View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF20179_high_2 (Length: 772)
Name: NF20179_high_2
Description: NF20179
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20179_high_2 |
 |  |
|
Alignment Details
Target: chr6 (Bit Score: 653; Significance: 0; HSPs: 6)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 653; E-Value: 0
Query Start/End: Original strand, 6 - 752
Target Start/End: Original strand, 5920711 - 5921456
Alignment:
| Q |
6 |
gaggaggagcagagatgctaatagaaacaaaaggagtgacttggacatggttggtggtggcatttgaagtagaagggagagatgatgaggaaaccaaact |
105 |
Q |
| |
|
|||||| ||||||||||||| |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5920711 |
gaggagtagcagagatgctagtagaaacaaaaggagtgacttggatatggttggtggtggaatttgaagtagaagggagagatgatgaggaaaccaaact |
5920810 |
T |
 |
| Q |
106 |
agcatgttgtagcaa-ggaaacaagttgagtatattgctctggagacaaacaagtaccagaacctgtagagccccccaaaccatgatccaatgcaccatt |
204 |
Q |
| |
|
|| ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5920811 |
tgcctgttgtagcaaaggaaacaagttgagtatattgctctggagacaaacaggtaccagaacctgtagagccccccaaaccatgatccaatgcaccatt |
5920910 |
T |
 |
| Q |
205 |
ttcatcaaggatctcatgagtagctgcatttactctagattgttgcttaggaaaactagggtggccatgtttttgataacaaaaatcaactgtgtgatta |
304 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| |
|
|
| T |
5920911 |
ttcatcaaggatctcatgagtagctgcatttcctcttgattgttgcttaggaaaactagggtagccatgtttttgataacaaaaatcaattgtgtgatta |
5921010 |
T |
 |
| Q |
305 |
gtcttgtgacaaaaggtgcaatacctagtaggtttttgagaatgaacaaaagagaacctttaccacgtccttgtgatttcttaacctcagaagcattcaa |
404 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
5921011 |
gtcttgtgacaaaaggtgcaatacgtagtaggtttttgagaatgaacaaaaga--acctttaccacgtccttgtgatttcttaacctcataagcattcaa |
5921108 |
T |
 |
| Q |
405 |
ttgtatgttactatcatctgaagcagagactgaaattggtaaagaattattgctttcttcttgcaccacaagagagtaaaccttcttgagaggaggaaga |
504 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
5921109 |
ttgtatgttactatcatctgaagcagtgactgaaattggtaaagaattattgttttcttcttgcaccacaagagagtaaaccttcttgagcggaggaaga |
5921208 |
T |
 |
| Q |
505 |
ggatcaagaagaagaacttgagtcttaacaaccccaaaattatcattcaaactagtcaaaaactgcatgatttgatcctcagttctgtaaatcttagcaa |
604 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5921209 |
ggatcaagaagaagaacttgagtcttaacaaccccaaaattatcattcaaaccagtcaaaaactgcatgatttgatcctcagttctgtaaatcttagcaa |
5921308 |
T |
 |
| Q |
605 |
ccctagtagcatcacaatggcaagcatgaacacaaatacaagatggaattggtctatgtggtgaaagttcttcccataacgctttcaattcagtaaaata |
704 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5921309 |
ccctagtagcatcacaacggcaagcatgaacacaaatacaagatggaattggtctatgtgatgaaagttcttcccataacgctttcaattcagtaaaata |
5921408 |
T |
 |
| Q |
705 |
ctcaagaacatattttgcaccttgtttcaaattgttaatagaagaacg |
752 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5921409 |
ctcaagaacatattttgcaccttgtttcaaattgttaatagaagaacg |
5921456 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 472 - 719
Target Start/End: Complemental strand, 26968443 - 26968195
Alignment:
| Q |
472 |
acaagagagtaaaccttcttgagaggaggaagaggatcaagaagaagaacttgagtcttaacaaccccaaaatta-tcattcaaactagtcaaaaactgc |
570 |
Q |
| |
|
