||||||||||||||||| | | |||||| |||||||||||||||||||    
T  12885964 cctctgcgtacaatacacaaaaaatggtgggaccccttcccagaccctgcgtatgtgggagctttagtgcaccgggttgccctttt 12886049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 159 - 242
Target Start/End: Complemental strand, 29355936 - 29355853
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttt 242  Q
    |||| ||||||||||||| ||| ||||||||||||||| ||||||||||||||| | |||||| ||||||||||||||||||||    
T  29355936 ctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttttt 29355853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 159 - 241
Target Start/End: Complemental strand, 12221996 - 12221913
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggc-tttaatgcaccgggttgccctttt 241  Q
    |||| ||||||||||||| ||| ||||||||||||||| ||||||||||||||| | || |||| |||||||||||||||||||    
T  12221996 ctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgtatgcgggagcttttagtgcaccgggttgccctttt 12221913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 167 - 243
Target Start/End: Original strand, 12892071 - 12892147
Alignment:
Q  167 aatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 243  Q
    |||||||||| ||| ||||||||||||||| ||||| || |||||| | |||||| |||||||||||||||||||||    
T  12892071 aatacaccaataatggtgggaccccttcccggaccccgcatatgcgggagctttagtgcaccgggttgccctttttt 12892147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 165 - 243
Target Start/End: Complemental strand, 3116204 - 3116126
Alignment:
Q  165 acaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 243  Q
    |||||||||||||||| ||||||||||||| | |||| |||||||||| | |||||| | |||||| ||||||||||||    
T  3116204 acaatacaccaaaaatggtgggaccccttctcggaccttgcgtatgcgggagctttagtacaccggattgccctttttt 3116126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 159 - 243
Target Start/End: Original strand, 1347018 - 1347100
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 243  Q
    |||| ||||||||||||||  | ||||||||||||||| |||||||| |||||| | ||| || |||||||||||||||||||||    
T  1347018 ctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttttt 1347100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 164 - 244
Target Start/End: Complemental strand, 2166486 - 2166406
Alignment:
Q  164 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttta 244  Q
    ||||||||||||| ||| ||||||||||||||| ||||||   ||| || | |||||| ||||||||||||||||||||||    
T  2166486 tacaatacaccaataatggtgggaccccttcccggaccctatatattcgggagctttagtgcaccgggttgccctttttta 2166406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 164 - 244
Target Start/End: Complemental strand, 2178119 - 2178039
Alignment:
Q  164 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttta 244  Q
    ||||||||||||| ||| ||||||||||||||| ||||||   ||| || | |||||| ||||||||||||||||||||||    
T  2178119 tacaatacaccaataatggtgggaccccttcccggaccctatatattcgggagctttagtgcaccgggttgccctttttta 2178039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 182 - 242
Target Start/End: Original strand, 6808472 - 6808532
Alignment:
Q  182 gtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttt 242  Q
    ||||||||||||||| ||||||| ||||||| | |||||| ||||||||||||||||||||    
T  6808472 gtgggaccccttcccggaccctgtgtatgcgggagctttagtgcaccgggttgcccttttt 6808532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 243
Target Start/End: Original strand, 9161178 - 9161262
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 243  Q
    |||| ||||||||| ||| ||| ||||||||||||| | |||||||||||||||   |||||| |||||| ||||||||||||||    
T  9161178 ctgcgtacaatacatcaataatggtgggaccccttctcggaccctgcgtatgcggaagctttagtgcaccaggttgccctttttt 9161262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 159 - 241
Target Start/End: Complemental strand, 1354836 - 1354756
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 241  Q
    |||| ||||||||||||||  | ||||||||||||||| |||||||| |||||| | ||| || |||||||||||||||||||    
T  1354836 ctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttt 1354756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 164 - 240
Target Start/End: Complemental strand, 383834 - 383760
Alignment:
Q  164 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 240  Q
    ||||||||||||||  | ||||||||||||| ||||||||||||||||| | |||| | | ||||||||||||||||    
T  383834 tacaatacaccaaa--ttgtgggaccccttctcagaccctgcgtatgcgggagcttcagtccaccgggttgcccttt 383760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 177 - 242
Target Start/End: Original strand, 13267797 - 13267862
Alignment:
Q  177 aaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttt 242  Q
    |||| ||||||||||||||  ||||||||||||||| | |||| | ||||||||||||||||||||    
T  13267797 aaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccgggttgcccttttt 13267862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 243
Target Start/End: Complemental strand, 18277256 - 18277190
Alignment:
Q  177 aaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 243  Q
    |||| |||||||||||||| |||| || |||||||| | |||||| |||||||||||| ||||||||    
T  18277256 aaatggtgggaccccttcctagactctacgtatgcgggagctttactgcaccgggttgtcctttttt 18277190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 242
Target Start/End: Original strand, 26097237 - 26097295
Alignment:
Q  184 gggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttt 242  Q
    ||||||||||||| |||||||| |||||| | ||| || ||||||||||||||||||||    
T  26097237 gggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgcccttttt 26097295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 2755503 - 2755422
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgg--gctttaatgcaccgggttgccctt 239  Q
    |||| ||||||||||||||||| ||||||  |||||||| | ||||| |||||||||  |||||| |||||| ||||||||||    
T  2755503 ctgcgtacaatacaccaaaaatggtgggagtccttcccaaatcctgcatatgcgcgggagctttagtgcacc-ggttgccctt 2755422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 144
Target Start/End: Original strand, 2979117 - 2979156
Alignment:
Q  105 tggcccatttctatagttgggcctctcgggcccgggccgg 144  Q
    ||||||||||||||||| ||||||||||||| ||||||||    
T  2979117 tggcccatttctatagtcgggcctctcgggctcgggccgg 2979156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 144
Target Start/End: Complemental strand, 21038362 - 21038323
Alignment:
Q  105 tggcccatttctatagttgggcctctcgggcccgggccgg 144  Q
    ||||||||||||||||| |||||||||||||||| |||||    
T  21038362 tggcccatttctatagtcgggcctctcgggcccgagccgg 21038323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 182 - 241
Target Start/End: Complemental strand, 23930185 - 23930126
Alignment:
Q  182 gtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 241  Q
    ||||||||||||| | |||||||| |||||| | |||||| ||||||| |||||||||||    
T  23930185 gtgggaccccttcacggaccctgcttatgcgggagctttagtgcaccgagttgccctttt 23930126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 244
Target Start/End: Original strand, 24097649 - 24097716
Alignment:
Q  177 aaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttta 244  Q
    |||| ||||||||||||||| |||||||||||||||   |||||| ||  || |||||||||||||||    
T  24097649 aaatggtgggaccccttcccggaccctgcgtatgcggaagctttagtgtcccaggttgccctttttta 24097716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 187 - 242
Target Start/End: Original strand, 25557805 - 25557860
Alignment:
Q  187 accccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttt 242  Q
    |||||||||| |||||||| |||||| | ||| || ||||||||||||||||||||    
T  25557805 accccttcccggaccctgcatatgcgggagctctagtgcaccgggttgcccttttt 25557860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 240
Target Start/End: Complemental strand, 10734963 - 10734905
Alignment:
Q  182 gtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 240  Q
    ||||| ||||||||| ||||||||||||||| | |||||| | ||||||| ||||||||    
T  10734963 gtgggcccccttcccggaccctgcgtatgcgggagctttagtccaccgggctgcccttt 10734905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 236
Target Start/End: Complemental strand, 14975164 - 14975094
Alignment:
Q  166 caatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcc 236  Q
    ||||||||||| ||| |||||||||||||||  |||| || |||||| | | |||| ||||||||||||||    
T  14975164 caatacaccaataatggtgggaccccttcccgaaccccgcatatgcgggagttttagtgcaccgggttgcc 14975094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 112
Target Start/End: Original strand, 2978549 - 2978586
Alignment:
Q  75 attagagctgtcaaaaatgagccggtccattggcccat 112  Q
    ||||||||||||||||||| |||||||||||| |||||    
T  2978549 attagagctgtcaaaaatgggccggtccattgtcccat 2978586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 240
Target Start/End: Original strand, 17432407 - 17432483
Alignment:
Q  164 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 240  Q
    |||||||||| |||||| ||| ||||  ||||| || |||| | ||||| | |||||| ||||||||||||||||||    
T  17432407 tacaatacactaaaaatggtgagaccttttcccggatcctgtgcatgcgggagctttagtgcaccgggttgcccttt 17432483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 212
Target Start/End: Original strand, 24734703 - 24734751
Alignment:
Q  164 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcg 212  Q
    ||||||||| ||||||  ||||||||||||||| || ||||||||||||    
T  24734703 tacaatacaacaaaaaaggtgggaccccttcccggatcctgcgtatgcg 24734751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 221
Target Start/End: Complemental strand, 29016337 - 29016301
Alignment:
Q  185 ggaccccttcccagaccctgcgtatgcgcgggcttta 221  Q
    |||||||||||||||||||||||||||| | ||||||    
T  29016337 ggaccccttcccagaccctgcgtatgcgggagcttta 29016301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 243
Target Start/End: Complemental strand, 30786427 - 30786371
Alignment:
Q  187 accccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 243  Q
    |||||||||  |||| |||||||||| | |||||| |||||||||||||| ||||||    
T  30786427 accccttcctggaccgtgcgtatgcgggagctttagtgcaccgggttgccttttttt 30786371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 221
Target Start/End: Original strand, 32579497 - 32579541
Alignment:
Q  177 aaatagtgggaccccttcccagaccctgcgtatgcgcgggcttta 221  Q
    |||| |||||||||||||||||||||||| |||||| | ||||||    
T  32579497 aaatggtgggaccccttcccagaccctgcatatgcgggagcttta 32579541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 2e-24; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 159 - 240
Target Start/End: Original strand, 10543754 - 10543835
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 240  Q
    |||| ||||||||||||||||| ||||||||||||||| ||||||||||||||| | |||||| ||||||||||||||||||    
T  10543754 ctgcgtacaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 10543835  T

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Target: chr2; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 164 - 240
Target Start/End: Original strand, 14530379 - 14530455
Alignment:
Q  164 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 240  Q
    ||||||||||||| ||| ||||||||||||||| ||||||||||||||| | |||||| ||||||||||||||||||    
T  14530379 tacaatacaccaataatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 14530455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 159 - 243
Target Start/End: Original strand, 10546219 - 10546301
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 243  Q
    |||| ||||||||||||||  | ||||||||||||||| ||||||||||||||| | |||||| |||||||||||||||||||||    
T  10546219 ctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttttt 10546301  T

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Target: chr2; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 159 - 241
Target Start/End: Original strand, 9671235 - 9671315
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 241  Q
    |||| ||||||||||||||  | ||||||||||||||| ||||||||||||||| | |||||| |||||||||||||||||||    
T  9671235 ctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttt 9671315  T

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Target: chr2; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 166 - 241
Target Start/End: Original strand, 23488544 - 23488619
Alignment:
Q  166 caatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 241  Q
    |||||||| |||||| ||||||||||||||| ||||||||||||||| | |||||| ||||||||||||| |||||    
T  23488544 caatacacaaaaaatggtgggaccccttcccggaccctgcgtatgcgagagctttagtgcaccgggttgctctttt 23488619  T

