View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20175_low_37 (Length: 249)
Name: NF20175_low_37
Description: NF20175
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20175_low_37 |
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Alignment Details
Target: chr2 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 15 - 237
Target Start/End: Complemental strand, 16067941 - 16067710
Alignment:
| Q |
15 |
ataagtactaacaattgcatatggttagagtatagattaactt---------taatgaactaatatataaaacatgctagctagtgggtttgactagtga |
105 |
Q |
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| T |
16067941 |
ataagtactaacaattgcatatggttagagtatagattaacttaattctttataatgaactaatatataaaacatgctagctagtgggtttgactagtga |
16067842 |
T |
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| Q |
106 |
aatatcgacctatctaagtcaaatttgcacattttgtttgtacacaaatattttggttgcacattttgtctacttgattcaagccatattaatttctcca |
205 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
16067841 |
aatatcgacctatctaagtcaaatttgcacattttgtttgtacacaaatattttggttgcacattttgtctacttgattcaagccatattaatttctcca |
16067742 |
T |
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| Q |
206 |
aaaacattatgcaaaagttagtatttattgat |
237 |
Q |
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| T |
16067741 |
ataacattatgcaaaagttagtatttattgat |
16067710 |
T |
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