|||||||||||||| || ||||||| ||||| ||||||||| | | |||||||||||| | | |||||| |||||||||| ||||| ||| ||| |
|
|
| T |
26968443 |
acaagagagtaaactttattgagagaaggaataggatcaagtaacatgacttgagtcttatctatggtaaaattggtcattcaaaccagtcagaaattgc |
26968344 |
T |
 |
| Q |
571 |
atgatttgatcctcagttctgtaaatcttagcaaccctagtagcatcacaatggcaagcatgaacacaaatacaagatggaattggtctatgtggtgaaa |
670 |
Q |
| |
|
|| ||||| || ||| |||| || | ||||||||| ||||| || |||||| | |||| ||||||||| | ||||| ||||| |||||||||| |||| |
|
|
| T |
26968343 |
ataatttggtcttcatttctatacaccttagcaactctagttgcttcacaacgacaaggatgaacacatacacaagtaggaataggtctatgtgaagaaa |
26968244 |
T |
 |
| Q |
671 |
gttcttcccataacgctttcaattcagtaaaatactcaagaacatattt |
719 |
Q |
| |
|
|||| | |||||| ||||| ||||||||||| ||||||||| |||| |
|
|
| T |
26968243 |
gttcctaccataaactcttcaactcagtaaaatattcaagaacagattt |
26968195 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 498 - 737
Target Start/End: Complemental strand, 14813625 - 14813386
Alignment:
| Q |
498 |
aggaagaggatcaagaagaagaacttgagtcttaacaaccccaaaattatcattcaaactagtcaaaaactgcatgatttgatcctcagttctgtaaatc |
597 |
Q |
| |
|
||||||||||||||| |||||||||||||| ||||||| ||| | ||||||||| | || | ||| ||||| || ||||||||| |||| | |||| |
|
|
| T |
14813625 |
aggaagaggatcaaggagaagaacttgagttctaacaacagaaaattgatcattcaatcctgtaagaaattgcataatctgatcctcatttctatgaatc |
14813526 |
T |
 |
| Q |
598 |
ttagcaaccctagtagcatcacaatggcaagcatgaacacaaatacaagatggaattggtctatgtggtgaaagttcttcccataacgctttcaattcag |
697 |
Q |
| |
|
|||||||| ||| ||| ||||| | |||| |||||||||| |||| || || |||||||||| || | ||| |||||||| | |||| ||||| |
|
|
| T |
14813525 |
ttagcaactttagatgcagcacaacgacaaggatgaacacaagaacaattagggataggtctatgtgaagataattcctcccataaggacttcatttcag |
14813426 |
T |
 |
| Q |
698 |
taaaatactcaagaacatattttgcaccttgtttcaaatt |
737 |
Q |
| |
|
| ||||| || | |||| |||||| |||||||||||||| |
|
|
| T |
14813425 |
tgaaataatccaaaacagattttgatccttgtttcaaatt |
14813386 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 98 - 155
Target Start/End: Complemental strand, 26968778 - 26968721
Alignment:
| Q |
98 |
accaaactagcatgttgtagcaaggaaacaagttgagtatattgctctggagacaaac |
155 |
Q |
| |
|
||||||||||| ||||||||||||||||| ||||||| |||||||||| |||| |||| |
|
|
| T |
26968778 |
accaaactagcctgttgtagcaaggaaactagttgagcatattgctcttgagataaac |
26968721 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 269 - 324
Target Start/End: Complemental strand, 17118969 - 17118914
Alignment:
| Q |
269 |
ccatgtttttgataacaaaaatcaactgtgtgattagtcttgtgacaaaaggtgca |
324 |
Q |
| |
|
|||||||||||||||||||||||||| || |||||| |||||| | |||| ||||| |
|
|
| T |
17118969 |
ccatgtttttgataacaaaaatcaacagtatgattattcttgttaaaaaatgtgca |
17118914 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 450 - 536
Target Start/End: Complemental strand, 6341059 - 6340973
Alignment:
| Q |
450 |
attattgctttcttcttgcaccacaagagagtaaaccttcttgagaggaggaagaggatcaagaagaagaacttgagtcttaacaac |
536 |
Q |
| |
|
|||||| ||||||||||| || || | ||| |||||||| |||| | |||||| ||||| | |||||||||||||||||| ||||| |
|
|
| T |
6341059 |
attattactttcttcttgaacaaccatagaataaaccttgttgattgaaggaagtggatccataagaagaacttgagtcttcacaac |
6340973 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 498; Significance: 0; HSPs: 4)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 498; E-Value: 0
