View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20178_high_12 (Length: 226)
Name: NF20178_high_12
Description: NF20178
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20178_high_12 |
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Alignment Details
Target: chr6 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 10 - 209
Target Start/End: Original strand, 35197876 - 35198075
Alignment:
| Q |
10 |
cgaagaatatacccaaagtttcacgcatgcatcaacgatgactggtacaaagcaaacaaaaatagtaatggcggcctgatcaacttcaagcccataatgc |
109 |
Q |
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| T |
35197876 |
cgaagaaaatacccaaagtttcacgcatgcatcaacgatgactggtacaaagcaaacaaaaatagtaatggcggcctgatcaacttcaagcccataatgc |
35197975 |
T |
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| Q |
110 |
tcgacaattatctctatcagagtttgccaaccagattcagaatgatacctgtaggcgtcccaatatgcaacaaaagagtaaacagctcgaaaagagaagc |
209 |
Q |
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| T |
35197976 |
tcgacaattatctctatcagagtttgccaaccagattcagaatgatacctgtaggcgtcccaatatgcaacaaaagagtaaacaactcgaaaagagaagc |
35198075 |
T |
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