View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20178_low_11 (Length: 268)

Name: NF20178_low_11
Description: NF20178
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20178_low_11
NF20178_low_11
[»] chr3 (11 HSPs)
chr3 (8-145)||(50562150-50562294)
chr3 (9-79)||(35531799-35531869)
chr3 (8-146)||(39098308-39098443)
chr3 (8-79)||(6004035-6004106)
chr3 (10-78)||(21586489-21586557)
chr3 (16-99)||(32880684-32880772)
chr3 (8-79)||(33002887-33002958)
chr3 (26-79)||(48032783-48032836)
chr3 (211-250)||(50562045-50562084)
chr3 (92-142)||(34794971-34795021)
chr3 (8-40)||(43030796-43030828)
[»] chr7 (16 HSPs)
chr7 (8-99)||(32823966-32824057)
chr7 (8-99)||(22366820-22366911)
chr7 (8-137)||(42910248-42910389)
chr7 (8-96)||(10069933-10070021)
chr7 (8-99)||(31876258-31876354)
chr7 (9-79)||(24360935-24361005)
chr7 (8-79)||(27054370-27054441)
chr7 (8-99)||(31982283-31982374)
chr7 (9-79)||(36921193-36921265)
chr7 (8-79)||(13852676-13852747)
chr7 (8-79)||(18672862-18672933)
chr7 (8-79)||(43429538-43429609)
chr7 (16-131)||(36509024-36509142)
chr7 (11-83)||(48675485-48675557)
chr7 (8-51)||(5932989-5933032)
chr7 (92-136)||(10672226-10672270)
[»] chr4 (15 HSPs)
chr4 (8-135)||(10219053-10219187)
chr4 (8-99)||(8176224-8176315)
chr4 (12-98)||(52345225-52345311)
chr4 (10-99)||(31301772-31301861)
chr4 (8-79)||(6333686-6333757)
chr4 (8-79)||(40806462-40806533)
chr4 (8-79)||(48996449-48996520)
chr4 (10-79)||(32137064-32137133)
chr4 (8-79)||(40899726-40899797)
chr4 (12-79)||(52345081-52345148)
chr4 (13-79)||(43630908-43630974)
chr4 (10-79)||(30193622-30193691)
chr4 (8-79)||(23937164-23937235)
chr4 (98-146)||(6333798-6333846)
chr4 (92-136)||(42558130-42558174)
[»] chr5 (17 HSPs)
chr5 (8-79)||(12165585-12165656)
chr5 (9-79)||(36103253-36103323)
chr5 (8-79)||(2226525-2226596)
chr5 (8-79)||(36176531-36176602)
chr5 (9-79)||(36176762-36176832)
chr5 (7-79)||(332923-332997)
chr5 (8-79)||(12680717-12680788)
chr5 (23-97)||(17084499-17084573)
chr5 (11-79)||(30265435-30265503)
chr5 (8-79)||(32520862-32520933)
chr5 (8-79)||(38434055-38434126)
chr5 (7-69)||(42545024-42545086)
chr5 (8-57)||(35893356-35893405)
chr5 (13-79)||(10174434-10174496)
chr5 (8-79)||(9161352-9161421)
chr5 (92-136)||(8409383-8409427)
chr5 (60-137)||(35359454-35359533)
[»] chr2 (9 HSPs)
chr2 (8-79)||(17916500-17916571)
chr2 (9-79)||(25297898-25297968)
chr2 (10-79)||(34910681-34910750)
chr2 (8-79)||(44979417-44979488)
chr2 (10-79)||(19936762-19936831)
chr2 (8-79)||(44035679-44035750)
chr2 (9-79)||(11376257-11376327)
chr2 (8-79)||(18360170-18360241)
chr2 (92-136)||(36412929-36412973)
[»] chr8 (10 HSPs)
chr8 (8-99)||(14549598-14549694)
chr8 (8-79)||(36827434-36827505)
chr8 (8-79)||(30392449-30392520)
chr8 (8-79)||(6200578-6200649)
chr8 (8-75)||(18169672-18169739)
chr8 (8-75)||(18633238-18633305)
chr8 (8-99)||(3682288-3682384)
chr8 (23-79)||(44673109-44673165)
chr8 (8-79)||(10661518-10661589)
chr8 (8-79)||(33068962-33069033)
[»] chr6 (6 HSPs)
chr6 (8-79)||(13801619-13801690)
chr6 (8-79)||(33550693-33550764)
chr6 (8-79)||(15860097-15860168)
chr6 (8-79)||(35039580-35039651)
chr6 (10-73)||(10591210-10591273)
chr6 (8-78)||(25137514-25137584)
[»] chr1 (14 HSPs)
chr1 (8-79)||(24910695-24910766)
chr1 (8-99)||(51252042-51252133)
chr1 (8-79)||(11899409-11899480)
chr1 (8-79)||(39256277-39256348)
chr1 (8-78)||(44918911-44918981)
chr1 (8-79)||(16529133-16529204)
chr1 (8-79)||(33474811-33474882)
chr1 (8-79)||(33910418-33910489)
chr1 (10-99)||(32954451-32954545)
chr1 (7-99)||(6722434-6722530)
chr1 (8-99)||(45692166-45692262)
chr1 (92-146)||(8211687-8211741)
chr1 (45-99)||(29390096-29390150)
chr1 (8-40)||(1160698-1160730)
[»] scaffold0029 (2 HSPs)
scaffold0029 (10-79)||(40216-40285)
scaffold0029 (10-79)||(47412-47481)
[»] scaffold0013 (2 HSPs)
scaffold0013 (8-79)||(129012-129083)
scaffold0013 (21-78)||(106418-106475)
[»] scaffold0059 (2 HSPs)
scaffold0059 (8-71)||(69185-69248)
scaffold0059 (9-71)||(77291-77353)


Alignment Details
Target: chr3 (Bit Score: 99; Significance: 6e-49; HSPs: 11)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 8 - 145
Target Start/End: Complemental strand, 50562294 - 50562150
Alignment:
Q  8 agattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttttgttgctgagatg-------caaaccga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||       |||| |||    
T  50562294 agattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttggggtttggttttgttgttgagatgcaaatcgcaaatcga 50562195  T
Q  101 accgaatcgcacgattcaatgtaaaagtcatccgaatcaagtgcg 145  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||    
T  50562194 accgaatcgcacgattcagtgtaaaagtcatccgaaccaagtgcg 50562150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 35531869 - 35531799
Alignment:
Q  9 gattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttt 79  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35531869 gattattcttgagctatgcaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttt 35531799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 8 - 146
Target Start/End: Original strand, 39098308 - 39098443
Alignment:
Q  8 agattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttttgttgctgagatgcaaac--cgaaccga 105  Q
    |||||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||||| |     |||||||||||||||||  | || |||    
T  39098308 agattattcttgagctatttaattgtgttagtacatgtttaagtaatattcattattcttgcggttcg-----gttgctgagatgcaaaccacaaatcga 39098402  T
