View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20177_high_28 (Length: 350)

Name: NF20177_high_28
Description: NF20177
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20177_high_28
NF20177_high_28
[»] chr8 (37 HSPs)
chr8 (111-333)||(29718138-29718358)
chr8 (1-110)||(37465980-37466089)
chr8 (1-100)||(16323855-16323954)
chr8 (1-111)||(529567-529677)
chr8 (1-110)||(17642370-17642479)
chr8 (1-96)||(39347146-39347241)
chr8 (4-107)||(13482912-13483014)
chr8 (1-108)||(43485053-43485160)
chr8 (2-107)||(2273307-2273412)
chr8 (1-110)||(43049832-43049941)
chr8 (1-110)||(26439509-26439632)
chr8 (1-104)||(19718333-19718428)
chr8 (1-104)||(36886168-36886271)
chr8 (2-107)||(42444244-42444348)
chr8 (30-110)||(2732109-2732189)
chr8 (2-104)||(43921428-43921531)
chr8 (11-110)||(31158861-31158960)
chr8 (1-107)||(39029613-39029719)
chr8 (1-78)||(4475329-4475406)
chr8 (66-110)||(34332473-34332517)
chr8 (66-110)||(39170998-39171042)
chr8 (66-109)||(23286927-23286970)
chr8 (66-110)||(946333-946377)
chr8 (66-110)||(28090552-28090596)
chr8 (66-110)||(29459997-29460041)
chr8 (66-110)||(44935260-44935304)
chr8 (67-110)||(29773807-29773850)
chr8 (21-112)||(36672008-36672099)
chr8 (75-111)||(23274995-23275031)
chr8 (66-110)||(37511451-37511495)
chr8 (1-111)||(29454142-29454253)
chr8 (22-107)||(6631431-6631516)
chr8 (51-110)||(6799783-6799843)
chr8 (66-110)||(15725890-15725934)
chr8 (66-110)||(17792566-17792610)
chr8 (66-110)||(29229176-29229220)
chr8 (19-87)||(42164931-42164998)
[»] chr3 (44 HSPs)
chr3 (1-110)||(21288813-21288922)
chr3 (1-110)||(788473-788582)
chr3 (1-110)||(27647777-27647886)
chr3 (1-110)||(3082178-3082287)
chr3 (1-111)||(19547785-19547896)
chr3 (1-110)||(25592012-25592123)
chr3 (1-109)||(53516583-53516691)
chr3 (1-107)||(29628986-29629092)
chr3 (1-110)||(4663146-4663255)
chr3 (1-108)||(52082045-52082152)
chr3 (1-89)||(3136559-3136647)
chr3 (1-102)||(7672097-7672198)
chr3 (13-88)||(43714024-43714099)
chr3 (66-111)||(11140607-11140652)
chr3 (21-110)||(29806326-29806415)
chr3 (1-112)||(35375509-35375621)
chr3 (1-56)||(32717949-32718004)
chr3 (66-109)||(42067941-42067984)
chr3 (1-79)||(45518925-45519003)
chr3 (66-111)||(29786532-29786577)
chr3 (10-110)||(9252159-9252259)
chr3 (66-110)||(42363928-42363972)
chr3 (12-111)||(4817075-4817174)
chr3 (11-110)||(45602024-45602123)
chr3 (66-111)||(37492258-37492303)
chr3 (67-112)||(39629946-39629991)
chr3 (66-110)||(38785082-38785126)
chr3 (1-108)||(41982281-41982389)
chr3 (12-111)||(43903381-43903480)
chr3 (66-110)||(44365971-44366015)
chr3 (66-110)||(46959914-46959958)
chr3 (12-110)||(29698322-29698420)
chr3 (8-111)||(54262543-54262646)
chr3 (1-110)||(1129129-1129239)
chr3 (1-106)||(52776453-52776558)
chr3 (10-87)||(19914340-19914417)
chr3 (66-111)||(29347310-29347355)
chr3 (82-110)||(876222-876250)
chr3 (12-104)||(8324696-8324788)
chr3 (66-110)||(8966293-8966337)
chr3 (66-117)||(14998140-14998192)
chr3 (42-110)||(35748922-35748990)
chr3 (39-110)||(48795439-48795511)
chr3 (12-104)||(54911056-54911148)
[»] chr6 (21 HSPs)
chr6 (1-109)||(15383204-15383312)
chr6 (1-106)||(8376024-8376129)
chr6 (1-110)||(6264943-6265052)
chr6 (1-109)||(17010659-17010767)
chr6 (22-111)||(34195878-34195967)
chr6 (1-88)||(30020379-30020466)
chr6 (2-112)||(20469034-20469144)
chr6 (10-110)||(31644410-31644510)
chr6 (66-110)||(2259266-2259310)
chr6 (66-110)||(6848876-6848920)
chr6 (10-110)||(29023619-29023719)
chr6 (32-112)||(10887807-10887888)
chr6 (12-111)||(19473980-19474079)
chr6 (10-110)||(21970613-21970713)
chr6 (67-110)||(24213275-24213318)
chr6 (12-110)||(4509737-4509835)
chr6 (66-112)||(8401412-8401458)
chr6 (1-110)||(18772156-18772266)
chr6 (12-112)||(1705914-1706014)
chr6 (66-110)||(17545965-17546009)
chr6 (66-110)||(32833774-32833818)
[»] chr1 (48 HSPs)
chr1 (1-109)||(26010943-26011051)
chr1 (1-109)||(33098706-33098814)
chr1 (1-109)||(51977859-51977967)
chr1 (1-112)||(33909987-33910098)
chr1 (1-111)||(35910460-35910570)
chr1 (1-106)||(10178876-10178981)
chr1 (2-97)||(42316848-42316943)
chr1 (1-111)||(632647-632757)
chr1 (2-108)||(2247343-2247449)
chr1 (1-110)||(2620971-2621085)
chr1 (1-110)||(50239277-50239386)
chr1 (1-73)||(36274754-36274826)
chr1 (1-87)||(28791390-28791476)
chr1 (1-97)||(23304705-23304800)
chr1 (5-112)||(7122256-7122363)
chr1 (2-64)||(48616495-48616557)
chr1 (4-110)||(51184339-51184445)
chr1 (2-73)||(27353144-27353215)
chr1 (1-72)||(52261110-52261181)
chr1 (2-110)||(11778640-11778744)
chr1 (9-87)||(47718868-47718946)
chr1 (66-110)||(23061364-23061408)
chr1 (66-111)||(37499104-37499149)
chr1 (70-110)||(23057067-23057107)
chr1 (1-84)||(9176724-9176807)
chr1 (10-112)||(51610534-51610636)
chr1 (66-111)||(51369680-51369725)
chr1 (66-110)||(921842-921886)
chr1 (66-110)||(5956526-5956570)
chr1 (66-110)||(6519987-6520030)
chr1 (1-97)||(18992647-18992743)
chr1 (66-110)||(35305514-35305558)
chr1 (66-110)||(51985297-51985341)
chr1 (66-109)||(8461528-8461571)
chr1 (66-101)||(28494132-28494167)
chr1 (1-108)||(30547907-30548014)
chr1 (13-112)||(43146732-43146829)
chr1 (8-110)||(24511883-24511985)
chr1 (13-106)||(26423845-26423938)
chr1 (10-111)||(32912210-32912311)
chr1 (1-87)||(41541501-41541587)
chr1 (66-112)||(46641879-46641925)
chr1 (66-110)||(7435875-7435920)
chr1 (7-104)||(11444277-11444374)
chr1 (1-116)||(9587940-9588056)
chr1 (1-37)||(20487642-20487678)
chr1 (69-113)||(32144666-32144710)
chr1 (1-108)||(34038163-34038271)
[»] chr7 (28 HSPs)
chr7 (1-104)||(20438822-20438925)
chr7 (1-110)||(18990385-18990494)
chr7 (1-110)||(43750372-43750481)
chr7 (1-112)||(48946366-48946477)
chr7 (1-110)||(30317485-30317595)
chr7 (1-110)||(34118767-34118876)
chr7 (1-110)||(30936094-30936203)
chr7 (1-110)||(45857475-45857584)
chr7 (2-112)||(8770368-8770478)
chr7 (2-111)||(44963822-44963931)
chr7 (1-109)||(46836584-46836692)
chr7 (2-108)||(31482670-31482777)
chr7 (2-112)||(11486293-11486403)
chr7 (12-110)||(43069416-43069514)
chr7 (1-110)||(42975192-42975301)
chr7 (1-82)||(41809496-41809577)
chr7 (66-112)||(42711291-42711337)
chr7 (66-111)||(27956647-27956692)
chr7 (66-110)||(41913096-41913140)
chr7 (2-113)||(41663853-41663964)
chr7 (7-104)||(24203170-24203267)
chr7 (70-110)||(28327433-28327473)
chr7 (12-110)||(31743610-31743708)
chr7 (18-104)||(37001005-37001091)
chr7 (66-108)||(45461689-45461731)
chr7 (1-110)||(43631055-43631164)
chr7 (12-111)||(5215333-5215432)
chr7 (68-104)||(29273346-29273382)
[»] chr5 (29 HSPs)
chr5 (1-111)||(13795272-13795381)
chr5 (1-104)||(2318431-2318535)
chr5 (1-104)||(21051327-21051430)
chr5 (1-110)||(28332419-28332528)
chr5 (4-110)||(12362357-12362463)
chr5 (4-110)||(14967531-14967637)
chr5 (4-109)||(3425090-3425195)
chr5 (1-110)||(13091210-13091319)
chr5 (1-106)||(9589505-9589610)
chr5 (1-112)||(27118012-27118123)
chr5 (2-104)||(41802405-41802507)
chr5 (1-109)||(29744199-29744307)
chr5 (1-86)||(35817373-35817458)
chr5 (1-51)||(37431409-37431459)
chr5 (1-110)||(5204617-5204726)
chr5 (66-112)||(13410904-13410950)
chr5 (66-111)||(32467405-32467450)
chr5 (1-88)||(35682391-35682478)
chr5 (66-112)||(34303010-34303056)
chr5 (1-110)||(40756541-40756650)
chr5 (42-110)||(4039469-4039538)
chr5 (10-110)||(17069291-17069391)
chr5 (31-111)||(22780840-22780920)
chr5 (66-110)||(43237355-43237399)
chr5 (7-50)||(33654889-33654932)
chr5 (1-87)||(1490710-1490796)
chr5 (64-110)||(2852058-2852104)
chr5 (66-111)||(42917480-42917525)
chr5 (66-110)||(32455656-32455700)
[»] scaffold0625 (1 HSPs)
scaffold0625 (1-110)||(6266-6375)
[»] chr2 (27 HSPs)
chr2 (1-109)||(37909655-37909763)
chr2 (1-110)||(34438187-34438296)
chr2 (1-107)||(20212156-20212262)
chr2 (1-110)||(6513262-6513371)
chr2 (1-108)||(36489568-36489675)
chr2 (1-107)||(11598412-11598518)
chr2 (1-111)||(43690021-43690131)
chr2 (1-108)||(33413003-33413110)
chr2 (1-110)||(32499442-32499551)
chr2 (1-110)||(6438172-6438281)
chr2 (1-96)||(12547664-12547759)
chr2 (1-88)||(40370768-40370855)
chr2 (66-110)||(34665932-34665976)
chr2 (66-110)||(37083573-37083617)
chr2 (66-110)||(5389202-5389246)
chr2 (66-110)||(14532824-14532868)
chr2 (66-109)||(1353868-1353911)
chr2 (10-112)||(38073104-38073206)
chr2 (66-108)||(11227989-11228031)
chr2 (13-109)||(12002654-12002750)
chr2 (66-110)||(4673601-4673645)
chr2 (66-105)||(15771314-15771353)
chr2 (1-48)||(19268628-19268675)
chr2 (10-49)||(40051276-40051315)
chr2 (66-112)||(3383189-3383235)
chr2 (66-104)||(11813198-11813236)
chr2 (67-111)||(9122155-9122199)
[»] chr4 (33 HSPs)
chr4 (1-110)||(46215772-46215881)
chr4 (1-110)||(53695386-53695495)
chr4 (1-107)||(56361318-56361425)
chr4 (1-110)||(47302693-47302802)
chr4 (1-109)||(9858546-9858654)
chr4 (1-108)||(31908739-31908846)
chr4 (1-107)||(39161804-39161910)
chr4 (2-109)||(36091356-36091463)
chr4 (1-110)||(31681483-31681592)
chr4 (2-97)||(30891170-30891265)
chr4 (12-110)||(46004356-46004453)
chr4 (10-112)||(51282241-51282343)
chr4 (66-110)||(11109596-11109640)
chr4 (66-112)||(28038047-28038093)
chr4 (10-111)||(46663632-46663733)
chr4 (66-110)||(38836212-38836256)
chr4 (66-110)||(48578907-48578951)
chr4 (66-110)||(55722839-55722883)
chr4 (10-112)||(32570674-32570776)
chr4 (10-110)||(30060530-30060630)
chr4 (66-110)||(47302342-47302386)
chr4 (66-110)||(51435812-51435856)
chr4 (1-40)||(29646916-29646955)
chr4 (66-109)||(41759660-41759703)
chr4 (21-108)||(43958996-43959083)
chr4 (66-112)||(42177340-42177386)
chr4 (1-110)||(49286688-49286797)
chr4 (10-107)||(408369-408466)
chr4 (10-106)||(25607694-25607790)
chr4 (12-112)||(31975858-31975958)
chr4 (12-104)||(17616413-17616505)
chr4 (67-111)||(29582329-29582373)
chr4 (66-110)||(52592155-52592199)
[»] scaffold0113 (1 HSPs)
scaffold0113 (1-110)||(29541-29651)
[»] scaffold0604 (1 HSPs)
scaffold0604 (4-109)||(2320-2425)
[»] scaffold0283 (1 HSPs)
scaffold0283 (66-110)||(6600-6644)
[»] scaffold0077 (2 HSPs)
scaffold0077 (66-110)||(48371-48415)
scaffold0077 (66-110)||(58126-58170)
[»] scaffold0008 (1 HSPs)
scaffold0008 (10-110)||(45379-45479)
[»] scaffold0460 (1 HSPs)
scaffold0460 (1-37)||(8631-8667)
[»] scaffold0059 (1 HSPs)
scaffold0059 (28-104)||(70700-70776)


Alignment Details
Target: chr8 (Bit Score: 196; Significance: 1e-106; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 111 - 333
Target Start/End: Original strand, 29718138 - 29718358
Alignment:
Q  111 atctaaccaataaaccttttaatttgctaaccccaaaaagtaaaaacataggagatgatgagtctgaaagagtaaacattactcattcaatctcacacac 210  Q
    ||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  29718138 atctaaccaata--ccttttaatttgctaaccccaaaaggtaaaaacataggagatgatgagtctcaaagagtaaacattactcattcaatctcacacac 29718235  T
Q  211 ccatatgtaagttagtttgtcaaacgactatataaatgtttaaagcaagcaataatttttcgatgtggaacacacattatgtaaaatacaacccttccga 310  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||     
T  29718236 ccatatgtaagttagtttgtcaaacgactatataaatgtttaaagcaagcaataatttttcgatgtggaactcacattatgtaaaatacaacccttccgg 29718335  T
Q  311 ttctagtttcagtaactcaattt 333  Q
    |||||||||||||||||||||||    
T  29718336 ttctagtttcagtaactcaattt 29718358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 37465980 - 37466089
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgt 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||| |||| ||||||||||||||||| ||||||||    
T  37465980 taaatatcaacaaatagctttttattccataaaaataatagttaatttaaagatttttgaagtaggagcaccgttacaccttaatttgcggttgtaccgt 37466079  T
Q  101 agaagttccc 110  Q
    ||||||||||    
T  37466080 agaagttccc 37466089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 16323855 - 16323954
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||| ||||||||||    
T  16323855 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtaggagtatcggtacaccttaatttgcaggtgtaccgt 16323954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 529567 - 529677
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgt 100  Q
    |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||| ||||| |||||||| ||||||| ||||||||||||    
T  529567 taaatatcaacaaataactctttattctataaaaataatagttaatttaaagatttttgaagtaggagtatcgatacactttaatttacgggtgtaccgt 529666  T
Q  101 agaagttccca 111  Q
    |||||||||||    
T  529667 agaagttccca 529677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 17642370 - 17642479
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgt 100  Q
    ||||||||||||||||||| |||||| ||||||||| |||||||||||| | |||||| ||||| |||||||| ||||||||||||||||||||||||||    
T  17642370 taaatatcaacaaatagctttttatttcataaaaatgatagttaatttataaatttttgaagtaagagtaccggtacaccttaatttgcgggtgtaccgt 17642469  T
Q  101 agaagttccc 110  Q
    ||||||||||    
T  17642470 agaagttccc 17642479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 39347241 - 39347146
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgta 96  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||| || ||||||||||||||||||||||    
T  39347241 taaatatcaacaaatagctctttatttcataaaaataatagttaatttaaagatttttgaagtaggagtatcggtacaccttaatttgcgggtgta 39347146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 13483014 - 13482912
Alignment:
Q  4 atatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgtaga 103  Q
    ||||||||||||||  |||||||||| |||||||||||||||||||||||||||| ||||| ||||| ||||| ||||||||||||||||||||||||||    
T  13483014 atatcaacaaatagtactttattccaaaaaaataatagttaatttaaagatttttgaagtaggagta-cgatataccttaatttgcgggtgtaccgtaga 13482916  T
Q  104 agtt 107  Q
    ||||    
T  13482915 agtt 13482912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 43485160 - 43485053
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgt 100  Q
    ||||||| |||||||||| ||||||||||||||||||||| ||||||||||  ||||| || ||  ||||||| ||||||||||||||||||||||||||    
T  43485160 taaatattaacaaatagcactttattccataaaaataatatttaatttaaatttttttgaaataaaagtaccggtacaccttaatttgcgggtgtaccgt 43485061  T
Q  101 agaagttc 108  Q
    ||||||||    
T  43485060 agaagttc 43485053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 2273307 - 2273412
Alignment:
Q  2 aaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgta 101  Q
    |||||||||||||||||| |||||| ||||||||| | |||||||||| | |||||| ||||| |||||||| ||||||||||||||| |||||||||||    
T  2273307 aaatatcaacaaatagctttttatttcataaaaatgacagttaatttataaatttttgaagtaagagtaccggtacaccttaatttgcaggtgtaccgta 2273406  T
Q  102 gaagtt 107  Q
    ||||||    
T  2273407 gaagtt 2273412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 43049832 - 43049941
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgt 100  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| |||||||| ||||| |||||  | ||||||||||||| ||| ||||||||    
T  43049832 taaatatcaacaaatagctctttatttcataaaaataatagttaatttatagatttttgaagtaagagtattggtacaccttaatttacggatgtaccgt 43049931  T
Q  101 agaagttccc 110  Q
    | | ||||||    
T  43049932 aaacgttccc 43049941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 26439632 - 26439509
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaa--------------agtatgagtaccgatacaccttaatt 86  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||              |||| |||||||||||||||||||||    
