View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20182_low_7 (Length: 256)
Name: NF20182_low_7
Description: NF20182
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20182_low_7 |
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Alignment Details
Target: chr4 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 29 - 231
Target Start/End: Original strand, 11043228 - 11043429
Alignment:
| Q |
29 |
cttaatatatataccgaaaaacacaacagtcttgaggcattgtataaaaacaaataaaaatagggtttcaagctctcttcatttaggagaagcttcccct |
128 |
Q |
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| T |
11043228 |
cttagtatatatactaaaaaacacaacagttctaagccattgtataaaaa--aataaaaatagggtttcaaactctcttcatttaggagaagcttcccct |
11043325 |
T |
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| Q |
129 |
ttagaagagttgtgcctactggttaaattttcacc-ttaaggattaaggtatattttttcttcctcttcactccagttttattcaacaaattttgatttc |
227 |
Q |
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| T |
11043326 |
tcagaagagttgtgcctactagttaaattttcacctttaaggattaaggtatattttttctccctcttcactccagttctattcaacaaattttgatttc |
11043425 |
T |
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| Q |
228 |
atta |
231 |
Q |
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|||| |
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| T |
11043426 |
atta |
11043429 |
T |
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