View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF20183_high_13 (Length: 423)
Name: NF20183_high_13
Description: NF20183
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20183_high_13 |
 |  |
|
| [»] scaffold1112 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr3 (Bit Score: 140; Significance: 3e-73; HSPs: 7)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 1715411 - 1715585
Alignment:
| Q |
1 |
taggactgttgatatgagtttataaagagatgacacttctcaccttatgaattgattttgtaaggatgggttagaccccaaaattttaacatgttgaaat |
100 |
Q |
| |
|
||||||| |||||||||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1715411 |
taggactcttgatatgagtttataaatagatgacacttctcatcttatgagctgattttgtaaggatgggttagaccccaaaattttaacatgttgaaat |
1715510 |
T |
 |
| Q |
101 |
tccacctttattgcggtcagggcatgaagagggtgtgttgtgaaaaactcaagtcccaaatcagagataaaatatt |
176 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
1715511 |
tccacctttattgcggtca-ggcatgaagagggtgtattgtgaaaaactcaagtcccacatcagagataaaatatt |
1715585 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 224 - 404
Target Start/End: Original strand, 1716488 - 1716668
Alignment:
| Q |
224 |
agtagaactattaagttttgaaataacataaattaaacagaca-gatattcaacttcatgtgggaaataaggagaacttatttttatctgctaatgtatt |
322 |
Q |
| |
|
||||||||||| ||||||||||||||| |||| ||||||| | || ||||||||||| ||| |||||||| ||||||||||||||||||||||||||| |
|
|
| T |
1716488 |
agtagaactat-aagttttgaaataacctaaagtaaacagttaagagtttcaacttcatatggaaaataaggtgaacttatttttatctgctaatgtatt |
1716586 |
T |
 |
| Q |
323 |
gaaatagagtcgttttgatgagcatggaactcaagtcaaacgagtggaagatgtcaagggtatactaccagatctacatatt |
404 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||| | ||||||||||||||| ||||| ||||||||||||| |
|
|
| T |
1716587 |
gaaatagagtcgttttgatgagcatagaactcaagtcaaacgagcgtaagatgtcaagggtacactactagatctacatatt |
1716668 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 30 - 77
Target Start/End: Original strand, 1715596 - 1715643
Alignment:
| Q |
30 |
atgacacttctcaccttatgaattgattttgtaaggatgggttagacc |
77 |
Q |
| |
|
|||||||| ||||||||||||| |||||||||||||||| |||||||| |
|
|
| T |
1715596 |
atgacactcctcaccttatgaactgattttgtaaggatgagttagacc |
1715643 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 35011686 - 35011764
Alignment:
| Q |
4 |
gactgttgatatgagtttataaagagatgacacttctcaccttatgaattgattttgtaaggatgggttagaccccaaa |
82 |
Q |
| |
|
|||| |||||| ||| |||||||||| |||||| ||||||||||||| | ||||||||||||| ||||| ||||||| |
|
|
| T |
35011686 |
gactcttgataagagattataaagaggagacactcctcaccttatgaaccggttttgtaaggatgagttaggccccaaa |
35011764 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 35011893 - 35011971
Alignment:
| Q |
4 |
gactgttgatatgagtttataaagagatgacacttctcaccttatgaattgattttgtaaggatgggttagaccccaaa |
82 |
Q |
| |
|
|||| |||||| |||||||||||||| | |||| ||||||||||||| | ||||||||||||| ||||| ||||||| |
|
|
| T |
35011893 |
gactcttgataagagtttataaagaggaggcactcctcaccttatgaaccggttttgtaaggatgagttaggccccaaa |
35011971 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 93
Target Start/End: Complemental strand, 44145196 - 44145108
Alignment:
| Q |
4 |
gactgttgatatgagtttataaagagatgacacttctcaccttatgaattgattttgtaaggatgggttagaccccaaaattttaacatg |
93 |
Q |
| |
|
|||| |||||| ||||||||||||| |||| | |||||||||| | ||| |||| |||||||| ||||||||| ||||||||||||| |
|
|
| T |
44145196 |
gactcttgataatagtttataaagaggagacaatactcaccttataagttggttttataaggatgatttagacccc-aaattttaacatg |
44145108 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 219 - 255
Target Start/End: Original strand, 1737973 - 1738009
Alignment:
| Q |
219 |