T  26439632 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtagaatttttaaagtaggagtaccgatacaccttaatt 26439533  T
Q  87 tgcgggtgtaccgtagaagttccc 110  Q
    || || ||||||||||||||||||    
T  26439532 tgtggatgtaccgtagaagttccc 26439509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 19718428 - 19718333
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgt 100  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| |        |||||||||||||||||||||||| |    
T  19718428 taaatatcaacaaatagctctttatttcataaaaataatagttaatttatagatttttaaagtaag--------tacaccttaatttgcgggtgtaccat 19718337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 36886271 - 36886168
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgt 100  Q
    |||||||||||||||||||||||||| || |||||| |||||||||||| | ||||||||| || |||||||| |||| |||| ||||||| |||| |||    
T  36886271 taaatatcaacaaatagctctttatttcaaaaaaatgatagttaatttatatatttttaaattaagagtaccggtacatcttattttgcggatgtatcgt 36886172  T
Q  101 agaa 104  Q
    ||||    
T  36886171 agaa 36886168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 107
Target Start/End: Complemental strand, 42444348 - 42444244
Alignment:
Q  2 aaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgta 101  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||| || ||||||||||| |   |||| || |||||||||||||| |||||||  |||    
T  42444348 aaatatcaacaaatagctctttatttcataaaaatgatagttaatatatagatttttaaaattaaagta-cggtacaccttaatttgtgggtgtatagta 42444250  T
Q  102 gaagtt 107  Q
    ||||||    
T  42444249 gaagtt 42444244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 30 - 110
Target Start/End: Original strand, 2732109 - 2732189
Alignment:
Q  30 taaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgtagaagttccc 110  Q
    |||||||||||||||||||||| |||||| ||||| |||||| | ||||||||||||||||| ||||||| |||| |||||    
T  2732109 taaaaataatagttaatttaaatatttttgaagtaggagtacaggtacaccttaatttgcggatgtaccgaagaaattccc 2732189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 104
Target Start/End: Original strand, 43921428 - 43921531
Alignment:
Q  2 aaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaa-tttgcgggtgtaccgt 100  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||| || |||||||| ||||| ||||| |  || | ||||| ||||| ||||||||||    
T  43921428 aaatatcaacaaatagctctttatttcataaaaatgatagttaatgtatagatttttgaagtaagagtatcagtatatcttaattttgcaggtgtaccgt 43921527  T
Q  101 agaa 104  Q
    ||||    
T  43921528 agaa 43921531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 31158861 - 31158960
Alignment:
Q  11 caaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgtagaagttccc 110  Q
    |||||| || |||||| ||||||| |||| ||||||||| ||||||   ||| | |||||| ||||||||| |||||||| |||||||||||||||||||    
T  31158861 caaataactatttatttcataaaattaatcgttaatttatagatttaggaagcaagagtactgatacacctcaatttgcgagtgtaccgtagaagttccc 31158960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 39029613 - 39029719
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgt 100  Q
    |||||||||||||| | ||||||||| ||||| ||||| | |||||||| ||| |||| ||||| || ||| | ||||| ||||||||| | ||||||||    
T  39029613 taaatatcaacaaacaactctttatttcataataataacaattaatttatagaattttgaagtaagaatactggtacactttaatttgcagatgtaccgt 39029712  T
Q  101 agaagtt 107  Q
    |||||||    
T  39029713 agaagtt 39029719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 4475329 - 4475406
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgataca 78  Q
    ||||||||||  ||||||||||| || |||||| |||||| ||||||||||||||||| ||||| |||||| ||||||    
T  4475329 taaatatcaattaatagctctttgtttcataaatataataattaatttaaagatttttgaagtaggagtacagataca 4475406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 66 - 110
Target Start/End: Original strand, 34332473 - 34332517
Alignment:
Q  66 gagtaccgatacaccttaatttgcgggtgtaccgtagaagttccc 110  Q
    |||||||| ||||||||||||||||||||||||||||||||||||    
T  34332473 gagtaccggtacaccttaatttgcgggtgtaccgtagaagttccc 34332517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 66 - 110
Target Start/End: Complemental strand, 39171042 - 39170998
Alignment:
Q  66 gagtaccgatacaccttaatttgcgggtgtaccgtagaagttccc 110  Q
    |||||||| ||||||||||||||||||||||||||||||||||||    
T  39171042 gagtaccggtacaccttaatttgcgggtgtaccgtagaagttccc 39170998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 66 - 109
Target Start/End: Original strand, 23286927 - 23286970
Alignment:
Q  66 gagtaccgatacaccttaatttgcgggtgtaccgtagaagttcc 109  Q
    |||||||| |||||||||||||||||||||||||||||||||||    
T  23286927 gagtaccggtacaccttaatttgcgggtgtaccgtagaagttcc 23286970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 66 - 110
Target Start/End: Original strand, 946333 - 946377
Alignment:
Q  66 gagtaccgatacaccttaatttgcgggtgtaccgtagaagttccc 110  Q
    |||||||| |||||| |||||||||||||||||||||||||||||    
T  946333 gagtaccggtacaccgtaatttgcgggtgtaccgtagaagttccc 946377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 66 - 110
Target Start/End: Original strand, 28090552 - 28090596
Alignment:
Q  66 gagtaccgatacaccttaatttgcgggtgtaccgtagaagttccc 110  Q
    |||||||| |||||||||| |||||||||||||||||||||||||    
T  28090552 gagtaccggtacaccttaaattgcgggtgtaccgtagaagttccc 28090596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 66 - 110
Target Start/End: Original strand, 29459997 - 29460041
Alignment:
Q  66 gagtaccgatacaccttaatttgcgggtgtaccgtagaagttccc 110  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||    
T  29459997 gagtaccggtacaccttaatttgcaggtgtaccgtagaagttccc 29460041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 66 - 110
Target Start/End: Original strand, 44935260 - 44935304
Alignment:
Q  66 gagtaccgatacaccttaatttgcgggtgtaccgtagaagttccc 110  Q
    |||||||| |||||||||| |||||||||||||||||||||||||    
T  44935260 gagtaccggtacaccttaaattgcgggtgtaccgtagaagttccc 44935304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 67 - 110
Target Start/End: Original strand, 29773807 - 29773850
Alignment:
Q  67 agtaccgatacaccttaatttgcgggtgtaccgtagaagttccc 110  Q
    ||||||| |||||||||| |||||||||||||||||||||||||    
T  29773807 agtaccggtacaccttaaattgcgggtgtaccgtagaagttccc 29773850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 112
Target Start/End: Complemental strand, 36672099 - 36672008
Alignment:
Q  21 tttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgtagaagttcccat 112  Q
    |||||| ||||||| | ||||||| |||| |||||| | ||| | |||||||| ||||||| ||||| || ||||||| |||||||||||||    
T  36672099 tttatttcataaaattgatagttagtttatagatttatgaagcaagagtaccggtacacctcaatttacgagtgtaccatagaagttcccat 36672008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 111
Target Start/End: Original strand, 23274995 - 23275031
Alignment:
Q  75 tacaccttaatttgcgggtgtaccgtagaagttccca 111  Q
    |||||||||||||||||||||| ||||||||||||||    
T  23274995 tacaccttaatttgcgggtgtatcgtagaagttccca 23275031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 110
Target Start/End: Original strand, 37511451 - 37511495
Alignment:
Q  66 gagtaccgatacaccttaatttgcgggtgtaccgtagaagttccc 110  Q
    |||||||| ||||||||||||| ||| ||||||||||||||||||    
T  37511451 gagtaccggtacaccttaatttacggatgtaccgtagaagttccc 37511495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 29454253 - 29454142
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaa-taatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccg 99  Q
    |||||||  |||||||| | |||||| |||||||| | || ||||||||| | | || | ||| | |||||||| ||||||||| |||| | ||||||||    
T  29454253 taaatattgacaaatagttatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtaccggtacaccttactttgtgagtgtaccg 29454154  T
Q  100 tagaagttccca 111  Q
    ||||||||||||    
T  29454153 tagaagttccca 29454142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 107
Target Start/End: Original strand, 6631431 - 6631516
Alignment:
Q  22 ttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgtagaagtt 107  Q
    ||||| ||||||| | || |||| |||| |||||| | ||| | |||||||||||||||| ||||| || |||||||||| |||||    
T  6631431 ttatttcataaaattgatcgttagtttatagatttatgaagcaagagtaccgatacacctcaatttacgagtgtaccgtataagtt 6631516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 51 - 110
Target Start/End: Complemental strand, 6799843 - 6799783
Alignment:
Q  51 agatttttaaagtatgagtaccgatacaccttaattt-gcgggtgtaccgtagaagttccc 110  Q
    |||||||| ||||| ||||  || ||||||||||||| || ||||||||||||||||||||    
T  6799843 agatttttgaagtaagagtggcggtacaccttaattttgcaggtgtaccgtagaagttccc 6799783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 66 - 110
Target Start/End: Complemental strand, 15725934 - 15725890
Alignment:
Q  66 gagtaccgatacaccttaatttgcgggtgtaccgtagaagttccc 110  Q
    ||||| || |||||| |||||||| ||||||||||||||||||||    
T  15725934 gagtatcggtacaccgtaatttgcaggtgtaccgtagaagttccc 15725890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 66 - 110
Target Start/End: Original strand, 17792566 - 17792610
Alignment:
Q  66 gagtaccgatacaccttaatttgcgggtgtaccgtagaagttccc 110  Q
    ||||||||||||||||||||||  | ||||||| |||||||||||    
T  17792566 gagtaccgatacaccttaatttatgagtgtaccatagaagttccc 17792610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 66 - 110
Target Start/End: Complemental strand, 29229220 - 29229176
Alignment:
Q  66 gagtaccgatacaccttaatttgcgggtgtaccgtagaagttccc 110  Q
    |||||||| |||||| |||||| ||||||||||||||||| ||||    
T  29229220 gagtaccggtacaccgtaatttacgggtgtaccgtagaagatccc 29229176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 87
Target Start/End: Complemental strand, 42164998 - 42164931
Alignment:
Q  19 tctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaattt 87  Q
    |||||||| ||||||| |||| ||||| ||| | |||||||||||||||||| || ||||||| |||||    
T  42164998 tctttatttcataaaa-taatcgttaaattataaatttttaaagtatgagtatcggtacacctcaattt 42164931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 94; Significance: 8e-46; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 21288922 - 21288813
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgt 100  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  21288922 taaatatcaacaaatagctctatattccataaaaataatagttaatttaaagatttttgaagtaggagtaccgatacaccttaatttgcgggtgtaccgt 21288823  T
Q  101 agaagttccc 110  Q
    |||| |||||    
T  21288822 agaaattccc 21288813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 788582 - 788473
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||    
T  788582 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttgaagtaggagtaccggtacaccttaatttgcgggtgtaccgt 788483  T
Q  101 agaagttccc 110  Q
    | || |||||    
T  788482 aaaaattccc 788473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 27647777 - 27647886
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgt 100  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || || ||||||| |||||||||||||||||||||||||||    
T  27647777 taaatatcaacaaatatctctttattccataaaaataatagttaatttaaagatttttgaaataggagtaccaatacaccttaatttgcgggtgtaccgt 27647876  T
Q  101 agaagttccc 110  Q
    ||||||||||    
T  27647877 agaagttccc 27647886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 3082287 - 3082178
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgt 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||| |    
T  3082287 taaatatcaacaaatagctttttattccataaaaataatagttaatttaaagatttttgaagtaggagtaccgatacaccttaatttgcggatgtaccat 3082188  T
Q  101 agaagttccc 110  Q
    |||| |||||    
T  3082187 agaaattccc 3082178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 19547785 - 19547896
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaa-taatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccg 99  Q
    ||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||    
T  19547785 taaatattaacaaatagctctttattccataaaaaataataattaatttaaagatttttaaagtaggagtaccggtacaccttaatttgtgggtgtaccg 19547884  T
Q  100 tagaagttccca 111  Q
    ||||||||||||    
T  19547885 tagaagttccca 19547896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 25592123 - 25592012
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccga--tacaccttaatttgcgggtgtacc 98  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| ||||| |||||||||  ||||||||||||| ||||||||||    
T  25592123 taaatatcaacaaatagttctttattccataaaaataatagttaattaaaagatttttgaagtaggagtaccgatgtacaccttaatttacgggtgtacc 25592024  T
Q  99 gtagaagttccc 110  Q
    ||||||||||||    
T  25592023 gtagaagttccc 25592012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 53516691 - 53516583
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||| ||||||||||||||| |||||||| |    
T  53516691 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaaattttttaaagtaagagtaccggtacaccttaatttgcaggtgtaccat 53516592  T
Q  101 agaagttcc 109  Q
    |||| ||||    
T  53516591 agaaattcc 53516583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 29629092 - 29628986
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgt 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||| ||||||||||||||||||||||| || |||| |||    
T  29629092 taaatatcaacaaatagctctttattccaaaaaaataatagttaatttaaagagttttgaagtaggagtaccgatacaccttaatttgtggatgtatcgt 29628993  T
Q  101 agaagtt 107  Q
    |||||||    
T  29628992 agaagtt 29628986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 4663255 - 4663146
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgt 100  Q
    |||||||||||||||||| || ||||| |||||||||||||||||||||||  ||||||||| |||||||||| ||||||||||||||||| ||||||||    
T  4663255 taaatatcaacaaatagcactatattctataaaaataatagttaatttaaatttttttaaagcatgagtaccggtacaccttaatttgcggatgtaccgt 4663156  T
Q  101 agaagttccc 110  Q
    ||||||||||    
T  4663155 agaagttccc 4663146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 52082152 - 52082045
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgt 100  Q
    |||||||||||||||| || |||||| |||||||||||||||| ||||| | |||||| ||||| |||||||| ||||||||||||||||||||||||||    
T  52082152 taaatatcaacaaataactttttatttcataaaaataatagttcatttataaatttttgaagtaagagtaccggtacaccttaatttgcgggtgtaccgt 52082053  T
Q  101 agaagttc 108  Q
    ||||||||    
T  52082052 agaagttc 52082045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 3136559 - 3136647
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgc 89  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||| ||||| |||||||||    
T  3136559 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaaggtttttgaagtaggagtaccggtacactttaatttgc 3136647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 7672097 - 7672198
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgt 100  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||| ||| |  ||| ||||| |||||||| ||||||||||||| ||| ||||||||    
T  7672097 taaatatcaacaaatatctctttattccgtaaaaataatagttaattaaaaaaaatttgaagtaggagtaccggtacaccttaatttacggatgtaccgt 7672196  T
Q  101 ag 102  Q
    ||    
T  7672197 ag 7672198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 13 - 88
Target Start/End: Complemental strand, 43714099 - 43714024
Alignment:
Q  13 aatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttg 88  Q
