View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20177_low_63 (Length: 229)

Name: NF20177_low_63
Description: NF20177
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20177_low_63
NF20177_low_63
[»] scaffold0118 (1 HSPs)
scaffold0118 (154-189)||(14896-14931)
[»] chr7 (8 HSPs)
chr7 (154-189)||(14771486-14771521)
chr7 (154-189)||(15221938-15221973)
chr7 (154-189)||(3835741-3835776)
chr7 (154-189)||(4963013-4963048)
chr7 (154-189)||(35793187-35793222)
chr7 (159-189)||(46672107-46672137)
chr7 (158-186)||(39432587-39432615)
chr7 (26-66)||(48103790-48103830)
[»] chr4 (5 HSPs)
chr4 (154-189)||(17330805-17330840)
chr4 (154-185)||(24538385-24538416)
chr4 (154-189)||(37210061-37210096)
chr4 (154-189)||(53393345-53393380)
chr4 (26-66)||(47931365-47931405)
[»] chr2 (4 HSPs)
chr2 (154-189)||(4959459-4959494)
chr2 (154-189)||(27746444-27746479)
chr2 (154-187)||(42756767-42756800)
chr2 (84-133)||(21925635-21925683)
[»] chr5 (6 HSPs)
chr5 (153-186)||(14654919-14654952)
chr5 (154-189)||(17557933-17557968)
chr5 (154-189)||(19803635-19803670)
chr5 (156-189)||(20201611-20201644)
chr5 (26-66)||(12659364-12659404)
chr5 (159-187)||(17201208-17201236)
[»] chr1 (4 HSPs)
chr1 (154-187)||(52414890-52414923)
chr1 (155-189)||(13254836-13254870)
chr1 (26-66)||(115902-115942)
chr1 (154-186)||(21535881-21535913)
[»] scaffold0006 (1 HSPs)
scaffold0006 (154-186)||(46639-46671)
[»] chr8 (8 HSPs)
chr8 (154-189)||(3443802-3443837)
chr8 (154-189)||(32233605-32233640)
chr8 (154-188)||(1530668-1530702)
chr8 (154-188)||(4418547-4418581)
chr8 (154-188)||(34146160-34146194)
chr8 (154-187)||(7695369-7695402)
chr8 (154-186)||(1358986-1359018)
chr8 (158-186)||(2742997-2743025)
[»] chr6 (4 HSPs)
chr6 (154-189)||(2437913-2437948)
chr6 (158-189)||(9095847-9095878)
chr6 (154-185)||(21527406-21527437)
chr6 (26-66)||(14426651-14426691)
[»] chr3 (9 HSPs)
chr3 (154-189)||(296409-296444)
chr3 (154-189)||(2093751-2093786)
chr3 (154-189)||(5493528-5493563)
chr3 (154-189)||(20841296-20841331)
chr3 (154-189)||(21959757-21959792)
chr3 (26-66)||(5907338-5907378)
chr3 (154-186)||(7259767-7259799)
chr3 (26-66)||(14899896-14899936)
chr3 (157-189)||(25842009-25842041)


Alignment Details
Target: scaffold0118 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 189
Target Start/End: Original strand, 14896 - 14931
Alignment:
Q  154 tttggtattttaagggtatgatttgtcaattatacc 189  Q
    ||||||||||||||||||||||||||||||||||||    
T  14896 tttggtattttaagggtatgatttgtcaattatacc 14931  T

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Target: chr7 (Bit Score: 36; Significance: 0.00000000002; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 189
Target Start/End: Complemental strand, 14771521 - 14771486
Alignment:
Q  154 tttggtattttaagggtatgatttgtcaattatacc 189  Q
    ||||||||||||||||||||||||||||||||||||    
T  14771521 tttggtattttaagggtatgatttgtcaattatacc 14771486  T

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Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 189
Target Start/End: Complemental strand, 15221973 - 15221938
Alignment:
Q  154 tttggtattttaagggtatgatttgtcaattatacc 189  Q
    ||||||||||||||||||||||||||||||||||||    
T  15221973 tttggtattttaagggtatgatttgtcaattatacc 15221938  T

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Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 189
Target Start/End: Complemental strand, 3835776 - 3835741
Alignment:
Q  154 tttggtattttaagggtatgatttgtcaattatacc 189  Q
    |||||||||||||||||| |||||||||||||||||    
T  3835776 tttggtattttaagggtacgatttgtcaattatacc 3835741  T

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Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 189
Target Start/End: Complemental strand, 4963048 - 4963013
Alignment:
Q  154 tttggtattttaagggtatgatttgtcaattatacc 189  Q
    |||||||||||||||||||||||| |||||||||||    
T  4963048 tttggtattttaagggtatgatttatcaattatacc 4963013  T