Query Start/End: Original strand, 5 - 752
Target Start/End: Original strand, 20325019 - 20325758
Alignment:
| Q |
5 |
tgaggaggagcagagatgctaatagaaacaaaaggagtgacttggacatggttggtggtggcatttgaagtagaagggagagatgatgaggaaaccaaac |
104 |
Q |
| |
|
||||||| |||||| ||| || | ||||||||||||||| ||||||||| |||||||| ||||||||||||| ||| ||||||||||||||| ||||| |
|
|
| T |
20325019 |
tgaggagaagcagaaatgttattggaaacaaaaggagtggtttggacatgattggtggtagcatttgaagtaggaggaggagatgatgaggaaatcaaac |
20325118 |
T |
 |
| Q |
105 |
tagcatgttgtagcaaggaaacaagttgagtatattgctctggagacaaacaagtaccagaacctgtagagccccccaaaccatgatccaatgcaccatt |
204 |
Q |
| |
|
|||| || || |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20325119 |
tagcctgctgcagcaaggaaacaagttgagtatattgctctggagacaaactagtaccagaacctgtagagccccccaaaccatgatccaatgcaccatt |
20325218 |
T |
 |
| Q |
205 |
ttcatcaaggatctcatgagtagctgcatttactctagattgttgcttaggaaaactagggtggccatgtttttgataacaaaaatcaactgtgtgatta |
304 |
Q |
| |
|
||||||| |||||||||||| ||| | | ||| ||||||||||||||||||||||||| || |||||| |||||||||||||||||||||||||||| |
|
|
| T |
20325219 |
ttcatcagggatctcatgagaagcag---tcactttagattgttgcttaggaaaactaggatgaccatgtagttgataacaaaaatcaactgtgtgatta |
20325315 |
T |
 |
| Q |
305 |
gtcttgtgacaaaaggtgcaatacctagtaggtttttgagaatgaacaaaagagaacctttaccacgtccttgtgatttcttaacctcagaagcattcaa |
404 |
Q |
| |
|
|| ||||||||||| ||||| |||||| ||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
20325316 |
gttttgtgacaaaaagtgcagtacctattaggtttttgagaattaacaaaa-----cctttaccacgtccttgggatttcttaacctcagaagcattcaa |
20325410 |
T |
 |
| Q |
405 |
ttgtatgttactatcatctgaagcagagactgaaattggtaaagaattattgctttcttcttgcaccacaagagagtaaaccttcttgagaggaggaaga |
504 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||| || || ||||| |||||| |
|
|
| T |
20325411 |
ttgtatgttactatcatctgaagcagagattgaaattggtaaagagttattgctttcttcttgcaccacaagagaataaactttattaagaggtggaaga |
20325510 |
T |
 |
| Q |
505 |
ggatcaagaagaagaacttgagtcttaacaaccccaaaattatcattcaaactagtcaaaaactgcatgatttgatcctcagttctgtaaatcttagcaa |
604 |
Q |
| |
|
|||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| | |
|
|
| T |
20325511 |
ggattaagaagaagaacttgagtcttaacaactccaaaattatcattcaaaccagtcaaaaactgcataatttgatcctcagttctgtaaatcttagcca |
20325610 |
T |
 |
| Q |
605 |
ccctagtagcatcacaatggcaagcatgaacacaaatacaagatggaattggtctatgtggtgaaagttcttcccataacgctttcaattcagtaaaata |
704 |
Q |
| |
|
||||||||||||||||| |||||||||||||||| | |||||||||||| |||||||||| |||||||||||||||||| | |||||||||||||||||| |
|
|
| T |
20325611 |
ccctagtagcatcacaacggcaagcatgaacacacacacaagatggaataggtctatgtgatgaaagttcttcccataaagatttcaattcagtaaaata |
20325710 |
T |
 |
| Q |
705 |
ctcaagaacatattttgcaccttgtttcaaattgttaatagaagaacg |
752 |
Q |
| |
|
|||||||||| ||||||||||||||||||| |||||||| |||||||| |
|
|
| T |
20325711 |
ctcaagaacagattttgcaccttgtttcaagttgttaatggaagaacg |
20325758 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 669 - 753
Target Start/End: Complemental strand, 15447400 - 15447316
Alignment:
| Q |
669 |
aagttcttcccataacgctttcaattcagtaaaatactcaagaacatattttgcaccttgtttcaaattgttaatagaagaacgt |
753 |
Q |
| |
|