    |||||||||||||| |||||||||||||||||||||||| |||||| ||||| || ||||||||||| ||||||||    
T  43714099 aatagctctttatttcataaaaataatagttaatttaaaaatttttgaagtaggaataccgatacacattaatttg 43714024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 66 - 111
Target Start/End: Original strand, 11140607 - 11140652
Alignment:
Q  66 gagtaccgatacaccttaatttgcgggtgtaccgtagaagttccca 111  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  11140607 gagtaccggtacaccttaatttgcgggtgtaccgtagaagttccca 11140652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 21 - 110
Target Start/End: Original strand, 29806326 - 29806415
Alignment:
Q  21 tttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgtagaagttccc 110  Q
    |||||| ||||||| |||| ||||||||| ||||||   ||| | |||||||| ||||||| |||||||| |||||||||||||||||||    
T  29806326 tttatttcataaaattaattgttaatttatagatttaggaagcaagagtaccggtacacctcaatttgcgagtgtaccgtagaagttccc 29806415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 35375621 - 35375509
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcg-ggtgtaccg 99  Q
    |||||||  |||||||||||||||||  ||| |||| || ||||||||| | |||| | ||  | |||||||||||||||| |||||| | |||||||||    
T  35375621 taaatattgacaaatagctctttatttaatataaatgattgttaatttataaatttatgaatcaagagtaccgatacacctcaatttgtgaggtgtaccg 35375522  T
Q  100 tagaagttcccat 112  Q
    |||||||||||||    
T  35375521 tagaagttcccat 35375509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 32717949 - 32718004
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagattt 56  Q
    |||||||||||||||| || |||||| |||||||||||||||| ||||||||||||    
T  32717949 taaatatcaacaaataactttttatttcataaaaataatagttcatttaaagattt 32718004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 66 - 109
Target Start/End: Original strand, 42067941 - 42067984
Alignment:
Q  66 gagtaccgatacaccttaatttgcgggtgtaccgtagaagttcc 109  Q
    |||||||| |||||||||||||||||||||||||||||||||||    
T  42067941 gagtaccggtacaccttaatttgcgggtgtaccgtagaagttcc 42067984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 45518925 - 45519003
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacac 79  Q
    |||||||||| ||||| ||||||||| | | |||||||||||||||||||| |||||| ||||  |||||||| |||||    
T  45518925 taaatatcaataaatatctctttatttcttcaaaataatagttaatttaaaaatttttgaagtgggagtaccggtacac 45519003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 66 - 111
Target Start/End: Complemental strand, 29786577 - 29786532
Alignment:
Q  66 gagtaccgatacaccttaatttgcgggtgtaccgtagaagttccca 111  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||    
T  29786577 gagtaccggtacaccttaatttgcaggtgtaccgtagaagttccca 29786532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 110
Target Start/End: Original strand, 9252159 - 9252259
Alignment:
Q  10 acaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgtagaagttcc 109  Q
    ||||||| || |||||| ||||||| | || ||||||||| |||| | | ||| | |||||||| ||||||| ||||| || ||||||||||||||||||    
T  9252159 acaaataactatttatttcataaaattgatcgttaatttatagatatatgaagcaagagtaccggtacacctcaatttacgagtgtaccgtagaagttcc 9252258  T
Q  110 c 110  Q
    |    
T  9252259 c 9252259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 66 - 110
Target Start/End: Complemental strand, 42363972 - 42363928
Alignment:
Q  66 gagtaccgatacaccttaatttgcgggtgtaccgtagaagttccc 110  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||    
T  42363972 gagtaccgatacaccgtaatttgcaggtgtaccgtagaagttccc 42363928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 111
Target Start/End: Complemental strand, 4817174 - 4817075
Alignment:
Q  12 aaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgtagaagttccca 111  Q
    ||||| || |||||| ||||||||| || ||||||||| | | || ||||||| |||||||| ||||||| | |||| | ||||||||||||| ||||||    
T  4817174 aaataactatttattacataaaaatgatcgttaatttataaaattataaagtaagagtaccggtacacctcattttgtgagtgtaccgtagaaattccca 4817075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 45602123 - 45602024
Alignment:
Q  11 caaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgtagaagttccc 110  Q
    |||||| || |||||| ||||||| |||| ||||||||| ||||||   ||| | || ||||||||||||| |||||||| |||||| ||| ||||||||    
T  45602123 caaataactatttatttcataaaattaatcgttaatttatagatttaagaagcaagaataccgatacacctcaatttgcgagtgtacagtataagttccc 45602024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 111
Target Start/End: Original strand, 37492258 - 37492303
Alignment:
Q  66 gagtaccgatacaccttaatttgcgggtgtaccgtagaagttccca 111  Q
    |||||||| |||||| |||||||||| |||||||||||||||||||    
T  37492258 gagtaccggtacaccgtaatttgcggatgtaccgtagaagttccca 37492303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 67 - 112
Target Start/End: Complemental strand, 39629991 - 39629946
Alignment:
Q  67 agtaccgatacaccttaatttgcgggtgtaccgtagaagttcccat 112  Q
    ||||||| |||| |||||||||||| ||||||||||||||||||||    
T  39629991 agtaccggtacatcttaatttgcggatgtaccgtagaagttcccat 39629946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 110
Target Start/End: Complemental strand, 38785126 - 38785082
Alignment:
Q  66 gagtaccgatacaccttaatttgcgggtgtaccgtagaagttccc 110  Q
    |||||||| |||||| |||||||| ||||||||||||||||||||    
T  38785126 gagtaccggtacaccgtaatttgcaggtgtaccgtagaagttccc 38785082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 41982281 - 41982389
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaa-taatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccg 99  Q
    |||||||  ||||||| || |||||| |||||||| | || || |||||| | | || ||||||| |||||||||||||||| | |||| | ||||||||    
T  41982281 taaatattgacaaataactatttattacataaaaaattatcgtcaatttataaaattataaagtaagagtaccgatacacctcactttgtgagtgtaccg 41982380  T
Q  100 tagaagttc 108  Q
    |||||||||    
T  41982381 tagaagttc 41982389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 111
Target Start/End: Original strand, 43903381 - 43903480
Alignment:
Q  12 aaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcg-ggtgtaccgtagaagttccc 110  Q
    ||||| ||||||||| ||||||| |||| ||||| ||  | || ||| ||| | |||||||||||||||| |||||| | ||||||||||||||||||||    
T  43903381 aaataactctttatttcataaaa-taatcgttaaattgtaaatatttgaaggaggagtaccgatacacctcaatttgtgaggtgtaccgtagaagttccc 43903479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 110
Target Start/End: Original strand, 44365971 - 44366015
Alignment:
Q  66 gagtaccgatacaccttaatttgcgggtgtaccgtagaagttccc 110  Q
    |||||||| ||||||||||||| |||||||||| |||||||||||    
T  44365971 gagtaccggtacaccttaatttacgggtgtaccatagaagttccc 44366015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 110
Target Start/End: Original strand, 46959914 - 46959958
Alignment:
Q  66 gagtaccgatacaccttaatttgcgggtgtaccgtagaagttccc 110  Q
    ||||||||||||||| |||||||| ||||||||||| ||||||||    
T  46959914 gagtaccgatacaccgtaatttgcaggtgtaccgtaaaagttccc 46959958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 110
Target Start/End: Complemental strand, 29698420 - 29698322
Alignment:
Q  12 aaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcg-ggtgtaccgtagaagttccc 110  Q
    ||||| ||||||||| ||||||| |||| ||||| ||  | || ||||||| | |||||||| ||||||| |||||| | ||||||||||||||||||||    
T  29698420 aaataactctttatttcataaaa-taatcgttaaattgtaaatatttaaagcaggagtaccggtacacctcaatttgtgaggtgtaccgtagaagttccc 29698322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 111
Target Start/End: Complemental strand, 54262646 - 54262543
Alignment:
Q  8 caacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgtagaagtt 107  Q
    ||||||||| || |||||| ||||||| | || ||||||||| ||||||   ||| | ||||| || |||||| |||||| | | |||||||||||||||    
T  54262646 caacaaataactatttatttcataaaattgattgttaatttatagatttaagaagcaagagtatcggtacaccataatttactgatgtaccgtagaagtt 54262547  T
Q  108 ccca 111  Q
    ||||    
T  54262546 ccca 54262543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 1129239 - 1129129
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaa-taatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccg 99  Q
    |||||||  |||||||||| |||||| |||||||| | || ||||||||| | | || | ||| | |||||||| ||||||| | |||| | ||||||||    
T  1129239 taaatattgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtaccggtacacctcactttgtgagtgtaccg 1129140  T
Q  100 tagaagttccc 110  Q
    |||||||||||    
T  1129139 tagaagttccc 1129129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 52776558 - 52776453
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcg-ggtgtaccg 99  Q
    ||||||| || |||||  |||||||| ||||||| |||| ||||| ||| | |||||| || ||||||||||| ||||||| |||||  | |||||||||    
T  52776558 taaatattaataaataattctttatttcataaaa-taatcgttaaattataaatttttgaaatatgagtaccggtacacctcaatttatgaggtgtaccg 52776460  T
Q  100 tagaagt 106  Q
    |||||||    
T  52776459 tagaagt 52776453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 87
Target Start/End: Original strand, 19914340 - 19914417
Alignment:
Q  10 acaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaattt 87  Q
    ||||||| || |||||| ||||||| | || ||||||||| |||||| | ||| | |||||||| |||||||||||||    
T  19914340 acaaataactatttatttcataaaattgatcgttaatttatagatttatgaagcaagagtaccggtacaccttaattt 19914417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 111
Target Start/End: Complemental strand, 29347355 - 29347310
Alignment:
Q  66 gagtaccgatacaccttaatttgcgggtgtaccgtagaagttccca 111  Q
    |||||||| |||||   |||||||||||||||||||||||||||||    
T  29347355 gagtaccggtacactgcaatttgcgggtgtaccgtagaagttccca 29347310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 82 - 110
Target Start/End: Complemental strand, 876250 - 876222
Alignment:
Q  82 taatttgcgggtgtaccgtagaagttccc 110  Q
    |||||||||||||||||||||||||||||    
T  876250 taatttgcgggtgtaccgtagaagttccc 876222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 104
Target Start/End: Original strand, 8324696 - 8324788
Alignment:
Q  12 aaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgtagaa 104  Q
    ||||| ||||||||  ||||||||| || ||||| ||| |||||| | || || | |||| | ||||||||||||  ||||||||||||||||    
T  8324696 aaatatctctttatcacataaaaattatcgttaacttatagatttatgaaataggtgtactggtacaccttaattgacgggtgtaccgtagaa 8324788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 66 - 110
Target Start/End: Original strand, 8966293 - 8966337
Alignment:
Q  66 gagtaccgatacaccttaatttgcgggtgtaccgtagaagttccc 110  Q
    |||||||| |||||||||||||  | |||||||||||||||||||    
T  8966293 gagtaccggtacaccttaatttatgagtgtaccgtagaagttccc 8966337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 66 - 117
Target Start/End: Complemental strand, 14998192 - 14998140
Alignment:
Q  66 gagtaccgatacaccttaatttgcg-ggtgtaccgtagaagttcccatctaac 117  Q
    |||||||||||||||  |||||| | |||||||||||||||||||||| ||||    
T  14998192 gagtaccgatacaccacaatttgtgaggtgtaccgtagaagttcccatttaac 14998140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 110
Target Start/End: Complemental strand, 35748990 - 35748922
Alignment:
Q  42 ttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgtagaagttccc 110  Q
    |||||||| |||||| | ||| | ||||||||||||||||  |||| || ||||| |||||||||||||    
T  35748990 ttaatttatagatttatgaagcaagagtaccgatacacctctatttacgagtgtatcgtagaagttccc 35748922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 110
Target Start/End: Complemental strand, 48795511 - 48795439
Alignment:
Q  39 tagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcg-ggtgtaccgtagaagttccc 110  Q
    ||||||||||| | |||| |  |||| |||||||| ||||||| |||||| | ||||||||||||||||||||    
T  48795511 tagttaatttataaatttatggagtaagagtaccggtacacctcaatttgtgaggtgtaccgtagaagttccc 48795439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 104
Target Start/End: Original strand, 54911056 - 54911148
Alignment:
Q  12 aaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgtagaa 104  Q
    ||||| ||||||||  ||||||||| || ||||||||| | |||| |||| || | |||| | ||||||||||||   |||||||||||||||    
T  54911056 aaatatctctttatcacataaaaattatcgttaatttataaatttataaaataggtgtactggtacaccttaattgaagggtgtaccgtagaa 54911148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 93; Significance: 3e-45; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 15383312 - 15383204
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgt 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||    
T  15383312 taaatatcaacaaatagctttttattccataaaaataatagttaatttaaagatttttgaagtaggagtaccggtacaccttaatttgcgggtgtaccgt 15383213  T
Q  101 agaagttcc 109  Q
    |||||||||    
T  15383212 agaagttcc 15383204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 8376129 - 8376024
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgt 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| || ||||| ||||||||||||||||| |||||||||||    
T  8376129 taaatatcaacaaatagctttttattccataaaaataatagttaatttaaaaatttttaaaataggagtatcgatacaccttaatttgtgggtgtaccgt 8376030  T
Q  101 agaagt 106  Q
    ||||||    
T  8376029 agaagt 8376024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 6265052 - 6264943
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgt 100  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||| ||||| ||||||||||||| ||||||||| || ||||||||    
T  6265052 taaatatcaacaaatagttctttattccataaaaataatagttaattagaagatttttgaagtaggagtaccgatacatcttaatttgtggatgtaccgt 6264953  T
Q  101 agaagttccc 110  Q
    ||||||||||    
T  6264952 agaagttccc 6264943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 17010659 - 17010767
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgt 100  Q
    |||||||||||||||| |||||||| | |||||| ||||||||||||||||||||||| ||||| |||||||||||||| ||||||| ||||||||| ||    
T  17010659 taaatatcaacaaataactctttatcctataaaattaatagttaatttaaagatttttgaagtaggagtaccgatacactttaatttacgggtgtacggt 17010758  T
Q  101 agaagttcc 109  Q
    |||||||||    
T  17010759 agaagttcc 17010767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 22 - 111
Target Start/End: Complemental strand, 34195967 - 34195878
Alignment:
Q  22 ttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgtagaagttccca 111  Q
    ||||||||||||||||||||||||||||||||||||| |||||  ||||||| ||||||||||||||||| |||||||||||||||||||    
T  34195967 ttattccataaaaataatagttaatttaaagatttttgaagtagaagtaccggtacaccttaatttgcggatgtaccgtagaagttccca 34195878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 30020466 - 30020379
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttg 88  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||| || ||||||||| ||||    
T  30020466 taaatatcaacaaatagttctttatttcataaaaataatagttaatttaaagatttttaaagtaggagtatcggtacaccttactttg 30020379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 20469144 - 20469034
Alignment:
Q  2 aaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgta 101  Q
    ||||||||| ||||||||||||||| ||||||||| |||||||||||| |||||||| ||||| |||||||  |||||||||||||   |||||| ||||    
T  20469144 aaatatcaataaatagctctttatttcataaaaatgatagttaatttatagatttttgaagtaagagtacccgtacaccttaatttataggtgtatcgta 20469045  T
Q  102 gaagttcccat 112  Q
    ||| |||||||    