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Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 189
Target Start/End: Complemental strand, 35793222 - 35793187
Alignment:
Q  154 tttggtattttaagggtatgatttgtcaattatacc 189  Q
    ||||||||||||||||| ||||||||||||||||||    
T  35793222 tttggtattttaagggtgtgatttgtcaattatacc 35793187  T

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Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 189
Target Start/End: Complemental strand, 46672137 - 46672107
Alignment:
Q  159 tattttaagggtatgatttgtcaattatacc 189  Q
    |||||||||||||||||||||||||||||||    
T  46672137 tattttaagggtatgatttgtcaattatacc 46672107  T

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Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 186
Target Start/End: Original strand, 39432587 - 39432615
Alignment:
Q  158 gtattttaagggtatgatttgtcaattat 186  Q
    |||||||||||||||||||||||||||||    
T  39432587 gtattttaagggtatgatttgtcaattat 39432615  T

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Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 48103790 - 48103830
Alignment:
Q  26 aatgacagtaacaacagtctttattatataaaaagttgttt 66  Q
    ||||||| |||||||| ||||||||||| ||||||||||||    
T  48103790 aatgacactaacaacaatctttattatagaaaaagttgttt 48103830  T

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Target: chr4 (Bit Score: 36; Significance: 0.00000000002; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 189
Target Start/End: Original strand, 17330805 - 17330840
Alignment:
Q  154 tttggtattttaagggtatgatttgtcaattatacc 189  Q
    ||||||||||||||||||||||||||||||||||||    
T  17330805 tttggtattttaagggtatgatttgtcaattatacc 17330840  T

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Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 185
Target Start/End: Complemental strand, 24538416 - 24538385
Alignment:
Q  154 tttggtattttaagggtatgatttgtcaatta 185  Q
    ||||||||||||||||||||||||||||||||    
T  24538416 tttggtattttaagggtatgatttgtcaatta 24538385  T

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Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 189
Target Start/End: Complemental strand, 37210096 - 37210061
Alignment:
Q  154 tttggtattttaagggtatgatttgtcaattatacc 189  Q
    ||||||||||||||||||| ||||||||||||||||    
T  37210096 tttggtattttaagggtataatttgtcaattatacc 37210061  T

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Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 189
Target Start/End: Original strand, 53393345 - 53393380
Alignment:
Q  154 tttggtattttaagggtatgatttgtcaattatacc 189  Q
    ||||||||||||||| ||||||||||||||||||||    
T  53393345 tttggtattttaaggatatgatttgtcaattatacc 53393380  T

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Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 47931365 - 47931405
Alignment:
Q  26 aatgacagtaacaacagtctttattatataaaaagttgttt 66  Q
    |||||||  ||||||| ||||||||||||||||||||||||    
T  47931365 aatgacaccaacaacaatctttattatataaaaagttgttt 47931405  T

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Target: chr2 (Bit Score: 36; Significance: 0.00000000002; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 189
Target Start/End: Complemental strand, 4959494 - 4959459
Alignment:
Q  154 tttggtattttaagggtatgatttgtcaattatacc 189  Q
    ||||||||||||||||||||||||||||||||||||    
T  4959494 tttggtattttaagggtatgatttgtcaattatacc 4959459  T

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Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 189
Target Start/End: Original strand, 27746444 - 27746479
Alignment:
Q  154 tttggtattttaagggtatgatttgtcaattatacc 189  Q
    ||||||||||||||||||||||||||||||||||||    
T  27746444 tttggtattttaagggtatgatttgtcaattatacc 27746479  T

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Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 187
Target Start/End: Original strand, 42756767 - 42756800
Alignment:
Q  154 tttggtattttaagggtatgatttgtcaattata 187  Q
    ||||||||||||||||||||||||||||||||||    
T  42756767 tttggtattttaagggtatgatttgtcaattata 42756800  T

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Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 133
Target Start/End: Complemental strand, 21925683 - 21925635
Alignment:
Q  84 aagtataaatatagtttttcaagtttgttacactatttaaatgataaagg 133  Q
    ||||||||||||| ||  |||||||||||||||| |||||||||||||||    
T  21925683 aagtataaatata-ttcatcaagtttgttacactttttaaatgataaagg 21925635  T

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Target: chr5 (Bit Score: 34; Significance: 0.0000000003; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 186
Target Start/End: Original strand, 14654919 - 14654952
Alignment:
Q  153 ctttggtattttaagggtatgatttgtcaattat 186  Q
    ||||||||||||||||||||||||||||||||||    
T  14654919 ctttggtattttaagggtatgatttgtcaattat 14654952  T

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Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 189
Target Start/End: Original strand, 17557933 - 17557968
Alignment:
Q  154 tttggtattttaagggtatgatttgtcaattatacc 189  Q
    |||| |||||||||||||||||||||||||||||||    
T  17557933 tttgatattttaagggtatgatttgtcaattatacc 17557968  T