gagtaagtagaactattaagttttgaaataacataaa |
255 |
Q |
| |
|
|||| ||||||||||||||||||||||||||| |||| |
|
|
| T |
1737973 |
gagttagtagaactattaagttttgaaataacctaaa |
1738009 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 7)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 56511533 - 56511611
Alignment:
| Q |
4 |
gactgttgatatgagtttataaagagatgacacttctcaccttatgaattgattttgtaaggatgggttagaccccaaa |
82 |
Q |
| |
|
|||| |||||| |||||||||||||| | |||| ||||||||||||| ||||||||||||||| ||||| ||||||| |
|
|
| T |
56511533 |
gactcttgataagagtttataaagaggaggcactcctcaccttatgaaccgattttgtaaggatgagttaggccccaaa |
56511611 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 53863934 - 53864012
Alignment:
| Q |
4 |
gactgttgatatgagtttataaagagatgacacttctcaccttatgaattgattttgtaaggatgggttagaccccaaa |
82 |
Q |
| |
|
|||| |||||| ||||||||||||| |||||| ||||||||||||| | ||||||||||||| |||||||| |||| |
|
|
| T |
53863934 |
gacttttgataatagtttataaagaggagacactcctcaccttatgaaccggttttgtaaggatgagttagaccacaaa |
53864012 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 56511326 - 56511404
Alignment:
| Q |
4 |
gactgttgatatgagtttataaagagatgacacttctcaccttatgaattgattttgtaaggatgggttagaccccaaa |
82 |
Q |
| |
|
|||| |||||| |||||||||||||| | |||| ||||||||||||| | ||||||||||||| ||||| ||||||| |
|
|
| T |
56511326 |
gactcttgataagagtttataaagaggaggcactcctcaccttatgaaccggttttgtaaggatgagttaggccccaaa |
56511404 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 10390352 - 10390276
Alignment:
| Q |
22 |
ataaagagatgacacttctcaccttatgaattgattttgtaaggatgggttagaccccaaaattttaacatgttgaaa |
99 |
Q |
| |
|
||||||||| |||||| ||||||||||||| | ||||||||||||| ||||||| || |||||| |||| ||||||| |
|
|
| T |
10390352 |
ataaagagaagacactcctcaccttatgaactagttttgtaaggatgagttagactcc-aaatttcaacaagttgaaa |
10390276 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 39 - 82
Target Start/End: Complemental strand, 39910456 - 39910413
Alignment:
| Q |
39 |
ctcaccttatgaattgattttgtaaggatgggttagaccccaaa |
82 |
Q |
| |
|
|||||||||| ||| ||||||||||||||| ||||||||||||| |
|
|
| T |
39910456 |
ctcaccttataaatcgattttgtaaggatgagttagaccccaaa |
39910413 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 82
Target Start/End: Complemental strand, 10390537 - 10390472
Alignment:
| Q |
17 |
agtttataaagagatgacacttctcaccttatgaattgattttgtaaggatgggttagaccccaaa |
82 |
Q |
| |
|
||||||||||||| |||| | ||||||||||||| ||||||||||||| ||||||||||||| |
|
|
| T |
10390537 |
agtttataaagaggagacattcctcaccttatgaaccagttttgtaaggatgagttagaccccaaa |
10390472 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 20093361 - 20093430
Alignment:
| Q |
4 |
gactgttgatatgagtttataaagagatgacacttctcaccttatgaattgattttgtaaggatgggtta |
73 |
Q |
| |
|
|||| |||||| || |||||||||||| ||||||||||||||| ||| | ||||||||||||| |||| |
|
|
| T |
20093361 |
gactcttgataagaatttataaagagaatgcacttctcaccttataaatcggttttgtaaggatgagtta |
20093430 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 34; Significance: 0.0000000006; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 9 - 82
Target Start/End: Original strand, 7621928 - 7622001
Alignment:
| Q |
9 |
ttgatatgagtttataaagagatgacacttctcaccttatgaattgattttgtaaggatgggttagaccccaaa |
82 |
Q |
| |
|
|||||| ||||||||| |||| |||||| ||| |||||| | ||||||||||||||||| ||||| ||||||| |
|
|
| T |
7621928 |
ttgataagagtttatagagaggagacactcctctccttataagttgattttgtaaggatgagttaggccccaaa |
7622001 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 74
Target Start/End: Complemental strand, 16051329 - 16051260
Alignment:
| Q |
4 |
gactgttgatatgagtttataaagagatgacacttctcaccttatgaattgattttgtaaggatgggttag |
