View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2017_high_6 (Length: 240)
Name: NF2017_high_6
Description: NF2017
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2017_high_6 |
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Alignment Details
Target: chr1 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 44495105 - 44495323
Alignment:
| Q |
1 |
cttatagtttgttcaatgttgtctctcaattaagcattatgactgagtttggtaagtctaatttgcctcatagttcacatttgttttatttttggtgaat |
100 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
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| T |
44495105 |
cttataatttgttcaatgttgtctctcaattaagcattatgactgagtttggtaagtctaatttgcctcatagttcacatttgttttatttttggtaaat |
44495204 |
T |
|
| Q |
101 |
gccttaagtagtagttcaatttattaactagctatggtcatcaaacatatagttcatcattcattactttttgagagcaaaaagttagagggtgttcttg |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44495205 |
gccttaagtagtagttcaatttattaactagctatggtcatcaaacatacagtttatcattcattactttttgagagcaaaaagttagagggtgttcttg |
44495304 |
T |
|
| Q |
201 |
gagacatttatgggcatag |
219 |
Q |
| |
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||||||||||||||||||| |
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| T |
44495305 |
gagacatttatgggcatag |
44495323 |
T |
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