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Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 189
Target Start/End: Original strand, 19803635 - 19803670
Alignment:
Q  154 tttggtattttaagggtatgatttgtcaattatacc 189  Q
    |||||||||||||||||| |||||||||||||||||    
T  19803635 tttggtattttaagggtacgatttgtcaattatacc 19803670  T

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Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 189
Target Start/End: Original strand, 20201611 - 20201644
Alignment:
Q  156 tggtattttaagggtatgatttgtcaattatacc 189  Q
    ||||||||||||||||| ||||||||||||||||    
T  20201611 tggtattttaagggtataatttgtcaattatacc 20201644  T

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Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 12659364 - 12659404
Alignment:
Q  26 aatgacagtaacaacagtctttattatataaaaagttgttt 66  Q
    ||||||| |||||||| ||||||||||| ||||||||||||    
T  12659364 aatgacactaacaacaatctttattataaaaaaagttgttt 12659404  T

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Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 187
Target Start/End: Original strand, 17201208 - 17201236
Alignment:
Q  159 tattttaagggtatgatttgtcaattata 187  Q
    |||||||||||||||||||||||||||||    
T  17201208 tattttaagggtatgatttgtcaattata 17201236  T

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Target: chr1 (Bit Score: 34; Significance: 0.0000000003; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 187
Target Start/End: Original strand, 52414890 - 52414923
Alignment:
Q  154 tttggtattttaagggtatgatttgtcaattata 187  Q
    ||||||||||||||||||||||||||||||||||    
T  52414890 tttggtattttaagggtatgatttgtcaattata 52414923  T

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Target: chr1; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 189
Target Start/End: Complemental strand, 13254870 - 13254836
Alignment:
Q  155 ttggtattttaagggtatgatttgtcaattatacc 189  Q
    ||||||||||||||||| |||||||||||||||||    
T  13254870 ttggtattttaagggtacgatttgtcaattatacc 13254836  T

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Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 115902 - 115942
Alignment:
Q  26 aatgacagtaacaacagtctttattatataaaaagttgttt 66  Q
    |||||||  ||||||| ||||||||||||||||||||||||    
T  115902 aatgacaccaacaacaatctttattatataaaaagttgttt 115942  T

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Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 186
Target Start/End: Complemental strand, 21535913 - 21535881
Alignment:
Q  154 tttggtattttaagggtatgatttgtcaattat 186  Q
    ||||||||||||| |||||||||||||||||||    
T  21535913 tttggtattttaaaggtatgatttgtcaattat 21535881  T

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Target: scaffold0006 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 186
Target Start/End: Complemental strand, 46671 - 46639
Alignment:
Q  154 tttggtattttaagggtatgatttgtcaattat 186  Q
    |||||||||||||||||||||||||||||||||    
T  46671 tttggtattttaagggtatgatttgtcaattat 46639  T

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Target: chr8 (Bit Score: 32; Significance: 0.000000005; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 189
Target Start/End: Complemental strand, 3443837 - 3443802
Alignment:
Q  154 tttggtattttaagggtatgatttgtcaattatacc 189  Q
    |||||||||||||||||||| |||||||||||||||    
T  3443837 tttggtattttaagggtatgttttgtcaattatacc 3443802  T

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Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 189
Target Start/End: Original strand, 32233605 - 32233640
Alignment:
Q  154 tttggtattttaagggtatgatttgtcaattatacc 189  Q
    ||||||||||||||||| ||||||||||||||||||    
T  32233605 tttggtattttaagggtgtgatttgtcaattatacc 32233640  T

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Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 188
Target Start/End: Complemental strand, 1530702 - 1530668
Alignment:
Q  154 tttggtattttaagggtatgatttgtcaattatac 188  Q
    |||||||||||||||||| ||||||||||||||||    
T  1530702 tttggtattttaagggtacgatttgtcaattatac 1530668  T

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Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 188
Target Start/End: Original strand, 4418547 - 4418581
Alignment:
Q  154 tttggtattttaagggtatgatttgtcaattatac 188  Q
    ||||||||||| |||||||||||||||||||||||    
T  4418547 tttggtattttgagggtatgatttgtcaattatac 4418581  T

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Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 188
Target Start/End: Original strand, 34146160 - 34146194
Alignment:
Q  154 tttggtattttaagggtatgatttgtcaattatac 188  Q
    |||||||||||||||||| ||||||||||||||||    
T  34146160 tttggtattttaagggtacgatttgtcaattatac 34146194  T

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Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 187
Target Start/End: Complemental strand, 7695402 - 7695369
Alignment:
Q  154 tttggtattttaagggtatgatttgtcaattata 187  Q
    |||||||||||||||||| |||||||||||||||    
T  7695402 tttggtattttaagggtacgatttgtcaattata 7695369  T

