View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20183_high_32 (Length: 267)

Name: NF20183_high_32
Description: NF20183
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20183_high_32
NF20183_high_32
[»] chr6 (24 HSPs)
chr6 (3-114)||(16086497-16086607)
chr6 (3-114)||(16106996-16107106)
chr6 (3-111)||(31628672-31628779)
chr6 (3-114)||(18399419-18399530)
chr6 (180-249)||(18777474-18777543)
chr6 (180-249)||(32899135-32899204)
chr6 (180-249)||(16106861-16106930)
chr6 (180-249)||(18432987-18433056)
chr6 (3-114)||(18433122-18433231)
chr6 (3-114)||(18570761-18570872)
chr6 (180-249)||(16086362-16086431)
chr6 (180-249)||(25640395-25640463)
chr6 (3-114)||(18777610-18777720)
chr6 (195-249)||(18399283-18399337)
chr6 (72-114)||(32899271-32899313)
chr6 (57-113)||(22441412-22441469)
chr6 (195-235)||(31628549-31628589)
chr6 (8-100)||(35135673-35135765)
chr6 (195-249)||(13014557-13014610)
chr6 (195-249)||(15079559-15079613)
chr6 (195-249)||(22441278-22441331)
chr6 (8-113)||(33325174-33325279)
chr6 (196-249)||(18570623-18570675)
chr6 (57-114)||(25633445-25633500)
[»] chr8 (21 HSPs)
chr8 (3-114)||(20561286-20561397)
chr8 (3-114)||(20572848-20572959)
chr8 (3-113)||(41247136-41247245)
chr8 (3-114)||(20529508-20529619)
chr8 (180-249)||(20529686-20529755)
chr8 (3-114)||(25122920-25123029)
chr8 (4-114)||(20653690-20653799)
chr8 (181-249)||(25122786-25122853)
chr8 (180-249)||(37612013-37612081)
chr8 (180-249)||(20481948-20482016)
chr8 (10-114)||(21681485-21681589)
chr8 (3-114)||(19992716-19992824)
chr8 (195-249)||(20561479-20561533)
chr8 (195-249)||(20573040-20573094)
chr8 (195-249)||(20653881-20653935)
chr8 (182-249)||(41247002-41247068)
chr8 (180-249)||(22234639-22234707)
chr8 (195-249)||(21681349-21681403)
chr8 (61-114)||(20482082-20482134)
chr8 (57-113)||(22234517-22234571)
chr8 (195-249)||(19992906-19992959)
[»] chr3 (58 HSPs)
chr3 (3-114)||(13836099-13836210)
chr3 (3-114)||(50111707-50111817)
chr3 (3-114)||(54424492-54424601)
chr3 (180-249)||(6146602-6146671)
chr3 (180-249)||(17100997-17101066)
chr3 (180-249)||(17101682-17101751)
chr3 (3-114)||(6146427-6146536)
chr3 (27-114)||(30207699-30207785)
chr3 (180-249)||(54424357-54424426)
chr3 (3-114)||(6153989-6154098)
chr3 (180-242)||(13835973-13836035)
chr3 (180-249)||(6154164-6154233)
chr3 (180-249)||(30207563-30207632)
chr3 (3-114)||(16181606-16181714)
chr3 (4-113)||(14304528-14304634)
chr3 (195-249)||(50111899-50111953)
chr3 (180-249)||(317344-317412)
chr3 (180-249)||(34439176-34439244)
chr3 (7-112)||(40939609-40939714)
chr3 (6-114)||(17522548-17522656)
chr3 (3-114)||(17101817-17101925)
chr3 (3-114)||(35124178-35124287)
chr3 (195-249)||(14298766-14298820)
chr3 (195-249)||(14304393-14304447)
chr3 (4-114)||(17101132-17101239)
chr3 (4-114)||(55440515-55440625)
chr3 (180-249)||(38528072-38528140)
chr3 (3-114)||(16995719-16995827)
chr3 (195-249)||(14527928-14527982)
chr3 (195-249)||(35124040-35124094)
chr3 (3-113)||(38528208-38528315)
chr3 (3-113)||(53898250-53898358)
chr3 (196-249)||(12349388-12349441)
chr3 (180-249)||(16995895-16995963)
chr3 (180-249)||(22144106-22144174)
chr3 (3-114)||(12348927-12349037)
chr3 (60-113)||(13817990-13818044)
chr3 (6-114)||(14527738-14527847)
chr3 (195-249)||(17522738-17522792)
chr3 (57-114)||(34439051-34439109)
chr3 (195-249)||(40939471-40939525)
chr3 (195-249)||(55440706-55440760)
chr3 (6-114)||(14295918-14296026)
chr3 (6-114)||(14301545-14301653)
chr3 (60-113)||(17939046-17939099)
chr3 (57-113)||(19570401-19570458)
chr3 (197-249)||(13817855-13817906)
chr3 (195-249)||(3578433-3578487)
chr3 (60-113)||(8632269-8632323)
chr3 (195-249)||(11060855-11060909)
chr3 (195-249)||(16181796-16181849)
chr3 (3-114)||(22143930-22144038)
chr3 (195-249)||(14295783-14295837)
chr3 (195-249)||(14301410-14301464)
chr3 (57-114)||(317221-317276)
chr3 (4-113)||(3578567-3578676)
chr3 (8-100)||(12487439-12487531)
chr3 (197-249)||(19570542-19570593)
[»] scaffold0034 (4 HSPs)
scaffold0034 (3-114)||(41139-41249)
scaffold0034 (3-114)||(46646-46756)
scaffold0034 (180-249)||(41003-41072)
scaffold0034 (180-249)||(46510-46579)
[»] scaffold0396 (2 HSPs)
scaffold0396 (3-113)||(11365-11473)
scaffold0396 (196-245)||(11557-11606)
[»] chr4 (28 HSPs)
chr4 (4-114)||(45458512-45458622)
chr4 (3-102)||(21959121-21959219)
chr4 (3-114)||(20813205-20813314)
chr4 (3-114)||(30458386-30458495)
chr4 (180-249)||(21959297-21959366)
chr4 (5-114)||(30232153-30232261)
chr4 (180-249)||(30232329-30232398)
chr4 (180-249)||(819764-819833)
chr4 (180-249)||(20813380-20813449)
chr4 (180-249)||(34395602-34395671)
chr4 (180-249)||(45458689-45458758)
chr4 (3-102)||(819587-819685)
chr4 (3-114)||(12836858-12836967)
chr4 (4-114)||(16732652-16732762)
chr4 (180-249)||(44056259-44056328)
chr4 (180-249)||(12837035-12837103)
chr4 (196-249)||(23269783-23269836)
chr4 (3-114)||(44347305-44347413)
chr4 (5-113)||(8872132-8872240)
chr4 (180-239)||(8872307-8872366)
chr4 (3-111)||(34395744-34395849)
chr4 (3-114)||(18493983-18494093)
chr4 (199-249)||(30458248-30458297)
chr4 (3-114)||(44056395-44056505)
chr4 (195-249)||(16732513-16732567)
chr4 (195-249)||(52265356-52265410)
chr4 (60-113)||(53907422-53907476)
chr4 (60-93)||(53704458-53704491)
[»] chr2 (22 HSPs)
chr2 (4-114)||(27262285-27262395)
chr2 (3-114)||(17367299-17367409)
chr2 (3-114)||(36890341-36890451)
chr2 (4-113)||(4447790-4447900)
chr2 (6-114)||(25602506-25602615)
chr2 (180-249)||(36890519-36890588)
chr2 (195-249)||(28974393-28974447)
chr2 (195-249)||(271514-271568)
chr2 (3-113)||(271649-271757)
chr2 (180-249)||(25602370-25602439)
chr2 (180-239)||(17367174-17367232)
chr2 (197-249)||(27262149-27262201)
chr2 (195-249)||(4447981-4448035)
chr2 (195-249)||(22579711-22579765)
chr2 (4-114)||(24570950-24571058)
chr2 (195-249)||(25875770-25875823)
chr2 (195-247)||(24571141-24571193)
chr2 (6-114)||(28974528-28974636)
chr2 (8-113)||(31145839-31145944)
chr2 (60-113)||(42535088-42535142)
chr2 (57-114)||(25875635-25875690)
chr2 (8-100)||(22579523-22579615)
[»] scaffold0117 (2 HSPs)
scaffold0117 (5-100)||(11226-11321)
scaffold0117 (195-248)||(11417-11470)
[»] scaffold0001 (6 HSPs)
scaffold0001 (3-114)||(61287-61397)
scaffold0001 (192-249)||(70470-70527)
scaffold0001 (180-245)||(79723-79788)
scaffold0001 (180-249)||(61152-61221)