T  20469044 gaaattcccat 20469034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 110
Target Start/End: Complemental strand, 31644510 - 31644410
Alignment:
Q  10 acaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgtagaagttcc 109  Q
    ||||||| || |||||| ||||||| | || |||| |||| |||||| | ||| | |||||||||||||||| ||||| || ||||||||||||||||||    
T  31644510 acaaataactatttatttcataaaattgattgttagtttatagatttatgaagcaagagtaccgatacacctcaatttacgagtgtaccgtagaagttcc 31644411  T
Q  110 c 110  Q
    |    
T  31644410 c 31644410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 66 - 110
Target Start/End: Original strand, 2259266 - 2259310
Alignment:
Q  66 gagtaccgatacaccttaatttgcgggtgtaccgtagaagttccc 110  Q
    |||||||  ||||||||||||||||||||||||||||||||||||    
T  2259266 gagtacctgtacaccttaatttgcgggtgtaccgtagaagttccc 2259310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 66 - 110
Target Start/End: Original strand, 6848876 - 6848920
Alignment:
Q  66 gagtaccgatacaccttaatttgcgggtgtaccgtagaagttccc 110  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||    
T  6848876 gagtaccggtacaccttaatttacgggtgtaccgtagaagttccc 6848920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 110
Target Start/End: Complemental strand, 29023719 - 29023619
Alignment:
Q  10 acaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgtagaagttcc 109  Q
    ||||||| || |||||| ||||||| | || |||| |||| |||||| | ||| | |||||||| ||||||| ||||| || ||||||||||||||||||    
T  29023719 acaaataactatttatttcataaaattgatcgttagtttatagatttatgaagcaagagtaccggtacacctcaatttacgagtgtaccgtagaagttcc 29023620  T
Q  110 c 110  Q
    |    
T  29023619 c 29023619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 112
Target Start/End: Complemental strand, 10887888 - 10887807
Alignment:
Q  32 aaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcg-ggtgtaccgtagaagttcccat 112  Q
    |||||||| ||||| ||| | |||||| ||||| |||||||| ||||||| |||||  | ||||||||||||||||||||||    
T  10887888 aaaataatcgttaaattataaatttttgaagtaggagtaccggtacacctcaatttatgaggtgtaccgtagaagttcccat 10887807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 111
Target Start/End: Original strand, 19473980 - 19474079
Alignment:
Q  12 aaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcg-ggtgtaccgtagaagttccc 110  Q
    ||||| ||||||||| ||||||| |||| ||||| || || || ||| ||| | |||||||| ||||||| |||||| | ||||||||||||||||||||    
T  19473980 aaataactctttatttcataaaa-taattgttaaattgaaaatatttgaagcaagagtaccggtacacctcaatttgtgaggtgtaccgtagaagttccc 19474078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 110
Target Start/End: Original strand, 21970613 - 21970713
Alignment:
Q  10 acaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgtagaagttcc 109  Q
    ||||||| || |||||| ||||||| | || ||||||||| ||||||   ||||| |||||||| ||||||  |||||  | ||||||||||||||||||    
T  21970613 acaaataactatttatttcataaaattgatcgttaatttatagatttaggaagtaagagtaccggtacaccagaatttatgagtgtaccgtagaagttcc 21970712  T
Q  110 c 110  Q
    |    
T  21970713 c 21970713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 67 - 110
Target Start/End: Original strand, 24213275 - 24213318
Alignment:
Q  67 agtaccgatacaccttaatttgcgggtgtaccgtagaagttccc 110  Q
    |||||||||| ||| ||||||||||||||||||||||| |||||    
T  24213275 agtaccgatataccgtaatttgcgggtgtaccgtagaaattccc 24213318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 110
Target Start/End: Original strand, 4509737 - 4509835
Alignment:
Q  12 aaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgtagaagttccc 110  Q
    |||||||| |||||| ||||||||  || ||||||||| | | || | ||| | |||||||| ||||||| | |||| | |||||||||||||||||||    
T  4509737 aaatagctatttattacataaaaaatatcgttaatttataaaattatgaagcaggagtaccggtacacctcactttgtgagtgtaccgtagaagttccc 4509835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 112
Target Start/End: Complemental strand, 8401458 - 8401412
Alignment:
Q  66 gagtaccgatacaccttaatttgcgggtgtaccgtagaagttcccat 112  Q
    ||||| || |||||| ||||||||||||||||||||||| |||||||    
T  8401458 gagtagcggtacaccgtaatttgcgggtgtaccgtagaaattcccat 8401412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 18772156 - 18772266
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaa-taatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccg 99  Q
    ||||||| ||||||||| | ||| || |||||||| | || ||||||||| | | || | ||||| |||||||||||||| | | |||| | ||||||||    
T  18772156 taaatattaacaaatagttatttctttcataaaaaatgatcgttaatttataaaattatgaagtaggagtaccgatacacttcactttgtgagtgtaccg 18772255  T
Q  100 tagaagttccc 110  Q
    |||||||||||    
T  18772256 tagaagttccc 18772266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 112
Target Start/End: Original strand, 1705914 - 1706014
Alignment:
Q  12 aaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcg-ggtgtaccgtagaagttccc 110  Q
    ||||| ||||||||| ||||||| |||| ||||| ||| | || ||| ||| | |||||||| ||||||| |||||  | ||||||||||||||||||||    
T  1705914 aaataactctttatttcataaaa-taatcgttaaattataaatatttgaagcaggagtaccggtacacctcaatttatgaggtgtaccgtagaagttccc 1706012  T
Q  111 at 112  Q
    ||    
T  1706013 at 1706014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 66 - 110
Target Start/End: Original strand, 17545965 - 17546009
Alignment:
Q  66 gagtaccgatacaccttaatttgcgggtgtaccgtagaagttccc 110  Q
    |||||||  |||||||||||||||||||||||  |||||||||||    
T  17545965 gagtaccagtacaccttaatttgcgggtgtactatagaagttccc 17546009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 66 - 110
Target Start/End: Complemental strand, 32833818 - 32833774
Alignment:
Q  66 gagtaccgatacaccttaatttgcgggtgtaccgtagaagttccc 110  Q
    |||||||  |||||| |||||||||| ||||||||||||||||||    
T  32833818 gagtaccagtacaccgtaatttgcggatgtaccgtagaagttccc 32833774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 93; Significance: 3e-45; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 26011051 - 26010943
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||| ||||||||||||||||||||||||||    
T  26011051 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagttttttgaagtaggagtaccggtacaccttaatttgcgggtgtaccgt 26010952  T
Q  101 agaagttcc 109  Q
    |||||||||    
T  26010951 agaagttcc 26010943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 33098814 - 33098706
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgt 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||    
T  33098814 taaatatcaacaaatagttctttattccataaaaataatagttaatttaaagatttttaaagtatgaatactgatacaccttaatttgtgggtgtaccgt 33098715  T
Q  101 agaagttcc 109  Q
    |||||||||    
T  33098714 agaagttcc 33098706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 51977967 - 51977859
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgt 100  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||    
T  51977967 taaacatcaacaaataactctttattccataaaaataatagttaatttaaagatttttgaagtaggagtaccggtacaccttaatttgcgggtgtaccgt 51977868  T
Q  101 agaagttcc 109  Q
    |||||||||    
T  51977867 agaagttcc 51977859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 33909987 - 33910098
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgt 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||||||| |||||||||||||| |||||||||||    
T  33909987 taaatatcaacaaatagctctttattccataaaaacaatagttaatttaaagatttttgaagtaggagtaccggtacaccttaatttgtgggtgtaccgt 33910086  T
Q  101 agaagttcccat 112  Q
    |||| |||||||    
T  33910087 agaaattcccat 33910098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 35910460 - 35910570
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgt 100  Q
    |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||| ||||||||||||    
T  35910460 taaatatcaacaaataactctttattctataaaaataatagttaatttaaagatttttgaagtaggagtaccgatacactttaatttacgggtgtaccgt 35910559  T
Q  101 agaagttccca 111  Q
    |||||||||||    
T  35910560 agaagttccca 35910570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 10178981 - 10178876
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgt 100  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  |||||||||    
T  10178981 taaatatcaacaaatacctctttattccataaaaataatagttaatttaaagatttttaaagtaggagtaccgatacaccttaatttgcaagtgtaccgt 10178882  T
Q  101 agaagt 106  Q
    | ||||    
T  10178881 ataagt 10178876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 2 - 97
Target Start/End: Complemental strand, 42316943 - 42316848
Alignment:
Q  2 aaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtac 97  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| ||||| |||||||| |||||||||||||||||||||||    
T  42316943 aaatatcaacaaatagcactttattccataaaaataatagttattttaaagatttttgaagtaggagtaccggtacaccttaatttgcgggtgtac 42316848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 632757 - 632647
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgt 100  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||  ||||| |||||  |||| || | ||||||||||||||||||| ||||    
T  632757 taaatatcaacaaataactctttattccataaaaataatagttaatttaaaattttttgaagtagaagtatcggttcaccttaatttgcgggtgtgccgt 632658  T
Q  101 agaagttccca 111  Q
    |||||||||||    
T  632657 agaagttccca 632647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 2 - 108
Target Start/End: Original strand, 2247343 - 2247449
Alignment:
Q  2 aaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgta 101  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||| || |||||||||||||   ||||||| |||||||||||||| ||||||||||||    
T  2247343 aaatatcaacaaatagctctttatttcataaaaatgatagttaatatatagatttttaaagttaaagtaccggtacaccttaatttgtgggtgtaccgta 2247442  T
Q  102 gaagttc 108  Q
    |||||||    
T  2247443 gaagttc 2247449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 2620971 - 2621085
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatga-----gtaccgatacaccttaatttgcgggtgt 95  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||||||||  ||||||||||  ||     |||||||||||||||||||||| |||||    
T  2620971 taaatatcaacaaatagttctttattccataaaaataattgttaatttaaatttttttaaagtgggagtaccgtaccgatacaccttaatttgcaggtgt 2621070  T
Q  96 accgtagaagttccc 110  Q
    |||||||||||||||    
T  2621071 accgtagaagttccc 2621085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 50239386 - 50239277
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgt 100  Q
    |||||||||| |||||  | |||||| ||||||||| |||||||||||| | |||||| ||||| |||||||| ||||||||||||||||||||||||||    
T  50239386 taaatatcaataaatatttttttatttcataaaaatgatagttaatttataaatttttgaagtaagagtaccggtacaccttaatttgcgggtgtaccgt 50239287  T
Q  101 agaagttccc 110  Q
    ||||||||||    
T  50239286 agaagttccc 50239277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 36274826 - 36274754
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccg 73  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  36274826 taaatatcaacaaatagctctttattccataaaactaatagttaatttaaagattttttaagtatgagtaccg 36274754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 28791476 - 28791390
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaattt 87  Q
    |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||| ||||| ||||| || |||||||    
T  28791476 taaatatcaacaaataactctttattctataaaaataatagttaatttaaagatttttgaagtaggagtatcgatatactttaattt 28791390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 23304705 - 23304800
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtac 97  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||||| | |||||| ||||| |||||||| |||| |||||||| |||||||||    
T  23304705 taaatatcaacaaatagct-tttatttcataaaaataatagttaatttataaatttttgaagtaagagtaccggtacatcttaatttacgggtgtac 23304800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 5 - 112
Target Start/End: Original strand, 7122256 - 7122363
Alignment:
Q  5 tatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgtagaa 104  Q
    |||||||||||| || |||||| ||||||||| |||||||||||| | |||||| ||||| |||||||| ||||| |||| ||| |||||||| ||||||    
T  7122256 tatcaacaaataactttttatttcataaaaatgatagttaatttataaatttttgaagtaagagtaccggtacactttaaattgtgggtgtactgtagaa 7122355  T
Q  105 gttcccat 112  Q
    ||||||||    
T  7122356 gttcccat 7122363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 48616557 - 48616495
Alignment:
Q  2 aaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagta 64  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  48616557 aaatatcaacaaatagctctttattccataaaaataataattaatttaaagatttttgaagta 48616495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 110
Target Start/End: Original strand, 51184339 - 51184445
Alignment:
Q  4 atatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgtaga 103  Q
    ||||||||||||| || |||||| ||||||||| |||||||||||| | |||||| ||||| ||||||||  ||||||||| ||| ||||||||| ||||    
T  51184339 atatcaacaaataactttttatttcataaaaatgatagttaatttataaatttttgaagtaagagtaccggcacaccttaaattgtgggtgtaccataga 51184438  T
Q  104 agttccc 110  Q
    |||||||    
T  51184439 agttccc 51184445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 27353144 - 27353215
Alignment:
Q  2 aaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccg 73  Q
    ||||||||| |||||||||||||||  ||||||||||||||||||||| |||||||||||||| ||||||||    
T  27353144 aaatatcaataaatagctctttattttataaaaataatagttaatttatagatttttaaagtaagagtaccg 27353215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 52261110 - 52261181
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtacc 72  Q
    |||||||||||||||| ||||||| || || ||||||||||||||||||||||||||| ||| |||||||||    
T  52261110 taaatatcaacaaataactctttaatctattaaaataatagttaatttaaagatttttgaagcatgagtacc 52261181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 2 - 110
Target Start/End: Complemental strand, 11778744 - 11778640
Alignment:
Q  2 aaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgta 101  Q
    |||||||||| |||| || |||||| ||||||||| |||||||||||| | |||||| ||||| ||||| ||||||||||||| ||    ||||||||||    
T  11778744 aaatatcaacgaataactttttatttcataaaaatgatagttaatttataaatttttgaagtaagagtatcgatacaccttaaatt----gtgtaccgta 11778649  T
Q  102 gaagttccc 110  Q
     ||||||||    
T  11778648 aaagttccc 11778640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 47718946 - 47718868
Alignment:
Q  9 aacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaattt 87  Q
    |||||||||||||||||| |||||| || ||| |||||||| ||||||||||| || |||||||  |||||||||||||    
T  47718946 aacaaatagctctttatttcataaagatgataattaatttatagatttttaaaataagagtaccagtacaccttaattt 47718868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 66 - 110
Target Start/End: Original strand, 23061364 - 23061408
Alignment:
Q  66 gagtaccgatacaccttaatttgcgggtgtaccgtagaagttccc 110  Q
    |||||||| ||||||||||||||||||||||||||||||||||||    
T  23061364 gagtaccggtacaccttaatttgcgggtgtaccgtagaagttccc 23061408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 66 - 111
Target Start/End: Original strand, 37499104 - 37499149
Alignment:
Q  66 gagtaccgatacaccttaatttgcgggtgtaccgtagaagttccca 111  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||    
T  37499104 gagtaccggtacaccttaatttgcgggtgtaccatagaagttccca 37499149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 70 - 110