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Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 186
Target Start/End: Complemental strand, 1359018 - 1358986
Alignment:
Q  154 tttggtattttaagggtatgatttgtcaattat 186  Q
    |||| ||||||||||||||||||||||||||||    
T  1359018 tttgatattttaagggtatgatttgtcaattat 1358986  T

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Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 186
Target Start/End: Complemental strand, 2743025 - 2742997
Alignment:
Q  158 gtattttaagggtatgatttgtcaattat 186  Q
    |||||||||||||||||||||||||||||    
T  2743025 gtattttaagggtatgatttgtcaattat 2742997  T

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Target: chr6 (Bit Score: 32; Significance: 0.000000005; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 189
Target Start/End: Complemental strand, 2437948 - 2437913
Alignment:
Q  154 tttggtattttaagggtatgatttgtcaattatacc 189  Q
    ||||| ||||||||||||||||||||||||||||||    
T  2437948 tttggaattttaagggtatgatttgtcaattatacc 2437913  T

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Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 189
Target Start/End: Complemental strand, 9095878 - 9095847
Alignment:
Q  158 gtattttaagggtatgatttgtcaattatacc 189  Q
    ||||||||||||||||||||||||||||||||    
T  9095878 gtattttaagggtatgatttgtcaattatacc 9095847  T

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Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 185
Target Start/End: Complemental strand, 21527437 - 21527406
Alignment:
Q  154 tttggtattttaagggtatgatttgtcaatta 185  Q
    ||||||||||||||||||||||||||||||||    
T  21527437 tttggtattttaagggtatgatttgtcaatta 21527406  T

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Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 14426691 - 14426651
Alignment:
Q  26 aatgacagtaacaacagtctttattatataaaaagttgttt 66  Q
    |||||||  ||||||| ||||||||||||||||||||||||    
T  14426691 aatgacatcaacaacaatctttattatataaaaagttgttt 14426651  T

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Target: chr3 (Bit Score: 32; Significance: 0.000000005; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 189
Target Start/End: Original strand, 296409 - 296444
Alignment:
Q  154 tttggtattttaagggtatgatttgtcaattatacc 189  Q
    |||||||||||||||||||||||||||| |||||||    
T  296409 tttggtattttaagggtatgatttgtcagttatacc 296444  T

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Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 189
Target Start/End: Original strand, 2093751 - 2093786
Alignment:
Q  154 tttggtattttaagggtatgatttgtcaattatacc 189  Q
    |||| |||||||||||||||||||||||||||||||    
T  2093751 tttgatattttaagggtatgatttgtcaattatacc 2093786  T

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Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 189
Target Start/End: Original strand, 5493528 - 5493563
Alignment:
Q  154 tttggtattttaagggtatgatttgtcaattatacc 189  Q
    |||||||||||||||||| |||||||||||||||||    
T  5493528 tttggtattttaagggtacgatttgtcaattatacc 5493563  T

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Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 189
Target Start/End: Original strand, 20841296 - 20841331
Alignment:
Q  154 tttggtattttaagggtatgatttgtcaattatacc 189  Q
    |||||||||||||||||| |||||||||||||||||    
T  20841296 tttggtattttaagggtacgatttgtcaattatacc 20841331  T

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Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 189
Target Start/End: Complemental strand, 21959792 - 21959757
Alignment:
Q  154 tttggtattttaagggtatgatttgtcaattatacc 189  Q
    |||||||||||||||||||||||| |||||||||||    
T  21959792 tttggtattttaagggtatgatttatcaattatacc 21959757  T

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Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 5907338 - 5907378
Alignment:
Q  26 aatgacagtaacaacagtctttattatataaaaagttgttt 66  Q
    |||||||  ||||||| ||||||||||||||||||||||||    
T  5907338 aatgacaccaacaacaatctttattatataaaaagttgttt 5907378  T

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Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 186
Target Start/End: Complemental strand, 7259799 - 7259767
Alignment:
Q  154 tttggtattttaagggtatgatttgtcaattat 186  Q
    |||| ||||||||||||||||||||||||||||    
T  7259799 tttgatattttaagggtatgatttgtcaattat 7259767  T

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Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 14899936 - 14899896
Alignment:
Q  26 aatgacagtaacaacagtctttattatataaaaagttgttt 66  Q
    |||||||  ||||||| ||||||||||||||||||||||||    
T  14899936 aatgacaccaacaacaatctttattatataaaaagttgttt 14899896  T

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Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 189
Target Start/End: Complemental strand, 25842041 - 25842009
Alignment:
Q  157 ggtattttaagggtatgatttgtcaattatacc 189  Q
    ||||||||||||||||||||||||||| |||||    
T  25842041 ggtattttaagggtatgatttgtcaatcatacc 25842009  T

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