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Target: chr2; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 105 - 160
Target Start/End: Original strand, 42808528 - 42808583
Alignment:
Q  105 tggcccatttctatagttgggcctctcgggcccgggccggcccatttgacacctct 160  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  42808528 tggcccatttctatattcgggcctctcgggcccgggccggcccatttgacacctct 42808583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 159 - 241
Target Start/End: Complemental strand, 24200704 - 24200622
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 241  Q
    |||| ||||||||||||||||| |||||| |||||||| ||||||| ||||| | | |||||| |||||||||||||||||||    
T  24200704 ctgcgtacaatacaccaaaaatggtgggaacccttcccggaccctgagtatgtgagagctttagtgcaccgggttgccctttt 24200622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 160 - 242
Target Start/End: Complemental strand, 31158519 - 31158437
Alignment:
Q  160 tgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttt 242  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||||||||| | |||||| | |||| | ||| |||||||    
T  31158519 tgcatacaataaaccaaaaatggtgggaccccttcccagaccctgcgtatgcgggagctttagtacacctgattgtccttttt 31158437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 159 - 241
Target Start/End: Complemental strand, 8455395 - 8455315
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 241  Q
    |||| ||||||||||||||  | ||||||||||||||| ||||||||||||||  | |||||| |||||||||||||||||||    
T  8455395 ctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcgtatgccggagctttagtgcaccgggttgccctttt 8455315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 177 - 243
Target Start/End: Original strand, 14444800 - 14444866
Alignment:
Q  177 aaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 243  Q
    |||| ||||||||||||||| ||||||||||||||| | |||||| |||||| ||||||||||||||    
T  14444800 aaatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccaggttgccctttttt 14444866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 159 - 243
Target Start/End: Complemental strand, 25249817 - 25249735
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 243  Q
    |||| ||||||||||||||  | |||||| ||||||||  |||||||||||||| | |||||| |||||||||||||||||||||    
T  25249817 ctgcgtacaatacaccaaa--tggtgggatcccttcccgaaccctgcgtatgcgtgagctttagtgcaccgggttgccctttttt 25249735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 159 - 243
Target Start/End: Original strand, 36871548 - 36871629
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 243  Q
    |||| ||||||||||||||  | ||||||||||||||| |||| |||||||||| | |||||| |||||||||||||||||||||    
T  36871548 ctgcgtacaatacaccaaa--tggtgggaccccttcccggacc-tgcgtatgcgggagctttagtgcaccgggttgccctttttt 36871629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 177 - 241
Target Start/End: Original strand, 44643595 - 44643659
Alignment:
Q  177 aaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 241  Q
    |||| ||||||||||||||||||||||||||||||| | || ||| ||||||||| |||||||||    
T  44643595 aaatggtgggaccccttcccagaccctgcgtatgcgggagccttagtgcaccgggctgccctttt 44643659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 159 - 241
Target Start/End: Original strand, 11514492 - 11514571
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 241  Q
    |||| ||||||||||||||  | ||||||||| ||||||||||||||||||||| | |||||| |||||||| ||||||||||    
T  11514492 ctgcgtacaatacaccaaa--tggtgggaccc-ttcccagaccctgcgtatgcgggagctttagtgcaccggattgccctttt 11514571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 182 - 245
Target Start/End: Original strand, 34766332 - 34766395
Alignment:
Q  182 gtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttttat 245  Q
    ||||||||||||||| ||||||||||||||| | |||||| |||| |||||| |||||||||||    
T  34766332 gtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaacgggtttcccttttttat 34766395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 241
Target Start/End: Complemental strand, 21779335 - 21779260
Alignment:
Q  164 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 241  Q
    ||||||||||||||  | ||||||||||||||| |||||||| |||||| | ||| || |||||||||||||||||||    
T  21779335 tacaatacaccaaa--tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttt 21779260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 182 - 240
Target Start/End: Complemental strand, 25079775 - 25079717
Alignment:
Q  182 gtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 240  Q
    ||||||||||||||| ||||||||||||||  | |||||| ||||||||||||||||||    
T  25079775 gtgggaccccttcccggaccctgcgtatgcaagagctttagtgcaccgggttgcccttt 25079717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 164 - 241
Target Start/End: Original strand, 5841089 - 5841166
Alignment:
Q  164 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 241  Q
    ||||||||| ||| ||| ||||||||||||||| ||||| || |||||| | |||||| ||||||| |||||||||||    
T  5841089 tacaatacatcaataatggtgggaccccttcccggaccccgcatatgcgggagctttagtgcaccgagttgccctttt 5841166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 239
Target Start/End: Complemental strand, 40579807 - 40579750
Alignment:
Q  182 gtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctt 239  Q
    ||||||||||||||| ||||||| ||||||| | |||||| |||||||||||||||||    
T  40579807 gtgggaccccttcccggaccctgagtatgcgggagctttagtgcaccgggttgccctt 40579750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 182 - 241
Target Start/End: Original strand, 34080178 - 34080237
Alignment:
Q  182 gtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 241  Q
    ||||||||||||||| |||||||| |||||| | | |||| |||||||||||||||||||    
T  34080178 gtgggaccccttcccggaccctgcatatgcgggagttttagtgcaccgggttgccctttt 34080237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 241
Target Start/End: Original strand, 22371199 - 22371248
Alignment:
Q  192 ttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 241  Q
    ||||| ||||||||||||||| | |||||| |||||||||||||||||||    
T  22371199 ttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttt 22371248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 242
Target Start/End: Complemental strand, 26684683 - 26684618
Alignment:
Q  177 aaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttt 242  Q
    |||| |||||||| ||||||  |||||||||||||| | ||||||||||||||| ||| |||||||    
T  26684683 aaatggtgggacctcttcccgaaccctgcgtatgcgggagctttaatgcaccggattgtccttttt 26684618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 160
Target Start/End: Complemental strand, 26827039 - 26826982
Alignment:
Q  108 cccatttctatagttgggcctctcgggccc-----gggccggcccatttgacacctct 160  Q
    |||||||||||||| |||||||||||||||     |||||||||||||||||||||||    
T  26827039 cccatttctatagtcgggcctctcgggcccgggctgggccggcccatttgacacctct 26826982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 164 - 240
Target Start/End: Complemental strand, 40762308 - 40762234
Alignment:
Q  164 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 240  Q
    ||||||||||||||  | ||||||||| ||||  ||||||||||||| | | |||||| ||||||||||||||||||    
T  40762308 tacaatacaccaaa--tggtgggaccctttcctggaccctgcgtatgtgggagctttagtgcaccgggttgcccttt 40762234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 243
Target Start/End: Original strand, 41409939 - 41410000
Alignment:
Q  182 gtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 243  Q
    ||||||||||||||| |||||||| |||||| | |||| | |||||||||||||||| ||||    
T  41409939 gtgggaccccttcccggaccctgcatatgcgggagcttcagtgcaccgggttgccctctttt 41410000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 105 - 158
Target Start/End: Original strand, 44089183 - 44089236
Alignment:
Q  105 tggcccatttctatagttgggcctctcgggcccgggccggcccatttgacacct 158  Q
    |||||||||| |||||| |||||||||||| ||||||| | |||||||||||||    
T  44089183 tggcccatttatatagtcgggcctctcggggccgggccaggccatttgacacct 44089236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 228
Target Start/End: Complemental strand, 44449463 - 44449395
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcacc 228  Q
    |||| ||||||||||||||| ||||||||||||||||| |||||||||| || | | | |||||||||||    
T  44449463 ctgcgtacaatacaccaaaa-tagtgggaccccttcccggaccctgcgtttgtgggagttttaatgcacc 44449395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 8575975 - 8576030
Alignment:
Q  185 ggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 240  Q
    |||||||||||| ||||||||||||| | | |||||| |||||| |||||||||||    
T  8575975 ggaccccttcccggaccctgcgtatgtgggagctttagtgcaccaggttgcccttt 8576030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 14530325 - 14530384
Alignment:
Q  18 acgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctacgtacaat 76  Q
    |||||||||  ||||||||||| |||||| |||||||| | |||||||||||||||||||    
T  14530325 acgggttcaagtcctggaaacagcctcttgtataaaaaacagggtaaggctacgtacaat 14530384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 182 - 241
Target Start/End: Complemental strand, 39914363 - 39914305
Alignment:
Q  182 gtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 241  Q
    ||||||||||||||  ||||||||||||||| | |||||| |||| ||||||||||||||    
T  39914363 gtgggaccccttcct-gaccctgcgtatgcgggagctttagtgcatcgggttgccctttt 39914305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 244
Target Start/End: Original strand, 17668058 - 17668141
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttta 244  Q
    |||| ||||||||||||||  | |||| |||||||| |  |||||||||||  | | |||||| ||||||||||||||||||||||    
T  17668058 ctgcgtacaatacaccaaa--tggtggaaccccttctcgaaccctgcgtatatgggagctttagtgcaccgggttgccctttttta 17668141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 212
Target Start/End: Complemental strand, 32781367 - 32781316
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcg 212  Q
    |||| ||||||||||||||  | ||||||||||||||||||||||| |||||||    
T  32781367 ctgcgtacaatacaccaaa--tggtgggaccccttcccagaccctgtgtatgcg 32781316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 175 - 240
Target Start/End: Original strand, 14544136 - 14544201
Alignment:
Q  175 aaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 240  Q
    |||||| || |||||||||||  ||||||||||||||| | |||||| ||||||  ||||||||||    
T  14544136 aaaaatggtcggaccccttccgggaccctgcgtatgcgggagctttagtgcaccaagttgcccttt 14544201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 177 - 242
Target Start/End: Original strand, 17896332 - 17896397
Alignment:
Q  177 aaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttt 242  Q
    |||| ||||||||||||| | ||||||||||||| | | |||||| |||| || ||||||||||||    
T  17896332 aaatggtgggaccccttctcggaccctgcgtatgtgggagctttagtgcatcgagttgcccttttt 17896397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 164 - 240
Target Start/End: Original strand, 23397825 - 23397899
Alignment:
Q  164 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 240  Q
    ||||||||||||||  | ||||||||||||| | |||||| | |||||| | ||| || ||||||||||||||||||    
T  23397825 tacaatacaccaaa--tggtgggaccccttctcggaccctacatatgcgggagctctagtgcaccgggttgcccttt 23397899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 243
Target Start/End: Complemental strand, 24860067 - 24859985
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 243  Q
    |||| ||||||||||||||  | || | |||||||| | ||||||||||||||| | |||||| |||||||| ||||| ||||||    
T  24860067 ctgcgtacaatacaccaaa--tggtagaaccccttctcggaccctgcgtatgcgggagctttagtgcaccggattgccttttttt 24859985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 211
Target Start/End: Original strand, 24890467 - 24890517
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgc 211  Q
    ||||||||||||||||||   | ||||||||||||||| ||||||||||||||    
T  24890467 ctgcatacaatacaccaat--tggtgggaccccttcccggaccctgcgtatgc 24890517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 124962 - 124918
Alignment:
Q  192 ttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcc 236  Q
    ||||| ||||||||||||||| | |||||| ||||||||||||||    
T  124962 ttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcc 124918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 243
Target Start/End: Original strand, 7214590 - 7214674
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 243  Q
    |||| |||||||||| |||||| ||| || |||||| | ||| ||||||||||| | | |||| |||||| ||||||| ||||||    
T  7214590 ctgcgtacaatacacaaaaaatggtgagatcccttctcggacactgcgtatgcgagagttttagtgcaccaggttgccttttttt 7214674  T

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Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 243
Target Start/End: Original strand, 25641562 - 25641639
Alignment:
Q  164 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 243  Q
    ||||||||||||||  | |||||||||||||||  | |||||||||||| | |||||| || ||||| ||| ||||||||    
T  25641562 tacaatacaccaaa--ttgtgggaccccttcccgaatcctgcgtatgcgagagctttagtgaaccggattgtcctttttt 25641639  T

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Target: chr5 (Bit Score: 55; Significance: 1e-22; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 159 - 241
Target Start/End: Original strand, 38879637 - 38879719
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 241  Q
    |||| ||||||||||||| ||| ||||||||||||||| ||||||||||||||| | |||||| |||||||||||||||||||    
T  38879637 ctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttt 38879719  T

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Target: chr5; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 159 - 242
Target Start/End: Original strand, 43334259 - 43334341
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttt 242  Q
    |||| ||||||||||||||||| ||||||||||||||| ||||||||| ||||| | |||||| ||||||||||||||||||||    
T  43334259 ctgcgtacaatacaccaaaaatggtgggaccccttcccggaccctgcg-atgcgggagctttagtgcaccgggttgcccttttt 43334341  T

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Target: chr5; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 162 - 239
Target Start/End: Complemental strand, 12006406 - 12006329
Alignment:
Q  162 catacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctt 239  Q
    ||||||||||||||| ||| |||||||||||||||||||||||| |||||| | |||||| ||||||| |||||||||    
T  12006406 catacaatacaccaataatggtgggaccccttcccagaccctgcctatgcgggagctttagtgcaccgtgttgccctt 12006329  T

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Target: chr5; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 159 - 241
Target Start/End: Complemental strand, 4619185 - 4619103
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 241  Q
    |||| ||||||||||||| ||| ||||||||||||||| ||||| || |||||| | |||||| |||||||||||||||||||    
T  4619185 ctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgagagctttagtgcaccgggttgccctttt 4619103  T

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Target: chr5; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 164 - 241
Target Start/End: Original strand, 16957375 - 16957450
Alignment:
Q  164 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 241  Q
    ||||||||||||||  | ||||||||||||||| ||||||||||||||| | |||||| |||||||||||||||||||    
T  16957375 tacaatacaccaaa--tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttt 16957450  T

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Target: chr5; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 159 - 240
Target Start/End: Complemental strand, 13801848 - 13801767
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 240  Q
    |||| ||||||||||||| ||| ||||||||||||||| ||||| || |||||| | |||||| ||||||||||||||||||    
T  13801848 ctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgagagctttagtgcaccgggttgcccttt 13801767  T

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Target: chr5; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 159 - 243
Target Start/End: Original strand, 24448946 - 24449028
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 243  Q
    |||| ||||||||||||||  | ||||||||||||||| ||||||||||||||  | |||||| |||||||||||||||||||||    
T  24448946 ctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcgtatgcaggagctttagtgcaccgggttgccctttttt 24449028  T

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Target: chr5; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 169 - 240
Target Start/End: Original strand, 25622524 - 25622595
Alignment:
Q  169 tacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 240  Q
    |||||||| ||| ||||||||||||||| ||||||||||||||| | |||||| |||||||| |||||||||    
T  25622524 tacaccaataatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccggattgcccttt 25622595  T

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Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 159 - 241
Target Start/End: Original strand, 27328808 - 27328890
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 241  Q
    |||| ||||||||||||| ||| |||||||||||||||  |||||||||||||| | ||||||||||| ||| ||||| ||||    
T  27328808 ctgcgtacaatacaccaataatggtgggaccccttcccgaaccctgcgtatgcgggagctttaatgcatcggattgccttttt 27328890  T

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Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 159 - 241
Target Start/End: Original strand, 32703478 - 32703558
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 241  Q
    |||| ||||||||||||||  | ||||||||||||||| |||||||| |||||| | ||| || |||||||||||||||||||    
T  32703478 ctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttt 32703558  T