Q  106 atcgcacgattcaatgtaaaagtcatccgaatcaagtgcgg 146  Q
    | |||||| |||| || |||||||||||||| |||||||||    
T  39098403 accgcacggttcagtgcaaaagtcatccgaaccaagtgcgg 39098443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 8 - 79
Target Start/End: Complemental strand, 6004106 - 6004035
Alignment:
Q  8 agattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttt 79  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  6004106 agattattcttgggctatgtaattgggctagtacatgtttaagtaacattcattattcttgcggtttggttt 6004035  T

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Target: chr3; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 10 - 78
Target Start/End: Complemental strand, 21586557 - 21586489
Alignment:
Q  10 attattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtt 78  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  21586557 attattcttgaactatgtaatttggctagtacatgtttaagtaatattcattattcttgcgatttggtt 21586489  T

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Target: chr3; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 32880684 - 32880772
Alignment:
Q  16 cttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttt-----tgttgctgagatgcaaaccg 99  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||      |||||||||||||||||||    
T  32880684 cttgagctatgtaattggactagtacatgtttaagtaatattcatttttcttgcggtttggtttggttcggttgctgagatgcaaaccg 32880772  T

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Target: chr3; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 8 - 79
Target Start/End: Original strand, 33002887 - 33002958
Alignment:
Q  8 agattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttt 79  Q
    |||||||| ||||||||||||||||| || |||||| |||||| ||||||||||||||||||||||||||||    
T  33002887 agattattattgagctatgtaattggactggtacatatttaagaaatattcattattcttgcggtttggttt 33002958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 79
Target Start/End: Complemental strand, 48032836 - 48032783
Alignment:
Q  26 gtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttt 79  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  48032836 gtaattgggctagtacatgtttaagtaatattcatgattcttgcggtttggttt 48032783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 211 - 250
Target Start/End: Complemental strand, 50562084 - 50562045
Alignment:
Q  211 gaacacccctaattcgaacaacgttacttggagaaagaac 250  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  50562084 gaacacccctaattcgaacgacgttacttggagaaagaac 50562045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 142
Target Start/End: Original strand, 34794971 - 34795021
Alignment:
Q  92 gcaaaccgaaccgaatcgcacgattcaatgtaaaagtcatccgaatcaagt 142  Q
    ||||||||||||||| |||||| |||| | ||||||||||||||| |||||    
T  34794971 gcaaaccgaaccgaaccgcacggttcagtctaaaagtcatccgaaccaagt 34795021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 40
Target Start/End: Original strand, 43030796 - 43030828
Alignment:
Q  8 agattattcttgagctatgtaattgggctagta 40  Q
    |||||||||||||||||||||||| ||||||||    
T  43030796 agattattcttgagctatgtaatttggctagta 43030828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 84; Significance: 5e-40; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 8 - 99
Target Start/End: Original strand, 32823966 - 32824057
Alignment:
Q  8 agattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttttgttgctgagatgcaaaccg 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  32823966 agattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcatgcggtttggtttggttgctgagatgcaaaccg 32824057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 8 - 99
Target Start/End: Original strand, 22366820 - 22366911
Alignment:
Q  8 agattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttttgttgctgagatgcaaaccg 99  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  22366820 agattattcttgagctatgtaattgggctagtacatgtttgagtaatattcattattcttgcggtttggtttggttgctaagatgcaaaccg 22366911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 8 - 137
Target Start/End: Complemental strand, 42910389 - 42910248
Alignment:
Q  8 agattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttt-----tgttgctgagat-------gcaa 95  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      |||||||||||       ||||    
T  42910389 agattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggttcggttgctgagatgcaaaccgcaa 42910290  T
Q  96 accgaaccgaatcgcacgattcaatgtaaaagtcatccgaat 137  Q
    ||||||||||| |||||| |||| || |||||||||||||||    
T  42910289 accgaaccgaaccgcacggttcagtgcaaaagtcatccgaat 42910248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 10069933 - 10070021
Alignment:
Q  8 agattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttttgttgctgagatgcaaa 96  Q
    |||||||||||| |||||||||||||||  ||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  10069933 agattattcttgggctatgtaattgggccggtacaagtttaagtaatattgattattcttgcggtttggtttggttgctgagatgcaaa 10070021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 8 - 99
Target Start/End: Complemental strand, 31876354 - 31876258
Alignment:
Q  8 agattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttg-----gttttgttgctgagatgcaaaccg 99  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||     |||| |||||||||||||||||||    
T  31876354 agattattcttgagctatgtaactgggctagtacatgtttaagtaatattcattatttttgcggtttggtttggtttggttgctgagatgcaaaccg 31876258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 24361005 - 24360935
Alignment:
Q  9 gattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttt 79  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  24361005 gattattcttgagctatgtaattgggctagtacatatttaagtaatagtcattattcttgcggtttggttt 24360935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 8 - 79
Target Start/End: Complemental strand, 27054441 - 27054370
Alignment:
Q  8 agattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttt 79  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  27054441 agattattcttgagttatgtaattgggctagtacatatttaagtaatattcattattcttgtggtttggttt 27054370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 8 - 99
Target Start/End: Complemental strand, 31982374 - 31982283
Alignment:
Q  8 agattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttttgttgctgagatgcaaaccg 99  Q
    |||||||||||| |||||||||||||||| |||||  ||||||||||||| |||||| |||||||||||||| |||||| ||||||||||||    
T  31982374 agattattcttgggctatgtaattgggctggtacaaatttaagtaatattgattatttttgcggtttggtttggttgctaagatgcaaaccg 31982283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 36921265 - 36921193
Alignment:
Q  9 gattattcttgagctatgtaattgggc--tagtacatgtttaagtaatattcattattcttgcggtttggttt 79  Q
    ||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||    
T  36921265 gattattcttgagctatgtaattgggggttagtacatgtttaagtaatattcattattcttgcggtttggttt 36921193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 8 - 79
Target Start/End: Original strand, 13852676 - 13852747
Alignment:
Q  8 agattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttt 79  Q
    ||||||||||||||||||||||||| | |||||||| ||||| ||||||||||||||||||| |||||||||    
T  13852676 agattattcttgagctatgtaattgagttagtacatatttaaataatattcattattcttgcagtttggttt 13852747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 8 - 79
Target Start/End: Complemental strand, 18672933 - 18672862
Alignment:
Q  8 agattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttt 79  Q
    ||||||||| || |||||||||||||||||||||| |||||||||||||| |||||| ||||||||||||||    
T  18672933 agattattcctgtgctatgtaattgggctagtacaagtttaagtaatattgattattattgcggtttggttt 18672862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 8 - 79
Target Start/End: Original strand, 43429538 - 43429609
Alignment:
Q  8 agattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttt 79  Q
    ||||| |||||||||||||||||||| | |||||| |||||||||||| |||||||||||||||||||||||    
T  43429538 agatttttcttgagctatgtaattggacgagtacacgtttaagtaatagtcattattcttgcggtttggttt 43429609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 131
Target Start/End: Original strand, 36509024 - 36509142
Alignment:
Q  16 cttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttttgttgctgaga---tgcaaaccgaaccgaatcgcac 112  Q
    |||| |||||||||||||||| |||||  ||||||||||||| ||||||||||||||||||||   ||||||| |    ||||||| ||||||| |||||    
T  36509024 cttgggctatgtaattgggctcgtacaaatttaagtaatattgattattcttgcggtttggttcgattgctgacaaaccgcaaaccaaaccgaaccgcac 36509123  T
Q  113 gattcaatgtaaaagtcat 131  Q
    | ||||||| |||||||||    
T  36509124 ggttcaatgcaaaagtcat 36509142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 83
Target Start/End: Original strand, 48675485 - 48675557
Alignment:
Q  11 ttattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttttgtt 83  Q
    ||||| || |||||||||||| ||||| ||||||||||||||||||| ||||||||| ||||||| |||||||    
T  48675485 ttattttttagctatgtaattaggctaatacatgtttaagtaatatttattattcttacggtttgattttgtt 48675557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 5932989 - 5933032
Alignment:
Q  8 agattattcttgagctatgtaattgggctagtacatgtttaagt 51  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  5932989 agattattcttgagctatgtaattgggctagtacatgtttaagt 5933032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 136
Target Start/End: Original strand, 10672226 - 10672270
Alignment:
Q  92 gcaaaccgaaccgaatcgcacgattcaatgtaaaagtcatccgaa 136  Q
    ||||||||||||||| |||||| |||| | |||||||||||||||    
T  10672226 gcaaaccgaaccgaaccgcacggttcagtctaaaagtcatccgaa 10672270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 77; Significance: 8e-36; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 8 - 135
Target Start/End: Original strand, 10219053 - 10219187
Alignment:
Q  8 agattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttttgttgctgagatgcaaaccg-------a 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||   ||||||||||||||       |    
T  10219053 agattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttggtacttgagatgcaaaccgcaaaccaa 10219152  T
Q  101 accgaatcgcacgattcaatgtaaaagtcatccga 135  Q
    |||||| ||| || |||| ||||||||||||||||    
T  10219153 accgaaccgcgcggttcagtgtaaaagtcatccga 10219187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 8 - 99
Target Start/End: Complemental strand, 8176315 - 8176224
Alignment:
Q  8 agattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttttgttgctgagatgcaaaccg 99  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  8176315 agattatttttgggctatgtaattgggctagtacatgtttaagtaatcttcattattcttgcggtttggtttggttgctgagatgcaaaccg 8176224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 12 - 98
Target Start/End: Original strand, 52345225 - 52345311
Alignment:
Q  12 tattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttttgttgctgagatgcaaacc 98  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  52345225 tattcttgagctatgcaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttcggttgctgagatgcaaacc 52345311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 10 - 99