scaffold0001 (72-114)||(70349-70391)
scaffold0001 (3-114)||(79546-79656)
[»] chr7 (33 HSPs)
chr7 (3-114)||(3895503-3895613)
chr7 (3-113)||(45451824-45451934)
chr7 (180-249)||(26069441-26069510)
chr7 (180-249)||(26070099-26070168)
chr7 (180-249)||(26093886-26093955)
chr7 (4-114)||(11287897-11288007)
chr7 (3-114)||(44865709-44865818)
chr7 (180-249)||(143984-144052)
chr7 (42-114)||(12759468-12759541)
chr7 (180-249)||(13862766-13862835)
chr7 (33-114)||(15822119-15822199)
chr7 (180-249)||(15822266-15822334)
chr7 (180-249)||(47290127-47290196)
chr7 (3-114)||(12369496-12369606)
chr7 (3-114)||(47290263-47290372)
chr7 (195-249)||(12759333-12759387)
chr7 (180-249)||(12369673-12369742)
chr7 (195-249)||(11287761-11287815)
chr7 (195-249)||(45452016-45452070)
chr7 (3-114)||(26069264-26069373)
chr7 (3-114)||(26069922-26070031)
chr7 (3-114)||(26093709-26093818)
chr7 (195-249)||(44865575-44865628)
chr7 (6-114)||(16569665-16569773)
chr7 (6-114)||(16595889-16595997)
chr7 (195-249)||(12247968-12248022)
chr7 (196-249)||(3895369-3895421)
chr7 (57-113)||(35095294-35095351)
chr7 (78-114)||(12247850-12247886)
chr7 (195-249)||(16569854-16569908)
chr7 (195-249)||(16595754-16595808)
chr7 (60-113)||(39046343-39046397)
chr7 (57-113)||(144118-144172)
[»] chr1 (15 HSPs)
chr1 (3-114)||(21718708-21718819)
chr1 (3-114)||(35522006-35522118)
chr1 (3-113)||(49968130-49968240)
chr1 (180-249)||(35055101-35055170)
chr1 (3-114)||(22402766-22402877)
chr1 (180-249)||(22402943-22403012)
chr1 (3-114)||(27329420-27329531)
chr1 (180-249)||(20346369-20346437)
chr1 (180-249)||(49967995-49968063)
chr1 (192-249)||(27329611-27329668)
chr1 (57-114)||(35055236-35055292)
chr1 (60-113)||(9783778-9783832)
chr1 (195-249)||(35522200-35522254)
chr1 (57-114)||(41212498-41212556)
chr1 (3-114)||(20346505-20346612)
[»] scaffold0008 (2 HSPs)
scaffold0008 (4-114)||(23171-23279)
scaffold0008 (180-249)||(23036-23105)
[»] scaffold0183 (2 HSPs)
scaffold0183 (3-99)||(5336-5431)
scaffold0183 (180-245)||(5510-5575)
[»] scaffold0359 (4 HSPs)
scaffold0359 (3-114)||(1795-1905)
scaffold0359 (180-246)||(1663-1729)
scaffold0359 (3-99)||(11312-11407)
scaffold0359 (197-249)||(11504-11555)
[»] scaffold0044 (2 HSPs)
scaffold0044 (180-249)||(38643-38712)
scaffold0044 (57-114)||(38779-38834)
[»] chr5 (23 HSPs)
chr5 (29-102)||(21907190-21907263)
chr5 (4-113)||(24182791-24182900)
chr5 (3-114)||(20712555-20712665)
chr5 (3-114)||(21397572-21397681)
chr5 (180-249)||(20712421-20712490)
chr5 (4-114)||(11336842-11336951)
chr5 (180-249)||(21397437-21397506)
chr5 (180-249)||(21646575-21646643)
chr5 (180-249)||(1168039-1168107)
chr5 (180-249)||(21907043-21907112)
chr5 (7-114)||(21646403-21646507)
chr5 (3-114)||(22662336-22662448)
chr5 (195-249)||(22662530-22662584)
chr5 (195-249)||(23466780-23466834)
chr5 (195-249)||(24182980-24183034)
chr5 (30-114)||(19406019-19406103)
chr5 (3-114)||(1167863-1167971)
chr5 (195-249)||(19405884-19405938)
chr5 (196-249)||(4865606-4865658)
chr5 (3-114)||(4865738-4865849)
chr5 (195-249)||(11337034-11337088)
chr5 (195-249)||(28261860-28261913)
chr5 (57-114)||(28261995-28262050)
[»] scaffold0103 (2 HSPs)
scaffold0103 (4-114)||(34144-34255)
scaffold0103 (197-249)||(34007-34059)
[»] scaffold0037 (2 HSPs)
scaffold0037 (3-113)||(24383-24493)
scaffold0037 (180-249)||(24561-24630)
[»] scaffold0338 (2 HSPs)
scaffold0338 (4-114)||(9467-9577)
scaffold0338 (196-249)||(9332-9385)
[»] scaffold0068 (4 HSPs)
scaffold0068 (180-249)||(48489-48557)
scaffold0068 (180-249)||(61937-62005)
scaffold0068 (3-114)||(48623-48731)
scaffold0068 (3-114)||(62071-62179)
[»] scaffold0011 (4 HSPs)
scaffold0011 (180-249)||(254649-254717)
scaffold0011 (180-249)||(261255-261323)
scaffold0011 (33-114)||(254502-254581)
scaffold0011 (33-114)||(261108-261187)
[»] scaffold0740 (2 HSPs)
scaffold0740 (3-114)||(4763-4871)
scaffold0740 (195-249)||(4628-4681)
[»] scaffold0673 (3 HSPs)
scaffold0673 (180-247)||(6681-6748)
scaffold0673 (180-249)||(656-724)
scaffold0673 (3-114)||(6505-6614)
[»] scaffold0240 (2 HSPs)
scaffold0240 (3-114)||(8051-8160)
scaffold0240 (180-249)||(7915-7983)
[»] scaffold0021 (9 HSPs)
scaffold0021 (182-249)||(132084-132151)
scaffold0021 (180-249)||(88620-88689)
scaffold0021 (195-249)||(16246-16300)
scaffold0021 (195-249)||(25777-25831)
scaffold0021 (192-249)||(12034-12091)
scaffold0021 (6-114)||(16380-16488)
scaffold0021 (6-114)||(25911-26019)
scaffold0021 (57-114)||(131961-132016)
scaffold0021 (6-110)||(12537-12641)
[»] scaffold0447 (4 HSPs)
scaffold0447 (180-249)||(4906-4974)
scaffold0447 (180-249)||(9520-9588)
scaffold0447 (57-113)||(5041-5097)
scaffold0447 (57-113)||(9655-9711)
[»] scaffold0383 (2 HSPs)
scaffold0383 (180-249)||(7515-7583)
scaffold0383 (57-113)||(7650-7706)
[»] scaffold0190 (1 HSPs)
scaffold0190 (5-114)||(10417-10525)
[»] scaffold0031 (4 HSPs)
scaffold0031 (6-114)||(31526-31634)
scaffold0031 (195-249)||(70957-71011)
scaffold0031 (195-249)||(31390-31444)
scaffold0031 (3-114)||(71095-71204)
[»] scaffold0480 (4 HSPs)
scaffold0480 (3-114)||(4907-5015)
scaffold0480 (195-249)||(5097-5150)
scaffold0480 (195-249)||(8729-8783)
scaffold0480 (8-114)||(8543-8649)
[»] scaffold0014 (4 HSPs)
scaffold0014 (4-114)||(85811-85922)
scaffold0014 (195-249)||(159644-159698)
scaffold0014 (201-249)||(85676-85724)
scaffold0014 (6-110)||(159785-159889)
[»] scaffold0035 (4 HSPs)
scaffold0035 (3-113)||(109120-109228)
scaffold0035 (3-113)||(117621-117729)
scaffold0035 (195-249)||(109309-109363)
scaffold0035 (195-249)||(117810-117864)
[»] scaffold0083 (2 HSPs)
scaffold0083 (180-249)||(15217-15285)
scaffold0083 (3-114)||(15343-15450)
[»] scaffold0120 (6 HSPs)
scaffold0120 (199-249)||(31554-31604)
scaffold0120 (199-249)||(47402-47452)
scaffold0120 (57-114)||(21991-22048)
scaffold0120 (57-114)||(31690-31747)
scaffold0120 (57-114)||(47259-47316)
scaffold0120 (199-249)||(21855-21905)
[»] scaffold0260 (2 HSPs)
scaffold0260 (180-249)||(8692-8760)
scaffold0260 (3-114)||(8828-8935)
[»] scaffold0022 (2 HSPs)
scaffold0022 (195-249)||(112394-112448)
scaffold0022 (4-114)||(112203-112313)
[»] scaffold0610 (2 HSPs)
scaffold0610 (6-114)||(234-342)
scaffold0610 (195-249)||(424-478)
[»] scaffold0554 (1 HSPs)
scaffold0554 (6-114)||(2395-2503)