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Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 182 - 241
Target Start/End: Original strand, 39801593 - 39801652
Alignment:
Q  182 gtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 241  Q
    |||||||||||||||||||||| |||||||| | |||||| |||||||||||||| ||||    
T  39801593 gtgggaccccttcccagaccctacgtatgcgggagctttagtgcaccgggttgccatttt 39801652  T

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Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 243
Target Start/End: Complemental strand, 16028682 - 16028621
Alignment:
Q  182 gtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 243  Q
    ||||||||||||||| |||||||| |||||| | ||| || |||||||||||||||||||||    
T  16028682 gtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttttt 16028621  T

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Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 159 - 242
Target Start/End: Complemental strand, 8170063 - 8169982
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttt 242  Q
    |||| ||||||||||||||  | ||||||||||||||| |||||||| |||||| | | || | ||||||||||||||||||||    
T  8170063 ctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcatatgcgggagtttcagtgcaccgggttgcccttttt 8169982  T

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Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 20135660 - 20135740
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctt 239  Q
    |||| ||||||||||||| ||| ||||||||||||||| ||||| || |||||  | |||| | |||||||||||||||||    
T  20135660 ctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcaggagcttcagtgcaccgggttgccctt 20135740  T

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Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 241
Target Start/End: Original strand, 41014374 - 41014454
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 241  Q
    |||| ||||||||||||||  | ||||||||||||||  ||||| || |||||| | |||||| |||||||||||||||||||    
T  41014374 ctgcgtacaatacaccaaa--tggtgggaccccttcctggaccccgcatatgcgggagctttagtgcaccgggttgccctttt 41014454  T

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Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 159 - 241
Target Start/End: Original strand, 29334451 - 29334532
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 241  Q
    |||| |||||||||||| || | ||||||||| ||||| ||||||||||||| | |  ||||||||||||||| |||||||||    
T  29334451 ctgcgtacaatacaccagaa-tggtgggacccattcccggaccctgcgtatgtgggatctttaatgcaccgggctgccctttt 29334532  T

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Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 159 - 240
Target Start/End: Complemental strand, 34154893 - 34154814
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 240  Q
    |||| ||||||||||||||  | ||||||||||||||| |||||||| ||||||   ||| || ||||||||||||||||||    
T  34154893 ctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcatatgcggtagctctagtgcaccgggttgcccttt 34154814  T

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Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 221
Target Start/End: Complemental strand, 10306548 - 10306493
Alignment:
Q  165 acaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggcttta 221  Q
    |||||||||||||| | ||||||||||||||| ||||||||||||||| | ||||||    
T  10306548 acaatacaccaaaa-tggtgggaccccttcccggaccctgcgtatgcgggagcttta 10306493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 240
Target Start/End: Complemental strand, 12575735 - 12575660
Alignment:
Q  164 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 240  Q
    ||||||||||||||| | ||||||||||||||  ||||||||||||||  | |||||  ||||||||| ||||||||    
T  12575735 tacaatacaccaaaa-tggtgggaccccttcctggaccctgcgtatgcaggagctttggtgcaccgggctgcccttt 12575660  T

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Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 189 - 241
Target Start/End: Original strand, 32354211 - 32354263
Alignment:
Q  189 cccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 241  Q
    |||||||| ||||||| ||||||| | |||||| |||||||||||||||||||    
T  32354211 cccttcccggaccctgtgtatgcgggagctttagtgcaccgggttgccctttt 32354263  T

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Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 245
Target Start/End: Complemental strand, 11657779 - 11657694
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttttat 245  Q
    |||||||||||||||| ||||| |||||||||||||||  |||||||  | ||| |  ||||| | ||||||| |||||||||||||    
T  11657779 ctgcatacaatacacc-aaaatggtgggaccccttcccgaaccctgcacacgcgggaactttagttcaccgggctgcccttttttat 11657694  T

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Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 240
Target Start/End: Complemental strand, 16880726 - 16880647
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 240  Q
    |||| ||||||||||||||  | ||| |||| |||||| |||| |||||||||| | |||||| ||||||||||| ||||||    
T  16880726 ctgcgtacaatacaccaaa--tggtgtgaccacttcccggaccatgcgtatgcgggagctttagtgcaccgggtttcccttt 16880647  T

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Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 241
Target Start/End: Complemental strand, 28516513 - 28516432
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 241  Q
    |||| ||||||||| ||||| | ||||||||| ||||||||||||||| ||||  | |||||| || ||| ||||||||||||    
T  28516513 ctgcgtacaatacatcaaaa-tggtgggacccattcccagaccctgcgcatgcaggagctttagtggaccaggttgccctttt 28516432  T

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Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 240
Target Start/End: Complemental strand, 30877622 - 30877564
Alignment:
Q  182 gtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 240  Q
    ||||||||||||||| |||||||| |||| | | ||| || ||||||||||||||||||    
T  30877622 gtgggaccccttcccggaccctgcatatgtgggagctctagtgcaccgggttgcccttt 30877564  T

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Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 243
Target Start/End: Original strand, 35710383 - 35710449
Alignment:
Q  177 aaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 243  Q
    |||| ||||||||||||||| || | ||| |||||| | ||| || |||||||||||||||||||||    
T  35710383 aaatggtgggaccccttcccggaacatgcatatgcgggagctctagtgcaccgggttgccctttttt 35710449  T

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Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 231
Target Start/End: Original strand, 43574678 - 43574732
Alignment:
Q  177 aaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccggg 231  Q
    |||| ||||||||||||||| ||||||||||||||| | ||||||  ||||||||    
T  43574678 aaatggtgggaccccttcccggaccctgcgtatgcgggagctttagagcaccggg 43574732  T

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Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 176 - 237
Target Start/End: Complemental strand, 21784396 - 21784335
Alignment:
Q  176 aaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccc 237  Q
    ||||| |||||||||||| || ||||||||||||||| | | |||| ||||||| |||||||    
T  21784396 aaaatggtgggacccctttccggaccctgcgtatgcgggaggtttagtgcaccgagttgccc 21784335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 240
Target Start/End: Original strand, 22187341 - 22187422
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 240  Q
    |||| |||||||||||||||| | || |||||||||||| ||||| | |||||  | |||||| |||| | |||||||||||    
T  22187341 ctgcgtacaatacaccaaaaacaatgagaccccttcccaaaccctacatatgcaggagctttagtgcatcaggttgcccttt 22187422  T

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Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 108 - 141
Target Start/End: Original strand, 34375172 - 34375205
Alignment:
Q  108 cccatttctatagttgggcctctcgggcccgggc 141  Q
    |||||||||||||| |||||||||||||||||||    
T  34375172 cccatttctatagtcgggcctctcgggcccgggc 34375205  T

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Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 108 - 141
Target Start/End: Original strand, 35540634 - 35540667
Alignment:
Q  108 cccatttctatagttgggcctctcgggcccgggc 141  Q
    |||||||||||||| |||||||||||||||||||    
T  35540634 cccatttctatagtcgggcctctcgggcccgggc 35540667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 231
Target Start/End: Complemental strand, 209007 - 208936
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccggg 231  Q
    |||||| ||||||||||||| | ||||||||||||||  ||||||| ||||||  | |||||| |||||||||    
T  209007 ctgcattcaatacaccaaaa-tggtgggaccccttcctggaccctgggtatgcaagagctttagtgcaccggg 208936  T

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Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 239
Target Start/End: Complemental strand, 29184118 - 29184062
Alignment:
Q  183 tgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctt 239  Q
    |||||| ||||  |||||| |||||||||| | |||||| |||||||||||||||||    
T  29184118 tgggactccttgtcagaccatgcgtatgcgggagctttagtgcaccgggttgccctt 29184062  T

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Target: chr3 (Bit Score: 55; Significance: 1e-22; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 159 - 241
Target Start/End: Complemental strand, 13628871 - 13628789
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 241  Q
    |||| ||||||||||||| ||| ||||||||||||||| ||||||||||||||| | |||||| |||||||||||||||||||    
T  13628871 ctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttt 13628789  T

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Target: chr3; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 159 - 245
Target Start/End: Complemental strand, 40272891 - 40272807
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttttat 245  Q
    |||| ||||||||||||||  | ||||||||||||||| ||||||||||||||| | |||||| |||||||||||||||||||||||    
T  40272891 ctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttttttat 40272807  T

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Target: chr3; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 160 - 242
Target Start/End: Complemental strand, 5173799 - 5173717
Alignment:
Q  160 tgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttt 242  Q
    ||||| ||||||||||||||| ||||| ||||||||| |||| |||||||||| | |||||| ||||||||||||||||||||    
T  5173799 tgcatgcaatacaccaaaaatggtggggccccttcccggaccttgcgtatgcgggagctttagtgcaccgggttgcccttttt 5173717  T

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Target: chr3; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 159 - 240
Target Start/End: Complemental strand, 45786295 - 45786214
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 240  Q
    |||| ||||||||||||||||| ||||||||||||||| ||||||||| ||||  | |||||| ||||||||||||||||||    
T  45786295 ctgcgtacaatacaccaaaaatggtgggaccccttcccggaccctgcgaatgctggagctttagtgcaccgggttgcccttt 45786214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 159 - 243
Target Start/End: Complemental strand, 46421116 - 46421031
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaa-tgcaccgggttgccctttttt 243  Q
    |||| ||||||||||||| ||| ||||||||||||||| ||||||||||||||| | ||||||| |||||||| ||||||||||||    
T  46421116 ctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgtatgcgggagctttaagtgcaccggtttgccctttttt 46421031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 242
Target Start/End: Original strand, 54484769 - 54484850
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttt 242  Q
    |||| ||||||||||||||  | ||||||||||||||| ||||||||||||||| | |||||| ||||||||||||||||||||    
T  54484769 ctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttttt 54484850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 164 - 243
Target Start/End: Complemental strand, 13730678 - 13730599
Alignment:
Q  164 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 243  Q
    ||||||||||||| ||| ||||||||||||||| ||||| || |||||| | |||||| |||||||||||||||||||||    
T  13730678 tacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgggagctttagtgcaccgggttgccctttttt 13730599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 159 - 241
Target Start/End: Complemental strand, 29366801 - 29366719
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 241  Q
    |||| ||||||||||||| ||| ||||||||||||||| ||||||||||||| | | |||||| ||||| |||||||||||||    
T  29366801 ctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgtatgtgggagctttagtgcactgggttgccctttt 29366719  T

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Target: chr3; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 159 - 240
Target Start/End: Complemental strand, 10795504 - 10795423
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 240  Q
    |||| ||||||||||||||||| ||||||||||||||  ||||||||||||||| | |||| | |||||| |||||||||||    
T  10795504 ctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgcgggagcttcagtgcaccaggttgcccttt 10795423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 159 - 244
Target Start/End: Complemental strand, 49013554 - 49013469
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttta 244  Q
    |||| ||||||||||||| ||| ||||||||||||||| ||||| || || ||| | |||||| ||||||||||||||||||||||    
T  49013554 ctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatacgcgggagctttagtgcaccgggttgccctttttta 49013469  T

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Target: chr3; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 159 - 238
Target Start/End: Complemental strand, 353430 - 353351
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccct 238  Q
    |||| ||||||||||||| ||| ||||||||||||||| ||||| || |||||| | |||||| ||||||||||||||||    
T  353430 ctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgggagctttagtgcaccgggttgccct 353351  T

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Target: chr3; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 175 - 242
Target Start/End: Original strand, 516504 - 516571
Alignment:
Q  175 aaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttt 242  Q
    |||||| | ||||||||||||| ||||||||||||||| | |||||| ||||||||||||||||||||    
T  516504 aaaaatggcgggaccccttccccgaccctgcgtatgcgggagctttagtgcaccgggttgcccttttt 516571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 164 - 241
Target Start/End: Complemental strand, 12914109 - 12914034
Alignment:
Q  164 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 241  Q
    ||||||||||||||  | ||| |||||||||||||||||||| |||||| | |||| |||||||||||||||||||||    
T  12914109 tacaatacaccaaa--tggtgagaccccttcccagaccctgcatatgcgggagcttcaatgcaccgggttgccctttt 12914034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 159 - 212
Target Start/End: Complemental strand, 45139557 - 45139505
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcg 212  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  45139557 ctgcatacaatacaccaaaaatggtgggaccccttcccaga-cctgcgtatgcg 45139505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 159 - 243
Target Start/End: Complemental strand, 52926298 - 52926216
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 243  Q
    |||| ||||||||||||||  | ||||||| ||||||| ||||||||||||||| | ||||||  ||||||||||||||||||||    
T  52926298 ctgcgtacaatacaccaaa--tggtgggacaccttcccggaccctgcgtatgcgggagctttagcgcaccgggttgccctttttt 52926216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 164 - 243
Target Start/End: Complemental strand, 8247763 - 8247683
Alignment:
Q  164 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaa-tgcaccgggttgccctttttt 243  Q
    ||||||||||||| ||| ||||||| ||||||| ||||||||||||||| | ||||||| ||||| |||||||||| ||||    
T  8247763 tacaatacaccaataatggtgggactccttcccggaccctgcgtatgcgggagctttaagtgcactgggttgccctatttt 8247683  T