Target Start/End: Original strand, 31301772 - 31301861
Alignment:
Q  10 attattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttttgttgctgagatgcaaaccg 99  Q
    |||||||||||| ||||||||||||||| |||| |||||||||||||| ||||||||||||||||||||  |||||||||||||||||||    
T  31301772 attattcttgagttatgtaattgggctaatacaagtttaagtaatattgattattcttgcggtttggttcggttgctgagatgcaaaccg 31301861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 8 - 79
Target Start/End: Original strand, 6333686 - 6333757
Alignment:
Q  8 agattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttt 79  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  6333686 agattattcttgagctatgtaattgggctagtacatatttaagtaatattcattattcttgcggtttagttt 6333757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 8 - 79
Target Start/End: Complemental strand, 40806533 - 40806462
Alignment:
Q  8 agattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttt 79  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  40806533 agattattcttgagctatgtaattgagctagtacatatttaagtaatattcattattcttgcggtttggttt 40806462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 8 - 79
Target Start/End: Original strand, 48996449 - 48996520
Alignment:
Q  8 agattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttt 79  Q
    |||||||||||  ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  48996449 agattattcttaggctatgtaattaggctagtacatgtttaagtaatattcattattcttgcggtttggttt 48996520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 10 - 79
Target Start/End: Original strand, 32137064 - 32137133
Alignment:
Q  10 attattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttt 79  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  32137064 attattcttaagctatgtaattgggctagtacatgtttaagtaatattcatcattcttgtggtttggttt 32137133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 8 - 79
Target Start/End: Complemental strand, 40899797 - 40899726
Alignment:
Q  8 agattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttt 79  Q
    ||||||| |||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  40899797 agattatccttgggctatgtaattgggctattacatgtttaagtaacattcattattcttgcggtttggttt 40899726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 12 - 79
Target Start/End: Original strand, 52345081 - 52345148
Alignment:
Q  12 tattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttt 79  Q
    ||||||||||||||| ||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  52345081 tattcttgagctatgcaatcggactagtacatgtttaagtaatattcattattcttgcggtttggttt 52345148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 79
Target Start/End: Original strand, 43630908 - 43630974
Alignment:
Q  13 attcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttt 79  Q
    |||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  43630908 attcttgagctatgtagttgggctattacatttttaagtaatattcattattcttgcggtttggttt 43630974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 10 - 79
Target Start/End: Complemental strand, 30193691 - 30193622
Alignment:
Q  10 attattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttt 79  Q
    ||||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||||| ||||||    
T  30193691 attattcttgagctatgtaattgggataatacatatttaagtaatattcattattcttgcggtatggttt 30193622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 8 - 79
Target Start/End: Complemental strand, 23937235 - 23937164
Alignment:
Q  8 agattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttt 79  Q
    |||||||||||||| ||||||||||| |||||| |||||||||||||||| |||||||||||||||| ||||    
T  23937235 agattattcttgagttatgtaattggactagtatatgtttaagtaatatttattattcttgcggtttagttt 23937164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 146
Target Start/End: Original strand, 6333798 - 6333846
Alignment:
Q  98 cgaaccgaatcgcacgattcaatgtaaaagtcatccgaatcaagtgcgg 146  Q
    ||||||||||||| || |||| ||||||||||||| ||| |||||||||    
T  6333798 cgaaccgaatcgcgcggttcagtgtaaaagtcatctgaaccaagtgcgg 6333846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 136
Target Start/End: Original strand, 42558130 - 42558174
Alignment:
Q  92 gcaaaccgaaccgaatcgcacgattcaatgtaaaagtcatccgaa 136  Q
    ||||||||||||||| |||||| |||| | |||||||||||||||    
T  42558130 gcaaaccgaaccgaaccgcacggttcagtctaaaagtcatccgaa 42558174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 72; Significance: 8e-33; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 8 - 79
Target Start/End: Complemental strand, 12165656 - 12165585
Alignment:
Q  8 agattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttt 79  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12165656 agattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttt 12165585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 36103323 - 36103253
Alignment:
Q  9 gattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttt 79  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  36103323 gattattcttgagctatgtagttgggctagtacatgttcaagtaatattcattattcttgcggtttggttt 36103253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 8 - 79
Target Start/End: Complemental strand, 2226596 - 2226525
Alignment:
Q  8 agattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttt 79  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  2226596 agattattcatgagctatgtaattgggctaatacatgtttaagtaatattcattattctggcggtttggttt 2226525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 8 - 79
