View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20177_high_29 (Length: 327)
Name: NF20177_high_29
Description: NF20177
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20177_high_29 |
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Alignment Details
Target: chr8 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 10 - 309
Target Start/End: Complemental strand, 37306304 - 37306006
Alignment:
| Q |
10 |
aaaatctagacagttagatagatctgctgatatatgcatatctactaaaaagtgttttattatactaaaatatttctaatnnnnnnnnnttgtttcatca |
109 |
Q |
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| T |
37306304 |
aaaatctacaaagttagatagatctgctgatatatgcatatctactaaaaagtgttttattatactaaaatatttctagtaaaaaaaaattgtttcatca |
37306205 |
T |
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| Q |
110 |
tttagtataaagttccaaccaaaatgaaagaggtttattaagccnnnnnnnnnnnnnctaagtaaagagagtgatggcacgaaacctatagcggaccctc |
209 |
Q |
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| T |
37306204 |
tttagtataaagttccaaccaaaatgaaagaggtttattaagccaaaaaaaaaaaa-ctaagtaaagagagtgatggcacgaaacctatagcggaccctc |
37306106 |
T |
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| Q |
210 |
ttctcttcgaagagcatacgacgaatagatgataatccattgaaaaaatggccctcattcaaccaatccattcacatacgcgaatagatgatacaccatt |
309 |
Q |
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| T |
37306105 |
tcctcttcgaagagcatacgacgaatagatgataatccattgaaaaaatggccctcattcaaccaatccattcacatacgcgaataggtgatacaccatt |
37306006 |
T |
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