Target Start/End: Original strand, 23057067 - 23057107
Alignment:
Q  70 accgatacaccttaatttgcgggtgtaccgtagaagttccc 110  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  23057067 accggtacaccttaatttgcgggtgtaccgtagaagttccc 23057107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 9176807 - 9176724
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaa 84  Q
    |||||| | |||||||||||||||||   ||||||| |||||||||||| | ||||||||| || ||||||| || ||||||||    
T  9176807 taaatagccacaaatagctctttattttgtaaaaatgatagttaatttataaatttttaaaataagagtaccaatccaccttaa 9176724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 112
Target Start/End: Complemental strand, 51610636 - 51610534
Alignment:
Q  10 acaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgtagaagttcc 109  Q
    ||||||| || |||||| ||||||| | || |||| |||| | |||| | ||| | |||||||||||||||| ||||| ||  |||||||||||||||||    
T  51610636 acaaataactatttatttcataaaattgattgttagtttataaatttatgaagcaagagtaccgatacacctcaatttacgaatgtaccgtagaagttcc 51610537  T
Q  110 cat 112  Q
    |||    
T  51610536 cat 51610534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 111
Target Start/End: Original strand, 51369680 - 51369725
Alignment:
Q  66 gagtaccgatacaccttaatttgcgggtgtaccgtagaagttccca 111  Q
    |||||||| ||||||||||||||| ||||||||||| |||||||||    
T  51369680 gagtaccggtacaccttaatttgcaggtgtaccgtaaaagttccca 51369725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 110
Target Start/End: Complemental strand, 921886 - 921842
Alignment:
Q  66 gagtaccgatacaccttaatttgcgggtgtaccgtagaagttccc 110  Q
    |||||||| ||||||||||||||| |||||||| |||||||||||    
T  921886 gagtaccggtacaccttaatttgcaggtgtaccatagaagttccc 921842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 110
Target Start/End: Complemental strand, 5956570 - 5956526
Alignment:
Q  66 gagtaccgatacaccttaatttgcgggtgtaccgtagaagttccc 110  Q
    |||||||| |||| ||||||||| |||||||||||||||||||||    
T  5956570 gagtaccggtacagcttaatttgtgggtgtaccgtagaagttccc 5956526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 110
Target Start/End: Complemental strand, 6520030 - 6519987
Alignment:
Q  66 gagtaccgatacaccttaatttgcgggtgtaccgtagaagttccc 110  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||    
T  6520030 gagtaccggtacaccttaatttgc-ggtgtaccgtagaagttccc 6519987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 18992647 - 18992743
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtac 97  Q
    |||||| || |||||| ||| |||||  |||||||| |||||||||||| | ||||||||| || || |||  ||||||||||| ||||| ||||||    
T  18992647 taaataccagcaaataactccttattttataaaaatgatagttaatttataaatttttaaaataagaatactaatacaccttaacttgcgagtgtac 18992743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 110
Target Start/End: Original strand, 35305514 - 35305558
Alignment:
Q  66 gagtaccgatacaccttaatttgcgggtgtaccgtagaagttccc 110  Q
    |||||||| ||||||||||||| || |||||||||||||||||||    
T  35305514 gagtaccggtacaccttaatttacgagtgtaccgtagaagttccc 35305558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 110
Target Start/End: Original strand, 51985297 - 51985341
Alignment:
Q  66 gagtaccgatacaccttaatttgcgggtgtaccgtagaagttccc 110  Q
    |||||||| |||||| |||||||| ||||||||||||||||||||    
T  51985297 gagtaccggtacaccgtaatttgcaggtgtaccgtagaagttccc 51985341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 66 - 109
Target Start/End: Complemental strand, 8461571 - 8461528
Alignment:
Q  66 gagtaccgatacaccttaatttgcgggtgtaccgtagaagttcc 109  Q
    |||||||| |||||| ||||||||||||||||| ||||||||||    
T  8461571 gagtaccggtacaccgtaatttgcgggtgtaccatagaagttcc 8461528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 66 - 101
Target Start/End: Original strand, 28494132 - 28494167
Alignment:
Q  66 gagtaccgatacaccttaatttgcgggtgtaccgta 101  Q
    |||||||| |||||||||||||||||||||||||||    
T  28494132 gagtaccggtacaccttaatttgcgggtgtaccgta 28494167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 30547907 - 30548014
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgt 100  Q
    ||||| || ||||||| || |||||| ||||||| | || |||| |||| |||||| | ||| | |||||||  ||||||| ||||| || |||||||||    
T  30547907 taaatgtcgacaaataactatttatttcataaaattgatcgttagtttatagatttatgaagcaagagtacctgtacacctcaatttacgagtgtaccgt 30548006  T
Q  101 agaagttc 108  Q
    ||||||||    
T  30548007 agaagttc 30548014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 112
Target Start/End: Original strand, 43146732 - 43146829
Alignment:
Q  13 aatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgtagaagttcccat 112  Q
    |||| ||||||||| ||||||| |||| ||||| ||| | |||||| ||||| |||||||  ||||||| |||||| || |||||||||||||| |||||    
T  43146732 aataactctttatttcataaaa-taatcgttaaattataaatttttgaagtaggagtaccagtacacctcaatttgagg-tgtaccgtagaagtccccat 43146829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 110
Target Start/End: Original strand, 24511883 - 24511985
Alignment:
Q  8 caacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgtagaagtt 107  Q
    ||||||||| || |||||| ||||||| | || |||| |||| | |||| | ||| | |||||||| ||||||| ||||| || ||||||||||||| ||    
T  24511883 caacaaataactatttatttcataaaattgatcgttagtttataaatttatgaagcaagagtaccggtacacctcaatttacgagtgtaccgtagaaatt 24511982  T
Q  108 ccc 110  Q
    |||    
T  24511983 ccc 24511985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 106
Target Start/End: Complemental strand, 26423938 - 26423845
Alignment:
Q  13 aatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcg-ggtgtaccgtagaagt 106  Q
    |||| ||||||||| ||||||| ||||  |||| ||| | |||||| ||||| |||||||| |||||||||||||  | ||||||||||||||||    
T  26423938 aataactctttatttcataaaa-taattattaaattataaatttttgaagtaggagtaccggtacaccttaatttatgaggtgtaccgtagaagt 26423845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 111
Target Start/End: Complemental strand, 32912311 - 32912210
Alignment:
Q  10 acaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcg-ggtgtaccgtagaagttc 108  Q
    |||||||||| |||||| | ||||| | || ||||||||| | |||| | ||||  |||||||||||||||| |||||| | ||||||| ||||||||||    
T  32912311 acaaatagctatttatttcttaaaa-tgatcgttaatttataaatttatgaagtgagagtaccgatacacctcaatttgtgaggtgtactgtagaagttc 32912213  T
Q  109 cca 111  Q
    |||    
T  32912212 cca 32912210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 41541587 - 41541501
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaattt 87  Q
    |||||||  ||||||||||||||||| ||||||||| || ||||||| | | |||| | ||| | |||||||| ||||||| |||||    
T  41541587 taaatattgacaaatagctctttatttcataaaaatgatcgttaattcataaatttatgaagcaagagtaccggtacacctcaattt 41541501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 112
Target Start/End: Original strand, 46641879 - 46641925
Alignment:
Q  66 gagtaccgatacaccttaatttgcgggtgtaccgtagaagttcccat 112  Q
    |||||||| ||||||| | |||||| |||||||||||||||||||||    
T  46641879 gagtaccggtacacctcattttgcgagtgtaccgtagaagttcccat 46641925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 110
Target Start/End: Original strand, 7435875 - 7435920
Alignment:
Q  66 gagtaccgatacaccttaatttgcg-ggtgtaccgtagaagttccc 110  Q
    |||||||||||||||| |||||| | ||||||||||||||||||||    
T  7435875 gagtaccgatacacctcaatttgtgaggtgtaccgtagaagttccc 7435920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 104
Target Start/End: Complemental strand, 11444374 - 11444277
Alignment:
Q  7 tcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgtagaa 104  Q
    |||||||||| || |||||| ||||||||||||  |||| |||  ||||| | || || | |||||| |||| ||||||||  |||||||||||||||    
T  11444374 tcaacaaatatctatttattacataaaaataatcattaacttattgatttatgaaataggtgtaccggtacatcttaatttaagggtgtaccgtagaa 11444277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 9587940 - 9588056
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaa-ataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccg 99  Q
    ||||||| ||||||||||| |||||| ||||||| |||||  |||||||| | | || | ||| | |||||||| || |||| | |||  | ||||||||    
T  9587940 taaatattaacaaatagctatttatttcataaaagataatcattaatttataaaattatgaagcaggagtaccggtatacctcactttatgagtgtaccg 9588039  T
Q  100 tagaagttcccatctaa 116  Q
    ||||||||||| |||||    
T  9588040 tagaagttcccttctaa 9588056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 20487678 - 20487642
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaata 37  Q
    |||||||||||||||| ||||||||| ||||||||||    
T  20487678 taaatatcaacaaataactctttatttcataaaaata 20487642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 69 - 113
Target Start/End: Complemental strand, 32144710 - 32144666
Alignment:
Q  69 taccgatacaccttaatttgcgggtgtaccgtagaagttcccatc 113  Q
    |||||||||||||||||||  | ||||||| ||||||||||||||    
T  32144710 taccgatacaccttaatttatgagtgtaccatagaagttcccatc 32144666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 34038271 - 34038163
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaa-taatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccg 99  Q
    ||||||| |||||||| || |||||| |||||||| | || ||||||||| | | || | ||| | |||||||| ||||||| | |||| | ||||||||    
T  34038271 taaatattaacaaataactatttatttcataaaaaatgatcgttaatttataaaattatgaagcaggagtaccggtacacctcactttgtgagtgtaccg 34038172  T
Q  100 tagaagttc 108  Q
    |||||||||    
T  34038171 tagaagttc 34038163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 92; Significance: 1e-44; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 20438925 - 20438822
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||    
T  20438925 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttgaagtaggagtaccggtacaccttaatttgcgggtgtaccgt 20438826  T
Q  101 agaa 104  Q
    ||||    
T  20438825 agaa 20438822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 18990385 - 18990494
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgt 100  Q
    ||||||||||||||||||||||||||| |||||| || |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  18990385 taaatatcaacaaatagctctttattctataaaagtactagttaatttaaagatttttaaagtaggagtaccggtacaccttaatttgcgggtgtaccgt 18990484  T
Q  101 agaagttccc 110  Q
    ||||||||||    
T  18990485 agaagttccc 18990494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 43750372 - 43750481
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgt 100  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||| ||||| ||||    
T  43750372 taaatatcaataaatagctctttattccataaaaataatagttaatttaaagatttttgaagtaggagtaccggtacaccttaatttgcaggtgtcccgt 43750471  T
Q  101 agaagttccc 110  Q
    ||||||||||    
T  43750472 agaagttccc 43750481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 48946366 - 48946477
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgt 100  Q
    |||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||||| | ||||||||||| ||||||||| |||||||||||    
T  48946366 taaatatcaaaaaatagctctttatttcataaaaataataattaatttaaagatttttaaagtaggggtaccgatacatcttaatttgagggtgtaccgt 48946465  T
Q  101 agaagttcccat 112  Q
    ||||||| ||||    
T  48946466 agaagtttccat 48946477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 30317485 - 30317595
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaa-gatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccg 99  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||   ||||||||||| |||||||||||||||||||||||| |||||||||    
T  30317485 taaatatcaacaaatagctctttattccataaaaataattgttaatttaaattttttttaaagtaggagtaccgatacaccttaatttgcaggtgtaccg 30317584  T
Q  100 tagaagttccc 110  Q
    ||||| |||||    
T  30317585 tagaaattccc 30317595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 34118767 - 34118876
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgt 100  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||| || || |||||||  ||||||||||||||||||||||||||    
T  34118767 taaatatcaacaaatagcactttattccataaaaataatagttaatttaaatttttttgaaataagagtaccagtacaccttaatttgcgggtgtaccgt 34118866  T
Q  101 agaagttccc 110  Q
    ||||||||||    
T  34118867 agaagttccc 34118876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 30936203 - 30936094
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgt 100  Q
    ||||||||||||||||||| |||||| ||||||| | |||||||||||| | |||||| ||||| |||||||| ||||||||||||||||||||||||||    
T  30936203 taaatatcaacaaatagctttttatttcataaaattgatagttaatttataaatttttgaagtaagagtaccggtacaccttaatttgcgggtgtaccgt 30936104  T
Q  101 agaagttccc 110  Q
    ||||||||||    
T  30936103 agaagttccc 30936094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 45857584 - 45857475
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgt 100  Q
    ||||||||||||||||||| |||||| ||||||| |||||||||||||| | |||||| ||||| |||||||| ||||||||||||||||||||||||||    
T  45857584 taaatatcaacaaatagctttttatttcataaaagtaatagttaatttataaatttttgaagtaagagtaccggtacaccttaatttgcgggtgtaccgt 45857485  T
Q  101 agaagttccc 110  Q
    | ||||||||    
T  45857484 aaaagttccc 45857475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 8770478 - 8770368
Alignment:
Q  2 aaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgta 101  Q
    ||||||||||||| | ||||||||| ||||||||| |||||||||||| |||||||| ||| | ||||| || |||||||||||||||||||||||||||    
T  8770478 aaatatcaacaaacaactctttatttcataaaaatgatagttaatttatagatttttgaagcaagagtatcggtacaccttaatttgcgggtgtaccgta 8770379  T
Q  102 gaagttcccat 112  Q
     ||| ||||||    
T  8770378 taagatcccat 8770368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 2 - 111
Target Start/End: Complemental strand, 44963931 - 44963822
Alignment:
Q  2 aaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgta 101  Q
    ||||||||||||||| || |||||| ||||||||| |||||||||||| | |||||| ||||| |||||||| |||||||||| ||| ||||||||| ||    
T  44963931 aaatatcaacaaataactttttatttcataaaaatgatagttaatttataaatttttgaagtaagagtaccggtacaccttaaattgtgggtgtaccata 44963832  T
Q  102 gaagttccca 111  Q
    ||||||||||    
T  44963831 gaagttccca 44963822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 46836692 - 46836584
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgt 100  Q
    |||||||||| ||||||| |||||||| |||||||||||||||||||||||  ||||| |||||  |||| ||||||| |||||||||| |||||| |||    
T  46836692 taaatatcaataaatagcactttattctataaaaataatagttaatttaaaattttttgaagtagaagtatcgatacatcttaatttgcaggtgtatcgt 46836593  T
Q  101 agaagttcc 109  Q
    |||||||||    
T  46836592 agaagttcc 46836584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 2 - 108
Target Start/End: Original strand, 31482670 - 31482777
Alignment:
Q  2 aaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaa-tttgcgggtgtaccgt 100  Q
    ||||||||  ||||||||||||||| |||||||||||||||||||||| ||||||||||| ||  ||| |||||||||||||| ||| | |||| |||||    
T  31482670 aaatatcatgaaatagctctttatttcataaaaataatagttaatttatagatttttaaaataaaagtgccgatacaccttaattttactggtgcaccgt 31482769  T
Q  101 agaagttc 108  Q
    ||||||||    
T  31482770 agaagttc 31482777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 11486293 - 11486403
Alignment:
Q  2 aaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgta 101  Q