[»] scaffold0026 (1 HSPs)
scaffold0026 (195-249)||(89713-89767)
[»] scaffold1867 (2 HSPs)
scaffold1867 (57-113)||(623-680)
scaffold1867 (195-249)||(489-542)
[»] scaffold0816 (2 HSPs)
scaffold0816 (57-113)||(2776-2833)
scaffold0816 (197-249)||(2917-2968)
[»] scaffold0016 (2 HSPs)
scaffold0016 (57-113)||(164693-164750)
scaffold0016 (197-249)||(164558-164609)
[»] scaffold0342 (2 HSPs)
scaffold0342 (199-249)||(12614-12664)
scaffold0342 (78-114)||(12748-12784)
[»] scaffold0589 (1 HSPs)
scaffold0589 (195-249)||(8150-8204)
[»] scaffold0058 (1 HSPs)
scaffold0058 (195-249)||(70154-70208)


Alignment Details
Target: chr6 (Bit Score: 96; Significance: 4e-47; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 16086607 - 16086497
Alignment:
Q  3 agaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttca 102  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  16086607 agaaatgggttaagtccattaagtttgagagttaggcccattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttca-ttca 16086509  T
Q  103 taagatattttt 114  Q
    ||||||||||||    
T  16086508 taagatattttt 16086497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 16107106 - 16106996
Alignment:
Q  3 agaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttca 102  Q
    |||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  16107106 agaaatgggttaagtccattaagtttgagagttaggcccattaaagggacttgatataaaaacctactcttatgagaaatttcctcacactttca-ttca 16107008  T
Q  103 taagatattttt 114  Q
    ||||||||||||    
T  16107007 taagatattttt 16106996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 31628779 - 31628672
Alignment:
Q  3 agaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttca 102  Q
    |||||||||||||||||||| |||| ||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  31628779 agaaatgggttaagtccattaagtt-gagggttaggcccattaaggggacttgatataaaaatatactcttatgagaaattttctcacactttcatttca 31628681  T
Q  103 taagatatt 111  Q
    |||||||||    
T  31628680 taagatatt 31628672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 18399530 - 18399419
Alignment:
Q  3 agaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttca-tttc 101  Q
    |||||||||||||||| ||| |||| ||| |||||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||    
T  18399530 agaaatgggttaagtctattaagtt-gagggttaggcccattaaggggacttgatataaaaacctagtcttatgagaaatttcctcacactttcattttc 18399432  T
Q  102 ataagatattttt 114  Q
    |||||||||||||    
T  18399431 ataagatattttt 18399419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 180 - 249
Target Start/End: Complemental strand, 18777543 - 18777474
Alignment:
Q  180 tcaagggttggcagaagagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  18777543 tcaagggttgggagaagagctaggagcaaaattgaagcctaagctagagagattaacctaactaaggtaa 18777474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 180 - 249
Target Start/End: Complemental strand, 32899204 - 32899135
Alignment:
Q  180 tcaagggttggcagaagagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  32899204 tcaagggttgggagaagagctaggagcaaaattgaagtctaagctagatagattaacctaactaaggtaa 32899135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 180 - 249
Target Start/End: Complemental strand, 16106930 - 16106861
Alignment:
Q  180 tcaagggttggcagaagagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    ||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  16106930 tcaagggttgggagaagagctaggagtaaaattgaagcctaagctagagagattaacctaactaaggtaa 16106861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 180 - 249
Target Start/End: Complemental strand, 18433056 - 18432987
Alignment:
Q  180 tcaagggttggcagaagagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    ||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  18433056 tcaagggttgggagaagagctaggagaaaaattgaagcctaagctagagagattaacctaactaaggtaa 18432987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 18433231 - 18433122
Alignment:
Q  3 agaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttca 102  Q
    ||||||| |||||||||||| |||  ||| ||||| || ||||||| |||||| ||||||||| ||| ||||||||||||||||||||||||||| ||||    
T  18433231 agaaatgagttaagtccattaagtg-gagggttagacccattaaggagacttggtataaaaacctacacttatgagaaatttcctcacactttca-ttca 18433134  T
Q  103 taagatattttt 114  Q
    ||||||||||||    
T  18433133 taagatattttt 18433122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 18570872 - 18570761
Alignment:
Q  3 agaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttca 102  Q
    |||||||||||||||||||| ||||||||| ||||||| |||||||| || |  || |||||| |  |||||   |||||||||||||||||||||||||    
T  18570872 agaaatgggttaagtccattaagtttgagaattaggcccattaagggaacatactacaaaaaccttgtcttagaggaaatttcctcacactttcatttca 18570773  T
Q  103 taagatattttt 114  Q
    ||||||||||||    
T  18570772 taagatattttt 18570761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 180 - 249
Target Start/End: Complemental strand, 16086431 - 16086362
Alignment:
Q  180 tcaagggttggcagaagagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    ||||||||||| ||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  16086431 tcaagggttgggagaagaaataggagcaaaattgaagcctaagctagagagattaacctaactaaggtaa 16086362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 180 - 249
Target Start/End: Original strand, 25640395 - 25640463
Alignment:
Q  180 tcaagggttggcagaagagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    ||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||| |||||||||||    
T  25640395 tcaagggttgggagaagagctaggagcaaaattgaagcctaatctagagagattaacc-aactaaggtaa 25640463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 18777720 - 18777610
Alignment:
Q  3 agaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttca 102  Q
    |||||||||||||||||||| |||| ||| |||||||| | |   | ||| |  ||||| ||| ||||||||||||||||||||||||||||||||| ||    
T  18777720 agaaatgggttaagtccattaagtt-gagggttaggcccaattgtgagacctactataataacctactcttatgagaaatttcctcacactttcattcca 18777622  T
Q  103 taagatattttt 114  Q
    ||||||||||||    
T  18777621 taagatattttt 18777610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 18399337 - 18399283
Alignment:
Q  195 agagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    |||||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  18399337 agagctaggagcaaaattgaagtctaagctagggagattaatctaactaaggtaa 18399283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 72 - 114