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Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 105 - 160
Target Start/End: Complemental strand, 9144865 - 9144810
Alignment:
Q  105 tggcccatttctatagttgggcctctcgggcccgggccggcccatttgacacctct 160  Q
    ||||||||||||||||   |||||||||||| ||||||||||||||||||||||||    
T  9144865 tggcccatttctataggcaggcctctcgggctcgggccggcccatttgacacctct 9144810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 159 - 245
Target Start/End: Original strand, 15797298 - 15797382
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttttat 245  Q
    |||| ||||||||||||||  | ||||||||||||||| |||||||| |||| | | ||| || |||||||||||||||||||||||    
T  15797298 ctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcatatgtgggagctctagtgcaccgggttgcccttttttat 15797382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 159 - 241
Target Start/End: Complemental strand, 25517249 - 25517169
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 241  Q
    |||| ||||||||||  ||||| ||||||||||||||| || |||||||||||  | |||||| |||||||||||||||||||    
T  25517249 ctgcgtacaatacac--aaaatggtgggaccccttcccggatcctgcgtatgctggagctttagtgcaccgggttgccctttt 25517169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 159 - 242
Target Start/End: Complemental strand, 53996645 - 53996563
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttt 242  Q
    |||| ||||||||||||||| | ||||||||||||||| ||| ||||||||| | | |||||| ||||||||| ||||||||||    
T  53996645 ctgcttacaatacaccaaaa-tggtgggaccccttccctgacactgcgtatgtgggagctttagtgcaccgggctgcccttttt 53996563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 243
Target Start/End: Complemental strand, 24851364 - 24851298
Alignment:
Q  177 aaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 243  Q
    |||| ||||||||||||||| || ||||| |||||| | |||||| |||||||||||||||||||||    
T  24851364 aaatggtgggaccccttcccggatcctgcatatgcgggagctttagtgcaccgggttgccctttttt 24851298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 240
Target Start/End: Original strand, 14987035 - 14987116
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 240  Q
    |||| ||||||||||||| ||| ||||||||| ||||| |||| ||| |||||| | |||||| ||||||||||| ||||||    
T  14987035 ctgcgtacaatacaccaataatggtgggacccattcccggaccttgcatatgcgggagctttagtgcaccgggtttcccttt 14987116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 22122996 - 22122918
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctt 239  Q
    |||| ||||||||||||||  | ||||||||||||||| |||||||| |||||| | ||| || |||||||||||||||||    
T  22122996 ctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcatatgcgagagctctagtgcaccgggttgccctt 22122918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 22609843 - 22609921
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctt 239  Q
    |||| ||||||||||||||  | ||||||||||||||| |||| |||||||||| | |||| | |||||||||||||||||    
T  22609843 ctgcgtacaatacaccaaa--tggtgggaccccttcccggaccttgcgtatgcgggagcttcagtgcaccgggttgccctt 22609921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 243
Target Start/End: Original strand, 26869784 - 26869866
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 243  Q
    |||| ||||||||||||||  | |||||||||||| || |||| |||||||||| | |||||  |||||||||||||||||||||    
T  26869784 ctgcgtacaatacaccaaa--tggtgggaccccttgccggaccatgcgtatgcgggagctttggtgcaccgggttgccctttttt 26869866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 164 - 240
Target Start/End: Original strand, 39203597 - 39203671
Alignment:
Q  164 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 240  Q
    ||||||||||||||  | ||||||||||||||| |||| ||| |||||| | |||||| ||||||||||||||||||    
T  39203597 tacaatacaccaaa--tggtgggaccccttcccggaccttgcatatgcgggagctttagtgcaccgggttgcccttt 39203671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 159 - 242
Target Start/End: Original strand, 1217166 - 1217247
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttt 242  Q
    |||| ||||||||||||||  | | ||||||||||||| |||||||| |||||| | ||| || ||||||||||||||||||||    
T  1217166 ctgcgtacaatacaccaaa--tggcgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgcccttttt 1217247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 10484671 - 10484615
Alignment:
Q  185 ggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 241  Q
    |||||||||||  ||||||||||||||| | |||||| |||||||||||||||||||    
T  10484671 ggaccccttcctggaccctgcgtatgcgggagctttagtgcaccgggttgccctttt 10484615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 159 - 242
Target Start/End: Complemental strand, 34771443 - 34771362
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttt 242  Q
    |||| ||||||||||||||  | ||||||||||||||| |||||||| |||||| | ||| || ||||||||| ||||||||||    
T  34771443 ctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggctgcccttttt 34771362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 105 - 160
Target Start/End: Complemental strand, 50462768 - 50462708
Alignment:
Q  105 tggcccatttctatagttgggcctctcgggc-----ccgggccggcccatttgacacctct 160  Q
    ||||||||||||||||| |||||||||||||     |||||||||||||||||||||||||    
T  50462768 tggcccatttctatagtcgggcctctcgggcttgggccgggccggcccatttgacacctct 50462708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 243
Target Start/End: Original strand, 25944552 - 25944630
Alignment:
Q  164 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 243  Q
    ||||||||||||||| | ||||||||||||||| ||||||||||||| | | ||||||  ||||| || |||||||||||    
T  25944552 tacaatacaccaaaa-tggtgggaccccttccctgaccctgcgtatgtgggagctttagcgcaccaggctgccctttttt 25944630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 182 - 241
Target Start/End: Original strand, 30452894 - 30452953
Alignment:
Q  182 gtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 241  Q
    ||||||||||||||| |||||||| |||||| | ||| || |||||||||||||||||||    
T  30452894 gtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttt 30452953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 243
Target Start/End: Original strand, 47624208 - 47624259
Alignment:
Q  192 ttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 243  Q
    ||||| ||||||||||||||| | |||||| |||||||||||||||||||||    
T  47624208 ttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttttt 47624259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 198 - 244
Target Start/End: Complemental strand, 4495718 - 4495672
Alignment:
Q  198 gaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttta 244  Q
    ||||||||||||||| | |||||| ||||||||||||||||||||||    
T  4495718 gaccctgcgtatgcgggagctttagtgcaccgggttgccctttttta 4495672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 159 - 240
Target Start/End: Original strand, 31592925 - 31593004
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 240  Q
    |||| ||||||||||||||  | ||||||| ||||||| |||||||| |||||| | ||| || ||||||||||||||||||    
T  31592925 ctgcgtacaatacaccaaa--tggtgggactccttcccggaccctgcatatgcgggagctctagtgcaccgggttgcccttt 31593004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 160
Target Start/End: Complemental strand, 29322878 - 29322821
Alignment:
Q  108 cccatttctatagttgggcctctcgggc-----ccgggccggcccatttgacacctct 160  Q
    |||||||||||||| |||||||||||||     |||||||||||||||||||||||||    
T  29322878 cccatttctatagtcgggcctctcgggcttgggccgggccggcccatttgacacctct 29322821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 244
Target Start/End: Complemental strand, 829517 - 829438
Alignment:
Q  164 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttta 244  Q
    ||||||||||||||| | |||||||||||||||  |||||||||||||  | |||||| ||||||||  || |||||||||    
T  829517 tacaatacaccaaaa-tggtgggaccccttcccgaaccctgcgtatgcaggagctttagtgcaccggtctgtcctttttta 829438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 199 - 243
Target Start/End: Original strand, 40390357 - 40390401
Alignment:
Q  199 accctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 243  Q
    |||||||||||||| | |||||| |||||||||||||||||||||    
T  40390357 accctgcgtatgcgggagctttagtgcaccgggttgccctttttt 40390401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 230
Target Start/End: Complemental strand, 45948917 - 45948848
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgg 230  Q
    ||||||||||||||||||   | ||||||||||||| | ||||||||||||||| | |||||| ||||||||    
T  45948917 ctgcatacaatacaccaat--tggtgggaccccttctcggaccctgcgtatgcgggagctttagtgcaccgg 45948848  T

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Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 229
Target Start/End: Complemental strand, 6411901 - 6411833
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccg 229  Q
    |||| ||||||||||||||  |  ||||||||||||||||||| |||||||||| | |||||| |||||||    
T  6411901 ctgcgtacaatacaccaaa--tgatgggaccccttcccagaccttgcgtatgcgggagctttagtgcaccg 6411833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 241
Target Start/End: Original strand, 16735518 - 16735598
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 241  Q
    |||| ||||||||||||||  | ||||||||||||||| ||| |||||||||||   |||| | ||||| |||||||||||||    
T  16735518 ctgcgtacaatacaccaaa--tggtgggaccccttcccggacactgcgtatgcggtagcttcagtgcactgggttgccctttt 16735598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 198 - 241
Target Start/End: Complemental strand, 54032613 - 54032570
Alignment:
Q  198 gaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 241  Q
    ||||||||||||||| | |||||| |||||||||||||||||||    
T  54032613 gaccctgcgtatgcgggagctttagtgcaccgggttgccctttt 54032570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 243
Target Start/End: Original strand, 12525493 - 12525567
Alignment:
Q  169 tacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 243  Q
    |||||||||||| ||||||| |||||| |||||||| |||| || | |||| | |||||| |||||| |||||||    
T  12525493 tacaccaaaaatggtgggacaccttcctagaccctgtgtatacgggagcttcactgcaccaggttgctctttttt 12525567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 245
Target Start/End: Complemental strand, 54374425 - 54374340
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttttat 245  Q
    |||| |||||| |||||||| | ||||||||||||||| |||||||| |||||| | |||||| | |||| || |||| ||||||||    
T  54374425 ctgcgtacaatccaccaaaa-tggtgggaccccttcccggaccctgcatatgcgggagctttagttcaccaggctgccattttttat 54374340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 243
Target Start/End: Original strand, 26573226 - 26573287
Alignment:
Q  182 gtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 243  Q
    |||||||||| |||| ||||||||||||||| | |||||| |||||| || |||||| ||||    
T  26573226 gtgggaccccatcccggaccctgcgtatgcgtgagctttagtgcaccaggctgccctctttt 26573287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 243
Target Start/End: Original strand, 10300591 - 10300651
Alignment:
Q  183 tgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 243  Q
    |||||| |||||||||||||| |||||||| | ||||||||| || || ||||| ||||||    
T  10300591 tgggactccttcccagaccctacgtatgcgggagctttaatgtactggattgccttttttt 10300651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 160
Target Start/End: Complemental strand, 31372521 - 31372465
Alignment:
Q  109 ccatttctatagttgggcctctcgggc-----ccgggccggcccatttgacacctct 160  Q
    ||||||||||||| ||||||||||| |     |||||||||||||||||||||||||    
T  31372521 ccatttctatagtcgggcctctcggacccgagccgggccggcccatttgacacctct 31372465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 144
Target Start/End: Original strand, 55140549 - 55140585
Alignment:
Q  108 cccatttctatagttgggcctctcgggcccgggccgg 144  Q
    |||||||||||||| ||||||||||| ||||||||||    
T  55140549 cccatttctatagtcgggcctctcggacccgggccgg 55140585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 159 - 240
Target Start/End: Original strand, 59033 - 59114
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 240  Q
    |||| ||||||||||||||||| ||||||||||||||||||| ||||||||||| | |||||| |||| |||||||||||||    
T  59033 ctgcgtacaatacaccaaaaatggtgggaccccttcccagactctgcgtatgcgggagctttagtgcatcgggttgcccttt 59114  T

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Target: scaffold0258 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 182 - 242
Target Start/End: Complemental strand, 13082 - 13022
Alignment:
Q  182 gtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttt 242  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  13082 gtgggaccccttcccagaccctgcgtatgcgggggctttagtgcaccgggttgcccttttt 13022  T

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Target: chr4 (Bit Score: 53; Significance: 2e-21; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 243
Target Start/End: Complemental strand, 20639738 - 20639655
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 243  Q
    |||| ||||||||||||||| | ||||||||||||||| ||||||||||||||| | |||||| |||||||||||||||||||||    
T  20639738 ctgcgtacaatacaccaaaa-tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttttt 20639655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 243
Target Start/End: Complemental strand, 30352661 - 30352577
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 243  Q
    |||| ||||||||||||||||| ||||||||||||| | ||||||||||||||| | |||||| ||||||| |||||||||||||    
T  30352661 ctgcgtacaatacaccaaaaatggtgggaccccttctcggaccctgcgtatgcgggagctttagtgcaccgtgttgccctttttt 30352577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 163 - 243
Target Start/End: Complemental strand, 33836564 - 33836484
Alignment:
Q  163 atacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 243  Q
    |||||||||||||| ||| ||||||||||||||| ||||||||||||||| | |||||| |||| ||||||||||||||||    
T  33836564 atacaatacaccaataatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaacgggttgccctttttt 33836484  T

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Target: chr4; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 164 - 243
Target Start/End: Original strand, 23501848 - 23501927
Alignment:
Q  164 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 243  Q
    ||||||||||||| ||| ||||||||||||||| |||||||| |||||| | |||||| |||||||||||||||||||||    
T  23501848 tacaatacaccaataatggtgggaccccttcccggaccctgcatatgcgggagctttagtgcaccgggttgccctttttt 23501927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 171 - 240
Target Start/End: Complemental strand, 44363199 - 44363130
Alignment:
Q  171 caccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 240  Q
    |||||||||| ||||||||||||||| ||||||||||||||| | |||||| ||||||||||||||||||    
T  44363199 caccaaaaatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 44363130  T