74 |
Q |
| |
|
|||| |||||| ||||||||| |||| |||||| |||||||||||||||| |||| |||||||| ||||| |
|
|
| T |
16051329 |
gactcttgataagagtttatatagaggagacactcctcaccttatgaattggtttt-taaggatgagttag |
16051260 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 32 - 82
Target Start/End: Original strand, 30066039 - 30066089
Alignment:
| Q |
32 |
gacacttctcaccttatgaattgattttgtaaggatgggttagaccccaaa |
82 |
Q |
| |
|
|||||| ||||||||||||| || ||||||||||||| ||||| ||||||| |
|
|
| T |
30066039 |
gacactcctcaccttatgaactggttttgtaaggatgagttaggccccaaa |
30066089 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 34; Significance: 0.0000000006; HSPs: 5)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 17 - 82
Target Start/End: Original strand, 26098384 - 26098449
Alignment:
| Q |
17 |
agtttataaagagatgacacttctcaccttatgaattgattttgtaaggatgggttagaccccaaa |
82 |
Q |
| |
|
||||||||||||| |||||| ||||||||||||| | ||||||||||||| ||||| ||||||| |
|
|
| T |
26098384 |
agtttataaagaggagacactcctcaccttatgaaccgcttttgtaaggatgagttaggccccaaa |
26098449 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 82
Target Start/End: Original strand, 25998859 - 25998924
Alignment:
| Q |
17 |
agtttataaagagatgacacttctcaccttatgaattgattttgtaaggatgggttagaccccaaa |
82 |
Q |
| |
|
||||||||||||| |||||| ||||||||||||| | ||||||||||||| |||| ||||||| |
|
|
| T |
25998859 |
agtttataaagaggagacactcctcaccttatgaaccgcttttgtaaggatgatttaggccccaaa |
25998924 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 82
Target Start/End: Original strand, 25999065 - 25999130
Alignment:
| Q |
17 |
agtttataaagagatgacacttctcaccttatgaattgattttgtaaggatgggttagaccccaaa |
82 |
Q |
| |
|
||||||||||||| |||||| ||||||||||||| | ||||||||| ||| ||||| ||||||| |
|
|
| T |
25999065 |
agtttataaagaggagacactcctcaccttatgaaccggttttgtaagaatgagttaggccccaaa |
25999130 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 82
Target Start/End: Original strand, 26098590 - 26098655
Alignment:
| Q |
17 |
agtttataaagagatgacacttctcaccttatgaattgattttgtaaggatgggttagaccccaaa |
82 |
Q |
| |
|
||||||||||||| |||||| ||||||||||||| | ||||||||| ||| ||||| ||||||| |
|
|
| T |
26098590 |
agtttataaagaggagacactcctcaccttatgaaccgcttttgtaagaatgagttaggccccaaa |
26098655 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 82
Target Start/End: Original strand, 26098796 - 26098861
Alignment:
| Q |
17 |
agtttataaagagatgacacttctcaccttatgaattgattttgtaaggatgggttagaccccaaa |
82 |
Q |
| |
|
||||||||||||| |||||| ||||||||||||| | ||||||||| ||| ||||| ||||||| |
|
|
| T |
26098796 |
agtttataaagaggagacactcctcaccttatgaaccggttttgtaagaatgagttaggccccaaa |
26098861 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 34; Significance: 0.0000000006; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 28119817 - 28119748
Alignment:
| Q |
4 |
gactgttgatatgagtttataaagagatgacacttctcaccttatgaattgattttgtaaggatgggtta |
73 |
Q |
| |
|
|||| |||||| |||||||||||||| | || |||||||||||||||| |||||||||||||| |||| |
|
|
| T |
28119817 |
gactcttgataagagtttataaagagtagccatttctcaccttatgaatctattttgtaaggatgagtta |
28119748 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 31499078 - 31499135
Alignment:
| Q |
16 |
gagtttataaagagatgacacttctcaccttatgaattgattttgtaaggatgggttaga |
75 |
Q |
| |
|
|||||||||||||||| ||||||| ||||||| |||||||| |||||||||| |||||| |
|
|
| T |
31499078 |
gagtttataaagagat--cacttcttaccttataaattgattctgtaaggatgagttaga |
31499135 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 77
Target Start/End: Complemental strand, 42844861 - 42844817
Alignment:
| Q |
33 |