Target Start/End: Complemental strand, 36176602 - 36176531
Alignment:
Q  8 agattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttt 79  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  36176602 agatttttcttgagctatgtaattgggctagtacacgtttaagtaatagtcattattcttgcggtttggttt 36176531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 36176832 - 36176762
Alignment:
Q  9 gattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttt 79  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  36176832 gatttttcttgagctatgtaattgggctagtacacgtttaagtaatagtcattattcttgcggtttggttt 36176762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 79
Target Start/End: Complemental strand, 332997 - 332923
Alignment:
Q  7 tagattattcttgagctat--gtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttt 79  Q
    |||||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  332997 tagattattcttgagctatatgtaattgggccagtacatgtttaagtaatattcattattcttgcggtttagttt 332923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 8 - 79
Target Start/End: Complemental strand, 12680788 - 12680717
Alignment:
Q  8 agattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttt 79  Q
    |||||||| || || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  12680788 agattatttttaagttatgtaattgggctagtacatgtttaagtaatattcatcattcttgcggtttggttt 12680717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 23 - 97
Target Start/End: Complemental strand, 17084573 - 17084499
Alignment:
Q  23 tatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttttgttgctgagatgcaaac 97  Q
    |||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||  |||||||||||||||||    
T  17084573 tatgtaattgggttagtacaagtttaagtaatattgattattcttgcggtttggttcggttgctgagatgcaaac 17084499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 79
Target Start/End: Complemental strand, 30265503 - 30265435
Alignment:
Q  11 ttattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttt 79  Q
    ||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||    
T  30265503 ttatttttgagctatgtaattgggctagcacatgattaagtaatattcattattcttgcgatttggttt 30265435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 8 - 79
Target Start/End: Complemental strand, 32520933 - 32520862
Alignment:
Q  8 agattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttt 79  Q
    ||||||||||| |  ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  32520933 agattattcttaaattatgtaattgggctagtacatctttaagtaatattcatcattcttgcggtttggttt 32520862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 8 - 79
Target Start/End: Original strand, 38434055 - 38434126
Alignment:
Q  8 agattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttt 79  Q
    |||||||||||  |||||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||    
T  38434055 agattattcttaggctatgtaattgggctagtacaagtttaagtaatatttcttattcttgcggtttggttt 38434126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 42545024 - 42545086
Alignment:
Q  7 tagattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgc 69  Q
    ||||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||||||||    
T  42545024 tagattattcttgagctatgttattgggctattacatatttaagtaatattcattattcttgc 42545086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 8 - 57
Target Start/End: Original strand, 35893356 - 35893405
Alignment:
Q  8 agattattcttgagctatgtaattgggctagtacatgtttaagtaatatt 57  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35893356 agattattcttgagctatgtaattgggctagtacatgtttaagtaatatt 35893405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 79
Target Start/End: Original strand, 10174434 - 10174496
Alignment:
Q  13 attcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttt 79  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||||||    ||||||||||||||    
T  10174434 attcttgagttatgtaattgggatagtacatgtttaagtaatattcatt----ttgcggtttggttt 10174496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 79
Target Start/End: Original strand, 9161352 - 9161421
Alignment:
Q  8 agattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttt 79  Q
    ||||||||  ||||||||||  |||||||||| ||| ||||||||||||||||||||||||||||| |||||    
T  9161352 agattatttctgagctatgt--ttgggctagtgcatatttaagtaatattcattattcttgcggttgggttt 9161421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 136
Target Start/End: Original strand, 8409383 - 8409427
Alignment:
Q  92 gcaaaccgaaccgaatcgcacgattcaatgtaaaagtcatccgaa 136  Q
    ||||||||||||||| ||| ||||||| | |||||||||||||||    
T  8409383 gcaaaccgaaccgaaccgcgcgattcagtctaaaagtcatccgaa 8409427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 137
Target Start/End: Original strand, 35359454 - 35359533
Alignment:
Q  60 ttattcttgcggtttggttttgttgctgagatgcaaaccg--aaccgaatcgcacgattcaatgtaaaagtcatccgaat 137  Q
    |||||||||||||||||||| |||  ||||||||||||||  || |||| |||||  |||| || |||| ||||||||||    
T  35359454 ttattcttgcggtttggtttggtttttgagatgcaaaccgcaaatcgaaccgcactgttcagtgcaaaaatcatccgaat 35359533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 72; Significance: 8e-33; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 8 - 79
Target Start/End: Complemental strand, 17916571 - 17916500
Alignment:
Q  8 agattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttt 79  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17916571 agattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttt 17916500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 25297968 - 25297898