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Target: chr4; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 159 - 240
Target Start/End: Original strand, 20225130 - 20225211
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 240  Q
    |||| ||||||||||||| ||| ||||||||||||||| ||||| || |||||| | |||||| ||||||||||||||||||    
T  20225130 ctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgggagctttagtgcaccgggttgcccttt 20225211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 159 - 243
Target Start/End: Complemental strand, 16408682 - 16408598
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 243  Q
    |||| ||||||||||||| ||| |||| |||||||||| ||||| || |||||| | |||||| |||||||||||||||||||||    
T  16408682 ctgcgtacaatacaccaataatggtggaaccccttcccggaccccgcatatgcgggagctttagtgcaccgggttgccctttttt 16408598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 159 - 242
Target Start/End: Complemental strand, 13256480 - 13256397
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttt 242  Q
    |||| ||||||||||||| |||||||||||||||||||  |||| || | |||| | |||||| ||||||||||||||||||||    
T  13256480 ctgcgtacaatacaccaataatagtgggaccccttcccgaaccccgcatctgcgggagctttagtgcaccgggttgcccttttt 13256397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 159 - 241
Target Start/End: Original strand, 16911618 - 16911700
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 241  Q
    |||| ||||||||||||| ||| ||||||||||||||| ||||||||||| ||| | |||||| |  ||||||||||||||||    
T  16911618 ctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgtacgcgggagctttagtttaccgggttgccctttt 16911700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 159 - 237
Target Start/End: Original strand, 21647020 - 21647098
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccc 237  Q
    |||| ||||||| ||||| ||| ||||||||||||||||||||| || |||||| | |||||| |||||||||||||||    
T  21647020 ctgcgtacaatataccaataatggtgggaccccttcccagaccccgcatatgcgggagctttagtgcaccgggttgccc 21647098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 182 - 240
Target Start/End: Complemental strand, 38755966 - 38755908
Alignment:
Q  182 gtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 240  Q
    ||||||||||||||| ||||||||||||||| | |||||| ||||||||||||||||||    
T  38755966 gtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 38755908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 159 - 212
Target Start/End: Original strand, 16494273 - 16494326
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcg 212  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||| |||||||    
T  16494273 ctgcatacaatacaccaaaaatggtgggaccctttcccagaccctgtgtatgcg 16494326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 243
Target Start/End: Original strand, 32484310 - 32484371
Alignment:
Q  182 gtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 243  Q
    ||||||||||||||| |||||||| |||||| | |||||| |||||||||||||||||||||    
T  32484310 gtgggaccccttcccggaccctgcatatgcgggagctttagtgcaccgggttgccctttttt 32484371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 242
Target Start/End: Original strand, 5648314 - 5648395
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttt 242  Q
    |||| ||||||||||||||  | ||||||||||||||| ||||||||||||||| | |||| | ||||| ||||||||||||||    
T  5648314 ctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcgtatgcgggagcttcagtgcactgggttgcccttttt 5648395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 240
Target Start/End: Original strand, 11394924 - 11394987
Alignment:
Q  177 aaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 240  Q
    |||| |||||||||||| || ||||||||||||||| | |||||| ||||||||||||||||||    
T  11394924 aaatggtgggacccctttccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 11394987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 240
Target Start/End: Original strand, 11404651 - 11404714
Alignment:
Q  177 aaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 240  Q
    |||| |||||||||||| || ||||||||||||||| | |||||| ||||||||||||||||||    
T  11404651 aaatggtgggacccctttccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 11404714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 242
Target Start/End: Original strand, 25629110 - 25629186
Alignment:
Q  164 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttt 242  Q
    ||||||||||||||  | ||||||||||||||| |||||| | |||||| | |||||| ||||||||||||||||||||    
T  25629110 tacaatacaccaaa--tggtgggaccccttcccggaccctacatatgcgggagctttagtgcaccgggttgcccttttt 25629186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 240
Target Start/End: Original strand, 20225038 - 20225117
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 240  Q
    |||| ||||||||||||||  | ||||||||||||||| |||||||| |||||| | ||| || ||||||||||||||||||    
T  20225038 ctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgcccttt 20225117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 182 - 240
Target Start/End: Original strand, 25388253 - 25388311
Alignment:
Q  182 gtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 240  Q
    ||||||||||||||| ||||||||||||||  | |||||| ||||||||||||||||||    
T  25388253 gtgggaccccttcccggaccctgcgtatgcatgagctttagtgcaccgggttgcccttt 25388311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 240
Target Start/End: Complemental strand, 30690255 - 30690176
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 240  Q
    ||||||||||||||||||   | ||||||||||||||| ||||||||||||||| | |||||| |||||| || ||||||||    
T  30690255 ctgcatacaatacaccaat--tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccaggctgcccttt 30690176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 243
Target Start/End: Original strand, 38786681 - 38786747
Alignment:
Q  177 aaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 243  Q
    |||| ||||||||||||||| |||||||| |||||| | ||| || |||||||||||||||||||||    
T  38786681 aaatggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttttt 38786747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 40553991 - 40553937
Alignment:
Q  186 gaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 240  Q
    ||||||||||| ||||||||||||||| | |||||| ||||||||||||||||||    
T  40553991 gaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgcccttt 40553937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 182 - 240
Target Start/End: Original strand, 44718644 - 44718702
Alignment:
Q  182 gtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 240  Q
    ||||||||||||||||||||||||||||||| | ||||||   ||||||||||||||||    
T  44718644 gtgggaccccttcccagaccctgcgtatgcgggagctttagcacaccgggttgcccttt 44718702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 105 - 160
Target Start/End: Complemental strand, 49268805 - 49268746
Alignment:
Q  105 tggcccatttctatagttgggcctctcgggc----ccgggccggcccatttgacacctct 160  Q
    ||||||||||||||||| |||||||||||||    |||||||||||||||||||||||||    
T  49268805 tggcccatttctatagtcgggcctctcgggctaggccgggccggcccatttgacacctct 49268746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 6430705 - 6430627
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctt 239  Q
    |||| ||||||||||||||  | |||||||| |||||| ||||||||||||||| | ||||||  ||||||||||||||||    
T  6430705 ctgcgtacaatacaccaaa--tggtgggaccacttcccggaccctgcgtatgcgggagctttagcgcaccgggttgccctt 6430627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 243
Target Start/End: Complemental strand, 9987913 - 9987831
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 243  Q
    |||||||||||||||||||  | ||||||||||||||  |||| ||| |||||| | |||||||||||||||| |||| ||||||    
T  9987913 ctgcatacaatacaccaaa--tggtgggaccccttccttgaccttgcatatgcgggagctttaatgcaccgggctgccttttttt 9987831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 243
Target Start/End: Original strand, 10660460 - 10660544
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaa-tgcaccgggttgccctttttt 243  Q
    |||||||||||||||||| ||| ||| |||||||||| ||| |||||||||||| | ||||||| |||| |||||||||| |||||    
T  10660460 ctgcatacaatacaccaataatggtgagaccccttccaaga-cctgcgtatgcgggagctttaagtgcatcgggttgccccttttt 10660544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 243
Target Start/End: Original strand, 10874605 - 10874689
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaa-tgcaccgggttgccctttttt 243  Q
    |||||||||||||||||| ||| ||| |||||||||| ||| |||||||||||| | ||||||| |||| |||||||||| |||||    
T  10874605 ctgcatacaatacaccaataatggtgagaccccttccaaga-cctgcgtatgcgggagctttaagtgcatcgggttgccccttttt 10874689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 243
Target Start/End: Original strand, 30639435 - 30639517
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 243  Q
    |||| ||||||||||||||  | ||| ||||||||||| |||||||| |||||| | |||||| ||||| |||||||||||||||    
T  30639435 ctgcgtacaatacaccaaa--tggtgagaccccttcccggaccctgcatatgcgggagctttagtgcactgggttgccctttttt 30639517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 35532077 - 35532130
Alignment:
Q  190 ccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 243  Q
    ||||||| ||||||||||||||| | |||||| |||||||||||||||||||||    
T  35532077 ccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttttt 35532130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 159 - 243
Target Start/End: Complemental strand, 20908716 - 20908633
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 243  Q
    |||| ||||||||||||||| | |||||||||||||||  |||||||||||||| | |||||| |||||  || |||||||||||    
T  20908716 ctgcgtacaatacaccaaaa-tggtgggaccccttcccgaaccctgcgtatgcgggagctttagtgcacaaggctgccctttttt 20908633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 159 - 238
Target Start/End: Complemental strand, 29207977 - 29207900
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccct 238  Q
    |||| ||||||||||||||  | ||||||||||||||| |||||||| |||||| | ||| || ||||||||||||||||    
T  29207977 ctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccct 29207900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 159 - 243
Target Start/End: Complemental strand, 36816464 - 36816381
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 243  Q
    |||| ||||||||||||||||  ||||||| ||||||  ||||||| ||||||| | |||||| || ||||||||||||||||||    
T  36816464 ctgcgtacaatacaccaaaaag-gtgggactccttcctggaccctgtgtatgcgggagctttagtgtaccgggttgccctttttt 36816381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 159 - 242
Target Start/End: Original strand, 54175119 - 54175202
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggacccctt-cccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttt 242  Q
    |||| ||||||||||||||| | |||||||||||| ||| |||||||| |||||| | |||||| ||||||||| ||||||||||    
T  54175119 ctgcgtacaatacaccaaaa-tggtgggaccccttccccggaccctgcatatgcgggagctttagtgcaccgggctgcccttttt 54175202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 244
Target Start/End: Original strand, 35567242 - 35567309
Alignment:
Q  177 aaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttta 244  Q
    |||| |||||||||||||||  ||||||||| |||| | |||||| ||||||||| ||||||||||||    
T  35567242 aaatggtgggaccccttcccgaaccctgcgtctgcgggagctttagtgcaccgggctgccctttttta 35567309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 241
Target Start/End: Complemental strand, 51865117 - 51865037
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 241  Q
    |||| ||||||||||||||  | ||||| ||||||||| ||||||||||||||| | |||||| ||||||||  |||||||||    
T  51865117 ctgcgtacaatacaccaaa--tggtggggccccttcccggaccctgcgtatgcgggagctttattgcaccggactgccctttt 51865037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 164 - 239
Target Start/End: Complemental strand, 7909355 - 7909281
Alignment:
Q  164 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgg-gctttaatgcaccgggttgccctt 239  Q
    ||||||||||||||  | |||||||||||||||  |||||||||||||| || |||||| |||| ||||||||||||    
T  7909355 tacaatacaccaaa--tggtgggaccccttcccgaaccctgcgtatgcggggagctttagtgcatcgggttgccctt 7909281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 243
Target Start/End: Complemental strand, 11054227 - 11054145
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 243  Q
    |||| ||||||||||||||  | | || |||||||||| |||||||| |||||| | ||| || |||||||||||||||||||||    
T  11054227 ctgcgtacaatacaccaaa--tggcggaaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttttt 11054145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 160
Target Start/End: Complemental strand, 28972588 - 28972531
Alignment:
Q  108 cccatttctatagttgggcctctcgggccc-----gggccggcccatttgacacctct 160  Q
    |||||||||||||| |||||||||||||||     |||||||||||||||||||||||    
T  28972588 cccatttctatagtcgggcctctcgggcccgggctgggccggcccatttgacacctct 28972531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 40915884 - 40915962
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctt 239  Q
    |||| ||||||||||||||  | |||||| |||||||| ||||||||||||||| | |||| | |||||||| ||||||||    
T  40915884 ctgcgtacaatacaccaaa--tggtgggagcccttcccggaccctgcgtatgcgggagcttcagtgcaccggattgccctt 40915962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 243
Target Start/End: Original strand, 47444013 - 47444095
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 243  Q
    |||| ||||||||||||||  | ||||||||||||||| |||||||| |||||  | |||| | ||||| |||||||||||||||    
T  47444013 ctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcatatgcaggagcttcagtgcactgggttgccctttttt 47444095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 241
Target Start/End: Complemental strand, 47482918 - 47482849
Alignment:
Q  172 accaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 241  Q
    ||||||||| ||||||||||||||| ||||||||||||||| | |||||  |||| || | |||||||||    
T  47482918 accaaaaatggtgggaccccttcccggaccctgcgtatgcgggagctttggtgcaacgagctgccctttt 47482849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 243
Target Start/End: Complemental strand, 47528609 - 47528527
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 243  Q
    |||| ||||||||||||||  | ||||||||||||||| |||||||  |||| | | ||| || |||||||||||||||||||||    
T  47528609 ctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgaatatgtgggagctctagtgcaccgggttgccctttttt 47528527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 244
Target Start/End: Original strand, 54730314 - 54730391
Alignment:
Q  167 aatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttta 244  Q
    |||||||||| |||  ||| |||||||||| ||||||||||||||| | |||||| |||||||  || ||||||||||    
T  54730314 aatacaccaataatgatggaaccccttcccggaccctgcgtatgcgggagctttagtgcaccgaattaccctttttta 54730391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 160
Target Start/End: Complemental strand, 1763429 - 1763369
Alignment:
Q  105 tggcccatttctatagttgggcctctcgggc-----ccgggccggcccatttgacacctct 160  Q
    ||||||||||| ||||| |||||||||||||     |||||||||||||||||||||||||    
T  1763429 tggcccatttcaatagtcgggcctctcgggcccgagccgggccggcccatttgacacctct 1763369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 8473701 - 8473621
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccaga--ccctgcgtatgcgcgggctttaatgcaccgggttgccctt 239  Q
    |||||||||||||||||||  | ||||||||||||||| |   |||||| |||||| | |||||| |||||||||||||||||    
T  8473701 ctgcatacaatacaccaaa--tggtgggaccccttccccggacccctgcatatgcgggagctttagtgcaccgggttgccctt 8473621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 242
Target Start/End: Complemental strand, 9832392 - 9832311
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttt 242  Q
    |||| ||||||||||||||  | ||||||||||||||| |||||||| |||||  |  || || ||||||||||||||||||||    
T  9832392 ctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcatatgcaggaactctagtgcaccgggttgcccttttt 9832311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 241
Target Start/End: Original strand, 14983906 - 14983970
Alignment:
Q  177 aaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 241  Q
    |||| ||||||||||||||| ||||||||||||||| | |||||| || |||  |||||||||||    
T  14983906 aaatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgtaccatgttgccctttt 14983970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 240
Target Start/End: Original strand, 20405148 - 20405224
Alignment:
Q  164 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 240  Q
    |||||||||| || ||| ||||||||||||||| ||||| || |||||| | |||||| ||||  ||||||||||||    
T  20405148 tacaatacactaataatggtgggaccccttcccggaccccgcatatgcgggagctttagtgcattgggttgcccttt 20405224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 227
Target Start/End: Complemental strand, 41018868 - 41018807
Alignment:
Q  164 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcac 227  Q
    ||||||||||||||  |||||||||||||||||||||| ||||||||   |||||||| |||||    
T  41018868 tacaatacaccaaa--tagtgggaccccttcccagaccttgcgtatggaggggctttagtgcac 41018807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 242
Target Start/End: Complemental strand, 48598904 - 48598823
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttt 242  Q
    |||| ||||||||||||||  | ||||||||||||||| |||| ||| |||||  | ||| || ||||||||||||||||||||    
T  48598904 ctgcgtacaatacaccaaa--tggtgggaccccttcccggaccatgcatatgccggagctctagtgcaccgggttgcccttttt 48598823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 144
Target Start/End: Original strand, 6377622 - 6377661
Alignment:
Q  105 tggcccatttctatagttgggcctctcgggcccgggccgg 144  Q
    ||||||||||||||||| |||||||||||||||| |||||    
T  6377622 tggcccatttctatagtcgggcctctcgggcccgagccgg 6377661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 144
Target Start/End: Original strand, 28185587 - 28185626
Alignment:
Q  105 tggcccatttctatagttgggcctctcgggcccgggccgg 144  Q
    ||||||||||||||||| |||||||||||||||| |||||    
T  28185587 tggcccatttctatagtcgggcctctcgggcccgagccgg 28185626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 212
Target Start/End: Original strand, 8820585 - 8820615
Alignment:
Q  182 gtgggaccccttcccagaccctgcgtatgcg 212  Q
    |||||||||||||||||||||||||||||||    
T  8820585 gtgggaccccttcccagaccctgcgtatgcg 8820615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 243
Target Start/End: Original strand, 28494223 - 28494289
Alignment:
Q  177 aaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 243  Q
    |||| |||||||||||||||||| ||||| |||||| | ||| || ||||||||| |||| ||||||    
T  28494223 aaatggtgggaccccttcccagatcctgcatatgcgggagctctagtgcaccgggctgccttttttt 28494289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 211
Target Start/End: Complemental strand, 17043473 - 17043423
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgc 211  Q
    |||| ||||||||||||||  | |||||||||||||||||||||||| |||||    
T  17043473 ctgcgtacaatacaccaaa--tggtgggaccccttcccagaccctgcatatgc 17043423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 164 - 221
Target Start/End: Complemental strand, 49938668 - 49938612
Alignment:
Q  164 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggcttta 221  Q
    ||||||||||||||| | |||||||||||||||| ||||||| |||||| | ||||||    
T  49938668 tacaatacaccaaaa-tggtgggaccccttcccataccctgcatatgcgggagcttta 49938612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 243
Target Start/End: Complemental strand, 50555714 - 50555653
Alignment:
Q  182 gtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 243  Q
    |||| |||||||||| ||||||||||||||  | | |||| ||||||||| |||||||||||    
T  50555714 gtggaaccccttcccggaccctgcgtatgcaggagttttagtgcaccgggctgccctttttt 50555653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 235
Target Start/End: Original strand, 21489143 - 21489218
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgc 235  Q
    |||| |||||| |||||||| | |||||||||||||||  |||||||||||||| | |||||  ||||| |||||||    
T  21489143 ctgcgtacaatgcaccaaaa-tggtgggaccccttcccgaaccctgcgtatgcgggagctttcgtgcactgggttgc 21489218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 243
Target Start/End: Original strand, 25343243 - 25343327
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 243  Q
    |||| ||||||||||||||||  || ||||||||||| ||| |||||||||| | | ||||||  ||||| || ||||| |||||    
T  25343243 ctgcgtacaatacaccaaaaagggttggaccccttcctagatcctgcgtatgtgagagctttagagcacccggctgccccttttt 25343327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 112
Target Start/End: Original strand, 28185042 - 28185086
Alignment:
Q  68 acgtacaattagagctgtcaaaaatgagccggtccattggcccat 112  Q
    ||||| || ||||||||||||||||| ||||| ||||||||||||    
T  28185042 acgtagaagtagagctgtcaaaaatgggccggcccattggcccat 28185086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 3e-20; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 159 - 241
Target Start/End: Complemental strand, 39461075 - 39460993
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 241  Q
    |||| ||||||||||||| ||| ||| ||||||||||| ||||||||||||||| | |||||| |||||||||||||||||||    
T  39461075 ctgcgtacaatacaccaataatggtgagaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttt 39460993  T