    ||||||||| ||||||||||||||| ||||||||  |||||||||||| |||||||| ||||| |||||||| |||||||||||||   |||||| ||||    
T  11486293 aaatatcaataaatagctctttatttcataaaaaagatagttaatttatagatttttgaagtaagagtaccggtacaccttaatttataggtgtatcgta 11486392  T
Q  102 gaagttcccat 112  Q
    ||  |||||||    
T  11486393 gatattcccat 11486403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 12 - 110
Target Start/End: Original strand, 43069416 - 43069514
Alignment:
Q  12 aaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgtagaagttccc 110  Q
    ||||||||||| ||| ||||||||| |||||||||| | |||||||| ||||| ||||||||||||| ||||| || | ||||||||||||||||||||    
T  43069416 aaatagctcttaatttcataaaaatgatagttaattaatagatttttgaagtaagagtaccgatacatcttaacttacaggtgtaccgtagaagttccc 43069514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 42975192 - 42975301
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgt 100  Q
    ||||||||||||||||| | |||||| |||||||||||||||||||||| | |||||| |||||  | || || ||||||||||||| ||| |||||  |    
T  42975192 taaatatcaacaaatagttttttatttcataaaaataatagttaatttataaatttttgaagtaaaaatatcggtacaccttaatttacggatgtacaat 42975291  T
Q  101 agaagttccc 110  Q
    ||||||||||    
T  42975292 agaagttccc 42975301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 41809496 - 41809577
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacacctt 82  Q
    ||||||||||||||||  |||||||| ||||||| | |||||||||||| |||||||| |||||| ||||| ||||||||||    
T  41809496 taaatatcaacaaataattctttatttcataaaattgatagttaatttatagatttttgaagtatcagtactgatacacctt 41809577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 66 - 112
Target Start/End: Original strand, 42711291 - 42711337
Alignment:
Q  66 gagtaccgatacaccttaatttgcgggtgtaccgtagaagttcccat 112  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||||    
T  42711291 gagtaccggtacaccttaatttgcggatgtaccgtagaagttcccat 42711337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 66 - 111
Target Start/End: Original strand, 27956647 - 27956692
Alignment:
Q  66 gagtaccgatacaccttaatttgcgggtgtaccgtagaagttccca 111  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||    
T  27956647 gagtaccggtacaccttaatttgcgggtgtaccatagaagttccca 27956692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 66 - 110
Target Start/End: Complemental strand, 41913140 - 41913096
Alignment:
Q  66 gagtaccgatacaccttaatttgcgggtgtaccgtagaagttccc 110  Q
    |||||||| |||||||||||||||||||||||| |||||||||||    
T  41913140 gagtaccggtacaccttaatttgcgggtgtaccatagaagttccc 41913096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 113
Target Start/End: Complemental strand, 41663964 - 41663853
Alignment:
Q  2 aaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgta 101  Q
    |||||||| |||||||||||||||| ||||||||  || ||| ||||  |||  ||| ||| |  | |||| |||||| |||||||||| ||||||||||    
T  41663964 aaatatcatcaaatagctctttatttcataaaaacgatggttgatttgtagaaatttgaagcaaaaataccaatacactttaatttgcgagtgtaccgta 41663865  T
Q  102 gaagttcccatc 113  Q
    |||||| |||||    
T  41663864 gaagtttccatc 41663853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 104
Target Start/End: Original strand, 24203170 - 24203267
Alignment:
Q  7 tcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgtagaa 104  Q
    |||||||||| ||||||||| ||||||||||||  ||||||||  ||||| | || || | |||||  |||| ||||||||  |||||||||||||||    
T  24203170 tcaacaaatatctctttattacataaaaataatcattaatttattgatttatgaaataggtgtaccagtacatcttaatttaagggtgtaccgtagaa 24203267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 110
Target Start/End: Original strand, 28327433 - 28327473
Alignment:
Q  70 accgatacaccttaatttgcgggtgtaccgtagaagttccc 110  Q
    |||| |||| |||||||||||||||||||||||||||||||    
T  28327433 accggtacagcttaatttgcgggtgtaccgtagaagttccc 28327473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 110
Target Start/End: Original strand, 31743610 - 31743708
Alignment:
Q  12 aaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcg-ggtgtaccgtagaagttccc 110  Q
    ||||| ||||||||| ||||||| |||| ||||| ||| | |||||| ||| | |||||||| ||||||  |||||| | ||||||||||||||||||||    
T  31743610 aaataactctttatttcataaaa-taatcgttaaattataaatttttgaagcaggagtaccggtacaccacaatttgtgaggtgtaccgtagaagttccc 31743708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 37001091 - 37001005
Alignment:
Q  18 ctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgtagaa 104  Q
    ||||||||| ||||||||| || |||||||||  || || | || || | ||||||||||||||||||||   ||||||||||||||    
T  37001091 ctctttattacataaaaatgattgttaatttattgaattatgaaataggtgtaccgatacaccttaatttaaaggtgtaccgtagaa 37001005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 108
Target Start/End: Original strand, 45461689 - 45461731
Alignment:
Q  66 gagtaccgatacaccttaatttgcgggtgtaccgtagaagttc 108  Q
    |||||||| |||||| |||||||| ||||||||||||||||||    
T  45461689 gagtaccggtacaccgtaatttgcaggtgtaccgtagaagttc 45461731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 43631164 - 43631055
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgt 100  Q
    ||||| || ||||||| || |||||| ||||||| | || |||| |||| |||||| | ||| | |||||||| ||||||| ||| | || ||||||| |    
T  43631164 taaatgtcgacaaataactatttatttcataaaattgatcgttagtttatagatttatgaagcaagagtaccggtacacctcaatctacgagtgtaccat 43631065  T
Q  101 agaagttccc 110  Q
    ||||||||||    
T  43631064 agaagttccc 43631055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 111
Target Start/End: Original strand, 5215333 - 5215432
Alignment:
Q  12 aaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgg-gtgtaccgtagaagttccc 110  Q
    ||||| ||||||||| ||||||| |||| ||||| ||  | || ||||||| | |||||||| ||||||| |||||| |  |||||||||||||||||||    
T  5215333 aaataactctttatttcataaaa-taatcgttaaattgtaaatatttaaagcaggagtaccggtacacctcaatttgtgatgtgtaccgtagaagttccc 5215431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 104
Target Start/End: Original strand, 29273346 - 29273382
Alignment:
Q  68 gtaccgatacaccttaatttgcgggtgtaccgtagaa 104  Q
    ||||||||||||||||||||  |||||||||||||||    
T  29273346 gtaccgatacaccttaatttaagggtgtaccgtagaa 29273382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 91; Significance: 5e-44; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 13795381 - 13795272
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||| ||||||||||    
T  13795381 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtaggagtatcggtacaccttaatttgc-ggtgtaccgt 13795283  T
Q  101 agaagttccca 111  Q
    |||||||||||    
T  13795282 agaagttccca 13795272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 2318535 - 2318431
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaa-taatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccg 99  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||    
T  2318535 taaatatcaacaaatagctctttattccataaaaaataataattaatttaaagatttttgaagtaggagtaccggtacaccttaatttgcgggtgtaccg 2318436  T
Q  100 tagaa 104  Q
    |||||    
T  2318435 tagaa 2318431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 21051430 - 21051327
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||| || ||||||||||||| ||||||||||||    
T  21051430 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaaatagaagtatcggtacaccttaatttacgggtgtaccgt 21051331  T
Q  101 agaa 104  Q
    ||||    
T  21051330 agaa 21051327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 28332419 - 28332528
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgt 100  Q
    ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||| |||||||||||||||  |||||||||    
T  28332419 taaatataaaaaaatagctctttattccataaaaataatagttaatttaaagatttttgaaataggagtaccggtacaccttaatttgcaagtgtaccgt 28332518  T
Q  101 agaagttccc 110  Q
    ||||||||||    
T  28332519 agaagttccc 28332528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 4 - 110
Target Start/End: Complemental strand, 12362463 - 12362357
Alignment:
Q  4 atatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgtaga 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  ||  ||||||| ||||||||||||||||| |||||| ||||    
T  12362463 atatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttgagatagaagtaccggtacaccttaatttgcggatgtaccttaga 12362364  T
Q  104 agttccc 110  Q
    |||||||    
T  12362363 agttccc 12362357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 4 - 110
Target Start/End: Original strand, 14967531 - 14967637
Alignment:
Q  4 atatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgtaga 103  Q
    |||||||||||||||| |||||| ||||||||| |||||||||||| | |||||| ||||| |||||||||||||||||||||||| |||||||||||||    
T  14967531 atatcaacaaatagctttttatttcataaaaatgatagttaatttataaatttttgaagtaagagtaccgatacaccttaatttgcaggtgtaccgtaga 14967630  T
Q  104 agttccc 110  Q
    |||||||    
T  14967631 agttccc 14967637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 4 - 109
Target Start/End: Complemental strand, 3425195 - 3425090
Alignment:
Q  4 atatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgtaga 103  Q
    ||||||||||||||  ||||||| || |||||||||||||||||||||||||||| ||||| |||||||| ||||| |||||||||||||||||||||||    
T  3425195 atatcaacaaatagtactttatttcaaaaaaataatagttaatttaaagatttttgaagtaggagtaccggtacactttaatttgcgggtgtaccgtaga 3425096  T
Q  104 agttcc 109  Q
    ||||||    
T  3425095 agttcc 3425090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 13091210 - 13091319
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgt 100  Q
    ||||||||||||||||||| |||||| ||||||||| |||||||||||| | |||||| ||||| |||||||| ||||||||||||| ||||||||||||    
T  13091210 taaatatcaacaaatagctttttatttcataaaaatgatagttaatttataaatttttgaagtaagagtaccggtacaccttaatttacgggtgtaccgt 13091309  T
Q  101 agaagttccc 110  Q
    ||||||||||    
T  13091310 agaagttccc 13091319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 9589505 - 9589610
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgt 100  Q
    ||||||||||||||||||| |||||| ||||||||| |||||||||||| | |||||| ||||| ||||||||||||||||||||||| || ||||||||    
T  9589505 taaatatcaacaaatagctttttatttcataaaaatgatagttaatttataaatttttgaagtaagagtaccgatacaccttaatttgtggatgtaccgt 9589604  T
Q  101 agaagt 106  Q
    ||||||    
T  9589605 agaagt 9589610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 27118012 - 27118123
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgt 100  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||||||||  ||||| ||||| || ||||| ||||||||||||||| ||| |||  |    
T  27118012 taaatatcaataaataactctttattccataaaaataatagttaatttaaatttttttgaagtaggaataccggtacaccttaatttgcaggtatacaat 27118111  T
Q  101 agaagttcccat 112  Q
    |||| |||||||    
T  27118112 agaaattcccat 27118123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 104
Target Start/End: Original strand, 41802405 - 41802507
Alignment:
Q  2 aaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgta 101  Q
    ||||||||||||||||||||||||| ||||||||| |||||||||||| | ||||||||| || |||||||  |||||||||||||  || |||||||||    
T  41802405 aaatatcaacaaatagctctttatttcataaaaatgatagttaatttataaatttttaaaataagagtaccagtacaccttaatttatggatgtaccgta 41802504  T
Q  102 gaa 104  Q
    |||    
T  41802505 gaa 41802507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 29744199 - 29744307
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgt 100  Q
    |||||||||| ||||||||||||||| ||||||||| |||||||||||| | |||||| ||| |  ||||||| ||||| |||||||| | |||||||||    
T  29744199 taaatatcaataaatagctctttatttcataaaaatgatagttaatttataaatttttgaagcaaaagtaccggtacactttaatttgtgagtgtaccgt 29744298  T
Q  101 agaagttcc 109  Q
    | |||||||    
T  29744299 ataagttcc 29744307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 35817458 - 35817373
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatt 86  Q
    ||||||||||||||||||  |||||| ||||||||| |||||||||| | |||||||||||| |  ||||||||||||||||||||    
T  35817458 taaatatcaacaaatagcattttatttcataaaaattatagttaattgatagatttttaaagcaaaagtaccgatacaccttaatt 35817373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 37431459 - 37431409
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaa 51  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  37431459 taaatatcaacaaatagctctttatttcataaaaataatagttaatttaaa 37431409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 5204726 - 5204617
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcg-ggtgtaccg 99  Q
    |||||||| | ||||| ||||||||| ||||||| |||| ||||| ||  | || ||||||| | |||||||||||||||| |||||| | |||||||||    
T  5204726 taaatatcgataaataactctttatttcataaaa-taatcgttaaattgtaaatatttaaagcaggagtaccgatacacctcaatttgtgaggtgtaccg 5204628  T
Q  100 tagaagttccc 110  Q
    |||||||||||    
T  5204627 tagaagttccc 5204617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 66 - 112
Target Start/End: Original strand, 13410904 - 13410950
Alignment:
Q  66 gagtaccgatacaccttaatttgcgggtgtaccgtagaagttcccat 112  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||||    
T  13410904 gagtaccggtacaccttaatttgcggatgtaccgtagaagttcccat 13410950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 66 - 111
Target Start/End: Original strand, 32467405 - 32467450
Alignment:
Q  66 gagtaccgatacaccttaatttgcgggtgtaccgtagaagttccca 111  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||    
T  32467405 gagtaccggtacaccgtaatttgcgggtgtaccgtagaagttccca 32467450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 35682391 - 35682478
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttg 88  Q
    |||||||||||| ||||||||||||| ||||||||| |||| |||||||  ||||||| ||| | |||||| | |||| | |||||||    
T  35682391 taaatatcaacatatagctctttatttcataaaaatgataggtaatttattgatttttgaagcaagagtactggtacatcctaatttg 35682478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 112
Target Start/End: Original strand, 34303010 - 34303056
Alignment:
Q  66 gagtaccgatacaccttaatttgcgggtgtaccgtagaagttcccat 112  Q
    |||||||| |||||| |||||||| ||||||||||||||||||||||    
T  34303010 gagtaccggtacaccgtaatttgcaggtgtaccgtagaagttcccat 34303056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 40756650 - 40756541
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcg-ggtgtaccg 99  Q
    |||||||| | ||||| ||||||||| ||||||| |||| ||||| ||  | || ||| ||| | |||||||||||||||| |||||| | |||||||||    
T  40756650 taaatatcgataaataactctttatttcataaaa-taatggttaaattgtaaatatttgaagcaggagtaccgatacacctcaatttgtgaggtgtaccg 40756552  T
Q  100 tagaagttccc 110  Q
    |||||||||||    
T  40756551 tagaagttccc 40756541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 42 - 110
Target Start/End: Complemental strand, 4039538 - 4039469
Alignment:
Q  42 ttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcg-ggtgtaccgtagaagttccc 110  Q
    |||||||| | |||| | ||||| |||||||| |||||||||||||| | ||||||||||||||||||||    
T  4039538 ttaatttataaatttatgaagtaagagtaccggtacaccttaatttgtgaggtgtaccgtagaagttccc 4039469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 110
Target Start/End: Original strand, 17069291 - 17069391
Alignment:
Q  10 acaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgtagaagttcc 109  Q
    ||||||| || |||||| ||||||| | || |||| |||| |||||| | ||| | |||||||| ||||||| ||||| || ||| ||||||||||||||    