Alignment:
Q  9 gattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttt 79  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25297968 gattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttt 25297898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 10 - 79
Target Start/End: Original strand, 34910681 - 34910750
Alignment:
Q  10 attattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttt 79  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  34910681 attattcttgggctatgtaattgggttagtacatgtttaagtaatattcattattcttgcggtttggttt 34910750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 8 - 79
Target Start/End: Complemental strand, 44979488 - 44979417
Alignment:
Q  8 agattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttt 79  Q
    ||||||||| || ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  44979488 agattattcctgggctatgtaattgggctagtacatgtttaagtaacattcattattcttgcggtttggttt 44979417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 10 - 79
Target Start/End: Complemental strand, 19936831 - 19936762
Alignment:
Q  10 attattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttt 79  Q
    ||||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  19936831 attattcttgagctatgtatttgagctagtacatgtataagtaatattcattattcttgcggtttggttt 19936762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 8 - 79
Target Start/End: Original strand, 44035679 - 44035750
Alignment:
Q  8 agattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttt 79  Q
    |||||||||||||| ||||||| || ||||||||||||||||||||||||||||||| ||||||||||||||    
T  44035679 agattattcttgagttatgtaactgagctagtacatgtttaagtaatattcattatttttgcggtttggttt 44035750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 11376257 - 11376327
Alignment:
Q  9 gattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttt 79  Q
    ||||||||||| |||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  11376257 gattattcttgggctatgcaattgagctagtacatgtttaagtaatattcagtattcttgcggtttggttt 11376327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 8 - 79
Target Start/End: Original strand, 18360170 - 18360241
Alignment:
Q  8 agattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttt 79  Q
    |||||||| | | |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  18360170 agattattttcgggctatgtaattgggctagtacaagtttaagtaatattgattattcttgcggtttggttt 18360241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 136
Target Start/End: Complemental strand, 36412973 - 36412929
Alignment:
Q  92 gcaaaccgaaccgaatcgcacgattcaatgtaaaagtcatccgaa 136  Q
    ||||||||||||||| |||||| |||| | |||||||||||||||    
T  36412973 gcaaaccgaaccgaaccgcacggttcagtctaaaagtcatccgaa 36412929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 69; Significance: 5e-31; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 8 - 99
Target Start/End: Original strand, 14549598 - 14549694
Alignment:
Q  8 agattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttttgt-----tgctgagatgcaaaccg 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||     |||||||||||||||||    
T  14549598 agattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttacggtttggtttggttcggatgctgagatgcaaaccg 14549694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 8 - 79
Target Start/End: Complemental strand, 36827505 - 36827434
Alignment:
Q  8 agattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttt 79  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36827505 agattaatcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttt 36827434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 8 - 79
Target Start/End: Original strand, 30392449 - 30392520
Alignment:
Q  8 agattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttt 79  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30392449 agattattgttgggctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttt 30392520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 8 - 79
Target Start/End: Complemental strand, 6200649 - 6200578
Alignment:
Q  8 agattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttt 79  Q
    |||||||||||| | ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  6200649 agattattcttgggttatgtaattgggctagtacatgtttcagtaatattcattattcttgcggtttggttt 6200578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 8 - 75
Target Start/End: Complemental strand, 18169739 - 18169672
Alignment:
Q  8 agattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttg 75  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  18169739 agattattcttgaggtatgtaattgggctagtacatgtttaagtaatattcattattcttgcagtttg 18169672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 8 - 75
Target Start/End: Complemental strand, 18633305 - 18633238
Alignment:
Q  8 agattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttg 75  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  18633305 agattattcttgaggtatgtaattgggctagtacatgtttaagtaatattcattattcttgcagtttg 18633238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 8 - 99
Target Start/End: Original strand, 3682288 - 3682384
Alignment:
Q  8 agattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttt-----tgttgctgagatgcaaaccg 99  Q
    |||||||||||  | |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||      |||||||||||||||||||    
T  3682288 agattattcttaggttatgtaattgggctagtacatgtttaggtaatattcattattcttgcggtttggtttggttcggttgctgagatgcaaaccg 3682384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 44673109 - 44673165