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Target: chr8; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 159 - 241
Target Start/End: Original strand, 12625946 - 12626026
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 241  Q
    |||||||||||||||||||  | |||||||||| |||| ||||||||||||||| | |||||| |||||||||||||||||||    
T  12625946 ctgcatacaatacaccaaa--tggtgggaccccctcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttt 12626026  T

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Target: chr8; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 164 - 242
Target Start/End: Original strand, 16013515 - 16013593
Alignment:
Q  164 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttt 242  Q
    |||||||||| |||||| ||| |||||||||||||||||||| |||||| | |||||| |||||||||||| |||||||    
T  16013515 tacaatacactaaaaatggtgcgaccccttcccagaccctgcctatgcgggagctttagtgcaccgggttgtccttttt 16013593  T

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Target: chr8; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 164 - 244
Target Start/End: Original strand, 35261740 - 35261818
Alignment:
Q  164 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttta 244  Q
    ||||||||||||||  | ||||||||||||||  ||||||||||||||| | |||||| ||||||||||||||||||||||    
T  35261740 tacaatacaccaaa--tggtgggaccccttcctggaccctgcgtatgcgggagctttagtgcaccgggttgccctttttta 35261818  T

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Target: chr8; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 159 - 243
Target Start/End: Complemental strand, 7136608 - 7136524
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 243  Q
    |||| ||||||||||||| ||| ||||||||||||||| ||||| || |||||| | |||||| ||||||||||| |||||||||    
T  7136608 ctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgggagctttagtgcaccgggttaccctttttt 7136524  T

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Target: chr8; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 159 - 243
Target Start/End: Original strand, 20869979 - 20870063
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 243  Q
    |||| ||||||||||||| ||| ||||||||||||||  ||||| || |||||| | |||||| |||||||||||||||||||||    
T  20869979 ctgcgtacaatacaccaataatggtgggaccccttccaggaccccgcatatgcgggagctttagtgcaccgggttgccctttttt 20870063  T

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Target: chr8; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 164 - 243
Target Start/End: Original strand, 6760883 - 6760962
Alignment:
Q  164 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 243  Q
    ||||||||||||| ||| ||||||||||||| | ||||| || |||||| | |||||| |||||||||||||||||||||    
T  6760883 tacaatacaccaataatggtgggaccccttctcggaccccgcatatgcgggagctttagtgcaccgggttgccctttttt 6760962  T

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Target: chr8; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 159 - 234
Target Start/End: Complemental strand, 20284150 - 20284075
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttg 234  Q
    |||| ||||||||||||| ||| ||||||||||||||| ||||||||||||||| | | |||| ||||||||||||    
T  20284150 ctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgtatgcgggagttttagtgcaccgggttg 20284075  T

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Target: chr8; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 159 - 234
Target Start/End: Complemental strand, 21070778 - 21070703
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttg 234  Q
    |||| ||||||||||||| ||| ||||||||||||||| ||||||||||||||| | | |||| ||||||||||||    
T  21070778 ctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgtatgcgggagttttagtgcaccgggttg 21070703  T

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Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 159 - 241
Target Start/End: Original strand, 26954189 - 26954271
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 241  Q
    |||| ||||||||||||| ||| ||||||||||||||||||||  || |||||| | |||||| ||||| |||||||||||||    
T  26954189 ctgcgtacaatacaccaataatggtgggaccccttcccagacctcgcatatgcgggagctttagtgcactgggttgccctttt 26954271  T

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Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 163 - 243
Target Start/End: Original strand, 26102577 - 26102655
Alignment:
Q  163 atacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 243  Q
    |||||||||||||||  | ||||||||||||||| |||||||| |||||| | ||| || |||||||||||||||||||||    
T  26102577 atacaatacaccaaa--tggtgggaccccttcccggaccctgcttatgcgggagctctagtgcaccgggttgccctttttt 26102655  T

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Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 164 - 243
Target Start/End: Complemental strand, 8897838 - 8897761
Alignment:
Q  164 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 243  Q
    ||||||||||||||  | ||||||||||||||| |||||||| |||||| | |||||| |||||| ||||||||||||||    
T  8897838 tacaatacaccaaa--tggtgggaccccttcccggaccctgcatatgcgggagctttactgcacccggttgccctttttt 8897761  T

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Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 182 - 242
Target Start/End: Complemental strand, 28817684 - 28817624
Alignment:
Q  182 gtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttt 242  Q
    ||||||||||||||| ||||||||||||||| | |||||| |||| |||||||||||||||    
T  28817684 gtgggaccccttcccggaccctgcgtatgcgggagctttagtgcatcgggttgcccttttt 28817624  T

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Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 159 - 242
Target Start/End: Original strand, 25250578 - 25250661
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttt 242  Q
    |||| ||||||||||||| ||| |||||||||||||||  |||| || |||||| | | |||| ||||||||||||||||||||    
T  25250578 ctgcgtacaatacaccaataatggtgggaccccttcccgaaccccgcatatgcgggagatttagtgcaccgggttgcccttttt 25250661  T

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Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 240
Target Start/End: Original strand, 28407475 - 28407538
Alignment:
Q  177 aaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 240  Q
    |||| ||||||||||||||| |||||| |||||||| | |||||| ||||||||||||||||||    
T  28407475 aaatggtgggaccccttcccggaccctacgtatgcgggagctttactgcaccgggttgcccttt 28407538  T

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Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 159 - 241
Target Start/End: Original strand, 36720852 - 36720932
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 241  Q
    |||| ||||||||||||||  | ||||||||||||||| |||||||||||||||   |||||| |||||| ||||||||||||    
T  36720852 ctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcgtatgcggaagctttagtgcacccggttgccctttt 36720932  T

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Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 159 - 241
Target Start/End: Original strand, 44530205 - 44530285
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 241  Q
    |||| ||||||||||||||  | ||||||||||||||  ||||||||||||||| | |||||| |||||||||||| ||||||    
T  44530205 ctgcgtacaatacaccaaa--tggtgggaccccttcctggaccctgcgtatgcgggagctttagtgcaccgggttgacctttt 44530285  T

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Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 227
Target Start/End: Complemental strand, 44781580 - 44781517
Alignment:
Q  164 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcac 227  Q
    |||||||||||||||||  ||||||||| |||||||||||||||||||| | |||||| |||||    
T  44781580 tacaatacaccaaaaatgttgggaccccgtcccagaccctgcgtatgcgggagctttagtgcac 44781517  T

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Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 240
Target Start/End: Original strand, 13160757 - 13160836
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 240  Q
    |||| ||||||||||||||  | ||||||||||||||| ||||||||||||||| | |||| | ||| ||||||||||||||    
T  13160757 ctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcgtatgcgggagcttcagtgcgccgggttgcccttt 13160836  T

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Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 240
Target Start/End: Complemental strand, 29521764 - 29521685
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 240  Q
    |||| ||||||||||||||  | |||||| ||| |||||||||||||||||||| | |||||| ||||||||||||| ||||    
T  29521764 ctgcgtacaatacaccaaa--tggtgggaacccatcccagaccctgcgtatgcgggagctttagtgcaccgggttgctcttt 29521685  T

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Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 243
Target Start/End: Complemental strand, 30454160 - 30454094
Alignment:
Q  177 aaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 243  Q
    |||| ||||||||||||||| |||||||| |||||| | ||| || |||||||||||||||||||||    
T  30454160 aaatggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttttt 30454094  T