Target Start/End: Complemental strand, 32899313 - 32899271
Alignment:
Q  72 ttatgagaaatttcctcacactttcatttcataagatattttt 114  Q
    |||||||||||||||||||||||||| ||||||||||||||||    
T  32899313 ttatgagaaatttcctcacactttcacttcataagatattttt 32899271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 57 - 113
Target Start/End: Complemental strand, 22441469 - 22441412
Alignment:
Q  57 tataaaaacatactcttatgagaaatttcctcacactttcatttca-taagatatttt 113  Q
    |||| ||||||||||||| |||||||||||||||||||||||| || |||||||||||    
T  22441469 tatataaacatactcttaggagaaatttcctcacactttcattacactaagatatttt 22441412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 31628589 - 31628549
Alignment:
Q  195 agagctaggagcaaaattgaagtctaagctagagagattaa 235  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  31628589 agagctaggagcaaaattgaagcctaagctagagagattaa 31628549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 100
Target Start/End: Original strand, 35135673 - 35135765
Alignment:
Q  8 tgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcattt 100  Q
    ||||||||||||| | ||||| || |||||||| ||||||||||| |  |||| ||||||  ||||||  |||||||| ||||||||||||||    
T  35135673 tgggttaagtccactaagttttagggttaggcccattaaggggacatcctatataaacattgtcttataggaaatttcgtcacactttcattt 35135765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 13014557 - 13014610
Alignment:
Q  195 agagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    |||||||||||||||||| ||| ||||||||| ||||||||||| ||||||||||    
T  13014557 agagctaggagcaaaatttaagcctaagctagggagattaacct-actaaggtaa 13014610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 15079559 - 15079613
Alignment:
Q  195 agagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    |||||||||||||||| |||||  |||||||||| |||||| |||||||||||||    
T  15079559 agagctaggagcaaaagtgaagcttaagctagagggattaatctaactaaggtaa 15079613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 22441331 - 22441278
Alignment:
Q  195 agagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    ||||||||||| |||||||||||||||||||  ||||||||||| ||||||||||    
T  22441331 agagctaggagaaaaattgaagtctaagctatggagattaacct-actaaggtaa 22441278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 113
Target Start/End: Complemental strand, 33325279 - 33325174
Alignment:
Q  8 tgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttcataaga 107  Q
    ||||||||||||| | ||||| || |||||||| ||||||||||| |  |||| ||||||  ||||||  | |||||| ||||||||||||||  | |||    
T  33325279 tgggttaagtccactaagttttagggttaggcccattaaggggacatactatataaacattgtcttataggtaatttcgtcacactttcatttacttaga 33325180  T
Q  108 tatttt 113  Q
    ||||||    
T  33325179 tatttt 33325174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 18570675 - 18570623
Alignment:
Q  196 gagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    ||||||||||||||||||||| ||||||||  ||||||||| | ||||||||||    
T  18570675 gagctaggagcaaaattgaagcctaagctaaggagattaacat-actaaggtaa 18570623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 57 - 114
Target Start/End: Original strand, 25633445 - 25633500
Alignment:
Q  57 tataaaaacatactcttatgagaaatttcctcacactttcatttcataagatattttt 114  Q
    ||||||||| |||||||||||| |||||||||||||||||  ||||||| ||||||||    
T  25633445 tataaaaacctactcttatgag-aatttcctcacactttc-cttcataaaatattttt 25633500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 84; Significance: 5e-40; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 20561286 - 20561397
Alignment:
Q  3 agaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttca 102  Q
    ||||||||||||| ||||||  |||||||||||||||| |||||||||||||||||||||||| || |||| ||||||||||||||||||||||||||||    
T  20561286 agaaatgggttaaatccattaggtttgagagttaggcccattaaggggacttgatataaaaacctagtcttgtgagaaatttcctcacactttcatttca 20561385  T
Q  103 taagatattttt 114  Q
    ||||||||||||    
T  20561386 taagatattttt 20561397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 20572848 - 20572959
Alignment:
Q  3 agaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttca 102  Q
    ||||||||||||| ||||||  |||||||||||||||| |||||||||||||||||||||||| || |||| ||||||||||||||||||||||||||||    
T  20572848 agaaatgggttaaatccattaggtttgagagttaggcccattaaggggacttgatataaaaacctagtcttgtgagaaatttcctcacactttcatttca 20572947  T
Q  103 taagatattttt 114  Q
    ||||||||||||    
T  20572948 taagatattttt 20572959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 41247245 - 41247136
Alignment:
Q  3 agaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttca 102  Q
    ||||||||||||||||||||||||  ||| |||||||| ||| ||| ||||||| |||||||||||| ||||||||||||||||||||||||||| ||||    
T  41247245 agaaatgggttaagtccattgagtg-gagggttaggcccattgaggagacttgacataaaaacatacacttatgagaaatttcctcacactttcacttca 41247147  T
Q  103 taagatatttt 113  Q
     ||||||||||    
T  41247146 caagatatttt 41247136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 20529508 - 20529619
Alignment:
Q  3 agaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaa-catactcttatgagaaatttcctcacactttcatttc 101  Q
    |||||| ||||||||||||| || ||||| |||||||| ||||||||||||||||| ||||| | ||||| ||| |||||||||||||||||||||||||    
T  20529508 agaaattggttaagtccatt-aggttgagggttaggcccattaaggggacttgataaaaaaaacctactcgtataagaaatttcctcacactttcatttc 20529606  T
Q  102 ataagatattttt 114  Q
    |||||||||||||    
T  20529607 ataagatattttt 20529619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 180 - 249
Target Start/End: Original strand, 20529686 - 20529755
Alignment:
Q  180 tcaagggttggcagaagagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    ||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  20529686 tcaagggttgggagaagatctaggagcaaaattgaagcctaagctagagagattaacctaactaaggtaa 20529755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 25123029 - 25122920
Alignment:
Q  3 agaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttca 102  Q
    |||||||||||||||||||| |||  ||| ||||| || ||||||| ||||||||||||||||  || |||||||||||||||||||| |||||| ||||    
T  25123029 agaaatgggttaagtccattaagtg-gagggttagacccattaaggagacttgatataaaaaccaacacttatgagaaatttcctcaccctttca-ttca 25122932  T
Q  103 taagatattttt 114  Q
    ||||||||||||    