acacttctcaccttatgaattgattttgtaaggatgggttagacc |
77 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||| |||||||| |
|
|
| T |
42844861 |
acacttctcaccttatgaactgattttgtaaggataagttagacc |
42844817 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 81
Target Start/End: Original strand, 2716373 - 2716449
Alignment:
| Q |
5 |
actgttgatatgagtttataaagagatgacacttctcaccttatgaattgattttgtaaggatgggttagaccccaa |
81 |
Q |
| |
|
|||||||||| ||||||||||||| |||||| |||||||||| | || ||||||||||||| ||||| |||||| |
|
|
| T |
2716373 |
actgttgataaaagtttataaagaggagacactcctcaccttataagctggttttgtaaggatgagttaggccccaa |
2716449 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 31; Significance: 0.00000004; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 43566005 - 43566070
Alignment:
| Q |
16 |
gagtttataaagagatgacacttctcaccttatgaattgattttgtaaggatgggttagaccccaaa |
82 |
Q |
| |
|
||||||||||| || ||||||| |||||||||| | ||||||||||| ||||||||||||||||| |
|
|
| T |
43566005 |
gagtttataaa-aggtgacactcctcaccttataagccgattttgtaagaatgggttagaccccaaa |
43566070 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 82
Target Start/End: Original strand, 33855733 - 33855798
Alignment:
| Q |
17 |
agtttataaagagatgacacttctcaccttatgaattgattttgtaaggatgggttagaccccaaa |
82 |
Q |
| |
|
||||||||||||| |||||| ||||||||||||| | ||||||||| ||| ||||| ||||||| |
|
|
| T |
33855733 |
agtttataaagaggagacactcctcaccttatgaaccggttttgtaagaatgagttaggccccaaa |
33855798 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 77
Target Start/End: Complemental strand, 38948476 - 38948416
Alignment:
| Q |
16 |
gagtttataaagagatgacacttctcaccttatgaattgattttgtaaggatgggttagacc |
77 |
Q |
| |
|
||||||||| |||| |||| |||||||||| |||||||||||| |||||||| |||||||| |
|
|
| T |
38948476 |
gagtttatatagaggagacaattctcaccttgtgaattgatttt-taaggatgagttagacc |
38948416 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 31; Significance: 0.00000004; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 91
Target Start/End: Complemental strand, 10849561 - 10849479
Alignment:
| Q |
9 |
ttgatatgagtttataaagagatgacacttctcaccttatgaattgattttgtaaggatgggttagaccccaaaattttaaca |
91 |
Q |
| |
|
|||||| |||||||||||||| | |||| ||||||||| | ||| ||||||||||||| ||||| ||||||| ||| |||| |
|
|
| T |
10849561 |
ttgataagagtttataaagaggaggcactcctcaccttacaagttggttttgtaaggatgagttaggccccaaattttcaaca |
10849479 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 26847320 - 26847275
Alignment:
| Q |
1 |
taggactgttgatatgagtttataaagagatgacacttctcacctta |
47 |
Q |
| |
|
||||||| |||||| ||||||||||||||| |||||||||||||||| |
|
|
| T |
26847320 |
taggactcttgataagagtttataaagaga-gacacttctcacctta |
26847275 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 43402599 - 43402659
Alignment:
| Q |
18 |
gtttataaagagatgacacttctcaccttatgaattgattttgtaaggatgggttagaccc |
78 |
Q |
| |
|
|||||||||||| |||||||||||| |||| ||| ||||||||||| ||| |||||||| |
|
|
| T |
43402599 |
gtttataaagagtagacacttctcacattataaatcgattttgtaagaatgaattagaccc |
43402659 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1112 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold1112
Description:
Target: scaffold1112; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 1310 - 1250
Alignment:
| Q |
4 |
gactgttgatatgagtttataaagagatgacacttctcaccttatgaattgattttgtaag |
64 |
Q |
| |
|
|||| |||||| ||||||||||||||| |||||| |||||||| || |||||||||||| |
|
|
| T |
1310 |
gactcttgataagagtttataaagagaagacactcatcaccttaaaaactgattttgtaag |
1250 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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