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Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 243
Target Start/End: Complemental strand, 12670329 - 12670247
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 243  Q
    |||| ||||||||||||||  | ||||||||||||||| |||||||| |||||| | ||| || ||||||||||| |||||||||    
T  12670329 ctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttaccctttttt 12670247  T

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Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 240
Target Start/End: Original strand, 16225075 - 16225156
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 240  Q
    |||| ||||||||||||| ||| |||||| |||||||| ||||| || |||||| | |||||| |||||||||||| |||||    
T  16225075 ctgcgtacaatacaccaataatggtgggatcccttcccggaccccgcatatgcgggagctttagtgcaccgggttgtccttt 16225156  T

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Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 45071320 - 45071398
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctt 239  Q
    |||| ||||||||||||||  | ||||||||||||||| |||| |||||||||| | |||| | |||||||||||||||||    
T  45071320 ctgcgtacaatacaccaaa--tggtgggaccccttcccggaccttgcgtatgcgggagcttcagtgcaccgggttgccctt 45071398  T

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Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 191 - 243
Target Start/End: Complemental strand, 27468141 - 27468089
Alignment:
Q  191 cttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 243  Q
    |||||| ||||||||||||||| | |||||| |||||||||||||||||||||    
T  27468141 cttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttttt 27468089  T

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Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 105 - 160
Target Start/End: Original strand, 37698567 - 37698620
Alignment:
Q  105 tggcccatttctatagttgggcctctcgggcccgggccggcccatttgacacctct 160  Q
    ||||||||||||||||| |||||||  ||| |||||||||||||||||||||||||    
T  37698567 tggcccatttctatagtcgggcctc--ggggccgggccggcccatttgacacctct 37698620  T

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Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 239
Target Start/End: Original strand, 27507987 - 27508044
Alignment:
Q  182 gtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctt 239  Q
    |||||||||||||||  |||||||||||||| | |||||| |||||||||||| ||||    
T  27507987 gtgggaccccttcccgaaccctgcgtatgcgggagctttagtgcaccgggttgtcctt 27508044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 200
Target Start/End: Original strand, 43942380 - 43942421
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagac 200  Q
    |||| ||||||||||||||||| |||||||||||||||||||    
T  43942380 ctgcgtacaatacaccaaaaatggtgggaccccttcccagac 43942421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 242
Target Start/End: Original strand, 10857906 - 10857966
Alignment:
Q  182 gtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttt 242  Q
    |||||||| |||||  |||| |||||||||| | |||||| ||||||||||||||||||||    
T  10857906 gtgggaccacttcctggaccttgcgtatgcgggagctttagtgcaccgggttgcccttttt 10857966  T

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Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 160
Target Start/End: Original strand, 18405319 - 18405374
Alignment:
Q  107 gcccatttctatagttgggcctctcgggcccgggccggc--ccatttgacacctct 160  Q
    ||||||||||||||| |||||||||||||| | ||||||  |||||||||||||||    
T  18405319 gcccatttctatagtcgggcctctcgggcctgagccggcggccatttgacacctct 18405374  T

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Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 160
Target Start/End: Original strand, 27127153 - 27127213
Alignment:
Q  105 tggcccatttctatagttgggcctctcgggc-----ccgggccggcccatttgacacctct 160  Q
    ||||||||||||||||| |||||||||||||     |||||| ||||||||||||||||||    
T  27127153 tggcccatttctatagtcgggcctctcgggcttgggccgggctggcccatttgacacctct 27127213  T

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Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 238
Target Start/End: Original strand, 29877150 - 29877227
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccct 238  Q
    |||| ||||||||||||||  | ||||||||||||||| ||||||||||||||| | || ||| |||||| || ||||||    
T  29877150 ctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcgtatgcgggagcgttagtgcaccaggctgccct 29877227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 31457252 - 31457308
Alignment:
Q  185 ggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 241  Q
    ||||||||||||| |||||||||||||| | ||| || |||||||| ||||||||||    
T  31457252 ggaccccttcccaaaccctgcgtatgcgggagctctagtgcaccggattgccctttt 31457308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 241
Target Start/End: Complemental strand, 35107374 - 35107310
Alignment:
Q  177 aaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 241  Q
    |||| ||||||||||||||| ||| ||| |||||||   |||||| |||||||||||||||||||    
T  35107374 aaatggtgggaccccttcccggacgctgtgtatgcggaagctttagtgcaccgggttgccctttt 35107310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 242
Target Start/End: Complemental strand, 5135363 - 5135288
Alignment:
Q  164 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttt 242  Q
    ||||||||||||||  | ||||||||||||||| ||||||||||||||  | |||||  ||||||||| ||||||||||    
T  5135363 tacaatacaccaaa--tggtgggaccccttcccggaccctgcgtatgcaggagcttt-gtgcaccgggctgcccttttt 5135288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 22598164 - 22598223
Alignment:
Q  18 acgggttcatatcctggaaacaacctctt-tataaaaagcggggtaaggctacgtacaat 76  Q
    ||||||||| ||||||||||||||||||| | |||||| | ||||||||||| |||||||    
T  22598164 acgggttcaaatcctggaaacaacctcttgtgtaaaaaacagggtaaggctatgtacaat 22598223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 240
Target Start/End: Original strand, 2626578 - 2626657
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 240  Q
    |||| ||||||||||||||  |  ||||||||||||||||||||||| |||||| | |||| | |||||| | |||||||||    
T  2626578 ctgcgtacaatacaccaaa--tgatgggaccccttcccagaccctgcatatgcgggagcttcagtgcaccagattgcccttt 2626657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 242
Target Start/End: Complemental strand, 18164808 - 18164758
Alignment:
Q  192 ttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttt 242  Q
    ||||| ||||||||||||||| | |||||| |||||||||||||| |||||    
T  18164808 ttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccattttt 18164758  T

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Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 231
Target Start/End: Complemental strand, 8483996 - 8483947
Alignment:
Q  182 gtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccggg 231  Q
    |||||||||| |||||||||||||||||||| | ||||||  ||||||||    
T  8483996 gtgggaccccatcccagaccctgcgtatgcgggagctttagggcaccggg 8483947  T

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Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 108 - 165
Target Start/End: Original strand, 30232764 - 30232820
Alignment:
Q  108 cccatttctatagttgggcctctcgggcccgggccggcccatttgacacctctgcata 165  Q
    ||||||| | ||||||||||||||| ||| ||||| ||||||||||||||||| ||||    
T  30232764 cccatttatgtagttgggcctctcgagcc-gggccagcccatttgacacctctacata 30232820  T

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Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 108 - 160
Target Start/End: Complemental strand, 44598998 - 44598941
Alignment:
Q  108 cccatttctatagttgggcctctcgggccc-----gggccggcccatttgacacctct 160  Q
    |||||||||||||| |||||||||||| ||     |||||||||||||||||||||||    
T  44598998 cccatttctatagtcgggcctctcgggtccgggctgggccggcccatttgacacctct 44598941  T

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Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 141
Target Start/End: Original strand, 10730432 - 10730468
Alignment:
Q  105 tggcccatttctatagttgggcctctcgggcccgggc 141  Q
    ||||||||||||||||| ||||||||||| |||||||    
T  10730432 tggcccatttctatagtcgggcctctcggacccgggc 10730468  T

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Target: scaffold0057 (Bit Score: 49; Significance: 4e-19; HSPs: 3)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 164 - 243
Target Start/End: Original strand, 46892 - 46969
Alignment:
Q  164 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 243  Q
    ||||||||||||||  | ||||||||||||||| ||||||||||||||| | |||||| |||||||||||||||||||||    
T  46892 tacaatacaccaaa--tggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcaccgggttgccctttttt 46969  T

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Target: scaffold0057; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 244
Target Start/End: Complemental strand, 46786 - 46703
Alignment:
Q  160 tgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttta 244  Q
    ||||||||||| ||||||| | ||||||||||||||||||||||||||||||| | ||||||||||| | || ||||| ||||||    
T  46786 tgcatacaatataccaaaa-tggtgggaccccttcccagaccctgcgtatgcgggagctttaatgcatcaggctgcccattttta 46703  T

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Target: scaffold0057; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 243
Target Start/End: Complemental strand, 24835 - 24769
Alignment:
Q  177 aaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 243  Q
    |||| |||||||||||||||  |||||||||||||| | |||||| |||| | ||||||||||||||    
T  24835 aaatggtgggaccccttcccgaaccctgcgtatgcgggagctttagtgcagccggttgccctttttt 24769  T

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Target: chr7 (Bit Score: 47; Significance: 6e-18; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 164 - 242
Target Start/End: Original strand, 42805585 - 42805663
Alignment:
Q  164 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttt 242  Q
    ||||||||||||| ||| ||||||||||||||| ||||| || |||||| | |||||| ||||||||||||||||||||    
T  42805585 tacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgggagctttagtgcaccgggttgcccttttt 42805663  T

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Target: chr7; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 159 - 243
Target Start/End: Original strand, 7879694 - 7879776
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 243  Q
    |||| ||||||||||||||  | ||||||||||||||| ||||||||||||||| | |||| | |||||||||||||||||||||    
T  7879694 ctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcgtatgcgggagcttcagtgcaccgggttgccctttttt 7879776  T

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Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 159 - 244
Target Start/End: Complemental strand, 27889395 - 27889312
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttta 244  Q
    |||| ||||||||||||||  | ||||||||||||||| ||||||||||||||| | |||||  | ||||||||||||||||||||    
T  27889395 ctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcgtatgcgggagctttggtacaccgggttgccctttttta 27889312  T

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Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 159 - 243
Target Start/End: Complemental strand, 42391179 - 42391097
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 243  Q
    |||| ||||||||||||||  | ||||||||||||||| |||||||| |||||| | ||| || |||||||||||||||||||||    
T  42391179 ctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttttt 42391097  T

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Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 159 - 243
Target Start/End: Original strand, 43557528 - 43557613
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggc-tttaatgcaccgggttgccctttttt 243  Q
    |||| ||||||||||||| ||| |||||||||| |||| ||| ||||||||||| | || |||| |||||||||||||||||||||    
T  43557528 ctgcgtacaatacaccaataatggtgggaccccctcccggactctgcgtatgcgggagcttttagtgcaccgggttgccctttttt 43557613  T

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Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 159 - 240
Target Start/End: Original strand, 47716515 - 47716596
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 240  Q
    |||| ||||||||||||| ||| ||||||||||||||| ||||| || |||||| | |||||  ||||||||||||||||||    
T  47716515 ctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgggagctttggtgcaccgggttgcccttt 47716596  T

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Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 164 - 243
Target Start/End: Original strand, 32758320 - 32758397
Alignment:
Q  164 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 243  Q
    ||||||||||||||  | ||||||||||||||| |||||||| |||||| | ||| || |||||||||||||||||||||    
T  32758320 tacaatacaccaaa--tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttttt 32758397  T

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Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 239
Target Start/End: Complemental strand, 3469251 - 3469176
Alignment:
Q  164 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctt 239  Q
    ||||||||||||||||| | |||||||||||| |||||||| ||||||| | |||||| ||| | |||||||||||    
T  3469251 tacaatacaccaaaaatggcgggaccccttcctagaccctgtgtatgcgggagctttagtgcgctgggttgccctt 3469176  T

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Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 159 - 241
Target Start/End: Complemental strand, 21172088 - 21172008
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 241  Q
    |||| ||||||||||||||  | ||||||||||||||| |||||||| |||||| | ||| || |||||||||||||||||||    
T  21172088 ctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttt 21172008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 236
Target Start/End: Complemental strand, 33871989 - 33871914
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcc 236  Q
    |||| ||||||||||||||  | ||||||||||||||||||||||| ||||||| | |||||| |||||| |||||||    
T  33871989 ctgcgtacaatacaccaaa--tggtgggaccccttcccagaccctgtgtatgcgagagctttagtgcaccaggttgcc 33871914  T

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Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 241
Target Start/End: Complemental strand, 35787343 - 35787268
Alignment:
Q  164 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 241  Q
    ||||||||||||||  | | ||||||||||||| |||| |||||||||| | |||| |||||||||||||||||||||    
T  35787343 tacaatacaccaaa--tggcgggaccccttcccggaccttgcgtatgcgggagcttcaatgcaccgggttgccctttt 35787268  T

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Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 193 - 243
Target Start/End: Original strand, 36602535 - 36602585
Alignment:
Q  193 tcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 243  Q
    |||||||||||||||||||| | |||||| |||||||||||||||||||||    
T  36602535 tcccagaccctgcgtatgcgggagctttagtgcaccgggttgccctttttt 36602585  T

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Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 240
Target Start/End: Complemental strand, 48735201 - 48735122
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 240  Q
    |||| ||||||||||||||  | ||||||||||||||| |||||||| |||||| | ||| || ||||||||||||||||||    
T  48735201 ctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgcccttt 48735122  T

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Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 243
Target Start/End: Complemental strand, 38262274 - 38262193
Alignment:
Q  160 tgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 243  Q
    ||||||||||||||||||  |  ||||||||||||||  || ||||||||||| | |||||| |||||||| ||||||||||||    
T  38262274 tgcatacaatacaccaaa--tgatgggaccccttcccgaacactgcgtatgcgggagctttagtgcaccggattgccctttttt 38262193  T