T  25122931 taagatattttt 25122920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 114
Target Start/End: Original strand, 20653690 - 20653799
Alignment:
Q  4 gaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttcat 103  Q
    ||||||||||||||||||| |||| ||| |||||||| ||| | ||||| |  ||||||| | || ||||||||||||||||| ||||||||||||||||    
T  20653690 gaaatgggttaagtccattaagtt-gagggttaggcccatttatgggacatactataaaagcctagtcttatgagaaatttccacacactttcatttcat 20653788  T
Q  104 aagatattttt 114  Q
    |||||||||||    
T  20653789 aagatattttt 20653799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 181 - 249
Target Start/End: Complemental strand, 25122853 - 25122786
Alignment:
Q  181 caagggttggcagaagagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  25122853 caagggttgggagaagagctaggagcaaaattgaagcctaagctagagagattaacct-actaaggtaa 25122786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 180 - 249
Target Start/End: Complemental strand, 37612081 - 37612013
Alignment:
Q  180 tcaagggttggcagaagagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    ||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||    
T  37612081 tcaagggttgggagaagagctaggagcaaaattgaagcctaagatagagagattaacct-actaaggtaa 37612013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 180 - 249
Target Start/End: Complemental strand, 20482016 - 20481948
Alignment:
Q  180 tcaagggttggcagaagagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    ||||||||||| ||||||| ||||||||||||||||| ||||||||| ||||||||||| ||||||||||    
T  20482016 tcaagggttgggagaagaggtaggagcaaaattgaagcctaagctagggagattaacct-actaaggtaa 20481948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 114
Target Start/End: Complemental strand, 21681589 - 21681485
Alignment:
Q  10 ggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttcataagata 109  Q
    ||||||||||||  || || ||||||||||| ||| |||||||||  ||||||||| |  |||||   ||||||||||||||||||||| ||||||||||    
T  21681589 ggttaagtccatgaagctttagagttaggcccatttaggggacttactataaaaaccttgtcttagaggaaatttcctcacactttcatctcataagata 21681490  T
Q  110 ttttt 114  Q
    |||||    
T  21681489 ttttt 21681485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 19992716 - 19992824
Alignment:
Q  3 agaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttca 102  Q
    ||||||||||||||| |||| |||  ||| |||||||| | |||||||||||  ||||||||| |||||||||||| ||||||||||| |||||  ||||    
T  19992716 agaaatgggttaagtacattaagtg-gagggttaggcccaataaggggacttagtataaaaacctactcttatgag-aatttcctcacgctttc-cttca 19992812  T
Q  103 taagatattttt 114  Q
    ||||||||||||    
T  19992813 taagatattttt 19992824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 20561479 - 20561533
Alignment:
Q  195 agagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    |||||||||||||||||||||| ||||||||| |||||||| |||||||||||||    
T  20561479 agagctaggagcaaaattgaagcctaagctagggagattaatctaactaaggtaa 20561533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 20573040 - 20573094
Alignment:
Q  195 agagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    |||||||||||||||||||||| ||||||||| |||||||| |||||||||||||    
T  20573040 agagctaggagcaaaattgaagcctaagctagggagattaatctaactaaggtaa 20573094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 20653881 - 20653935
Alignment:
Q  195 agagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    |||||||||||||||||||||| ||||||||| |||||||| |||||||||||||    
T  20653881 agagctaggagcaaaattgaagcctaagctagggagattaatctaactaaggtaa 20653935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 182 - 249
Target Start/End: Complemental strand, 41247068 - 41247002
Alignment:
Q  182 aagggttggcagaagagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    ||||||| | ||||||| ||||||||||||||||| |||||||||||||||| |||| ||||||||||    
T  41247068 aagggttcggagaagaggtaggagcaaaattgaagcctaagctagagagattgacct-actaaggtaa 41247002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 249
Target Start/End: Original strand, 22234639 - 22234707
Alignment:
Q  180 tcaagggttggcagaagagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    ||||||||||| ||||||||||||||||||||||||| ||||| | | |||||||| || ||||||||||    
T  22234639 tcaagggttgggagaagagctaggagcaaaattgaagactaagtttgggagattaatct-actaaggtaa 22234707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 21681403 - 21681349
Alignment:
Q  195 agagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    ||||||||||| |||||||||| ||||||||| |||||||| |||| ||||||||    
T  21681403 agagctaggagaaaaattgaagcctaagctagggagattaatctaaataaggtaa 21681349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 61 - 114
Target Start/End: Complemental strand, 20482134 - 20482082
Alignment:
Q  61 aaaacatactcttatgagaaatttcctcacactttcatttcataagatattttt 114  Q
    ||||| ||||||||| |||||||||| |||||||||| ||||||||||||||||    
T  20482134 aaaacctactcttataagaaatttccacacactttca-ttcataagatattttt 20482082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 113
Target Start/End: Original strand, 22234517 - 22234571
Alignment:
Q  57 tataaaaacatactcttatgagaaatttcctcacactttcatttcataagatatttt 113  Q
    ||||||||| |||||||||||| |||||||||||||||||  |||||||||||||||    
T  22234517 tataaaaacctactcttatgag-aatttcctcacactttc-cttcataagatatttt 22234571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 19992906 - 19992959
Alignment:
Q  195 agagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    ||||||||||| |||||||||| ||||||||| |||||||| || ||||||||||    
T  19992906 agagctaggagaaaaattgaagcctaagctagggagattaatct-actaaggtaa 19992959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 76; Significance: 3e-35; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 13836210 - 13836099
Alignment:
Q  3 agaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttca 102  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||| |||| || ||||||||||||||||||||||  ||||    
T  13836210 agaaatgggttaagtccattaagtttgagagttaggcccattaaggggacttggtataaaaacctactattgtgagaaatttcctcacactttcgcttca 13836111  T
Q  103 taagatattttt 114  Q
    ||||||| ||||    
T  13836110 taagatactttt 13836099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 50111707 - 50111817
Alignment:
Q  3 agaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttca 102  Q