||||||||||||||| |||||||| ||||| |||||||| | |||| || ||| ||||||||| | ||||||||| || |||||| |
|
|
| T |
15447400 |
aagttcttcccataaagctttcaactcagtgaaatactccaaaacaaatattgaaccttgtttgagattgttaatggaggaacgt |
15447316 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 446 - 605
Target Start/End: Complemental strand, 11923141 - 11922982
Alignment:
| Q |
446 |
aagaattattgctttcttcttgcaccacaagagagtaaaccttcttgagaggaggaagaggatcaagaagaagaacttgagtcttaacaaccccaaaatt |
545 |
Q |
| |
|
|||| |||||||||||||||| || ||||| |||||||||| || || | ||||| |||||||||||| | ||||||||| || | || ||| | |
|
|
| T |
11923141 |
aagagttattgctttcttcttaaacaacaaggaagtaaaccttgttcagggaaggaataggatcaagaagcaaaacttgagtttttaatacagaaaattg |
11923042 |
T |
 |
| Q |
546 |
atcattcaaactagtcaaaaactgcatgatttgatcctcagttctgtaaatcttagcaac |
605 |
Q |
| |
|
||||||||| | |||| ||| |||||||||||||| | |||| |||||||||| ||||| |
|
|
| T |
11923041 |
atcattcaagcctgtcagaaattgcatgatttgatctttagttatgtaaatcttggcaac |
11922982 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 450 - 536
Target Start/End: Original strand, 16992268 - 16992354
Alignment:
| Q |
450 |
attattgctttcttcttgcaccacaagagagtaaaccttcttgagaggaggaagaggatcaagaagaagaacttgagtcttaacaac |
536 |
Q |
| |
|
|||||| ||||||||||| || || | ||| |||||||| |||| | |||||| ||||| | |||||||||||||||||| ||||| |
|
|
| T |
16992268 |
attattactttcttcttgaacaaccatagaataaaccttgttgattgaaggaagtggatccataagaagaacttgagtcttcacaac |
16992354 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 498 - 737
Target Start/End: Complemental strand, 10636949 - 10636710
Alignment:
| Q |
498 |
aggaagaggatcaagaagaagaacttgagtcttaacaaccccaaaattatcattcaaactagtcaaaaactgcatgatttgatcctcagttctgtaaatc |
597 |
Q |
| |
|
||||||||||||||| |||||||||||||| ||||||| ||| | |||||||| | || | ||| ||||| || ||||||||| |||| | |||| |
|
|
| T |
10636949 |
aggaagaggatcaaggagaagaacttgagttctaacaacagaaaattggtcattcaatcctgtaagaaattgcataatctgatcctcatttctatgaatc |
10636850 |
T |
 |
| Q |
598 |
ttagcaaccctagtagcatcacaatggcaagcatgaacacaaatacaagatggaattggtctatgtggtgaaagttcttcccataacgctttcaattcag |
697 |
Q |
| |
|
|||||||| |||| ||| ||||| | |||| |||||||||| |||| || || |||||||||| || | ||| |||||||| | |||| ||||| |
|
|
| T |
10636849 |
ttagcaactctagatgcagcacaacgacaaggatgaacacaagaacaattagggataggtctatgtgaagataattcctcccataaggacttcatttcag |
10636750 |
T |
 |
| Q |
698 |
taaaatactcaagaacatattttgcaccttgtttcaaatt |
737 |
Q |
| |
|
| ||||| || | |||| |||||| |||||||||||||| |
|
|
| T |
10636749 |
tgaaataatccaaaacagattttgatccttgtttcaaatt |
10636710 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 446 - 644
Target Start/End: Complemental strand, 22642215 - 22642017
Alignment:
| Q |
446 |
aagaattattgctttcttcttgcaccacaagagagtaaaccttcttgagaggaggaagaggatcaagaagaagaacttgagtcttaacaaccccaaaatt |
545 |
Q |
| |
|
||||||||||||| |||||||| | ||| | ||| |||||||| || | || ||| ||||||||||| | |||| |||||||| || || || | |
|
|
| T |
22642215 |
aagaattattgctctcttcttgaatcaccatagaataaaccttattcaaagaaggtagaggatcaagcaatagaatctgagtctttaccacagagaattg |
22642116 |
T |
 |
| Q |
546 |
atcattcaaactagtcaaaaactgcatgatttgatcctcagttctgtaaatcttagcaaccctagtagcatcacaatggcaagcatgaacacaaataca |
644 |
Q |
| |
|
||||||||| | ||| ||||| ||||| ||||||||||||||||| | | |||| ||||| | |||||| ||||| |||| | ||| ||||||||||| |
