View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20177_low_49 (Length: 262)
Name: NF20177_low_49
Description: NF20177
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20177_low_49 |
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Alignment Details
Target: chr7 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 1 - 256
Target Start/End: Original strand, 45035693 - 45035946
Alignment:
| Q |
1 |
ccagccgattctagtgttttctacaagatgtaagttattcaatcccacggggcactctttcgagaatcttcccacaaatcatccctcaccgttagatcat |
100 |
Q |
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| T |
45035693 |
ccagccgattctagtgttttccacaagatgtaagttattcaatcccacggggcactctttcgagaatcttcccacaaatcatccctcaccgttagatcat |
45035792 |
T |
|
| Q |
101 |
ctcctgacgacacgtggcagttacataaaccaagatctccaccatgcatgatcaagcatagccacaattttcatcaaaacttacaatgtcacctcctacc |
200 |
Q |
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||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45035793 |
ctcctgacgacacgtggcagtcacataaaccaagatctccaccatgcatgatcaagcatagccacaattttcatcaaaacttacaatgtcacctcctacc |
45035892 |
T |
|
| Q |
201 |
acctcttcacgtctttcattataaataacaccttcaccctccacatttcatctcac |
256 |
Q |
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|| |||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45035893 |
ac--cttcacctctttcattataaataacaccttcaccctccacatttcatctcac |
45035946 |
T |
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