View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20179_high_92 (Length: 203)
Name: NF20179_high_92
Description: NF20179
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20179_high_92 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 165; Significance: 2e-88; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 35 - 203
Target Start/End: Original strand, 7072088 - 7072256
Alignment:
| Q |
35 |
gggtattttaaaatatttttccaatcctaatcgaatacccagttttcttttcaaatgtatactctgaacaatgctgcttttcatattttttcttctcatt |
134 |
Q |
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| T |
7072088 |
gggtattttaaaatatttttccaatcctaatcgaatacacagttttcttttcaaatgtatactctgaacaatgctgcttttcatattttttcttctcatt |
7072187 |
T |
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| Q |
135 |
attcctacattgatagtgatatatctaaccttataagtcaagcgacacagaatccaacaggatgatctc |
203 |
Q |
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| T |
7072188 |
attcctacattgatagtgatatatctaaccttataagtcaagcgacacagaatccaacaggatgatctc |
7072256 |
T |
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