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Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 159 - 240
Target Start/End: Complemental strand, 45019006 - 45018923
Alignment:
Q  159 ctgcatacaatacaccaaaaa--tagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 240  Q
    |||| ||||||| ||||||||  | |||| |||||||||| ||||||||||||||| | |||||| |||||| |||||||||||    
T  45019006 ctgcgtacaatataccaaaaaactggtggaaccccttcccggaccctgcgtatgcgggagctttagtgcaccaggttgcccttt 45018923  T

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Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 240
Target Start/End: Complemental strand, 2541082 - 2541019
Alignment:
Q  177 aaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 240  Q
    |||| ||||||||||||||| | ||||||||||||| | |||||| ||||||||||| ||||||    
T  2541082 aaatggtgggaccccttcccggtccctgcgtatgcgggagctttagtgcaccgggtttcccttt 2541019  T

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Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 39123957 - 39124000
Alignment:
Q  167 aatacaccaaaaatagtgggaccccttcccagaccctgcgtatg 210  Q
    |||||||||||||| ||||||||||||||| |||||||||||||    
T  39123957 aatacaccaaaaatggtgggaccccttcccggaccctgcgtatg 39124000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 159 - 240
Target Start/End: Complemental strand, 10693152 - 10693073
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 240  Q
    |||| ||||||||||||||  | ||||||||||||||| |||||||| |||||| | ||| || ||||| ||||||||||||    
T  10693152 ctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcactgggttgcccttt 10693073  T

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Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 159 - 240
Target Start/End: Complemental strand, 22699049 - 22698967
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccc-cttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 240  Q
    |||| ||||||||||||||||| |||||||||  ||||| ||||||| ||||||| | ||| || ||||||||||| ||||||    
T  22699049 ctgcgtacaatacaccaaaaatggtgggacccttttcccggaccctgtgtatgcgggagctatagtgcaccgggttacccttt 22698967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 159 - 240
Target Start/End: Complemental strand, 23419753 - 23419674
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 240  Q
    |||| ||||||||||||||  | |||||||||||||| ||||| ||||| |||| |||||||| |||| |||| ||||||||    
T  23419753 ctgcgtacaatacaccaaa--tggtgggaccccttcctagaccttgcgtgtgcgggggctttagtgcatcgggctgcccttt 23419674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 243
Target Start/End: Complemental strand, 34626271 - 34626205
Alignment:
Q  177 aaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 243  Q
    |||| |||||| |||||||| ||||||||||||||| | |||||| | || ||||||||||||||||    
T  34626271 aaatggtgggatcccttcccggaccctgcgtatgcgggagctttagttcatcgggttgccctttttt 34626205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 11617667 - 11617589
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctt 239  Q
    |||| ||||||||||||||  | ||||||||||||||  ||||||||||||||  |  ||||| |||||||||||||||||    
T  11617667 ctgcgtacaatacaccaaa--tggtgggaccccttcctggaccctgcgtatgcaggacctttagtgcaccgggttgccctt 11617589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 212
Target Start/End: Original strand, 33500569 - 33500622
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcg 212  Q
    |||| ||| |||||| |||||| ||||||||||||||| |||||||||||||||    
T  33500569 ctgcgtactatacacaaaaaatggtgggaccccttcccggaccctgcgtatgcg 33500622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 238
Target Start/End: Complemental strand, 18512511 - 18512455
Alignment:
Q  182 gtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccct 238  Q
    ||||||||||||||| ||||||||||||||| | |||||  ||||| ||||||||||    
T  18512511 gtgggaccccttcccggaccctgcgtatgcgggagctttggtgcactgggttgccct 18512455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 241
Target Start/End: Complemental strand, 31591172 - 31591108
Alignment:
Q  177 aaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 241  Q
    |||| ||||||||||||||| |||| ||| |||||| | ||| || |||||||||||||||||||    
T  31591172 aaatggtgggaccccttcccggaccttgcatatgcgggagctctagtgcaccgggttgccctttt 31591108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 238
Target Start/End: Complemental strand, 35334874 - 35334818
Alignment:
Q  182 gtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccct 238  Q
    ||||||||||||||| ||||||||||||||  | |||||| ||||||||||| ||||    
T  35334874 gtgggaccccttcccggaccctgcgtatgcaggagctttagtgcaccgggtttccct 35334818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 241
Target Start/End: Original strand, 40463948 - 40464012
Alignment:
Q  177 aaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 241  Q
    |||| ||||||||||||| | ||||||||||||||| | |||| | ||||||| |||||||||||    
T  40463948 aaatggtgggaccccttctcggaccctgcgtatgcgggagcttcagtgcaccgagttgccctttt 40464012  T

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Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 242
Target Start/End: Original strand, 42798725 - 42798806
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttt 242  Q
    |||| ||||||||||||||  | ||||||||| ||||| |||||||| |||||| | ||| || |||| |||||||||||||||    
T  42798725 ctgcgtacaatacaccaaa--tggtgggaccctttcccggaccctgcatatgcgggagctatagtgcatcgggttgcccttttt 42798806  T

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Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 243
Target Start/End: Original strand, 25198810 - 25198864
Alignment:
Q  189 cccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 243  Q
    ||||||||||||||| |||||| | | |||||| ||||||||||||| |||||||    
T  25198810 cccttcccagacccttcgtatgtgagagctttagtgcaccgggttgcactttttt 25198864  T

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Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 239
Target Start/End: Original strand, 29907482 - 29907552
Alignment:
Q  166 caatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctt 239  Q
    ||||||||||||| | |||||||||| |||| |||||||  |||||| | |||||| |||||||||||||||||    
T  29907482 caatacaccaaaa-tggtgggaccccatcccggaccctg--tatgcgggagctttagtgcaccgggttgccctt 29907552  T

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Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 239
Target Start/End: Original strand, 18747564 - 18747621
Alignment:
Q  182 gtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctt 239  Q
    ||||||||||||||   |||||||||||||| | |||||| ||||||||| |||||||    
T  18747564 gtgggaccccttcctgaaccctgcgtatgcgggagctttagtgcaccgggctgccctt 18747621  T

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Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 243
Target Start/End: Complemental strand, 19426968 - 19426887
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 243  Q
    |||| ||||||||||||||  | ||||||||| ||| | |||||||| |||||| | |||| | |||||||||||||||||||||    
T  19426968 ctgcgtacaatacaccaaa--tggtgggaccc-ttctcggaccctgcatatgcgagagcttcagtgcaccgggttgccctttttt 19426887  T

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Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 177 - 242
Target Start/End: Complemental strand, 23619040 - 23618975
Alignment:
Q  177 aaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttt 242  Q
    |||| ||||||||||||| |||||| ||||| |||  | |||||| |||| |||||||||||||||    
T  23619040 aaatggtgggaccccttcgcagaccttgcgtttgcaggagctttagtgcagcgggttgcccttttt 23618975  T

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Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 177 - 242
Target Start/End: Original strand, 27629706 - 27629771
Alignment:
Q  177 aaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttt 242  Q
    |||| ||||||||||||||| | |||||| ||||||   |||| | ||||||||||||||||||||    
T  27629706 aaatggtgggaccccttcccgggccctgcatatgcggtagcttcagtgcaccgggttgcccttttt 27629771  T

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Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 231
Target Start/End: Original strand, 21566491 - 21566562
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccggg 231  Q
    |||| ||||||||||||||| | || ||||||||||||  ||||||| |||||| | |||||| |||||||||    
T  21566491 ctgcgtacaatacaccaaaa-tggtaggaccccttcccgaaccctgcatatgcgggagctttagtgcaccggg 21566562  T

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Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 238
Target Start/End: Original strand, 27697528 - 27697572
Alignment:
Q  194 cccagaccctgcgtatgcgcgggctttaatgcaccgggttgccct 238  Q
    ||||||||||||||||||| | |||| ||||||||||| ||||||    
T  27697528 cccagaccctgcgtatgcgggagcttaaatgcaccgggatgccct 27697572  T

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Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 137
Target Start/End: Original strand, 45261872 - 45261904
Alignment:
Q  105 tggcccatttctatagttgggcctctcgggccc 137  Q
    ||||||||||||||||| |||||||||||||||    
T  45261872 tggcccatttctatagtcgggcctctcgggccc 45261904  T

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Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 245
Target Start/End: Original strand, 45811919 - 45811986
Alignment:
Q  177 aaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttttat 245  Q
    |||| |||||| ||||| ||||||||||| |||||  | |||||| |||| ||||||||||||||||||    
T  45811919 aaatggtgggatccctttccagaccctgcttatgcaggagctttagtgca-cgggttgcccttttttat 45811986  T

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Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 211
Target Start/End: Original strand, 46354250 - 46354302
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgc 211  Q
    |||| ||||||||||||| ||| ||||||||||||||| ||||| || |||||    
T  46354250 ctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgc 46354302  T

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Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 243
Target Start/End: Complemental strand, 47077929 - 47077852
Alignment:
Q  164 tacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 243  Q
    ||||||||||  ||||| |||||||||||||||| ||||| | |||||| | ||| || |||||||| ||||| ||||||    
T  47077929 tacaatacac--aaaatggtgggaccccttcccaaaccctacatatgcgggagctctagtgcaccggattgccttttttt 47077852  T

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Target: scaffold0168 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 242
Target Start/End: Original strand, 30633 - 30714
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttttt 242  Q
    |||| ||||||||||||||  | ||||||||||||||| |||||||| |||||| | ||| || ||||||||||||||||||||    
T  30633 ctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgcccttttt 30714  T

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Target: scaffold0015 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 159 - 241
Target Start/End: Complemental strand, 48713 - 48633
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 241  Q
    |||| ||||||||||||||  | ||||||||||||||| |||||||| |||||| | ||| || |||||||||||||||||||    
T  48713 ctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccgggttgccctttt 48633  T

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Target: scaffold0180 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 243
Target Start/End: Complemental strand, 24212 - 24130
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttttt 243  Q
    |||| ||||||||||||||  | ||||||||||||||| |||||||| |||||| | ||| || |||||||| ||||||||||||    
T  24212 ctgcgtacaatacaccaaa--tggtgggaccccttcccggaccctgcatatgcgggagctctagtgcaccggattgccctttttt 24130  T

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Target: scaffold0311 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 177 - 241
Target Start/End: Original strand, 10882 - 10946
Alignment:
Q  177 aaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccctttt 241  Q
    |||| ||||||||||||||| ||||||||||||||| | |||||| ||||| ||||||| |||||    
T  10882 aaatggtgggaccccttcccggaccctgcgtatgcgggagctttagtgcactgggttgctctttt 10946  T

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Target: scaffold1176 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 159 - 236
Target Start/End: Complemental strand, 1666 - 1591
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcc 236  Q
    |||||||||||||||||||  |  |||||||||||||| ||||| ||||||||| | |||||| |||||| |||||||    
T  1666 ctgcatacaatacaccaaa--tgatgggaccccttcccggacccggcgtatgcgggagctttagtgcaccaggttgcc 1591  T

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Target: scaffold0187 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 238
Target Start/End: Complemental strand, 10129 - 10052
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccct 238  Q
    |||| ||||||||||||||  ||||||||||||||||| |||||||| |||||  | |||  | ||||||||||||||||    
T  10129 ctgcgtacaatacaccaaa--tagtgggaccccttcccggaccctgcatatgcaggagctccagtgcaccgggttgccct 10052  T

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Target: scaffold0187; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 238
Target Start/End: Complemental strand, 20457 - 20380
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgccct 238  Q
    |||| ||||||||||||||  ||||||||||||||||| |||||||| |||||  | |||  | ||||||||||||||||    
T  20457 ctgcgtacaatacaccaaa--tagtgggaccccttcccggaccctgcatatgcaggagctccagtgcaccgggttgccct 20380  T

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Target: scaffold0223 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 240
Target Start/End: Original strand, 11185 - 11264
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 240  Q
    |||| ||||||||||||||  | ||||||| ||||||| |||||||| |||||| | ||| || |||||| |||||||||||    
T  11185 ctgcttacaatacaccaaa--tggtgggacaccttcccggaccctgcatatgcgggagctctagtgcaccaggttgcccttt 11264  T

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Target: scaffold0018 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 240
Target Start/End: Complemental strand, 72946 - 72867
Alignment:
Q  159 ctgcatacaatacaccaaaaatagtgggaccccttcccagaccctgcgtatgcgcgggctttaatgcaccgggttgcccttt 240  Q
    |||| ||||||||||||||  | || | |||||||||| || |||||||||||| | |||||| |||||| |||||||||||    
T  72946 ctgcctacaatacaccaaa--tggtagtaccccttcccggaacctgcgtatgcgggagctttagtgcaccaggttgcccttt 72867  T

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Target: scaffold0242 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0242
Description:

Target: scaffold0242; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 108 - 160
Target Start/End: Original strand, 4232 - 4289
Alignment:
Q  108 cccatttctatagttgggcctctcgggccc-----gggccggcccatttgacacctct 160  Q
    |||||||||||||| |||| ||||||||||     |||||||||||||||||||||||    
T  4232 cccatttctatagtcgggcttctcgggcccgggctgggccggcccatttgacacctct 4289  T

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