    |||| ||||||||||||||| |||  |||||||||||| |||||||| ||||||||||||||| |  |||||||||||||||||||||||||||||||||    
T  50111707 agaattgggttaagtccattaagta-gagagttaggcccattaagggaacttgatataaaaacctggtcttatgagaaatttcctcacactttcatttca 50111805  T
Q  103 taagatattttt 114  Q
    ||||||||||||    
T  50111806 taagatattttt 50111817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 54424601 - 54424492
Alignment:
Q  3 agaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttca 102  Q
    |||||||||||||||||||| ||||  || |||||||| |||||||||||||| ||||||||| ||| ||||||||||||||||||||||||| | ||||    
T  54424601 agaaatgggttaagtccattaagttgaag-gttaggcccattaaggggacttggtataaaaacctacacttatgagaaatttcctcacactttta-ttca 54424504  T
Q  103 taagatattttt 114  Q
    ||||||||||||    
T  54424503 taagatattttt 54424492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 180 - 249
Target Start/End: Original strand, 6146602 - 6146671
Alignment:
Q  180 tcaagggttggcagaagagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  6146602 tcaagggttgggagaagagctaggagcaaaattgaagcctaagctagagagattaacctaactaaggtaa 6146671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 180 - 249
Target Start/End: Complemental strand, 17101066 - 17100997
Alignment:
Q  180 tcaagggttggcagaagagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  17101066 tcaagggttgggagaagagctaggagcaaaattgaagtctaagctagagaaattaacctaactaaggtaa 17100997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 180 - 249
Target Start/End: Complemental strand, 17101751 - 17101682
Alignment:
Q  180 tcaagggttggcagaagagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  17101751 tcaagggttgggagaagagctaggagcaaaattgaagtctaagctagagaaattaacctaactaaggtaa 17101682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 6146427 - 6146536
Alignment:
Q  3 agaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttca 102  Q
    |||||||||||||||||||| |||| ||| |||||||| ||||||| |||||||||||||||| ||| || |||||| ||||||||||||||||  ||||    
T  6146427 agaaatgggttaagtccattaagtt-gagggttaggcccattaaggagacttgatataaaaacctacactcatgagatatttcctcacactttc-cttca 6146524  T
Q  103 taagatattttt 114  Q
    ||||||||||||    
T  6146525 taagatattttt 6146536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 27 - 114
Target Start/End: Complemental strand, 30207785 - 30207699
Alignment:
Q  27 ttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttcataagatattttt 114  Q
    |||||||||||||| |||||||||||||| ||||||||| ||| |||||||||||||||| |||||||||| ||||||||||||||||    
T  30207785 ttgagagttaggcccattaaggggacttggtataaaaacctacacttatgagaaatttccacacactttca-ttcataagatattttt 30207699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 180 - 249
Target Start/End: Complemental strand, 54424426 - 54424357
Alignment:
Q  180 tcaagggttggcagaagagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    |||||| |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  54424426 tcaaggattgggagaagagctaggcgcaaaattgaagtctaagctagagagattaacctaactaaggtaa 54424357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 6153989 - 6154098
Alignment:
Q  3 agaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttca 102  Q
    ||||||| ||||||| |||| |||| ||| ||||| || ||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||  ||||    
T  6153989 agaaatgagttaagttcattaagtt-gagggttagacccattaaggagacttgatataaaaacctacacttatgagaaatttcctcacactttc-cttca 6154086  T
Q  103 taagatattttt 114  Q
    ||||||||||||    
T  6154087 taagatattttt 6154098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 180 - 242
Target Start/End: Complemental strand, 13836035 - 13835973
Alignment:
Q  180 tcaagggttggcagaagagctaggagcaaaattgaagtctaagctagagagattaacctaact 242  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  13836035 tcaagggttgggagaagagctaggagcaaaattgaagcctaagctagagagattaacctaact 13835973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 180 - 249
Target Start/End: Original strand, 6154164 - 6154233
Alignment:
Q  180 tcaagggttggcagaagagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    ||||||||||| |||||| |||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  6154164 tcaagggttgggagaagatctaggagcaaaattgaagcctaagctagagatattaacctaactaaggtaa 6154233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 180 - 249
Target Start/End: Complemental strand, 30207632 - 30207563
Alignment:
Q  180 tcaagggttggcagaagagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||| |||||||| |||||||||||||    
T  30207632 tcaagggttgggagaagagctaggagcaaaattgaagcctaagctagggagattaatctaactaaggtaa 30207563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 16181606 - 16181714
Alignment:
Q  3 agaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttca 102  Q
    |||||||||||||||||||| |||  ||| |||||||| | |||||||||||| ||||||||  |||||||||||| |||||||||||||||||  ||||    
T  16181606 agaaatgggttaagtccattaagta-gagggttaggcccaataaggggacttggtataaaaatctactcttatgag-aatttcctcacactttc-cttca 16181702  T
Q  103 taagatattttt 114  Q
    ||||||||||||    
T  16181703 taagatattttt 16181714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 14304634 - 14304528
Alignment:
Q  4 gaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttcat 103  Q
    |||||||||||| |||||| ||||||||||||||||| |||||||||||||||||  ||||| |  |||||   ||||||||| |||||||||| |||||    
T  14304634 gaaatgggttaaatccattaagtttgagagttaggcccattaaggggacttgata--aaaaccttgtcttagaggaaatttccacacactttca-ttcat 14304538  T
Q  104 aagatatttt 113  Q
    ||||||||||    
T  14304537 aagatatttt 14304528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 50111899 - 50111953
Alignment:
Q  195 agagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  50111899 agagctaggagcaaaattgaagcctaagctagagagattaacctaactaaggtaa 50111953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 180 - 249
Target Start/End: Original strand, 317344 - 317412
Alignment:
Q  180 tcaagggttggcagaagagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||    
T  317344 tcaagggttgggagaagagctaggagcaaaattgaagcctaagctagggagattaacct-actaaggtaa 317412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 180 - 249
Target Start/End: Original strand, 34439176 - 34439244
Alignment:
Q  180 tcaagggttggcagaagagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    ||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||    
