View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20180_low_9 (Length: 266)
Name: NF20180_low_9
Description: NF20180
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20180_low_9 |
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Alignment Details
Target: chr6 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 11 - 250
Target Start/End: Complemental strand, 219840 - 219601
Alignment:
| Q |
11 |
cataggttttggcattgatgttaaagtattcaaccttttctgataagcaatcactgccttcacaaactcctacacatttaatattccttaaaatcaaatt |
110 |
Q |
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| T |
219840 |
catacgttttggcactgatgttaaagtattcagccttttctgaaaagcaatcactgccttcacaaactcctacacatttaatattcctcaaaatcaaatt |
219741 |
T |
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| Q |
111 |
tcatctcaataagatccaatgtaattgcttatcagaaaattggaaagtctagattttaacattgaaatttgagctgtctaatctcgatccaatgactgcc |
210 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
219740 |
tcatctcaataagatccaatgtaattgcttatcagaaaattggaaagtctagattttaacattgaaatttgagctgtctaatctcgatccaatgactgcc |
219641 |
T |
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| Q |
211 |
tgcctacatactgactactgctcggatgtcggggaatatc |
250 |
Q |
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||||||||||| |||||||||||||||||||||||||||| |
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| T |
219640 |
tgcctacataccgactactgctcggatgtcggggaatatc |
219601 |
T |
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