|
|
| T |
22642115 |
atcattcaagccagttaaaaattgcattatttgatcctcagttctatgagtcttggcaacacgagtagcttcacaccggcatggatgcacacaaataca |
22642017 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 498 - 639
Target Start/End: Complemental strand, 5238167 - 5238026
Alignment:
| Q |
498 |
aggaagaggatcaagaagaagaacttgagtcttaacaaccccaaaattatcattcaaactagtcaaaaactgcatgatttgatcctcagttctgtaaatc |
597 |
Q |
| |
|
||||||||||||||| |||||||||||||| ||||||| ||| | ||||||||| | || | ||| ||||| || ||||||||| |||| | |||| |
|
|
| T |
5238167 |
aggaagaggatcaaggagaagaacttgagttctaacaacagaaaattgatcattcaatcctgtaagaaattgcataatctgatcctcatttctatgaatc |
5238068 |
T |
 |
| Q |
598 |
ttagcaaccctagtagcatcacaatggcaagcatgaacacaa |
639 |
Q |
| |
|
|||||||| ||| ||| ||||| | |||| |||||||||| |
|
|
| T |
5238067 |
ttagcaactttagatgcagcacaacgacaaggatgaacacaa |
5238026 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 38; Significance: 0.000000000005; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 547 - 604
Target Start/End: Complemental strand, 25571683 - 25571626
Alignment:
| Q |
547 |
tcattcaaactagtcaaaaactgcatgatttgatcctcagttctgtaaatcttagcaa |
604 |
Q |
| |
|
|||||||||| |||||||||||| ||||||||||||| |||||||||| |||||||| |
|
|
| T |
25571683 |
tcattcaaaccagtcaaaaactgaatgatttgatccttggttctgtaaagcttagcaa |
25571626 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 32; Significance: 0.00000002; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 706 - 753
Target Start/End: Complemental strand, 13129185 - 13129138
Alignment:
| Q |
706 |
tcaagaacatattttgcaccttgtttcaaattgttaatagaagaacgt |
753 |
Q |
| |
|
||||||||| |||| |||||||||||||||||||||| ||||||||| |
|
|
| T |
13129185 |
tcaagaacagatttatcaccttgtttcaaattgttaatggaagaacgt |
13129138 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 450 - 536
Target Start/End: Original strand, 20485103 - 20485189
Alignment:
| Q |
450 |
attattgctttcttcttgcaccacaagagagtaaaccttcttgagaggaggaagaggatcaagaagaagaacttgagtcttaacaac |
536 |
Q |
| |
|
|||||| ||||||||||| || || | ||| |||||||| |||| | |||||| ||||| | |||||||||||||||||| ||||| |
|
|
| T |
20485103 |
attattactttcttcttgaacaaccatagaataaaccttgttgattgaaggaagtggatccataagaagaacttgagtcttcacaac |
20485189 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 450 - 536
Target Start/End: Complemental strand, 28016088 - 28016002
Alignment:
| Q |
450 |
attattgctttcttcttgcaccacaagagagtaaaccttcttgagaggaggaagaggatcaagaagaagaacttgagtcttaacaac |
536 |
Q |
| |
|
|||||| ||||||||||| || || | ||| |||||||| |||| | |||||| ||||| | |||||||||||||||||| ||||| |
|
|
| T |
28016088 |
attattactttcttcttgaacaaccatagaataaaccttgttgattgaaggaagtggatccataagaagaacttgagtcttcacaac |
28016002 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 269 - 318
Target Start/End: Complemental strand, 15756259 - 15756210
Alignment:
| Q |
269 |
ccatgtttttgataacaaaaatcaactgtgtgattagtcttgtgacaaaa |
318 |
Q |
| |
|
|||||||||||||| ||||| || | ||||||||||||||||||||||| |
|
|
| T |
15756259 |
ccatgtttttgatagcaaaattccaaagtgtgattagtcttgtgacaaaa |
15756210 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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