T  34439176 tcaagggttgggagaagagctaggagcaaaattgaagcctatgctagagagattaacct-actaaggtaa 34439244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 112
Target Start/End: Complemental strand, 40939714 - 40939609
Alignment:
Q  7 atgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttcataag 106  Q
    ||||||||| |||||| || || ||||||||||| |||||||||||||  ||||||||| |  |||||   ||||||||||||||||||||||||| |||    
T  40939714 atgggttaaatccattaagctttagagttaggcccattaaggggacttactataaaaaccttgtcttagatgaaatttcctcacactttcatttcacaag 40939615  T
Q  107 atattt 112  Q
    ||||||    
T  40939614 atattt 40939609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 6 - 114
Target Start/End: Original strand, 17522548 - 17522656
Alignment:
Q  6 aatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttcataa 105  Q
    ||||||||||||||||| || || || |||||||| ||| ||||||| |  ||||||||| |  |||||   ||||||||||||||||||||||||||||    
T  17522548 aatgggttaagtccattaagctttagggttaggcccatttaggggacatcctataaaaaccttgtcttagaggaaatttcctcacactttcatttcataa 17522647  T
Q  106 gatattttt 114  Q
    |||||||||    
T  17522648 gatattttt 17522656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 17101925 - 17101817
Alignment:
Q  3 agaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttca 102  Q
    |||||||||||||||||||  |||| ||| |||||||| | ||||| |||||  ||||||||| |||||||||||| |||||||||||||||||| ||||    
T  17101925 agaaatgggttaagtccatcaagtt-gagggttaggcccaataaggagacttagtataaaaacctactcttatgag-aatttcctcacactttca-ttca 17101829  T
Q  103 taagatattttt 114  Q
    || |||||||||    
T  17101828 tatgatattttt 17101817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 35124287 - 35124178
Alignment:
Q  3 agaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttca 102  Q
    |||||||||||||||||||| |||| ||| |||||||| ||||| | ||| |  ||||||| | || ||||||||||||||||| |||||||||| ||||    
T  35124287 agaaatgggttaagtccattaagtt-gagggttaggcccattaatgagacatactataaaagcctagtcttatgagaaatttccacacactttca-ttca 35124190  T
Q  103 taagatattttt 114  Q
    ||||||||||||    
T  35124189 taagatattttt 35124178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 14298820 - 14298766
Alignment:
Q  195 agagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  14298820 agagctaggagaaaaattgaagcctaagctagagagattaacctaactaaggtaa 14298766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 14304447 - 14304393
Alignment:
Q  195 agagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  14304447 agagctaggagaaaaattgaagcctaagctagagagattaacctaactaaggtaa 14304393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 4 - 114
Target Start/End: Complemental strand, 17101239 - 17101132
Alignment:
Q  4 gaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttcat 103  Q
    ||||||||||||||||||  |||| ||| |||||||| | ||||| |||||  ||||||||| |||||||||||| |||||||||||||||||| |||||    
T  17101239 gaaatgggttaagtccatcaagtt-gagggttaggcccaataaggagacttagtataaaaacctactcttatgag-aatttcctcacactttca-ttcat 17101143  T
Q  104 aagatattttt 114  Q
    | |||||||||    
T  17101142 atgatattttt 17101132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 4 - 114
Target Start/End: Original strand, 55440515 - 55440625
Alignment:
Q  4 gaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttcat 103  Q
    |||||||||||| |||||| ||  | ||||||||||| ||| ||| |||||  ||||||||| |  |||||   ||||||||||||||||||||||||||    
T  55440515 gaaatgggttaaatccattaagccttagagttaggcccatttaggagacttactataaaaaccttgtcttagaggaaatttcctcacactttcatttcat 55440614  T
Q  104 aagatattttt 114  Q
    |||||||||||    
T  55440615 aagatattttt 55440625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 180 - 249
Target Start/End: Complemental strand, 38528140 - 38528072
Alignment:
Q  180 tcaagggttggcagaagagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    ||||||||||| |||||||||||||||||||||||||  |||||||| ||||||||||| ||||||||||    
T  38528140 tcaagggttgggagaagagctaggagcaaaattgaagcttaagctagggagattaacct-actaaggtaa 38528072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 16995719 - 16995827
Alignment:
Q  3 agaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttca 102  Q
    |||||||||||||||||||| || | ||| |||||||| | ||||  |||||  ||||||||| |||||||||||| |||||||||||||||||  ||||    
T  16995719 agaaatgggttaagtccattaag-tggagggttaggcccaataagaagacttagtataaaaacctactcttatgag-aatttcctcacactttc-cttca 16995815  T
Q  103 taagatattttt 114  Q
    ||||||||||||    
T  16995816 taagatattttt 16995827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 14527928 - 14527982
Alignment:
Q  195 agagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    |||||||||||||||||||||| ||||||||| |||||||| |||||||||||||    
T  14527928 agagctaggagcaaaattgaagcctaagctagggagattaatctaactaaggtaa 14527982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 35124094 - 35124040
Alignment:
Q  195 agagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    |||||||||||||||||||||| ||||||||| |||||||| |||||||||||||    
T  35124094 agagctaggagcaaaattgaagcctaagctagggagattaatctaactaaggtaa 35124040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 38528315 - 38528208
Alignment:
Q  3 agaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttca 102  Q
    |||||||||||||||||||| |||  |||  ||||||| | ||||| |||||  ||||||||| |||||||||||| |||||||||||||||||  ||||    
T  38528315 agaaatgggttaagtccattaagtg-gaggattaggcccaataaggagacttagtataaaaacctactcttatgag-aatttcctcacactttc-cttca 38528219  T
Q  103 taagatatttt 113  Q
    |||||||||||    
T  38528218 taagatatttt 38528208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 113
Target Start/End: Original strand, 53898250 - 53898358
Alignment:
Q  3 agaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttca 102  Q
    |||||||||||||||||||| |||| ||| |||| ||| ||| | | | |||  ||||||||| || ||||||||||||||||| |||||||||| ||||    
T  53898250 agaaatgggttaagtccattaagtt-gagggttatgcccatttatgaggcttactataaaaacctaatcttatgagaaatttccacacactttca-ttca 53898347  T
Q  103 taagatatttt 113  Q
    |||||||||||    
T  53898348 taagatatttt 53898358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 12349388 - 12349441
Alignment:
Q  196 gagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    ||||||||||||| |||||||  |||||||||||||||||||||||||||||||    