T  17069291 acaaataactatttatttcataaaattgatcgttagtttatagatttatgaagcaggagtaccggtacacctcaatttacgagtgcaccgtagaagttcc 17069390  T
Q  110 c 110  Q
    |    
T  17069391 c 17069391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 111
Target Start/End: Original strand, 22780840 - 22780920
Alignment:
Q  31 aaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgtagaagttccca 111  Q
    |||||| |||||||||||| | |||||| ||  | |||| ||| |||| ||||||||||  ||||||||||||||||||||    
T  22780840 aaaaatgatagttaatttataaattttttaaacaagagtgccggtacatcttaatttgcaagtgtaccgtagaagttccca 22780920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 110
Target Start/End: Complemental strand, 43237399 - 43237355
Alignment:
Q  66 gagtaccgatacaccttaatttgcgggtgtaccgtagaagttccc 110  Q
    ||||||||||||||| |||||||| |||||||| |||||||||||    
T  43237399 gagtaccgatacaccgtaatttgcaggtgtaccatagaagttccc 43237355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 7 - 50
Target Start/End: Complemental strand, 33654932 - 33654889
Alignment:
Q  7 tcaacaaatagctctttattccataaaaataatagttaatttaa 50  Q
    |||||||||| ||||||||| |||||||||||| ||||||||||    
T  33654932 tcaacaaataactctttatttcataaaaataatcgttaatttaa 33654889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 1490796 - 1490710
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaattt 87  Q
    ||||| |||||||| | || |||||| ||||||| | ||| |||||||| |||||||| ||| | || || ||||||||||||||||    
T  1490796 taaatgtcaacaaaaaactttttatttcataaaagtgatatttaatttatagatttttgaagcaagaataacgatacaccttaattt 1490710  T

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Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 64 - 110
Target Start/End: Original strand, 2852058 - 2852104
Alignment:
Q  64 atgagtaccgatacaccttaatttgcgggtgtaccgtagaagttccc 110  Q
    |||||||||||||||||| | |||| | |||||||||||||||||||    
T  2852058 atgagtaccgatacacctcattttgtgagtgtaccgtagaagttccc 2852104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 111
Target Start/End: Original strand, 42917480 - 42917525
Alignment:
Q  66 gagtaccgatacaccttaatttgcgggtgtaccgtagaagttccca 111  Q
    |||||||| |||||||||||||| ||||||||| || |||||||||    
T  42917480 gagtaccggtacaccttaatttgtgggtgtaccataaaagttccca 42917525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 66 - 110
Target Start/End: Original strand, 32455656 - 32455700
Alignment:
Q  66 gagtaccgatacaccttaatttgcgggtgtaccgtagaagttccc 110  Q
    ||||||||||||||||||||||  | ||||||| |||||||||||    
T  32455656 gagtaccgatacaccttaatttatgagtgtaccatagaagttccc 32455700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0625 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0625
Description:

Target: scaffold0625; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 6375 - 6266
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgt 100  Q
    ||||||||||||||||||||||||||| |||||| || |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  6375 taaatatcaacaaatagctctttattctataaaagtactagttaatttaaagatttttaaagtaggagtaccggtacaccttaatttgcgggtgtaccgt 6276  T
Q  101 agaagttccc 110  Q
    ||||||||||    
T  6275 agaagttccc 6266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 89; Significance: 8e-43; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 37909655 - 37909763
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||||| |||||||| ||||||||||||||||||||||||||    
T  37909655 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaaattttttgaagtaggagtaccggtacaccttaatttgcgggtgtaccgt 37909754  T
Q  101 agaagttcc 109  Q
    |||||||||    
T  37909755 agaagttcc 37909763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 34438296 - 34438187
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||| ||||||||||||| |||||||||| |    
T  34438296 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttgaagtattagtgccggtacaccttaatttacgggtgtaccat 34438197  T
Q  101 agaagttccc 110  Q
    ||||||||||    
T  34438196 agaagttccc 34438187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 20212262 - 20212156
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||| ||| ||||||||| ||    
T  20212262 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttgaagtaggagtaccggtacaccttagtttacgggtgtacggt 20212163  T
Q  101 agaagtt 107  Q
    |||||||    
T  20212162 agaagtt 20212156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 6513371 - 6513262
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||| ||||||||||||| | | ||||||||    
T  6513371 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaatttttttaaagtaggagtaccggtacaccttaatttacagatgtaccgt 6513272  T
Q  101 agaagttccc 110  Q
    ||||||||||    
T  6513271 agaagttccc 6513262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 36489568 - 36489675
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgt 100  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||||||||||||||| || ||||||||| |||||||| |    
T  36489568 taaatatcaacaaatagctctttattccataaaaatagtaattaatttaaagatttttgaagtatgagtaccgatatactttaatttgcaggtgtaccat 36489667  T
Q  101 agaagttc 108  Q
    ||||||||    
T  36489668 agaagttc 36489675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 11598412 - 11598518
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgt 100  Q
    ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| || ||||||||||||||| ||||||||||    
T  11598412 taaatataaaaaaatagctctttattccataaaaataatagttaatttaaagatttttgaagtaggagtatcggtacaccttaatttgcaggtgtaccgt 11598511  T
Q  101 agaagtt 107  Q
    |||||||    
T  11598512 agaagtt 11598518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 43690131 - 43690021
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgt 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||| ||||  ||||||| ||||||||||||||||||||||| |||    
T  43690131 taaatatcaacaaatagctctttattccataaaaataattgttaatttaaatttttttgaagtgggagtaccaatacaccttaatttgcgggtgtatcgt 43690032  T
Q  101 agaagttccca 111  Q
    |||||||||||    
T  43690031 agaagttccca 43690021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 33413003 - 33413110
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgt 100  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||||| | |||||||||| |||||||| ||||||||||||| | ||||||||||    
T  33413003 taaatatcaacaaatagttctttattccataaaactaatagttaatttaaaaaattttaaagtaggagtaccggtacaccttaatttacaggtgtaccgt 33413102  T
Q  101 agaagttc 108  Q
    ||||||||    
T  33413103 agaagttc 33413110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 32499442 - 32499551
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgt 100  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||| | |||| |||||  ||||||| || ||||||||||| |||||||||||    
T  32499442 taaatatcaacaaatagctttttattccataaaaataataattaatttaaaaaattttgaagtagaagtaccggtataccttaatttgtgggtgtaccgt 32499541  T
Q  101 agaagttccc 110  Q
    ||||| ||||    
T  32499542 agaagatccc 32499551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 6438281 - 6438172
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgt 100  Q
    ||||||||||||||||||| |||||| ||||||||| |||||||||||| | |||||| || || ||||||||  |||||||||||| ||| | ||||||    
T  6438281 taaatatcaacaaatagctttttatttcataaaaattatagttaatttataaatttttgaattaagagtaccggcacaccttaatttacggatttaccgt 6438182  T
Q  101 agaagttccc 110  Q
    ||||||||||    
T  6438181 agaagttccc 6438172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 12547664 - 12547759
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgta 96  Q
    |||||||||| |||||||| |||||| |||||||||||||||||||||| | |||||| ||||| ||||||   ||||||||||||||||||||||    
T  12547664 taaatatcaataaatagctttttatttcataaaaataatagttaatttataaatttttgaagtaagagtactcgtacaccttaatttgcgggtgta 12547759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 40370768 - 40370855
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttg 88  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||||||||  ||||||||||| || |||| |||||| ||||||||    
T  40370768 taaatatcaacaaataactctttattccataaaaataataattaatttaaatttttttaaagtaggaataccaatacactttaatttg 40370855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 66 - 110
Target Start/End: Original strand, 34665932 - 34665976
Alignment:
Q  66 gagtaccgatacaccttaatttgcgggtgtaccgtagaagttccc 110  Q
    |||||||| ||||||||||||||||||||||||||||||||||||    
T  34665932 gagtaccggtacaccttaatttgcgggtgtaccgtagaagttccc 34665976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 66 - 110
Target Start/End: Original strand, 37083573 - 37083617
Alignment:
Q  66 gagtaccgatacaccttaatttgcgggtgtaccgtagaagttccc 110  Q
    |||||||||||||||||||||||||| ||||||||||||||||||    
T  37083573 gagtaccgatacaccttaatttgcggatgtaccgtagaagttccc 37083617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 66 - 110
Target Start/End: Complemental strand, 5389246 - 5389202
Alignment:
Q  66 gagtaccgatacaccttaatttgcgggtgtaccgtagaagttccc 110  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||    
T  5389246 gagtgccggtacaccttaatttgcgggtgtaccgtagaagttccc 5389202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 66 - 110
Target Start/End: Complemental strand, 14532868 - 14532824
Alignment:
Q  66 gagtaccgatacaccttaatttgcgggtgtaccgtagaagttccc 110  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||    
T  14532868 gagtatcgatacaccgtaatttgcgggtgtaccgtagaagttccc 14532824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 66 - 109
Target Start/End: Original strand, 1353868 - 1353911
Alignment:
Q  66 gagtaccgatacaccttaatttgcgggtgtaccgtagaagttcc 109  Q
    |||||| | |||||||||||||||||||||||||||||||||||    
T  1353868 gagtactggtacaccttaatttgcgggtgtaccgtagaagttcc 1353911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 112
Target Start/End: Complemental strand, 38073206 - 38073104
Alignment:
Q  10 acaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcg-ggtgtaccgtagaagttc 108  Q
    ||||||| || |||||| ||||||| | || ||||||||| | |||| | ||||| |||||||| ||||||| |||||| | ||||||||||||||||||    
T  38073206 acaaatatctatttatttcataaaa-tgatcgttaatttataaatttatgaagtaagagtaccggtacacctcaatttgtgaggtgtaccgtagaagttc 38073108  T
Q  109 ccat 112  Q
    ||||    
T  38073107 ccat 38073104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 108
Target Start/End: Original strand, 11227989 - 11228031
Alignment:
Q  66 gagtaccgatacaccttaatttgcgggtgtaccgtagaagttc 108  Q
    |||||| ||||||||||||||||| ||||||||||||||||||    
T  11227989 gagtactgatacaccttaatttgcaggtgtaccgtagaagttc 11228031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 109
Target Start/End: Original strand, 12002654 - 12002750
Alignment:
Q  13 aatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcg-ggtgtaccgtagaagttcc 109  Q
    |||| ||||||||| ||||||| | || ||||| ||| | ||||||||| ||  ||||||||||||||| |||||| | |||||||||||||||||||    
T  12002654 aataactctttatttcataaaa-tgatcgttaaattataaatttttaaaatagaagtaccgatacacctcaatttgtgaggtgtaccgtagaagttcc 12002750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 110
Target Start/End: Complemental strand, 4673645 - 4673601
Alignment:
Q  66 gagtaccgatacaccttaatttgcgggtgtaccgtagaagttccc 110  Q
    |||||||| ||||||||||||||| |||||||| |||||||||||    
T  4673645 gagtaccggtacaccttaatttgcaggtgtaccttagaagttccc 4673601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 66 - 105
Target Start/End: Complemental strand, 15771353 - 15771314
Alignment:
Q  66 gagtaccgatacaccttaatttgcgggtgtaccgtagaag 105  Q
    |||||||| ||||||||||||| |||||||||||||||||    
T  15771353 gagtaccggtacaccttaatttacgggtgtaccgtagaag 15771314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 19268675 - 19268628
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaattt 48  Q
    |||||||| ||||||||||||||||| ||||||||| || ||||||||    
T  19268675 taaatatcgacaaatagctctttatttcataaaaatgatcgttaattt 19268628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 49
Target Start/End: Complemental strand, 40051315 - 40051276
Alignment:
Q  10 acaaatagctctttattccataaaaataatagttaattta 49  Q
    |||||| ||||||||||||||||||||||| |||||||||    
T  40051315 acaaatcgctctttattccataaaaataatcgttaattta 40051276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 112
Target Start/End: Complemental strand, 3383235 - 3383189
Alignment:
Q  66 gagtaccgatacaccttaatttgcgggtgtaccgtagaagttcccat 112  Q
    |||||||| |||||| |||||| ||| ||||||||||||||||||||    
T  3383235 gagtaccggtacaccgtaatttacggatgtaccgtagaagttcccat 3383189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 11813236 - 11813198
Alignment:
Q  66 gagtaccgatacaccttaatttgcgggtgtaccgtagaa 104  Q
    |||||||| |||||||||||||| |||||||||||||||    
T  11813236 gagtaccggtacaccttaatttgtgggtgtaccgtagaa 11813198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 67 - 111
Target Start/End: Complemental strand, 9122199 - 9122155
Alignment:
Q  67 agtaccgatacaccttaatttgcgggtgtaccgtagaagttccca 111  Q
    ||||||| ||||||||| |||| | ||||||||||||||||||||    
T  9122199 agtaccggtacaccttattttgtgagtgtaccgtagaagttccca 9122155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 86; Significance: 5e-41; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 46215881 - 46215772
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgt 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||| |||||||||| |||||||||    
T  46215881 taaatatcaacaaatagctttttattccataaaaataatagttaatttaaagatttttgaagtaggagtaccggtacacattaatttgcgagtgtaccgt 46215782  T
Q  101 agaagttccc 110  Q
    ||||||||||    
T  46215781 agaagttccc 46215772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 53695495 - 53695386
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgt 100  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || || |||||||| ||||||||||||||| ||||||||||    
T  53695495 taaatatcaacaaataactctttattccataaaaataatagttaatttaaagatttttgaattaggagtaccggtacaccttaatttgcaggtgtaccgt 53695396  T
Q  101 agaagttccc 110  Q
    ||||||||||    
T  53695395 agaagttccc 53695386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 56361425 - 56361318
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataata-gttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccg 99  Q
    |||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||    
T  56361425 taaatatcaacaaatagctctttattccataaaaataataagtaaatttaaagatttttgaagtaggagtaccaatacaccttaatttgcgggtgtaccg 56361326  T
Q  100 tagaagtt 107  Q
    ||||||||    
T  56361325 tagaagtt 56361318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 47302693 - 47302802
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgt 100  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| || | |||||||| ||| ||||||||    
T  47302693 taaatatcaacaaataactctttatttcataaaaataatagttaatttaaagatttttaaagtaggagtaccggtaaaacttaatttacggatgtaccgt 47302792  T
Q  101 agaagttccc 110  Q
    ||||||||||    
T  47302793 agaagttccc 47302802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 9858546 - 9858654
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgt 100  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||||| | |||||| ||||| |||||||| ||||||||||||||| ||||||||||    