Alignment:
Q  23 tatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttt 79  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  44673109 tatgtaattgggctagtacatgtttaagtaatattcattattcttgcagtttggttt 44673165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 8 - 79
Target Start/End: Original strand, 10661518 - 10661589
Alignment:
Q  8 agattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttt 79  Q
    |||| |||||||||||||||||| |||||||||||||||||||  ||||||||||| |||||||||||||||    
T  10661518 agataattcttgagctatgtaatcgggctagtacatgtttaagatatattcattatccttgcggtttggttt 10661589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 8 - 79
Target Start/End: Original strand, 33068962 - 33069033
Alignment:
Q  8 agattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttt 79  Q
    |||||||||||||| |||||||||||||| |||||  ||||||||||||| |||||| ||| ||||||||||    
T  33068962 agattattcttgagttatgtaattgggctggtacaaatttaagtaatattgattatttttgtggtttggttt 33069033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 68; Significance: 2e-30; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 8 - 79
Target Start/End: Complemental strand, 13801690 - 13801619
Alignment:
Q  8 agattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttt 79  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  13801690 agattattcttgagctatgtaattgggctagtacatatttaagtaatattcattattcttgcggtttggttt 13801619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 8 - 79
Target Start/End: Original strand, 33550693 - 33550764
Alignment:
Q  8 agattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttt 79  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33550693 agattattcttgggctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttt 33550764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 8 - 79
Target Start/End: Original strand, 15860097 - 15860168
Alignment:
Q  8 agattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttt 79  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  15860097 agattattcttgagctatgtaattgggctagtacatgtttaattaatattcattattcttgcagtttggttt 15860168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 8 - 79
Target Start/End: Complemental strand, 35039651 - 35039580
Alignment:
Q  8 agattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttt 79  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  35039651 agattattcttgggctatgtaattgggctagtacatgtttaagtaacattcattattcttgcggtttggttt 35039580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 10591210 - 10591273
Alignment:
Q  10 attattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtt 73  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  10591210 attattcttgagctatgtaattgggctattacatgtttaagtaatattcattattcttgcggtt 10591273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 25137514 - 25137584
Alignment:
Q  8 agattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtt 78  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||    
T  25137514 agattattcttgggctatgtaattgggatagtacatgtttaagtaatattcattattattgtggtttggtt 25137584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 68; Significance: 2e-30; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 8 - 79
Target Start/End: Complemental strand, 24910766 - 24910695
Alignment:
Q  8 agattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttt 79  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  24910766 agattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttccggtttggttt 24910695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 8 - 99
Target Start/End: Complemental strand, 51252133 - 51252042
Alignment:
Q  8 agattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttttgttgctgagatgcaaaccg 99  Q
    |||||||| ||  ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  51252133 agattattatttggctatgtaattaggctagtacatgtttaagtaatattcattattcttgcgggttggtttggttgctgagatgcaaaccg 51252042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 8 - 79
Target Start/End: Original strand, 11899409 - 11899480
Alignment:
Q  8 agattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttt 79  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  11899409 agattattcttgagctatgtaattgagctagtacatatttaagtaatattcattattcttgcggtttggttt 11899480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 8 - 79
Target Start/End: Complemental strand, 39256348 - 39256277
Alignment:
Q  8 agattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttt 79  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  39256348 agattattcgtgagctatgtaatttggctagtacatgtttaagtaatattcattattcttgcggtttggttt 39256277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 44918911 - 44918981
Alignment:
Q  8 agattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtt 78  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  44918911 agattattcttgagctatgtaattggactagtacatgtttaagtaatattcattattcttgcggtctggtt 44918981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 8 - 79
Target Start/End: Complemental strand, 16529204 - 16529133
Alignment:
Q  8 agattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttt 79  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  16529204 agattattcttgggctatgtaattgggctattacatgtttaagtaatattcactattcttgcggtttggttt 16529133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 8 - 79
Target Start/End: Original strand, 33474811 - 33474882
Alignment:
Q  8 agattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttt 79  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| |||||||||    
T  33474811 agattattcttgagctatgtaattgggctagtacatatttaagtaatattcgttattcttgcagtttggttt 33474882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 8 - 79
Target Start/End: Complemental strand, 33910489 - 33910418
Alignment:
Q  8 agattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttt 79  Q
    ||||||||||| || ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  33910489 agattattcttaagttatgtaattgggctagtacatatttaagtaatattcattattcttgcggtttggttt 33910418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 10 - 99
Target Start/End: Original strand, 32954451 - 32954545
Alignment:
Q  10 attattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttt-----tgttgctgagatgcaaaccg 99  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||      |||||||||||||||||||    
T  32954451 attattcttgagctatgtaattgggcttgtacatgtttaagtaatattcattattcttatggtttggtttggttcggttgctgagatgcaaaccg 32954545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 99
Target Start/End: Complemental strand, 6722530 - 6722434
Alignment:
Q  7 tagattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttt-----tgttgctgagatgcaaaccg 99  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||      |||||||||||||||||||    
T  6722530 tagattattcttgagctatgtaattgggtcagtacatgtttaagtaatattcatta-tcttgcggtttggtttggttcggttgctgagatgcaaaccg 6722434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 8 - 99
Target Start/End: Original strand, 45692166 - 45692262
Alignment:
Q  8 agattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcgg-----tttggttttgttgctgagatgcaaaccg 99  Q
    |||||||||||||| ||||||||||| ||||||||| ||||||||||||| |||||||||||||     |||||||  |||||||||||||||||||    
T  45692166 agattattcttgagttatgtaattggactagtacatatttaagtaatatttattattcttgcggtttgttttggttcggttgctgagatgcaaaccg 45692262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 146
Target Start/End: Original strand, 8211687 - 8211741
Alignment:
Q  92 gcaaaccgaaccgaatcgcacgattcaatgtaaaagtcatccgaatcaagtgcgg 146  Q
    ||||||||||||||| ||| || |||| | ||||||||||||||| |||||||||    
T  8211687 gcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaaccaagtgcgg 8211741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 99
Target Start/End: Original strand, 29390096 - 29390150
Alignment:
Q  45 tttaagtaatattcattattcttgcggtttggttttgttgctgagatgcaaaccg 99  Q
    ||||||||||||| ||||||| ||||||||| |||  ||| ||||||||||||||    
T  29390096 tttaagtaatatttattattcgtgcggtttgatttgattgttgagatgcaaaccg 29390150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 40
Target Start/End: Complemental strand, 1160730 - 1160698
Alignment:
Q  8 agattattcttgagctatgtaattgggctagta 40  Q
    |||||||||||||||||||||||| ||||||||    
T  1160730 agattattcttgagctatgtaatttggctagta 1160698  T

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Target: scaffold0029 (Bit Score: 62; Significance: 7e-27; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 10 - 79
Target Start/End: Complemental strand, 40285 - 40216
Alignment:
Q  10 attattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttt 79  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  40285 attattcttgagctatgtaattgggctagtagatgtttaagtaatattcattattcttgtggtttggttt 40216  T

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Target: scaffold0029; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 10 - 79
Target Start/End: Complemental strand, 47481 - 47412
Alignment:
Q  10 attattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttt 79  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  47481 attattcttgagctatgtaattgggctagtagatgtttaagtaatattcattattcttgtggtttggttt 47412  T

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Target: scaffold0013 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 8 - 79
Target Start/End: Original strand, 129012 - 129083
Alignment:
Q  8 agattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggttt 79  Q
    |||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  129012 agattattattgggctatgtaattaggctagtacatgtttaagtaatattcattattcttgcgggttggttt 129083  T

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Target: scaffold0013; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 21 - 78
Target Start/End: Original strand, 106418 - 106475
Alignment:
Q  21 gctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtt 78  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  106418 gctatgtaattaggctagtacatgtttaagtaatattcattattcttgcgggttggtt 106475  T

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Target: scaffold0059 (Bit Score: 52; Significance: 7e-21; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 8 - 71
Target Start/End: Complemental strand, 69248 - 69185
Alignment:
Q  8 agattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcgg 71  Q
    |||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  69248 agattattattgggctatgtaattaggctagtacatgtttaagtaatattcattattcttgcgg 69185  T

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Target: scaffold0059; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 77353 - 77291
Alignment:
Q  9 gattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcgg 71  Q
    ||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  77353 gattattattgggctatgtaattaggctagtacatgtttaagtaatattcattattcttgcgg 77291  T

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