T  9858546 taaatatcaacaaatagctttttatttcataaaaataatagttaatttataaatttttgaagtaagagtaccggtacaccttaatttgcaggtgtaccgt 9858645  T
Q  101 agaagttcc 109  Q
    |||||||||    
T  9858646 agaagttcc 9858654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 31908739 - 31908846
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgt 100  Q
    ||||||||||||||||||| |||||| ||||||| | |||||||||||| | |||||| ||||| |||||||| ||||||||||||||||||||||||||    
T  31908739 taaatatcaacaaatagctttttatttcataaaattgatagttaatttataaatttttgaagtaagagtaccggtacaccttaatttgcgggtgtaccgt 31908838  T
Q  101 agaagttc 108  Q
    ||||||||    
T  31908839 agaagttc 31908846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 39161910 - 39161804
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgt 100  Q
    |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||| ||||| |||||||| ||||||| |||||||||| |    
T  39161910 taaatatcaacaaataactctttattctataaaaataatagttaatttaaagatttttgaagtaggagtatcgatacactttaatttacgggtgtaccat 39161811  T
Q  101 agaagtt 107  Q
    | |||||    
T  39161810 aaaagtt 39161804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 2 - 109
Target Start/End: Original strand, 36091356 - 36091463
Alignment:
Q  2 aaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgta 101  Q
    |||||||||||||||||| |||||| ||||||||| |||||||||||| | |||||| ||||| |||||||| ||||||||||||| | |||||||||||    
T  36091356 aaatatcaacaaatagctttttatttcataaaaatgatagttaatttataaatttttgaagtaagagtaccggtacaccttaatttacaggtgtaccgta 36091455  T
Q  102 gaagttcc 109  Q
    ||||||||    
T  36091456 gaagttcc 36091463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 31681483 - 31681592
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgt 100  Q
    |||||||||||||||| |||||||||||||||||||| | |||||||||||  ||||| ||||  |||||| | ||||||||||||| ||||||||||||    
T  31681483 taaatatcaacaaataactctttattccataaaaatatttgttaatttaaatttttttgaagtgggagtactggtacaccttaatttacgggtgtaccgt 31681582  T
Q  101 agaagttccc 110  Q
    ||||||||||    
T  31681583 agaagttccc 31681592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 2 - 97
Target Start/End: Complemental strand, 30891265 - 30891170
Alignment:
Q  2 aaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtac 97  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||| || |||||||||||||   ||||||| |||||||||||||| || |||||    
T  30891265 aaatatcaacaaatagctctttatttcataaaaatgatagttaatatatagatttttaaagttaaagtaccggtacaccttaatttgtggatgtac 30891170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 12 - 110
Target Start/End: Complemental strand, 46004453 - 46004356
Alignment:
Q  12 aaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgtagaagttccc 110  Q
    ||||||||||||||||||||||| || |||||||||||||||||||| ||||| ||||| || ||||||| || || | ||||| ||||||||||||||    
T  46004453 aaatagctctttattccataaaattagtagttaatttaaagatttttgaagta-gagtatcggtacacctcaacttactggtgtgccgtagaagttccc 46004356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 112
Target Start/End: Original strand, 51282241 - 51282343
Alignment:
Q  10 acaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgtagaagttcc 109  Q
    ||||||| || |||||| ||||||||| |||||||||||| | |||||| ||||| |||||||| ||||| |||| ||| |||||||||||||||||| |    
T  51282241 acaaataactttttatttcataaaaatgatagttaatttataaatttttgaagtaagagtaccggtacactttaaattgtgggtgtaccgtagaagtttc 51282340  T
Q  110 cat 112  Q
    |||    
T  51282341 cat 51282343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 66 - 110
Target Start/End: Complemental strand, 11109640 - 11109596
Alignment:
Q  66 gagtaccgatacaccttaatttgcgggtgtaccgtagaagttccc 110  Q
    |||||||| ||||||||||||||||||||||||||||||||||||    
T  11109640 gagtaccggtacaccttaatttgcgggtgtaccgtagaagttccc 11109596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 66 - 112
Target Start/End: Original strand, 28038047 - 28038093
Alignment:
Q  66 gagtaccgatacaccttaatttgcgggtgtaccgtagaagttcccat 112  Q
    |||||||| |||||||||||||| |||||||||||||||||||||||    
T  28038047 gagtaccggtacaccttaatttgtgggtgtaccgtagaagttcccat 28038093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 111
Target Start/End: Original strand, 46663632 - 46663733
Alignment:
Q  10 acaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgtagaagttcc 109  Q
    ||||||| || |||||| ||||||| | ||  |||||||| |||||| | ||| | |||||||| ||||||| ||||| || ||||||||||||||||||    
T  46663632 acaaataactatttatttcataaaattgatcattaatttatagatttatgaagcaagagtaccggtacacctcaatttacgagtgtaccgtagaagttcc 46663731  T
Q  110 ca 111  Q
    ||    
T  46663732 ca 46663733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 66 - 110
Target Start/End: Original strand, 38836212 - 38836256
Alignment:
Q  66 gagtaccgatacaccttaatttgcgggtgtaccgtagaagttccc 110  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||    
T  38836212 gagtaccgatacaccgtaatttgcaggtgtaccgtagaagttccc 38836256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 66 - 110
Target Start/End: Complemental strand, 48578951 - 48578907
Alignment:
Q  66 gagtaccgatacaccttaatttgcgggtgtaccgtagaagttccc 110  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||    
T  48578951 gagtaccggtacaccttaatttacgggtgtaccgtagaagttccc 48578907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 66 - 110
Target Start/End: Original strand, 55722839 - 55722883
Alignment:
Q  66 gagtaccgatacaccttaatttgcgggtgtaccgtagaagttccc 110  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||    
T  55722839 gagtaccggtacaccttaatttgcgggtgtaccgtaaaagttccc 55722883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 112
Target Start/End: Original strand, 32570674 - 32570776
Alignment:
Q  10 acaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcg-ggtgtaccgtagaagttc 108  Q
    ||||||| || |||||| ||||||| | || ||||||||| | |||| | ||||| |||||||| ||||||| |||||| | ||||||||||||||||||    
T  32570674 acaaatacctatttatttcataaaa-tgatcgttaatttataaatttatgaagtaagagtaccggtacacctcaatttgtgaggtgtaccgtagaagttc 32570772  T
Q  109 ccat 112  Q
    ||||    
T  32570773 ccat 32570776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 110
Target Start/End: Complemental strand, 30060630 - 30060530
Alignment:
Q  10 acaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgtagaagttcc 109  Q
    ||||||| || |||||| ||||||| | || |||| |||| |||||| | ||| | ||||| || ||||||| ||||| || ||||||||||||||||||    
T  30060630 acaaataactatttatttcataaaattgatcgttagtttatagatttatgaagcaagagtatcggtacacctcaatttacgagtgtaccgtagaagttcc 30060531  T
Q  110 c 110  Q
    |    
T  30060530 c 30060530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 110
Target Start/End: Original strand, 47302342 - 47302386
Alignment:
Q  66 gagtaccgatacaccttaatttgcgggtgtaccgtagaagttccc 110  Q
    |||||||| |||||| |||||| ||||||||||||||||||||||    
T  47302342 gagtaccggtacaccgtaatttacgggtgtaccgtagaagttccc 47302386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 110
Target Start/End: Complemental strand, 51435856 - 51435812
Alignment:
Q  66 gagtaccgatacaccttaatttgcgggtgtaccgtagaagttccc 110  Q
    |||| ||| |||||||||||||||||||||||| |||||||||||    
T  51435856 gagttccggtacaccttaatttgcgggtgtaccatagaagttccc 51435812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 29646916 - 29646955
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataata 40  Q
    |||||||||||||||| | |||||||||||||||||||||    
T  29646916 taaatatcaacaaataacactttattccataaaaataata 29646955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 66 - 109
Target Start/End: Complemental strand, 41759703 - 41759660
Alignment:
Q  66 gagtaccgatacaccttaatttgcgggtgtaccgtagaagttcc 109  Q
    |||||||| ||||| ||||||| |||||||||||||||||||||    
T  41759703 gagtaccggtacactttaatttacgggtgtaccgtagaagttcc 41759660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 21 - 108
Target Start/End: Complemental strand, 43959083 - 43958996
Alignment:
Q  21 tttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgtagaagttc 108  Q
    |||||| ||||||| | || ||||||||| ||||||   ||||| |||||||| |||||| |||||| |  |||||||||||||||||    
T  43959083 tttatttcataaaattgatcgttaatttatagatttaggaagtaagagtaccggtacaccataatttacaagtgtaccgtagaagttc 43958996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 112
Target Start/End: Complemental strand, 42177386 - 42177340
Alignment:
Q  66 gagtaccgatacaccttaatttgcgggtgtaccgtagaagttcccat 112  Q
    |||||||||||||||| | |||| | |||||||||||||||||||||    
T  42177386 gagtaccgatacacctcattttgtgagtgtaccgtagaagttcccat 42177340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 49286797 - 49286688
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcg-ggtgtaccg 99  Q
    ||||||| || ||||| ||||||||| ||||||| |||| ||||| ||  | || ||| ||||| |||||||| ||||||| |||||| | |||||||||    
T  49286797 taaatattaataaataactctttatttcataaaa-taatcgttaaattgtaaatatttgaagtaggagtaccggtacacctcaatttgtgaggtgtaccg 49286699  T
Q  100 tagaagttccc 110  Q
    |||||| ||||    
T  49286698 tagaagctccc 49286688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 408369 - 408466
Alignment:
Q  10 acaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgtagaagtt 107  Q
    ||||||| || ||||||  |||||| | || |||| |||| |||||| | ||| | |||||||| ||||||| ||||| || ||||||||||||||||    
T  408369 acaaataactatttatttaataaaattgatcgttagtttatagatttatgaagcaagagtaccggtacacctcaatttacgagtgtaccgtagaagtt 408466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 25607790 - 25607694
Alignment:
Q  10 acaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcg-ggtgtaccgtagaagt 106  Q
    ||||||| || |||||| ||||||| |||| ||||||||| | |||| | ||||  |||||||| ||||||| |||||| | ||||||||||||||||    
T  25607790 acaaatacctatttatttcataaaa-taatcgttaatttataaatttatgaagtgagagtaccggtacacctcaatttgtgaggtgtaccgtagaagt 25607694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 112
Target Start/End: Original strand, 31975858 - 31975958
Alignment:
Q  12 aaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcg-ggtgtaccgtagaagttccc 110  Q
    ||||| ||||||||| ||||||| |||| ||||| ||  | || ||||||| | ||||||||||| |||| |||||| | ||| ||||||||||||||||    
T  31975858 aaataactctttatttcataaaa-taatcgttaaattgtaaatatttaaagcaggagtaccgatagacctcaatttgtgaggtctaccgtagaagttccc 31975956  T
Q  111 at 112  Q
    ||    
T  31975957 at 31975958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 104
Target Start/End: Complemental strand, 17616505 - 17616413
Alignment:
Q  12 aaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgtagaa 104  Q
    ||||| ||||||||  ||||||||| || ||||||||| | |||| |||| || | |||| | ||||||||||||   |||||||||||||||    
T  17616505 aaatatctctttatcacataaaaattatcgttaatttataaatttataaaataggtgtactggtacaccttaattgaagggtgtaccgtagaa 17616413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 67 - 111
Target Start/End: Original strand, 29582329 - 29582373
Alignment:
Q  67 agtaccgatacaccttaatttgcgggtgtaccgtagaagttccca 111  Q
    ||||||| ||||||| |||||| | ||||||||||||||||||||    
T  29582329 agtaccggtacacctcaatttgtgagtgtaccgtagaagttccca 29582373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 66 - 110
Target Start/End: Original strand, 52592155 - 52592199
Alignment:
Q  66 gagtaccgatacaccttaatttgcgggtgtaccgtagaagttccc 110  Q
    |||||||| |||||| |||||| ||| ||||||||||||||||||    
T  52592155 gagtaccggtacaccgtaatttacggatgtaccgtagaagttccc 52592199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 29541 - 29651
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaa-ataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccg 99  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| |||||||| ||||||||||||||| |||||||||    
T  29541 taaatatcaacaaatagctctttattccataaaaaataatagttaatttaaagatttttgaagtaggagtaccggtacaccttaatttgcaggtgtaccg 29640  T
Q  100 tagaagttccc 110  Q
    |||| ||||||    
T  29641 tagatgttccc 29651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0604 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0604
Description:

Target: scaffold0604; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 4 - 109
Target Start/End: Original strand, 2320 - 2425
Alignment:
Q  4 atatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgtaga 103  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||| ||||||    
T  2320 atatcaacaaatagctctttattccgtaaaaataatagttaatttaaagatttttgaagtaggagtaccggtacaccttaatttgcgggtgtatcgtaga 2419  T
Q  104 agttcc 109  Q
    | ||||    
T  2420 aattcc 2425  T

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Target: scaffold0283 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0283
Description:

Target: scaffold0283; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 66 - 110
Target Start/End: Original strand, 6600 - 6644
Alignment:
Q  66 gagtaccgatacaccttaatttgcgggtgtaccgtagaagttccc 110  Q
    |||||||| |||||||||| |||||||||||||||||||||||||    
T  6600 gagtaccggtacaccttaaattgcgggtgtaccgtagaagttccc 6644  T

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Target: scaffold0077 (Bit Score: 37; Significance: 0.000000000008; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 66 - 110
Target Start/End: Original strand, 48371 - 48415
Alignment:
Q  66 gagtaccgatacaccttaatttgcgggtgtaccgtagaagttccc 110  Q
    |||||||| |||||||||| |||||||||||||||||||||||||    
T  48371 gagtaccggtacaccttaaattgcgggtgtaccgtagaagttccc 48415  T

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Target: scaffold0077; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 66 - 110
Target Start/End: Original strand, 58126 - 58170
Alignment:
Q  66 gagtaccgatacaccttaatttgcgggtgtaccgtagaagttccc 110  Q
    |||||||| |||||||||| |||||||||||||||||||||||||    
T  58126 gagtaccggtacaccttaaattgcgggtgtaccgtagaagttccc 58170  T

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Target: scaffold0008 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 110
Target Start/End: Original strand, 45379 - 45479
Alignment:
Q  10 acaaatagctctttattccataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgtagaagttcc 109  Q
    ||||||| || |||||| ||||||| | || ||||||||| ||||||   ||||| |||||||| |||||| |||||| || |||||  |||||||||||    
T  45379 acaaataactatttatttcataaaattgatcgttaatttatagatttagtaagtaagagtaccggtacaccataatttacgagtgtagtgtagaagttcc 45478  T
Q  110 c 110  Q
    |    
T  45479 c 45479  T

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Target: scaffold0460 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 8667 - 8631
Alignment:
Q  1 taaatatcaacaaatagctctttattccataaaaata 37  Q
    |||||||||||||||| ||||||||| ||||||||||    
T  8667 taaatatcaacaaataactctttatttcataaaaata 8631  T

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Target: scaffold0059 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 70776 - 70700
Alignment:
Q  28 cataaaaataatagttaatttaaagatttttaaagtatgagtaccgatacaccttaatttgcgggtgtaccgtagaa 104  Q
    ||||||||| |||||||| ||| |||||| | || || | |||| ||||||||||||||   |||||||||||||||    
T  70776 cataaaaattatagttaacttatagatttatgaaataggtgtactgatacaccttaattgaagggtgtaccgtagaa 70700  T

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