T  12349388 gagctaggagcaatattgaagcttaagctagagagattaacctaactaaggtaa 12349441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 180 - 249
Target Start/End: Original strand, 16995895 - 16995963
Alignment:
Q  180 tcaagggttggcagaagagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||  ||||||| || ||||||||||    
T  16995895 tcaagggttgggagaagagctaggagcaaaattgaagcctaagctaggtagattaagct-actaaggtaa 16995963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 180 - 249
Target Start/End: Original strand, 22144106 - 22144174
Alignment:
Q  180 tcaagggttggcagaagagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    ||||||||||| ||||||| ||| || |||||||||| ||||||||||||||||||||| ||||||||||    
T  22144106 tcaagggttgggagaagagatagaagaaaaattgaagcctaagctagagagattaacct-actaaggtaa 22144174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 12348927 - 12349037
Alignment:
Q  3 agaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttca 102  Q
    |||||||| ||||||||||| |||  ||| |||||||| | ||||| |||||  |||| |||| |  |||||   |||||||||||||||||||||||||    
T  12348927 agaaatggattaagtccattaagtg-gagggttaggcccaataaggagacttagtatataaaccttgtcttagaggaaatttcctcacactttcatttca 12349025  T
Q  103 taagatattttt 114  Q
    ||||||||||||    
T  12349026 taagatattttt 12349037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 60 - 113
Target Start/End: Complemental strand, 13818044 - 13817990
Alignment:
Q  60 aaaaacatactcttatgagaaatttcctcacactttcatttca-taagatatttt 113  Q
    |||||||||| ||||||||||||||||||||||||||||| || |||||||||||    
T  13818044 aaaaacatacacttatgagaaatttcctcacactttcattacactaagatatttt 13817990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 114
Target Start/End: Original strand, 14527738 - 14527847
Alignment:
Q  6 aatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgag-aaatttcctcacactttca-tttcat 103  Q
    |||||||||| |||||| || || | |||||||||||||||||||||||  ||||||| | |  ||||| ||| ||||||||||||||||||| ||||||    
T  14527738 aatgggttaaatccattaagctttatagttaggcctattaaggggacttactataaaagccttgtctta-gagaaaatttcctcacactttcattttcat 14527836  T
Q  104 aagatattttt 114  Q
    || ||||||||    
T  14527837 aaaatattttt 14527847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 17522738 - 17522792
Alignment:
Q  195 agagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    |||||||||||||||||||||| ||||||||| ||||||||  ||||||||||||    
T  17522738 agagctaggagcaaaattgaagcctaagctagggagattaatataactaaggtaa 17522792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 57 - 114
Target Start/End: Original strand, 34439051 - 34439109
Alignment:
Q  57 tataaaaacatactcttatgagaaatttcctcacactttcatttca-taagatattttt 114  Q
    |||| |||| ||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  34439051 tatataaacctacacttatgagaaatttcctcacactttcatttcactaagatattttt 34439109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 40939525 - 40939471
Alignment:
Q  195 agagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    |||||||||||||||||||||| ||||||||| ||||||||  ||||||||||||    
T  40939525 agagctaggagcaaaattgaagcctaagctagggagattaatataactaaggtaa 40939471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 55440706 - 55440760
Alignment:
Q  195 agagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    |||||||||||||||||||||| ||| ||||| |||||||| |||||||||||||    
T  55440706 agagctaggagcaaaattgaagcctaggctagggagattaatctaactaaggtaa 55440760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 114
Target Start/End: Complemental strand, 14296026 - 14295918
Alignment:
Q  6 aatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaa-tttcctcacactttcatttcata 104  Q
    |||||||||| |||| | || || || |||||||| ||||||||||| |  ||||||||| |  ||||| |||||| ||||||||||||||||||||| |    
T  14296026 aatgggttaaatccactaagctttagggttaggcccattaaggggacatactataaaaaccttgtctta-gagaaaatttcctcacactttcatttcaca 14295928  T
Q  105 agatattttt 114  Q
    ||||||||||    
T  14295927 agatattttt 14295918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 114
Target Start/End: Complemental strand, 14301653 - 14301545
Alignment:
Q  6 aatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaa-tttcctcacactttcatttcata 104  Q
    |||||||||| |||| | || || || |||||||| ||||||||||| |  ||||||||| |  ||||| |||||| ||||||||||||||||||||| |    
T  14301653 aatgggttaaatccactaagctttagggttaggcccattaaggggacatactataaaaaccttgtctta-gagaaaatttcctcacactttcatttcaca 14301555  T
Q  105 agatattttt 114  Q
    ||||||||||    
T  14301554 agatattttt 14301545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 60 - 113
Target Start/End: Complemental strand, 17939099 - 17939046
Alignment:
Q  60 aaaaacatactcttatgagaaatttcctcacactttcatttcataagatatttt 113  Q
    |||||| ||| ||| |||||||||||||||||||||||||||| ||||||||||    
T  17939099 aaaaacctacacttgtgagaaatttcctcacactttcatttcacaagatatttt 17939046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 57 - 113
Target Start/End: Original strand, 19570401 - 19570458
Alignment:
Q  57 tataaaaacatactcttatgagaaatttcctcacactttcatttca-taagatatttt 113  Q
    |||| ||||| |||||||||||||||||||||||||||||||| || |||||||||||    
T  19570401 tatataaacacactcttatgagaaatttcctcacactttcattacactaagatatttt 19570458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 197 - 249
Target Start/End: Complemental strand, 13817906 - 13817855
Alignment:
Q  197 agctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    ||||| |||||||||||||||||||||||| ||||||||||| ||||||||||    
T  13817906 agctatgagcaaaattgaagtctaagctagggagattaacct-actaaggtaa 13817855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 3578487 - 3578433
Alignment:
Q  195 agagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    ||||||| ||| |||||||||| ||||||||| |||||||| |||||||||||||    
T  3578487 agagctatgagaaaaattgaagcctaagctagggagattaatctaactaaggtaa 3578433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 60 - 113
Target Start/End: Complemental strand, 8632323 - 8632269
Alignment:
Q  60 aaaaacatactcttatgagaaatttcctcacactttcatttca-taagatatttt 113  Q
    |||||| ||| |||||||||||||||| ||||||||||||||| |||||||||||    
T  8632323 aaaaacctacacttatgagaaatttccacacactttcatttcactaagatatttt 8632269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 11060855 - 11060909
Alignment:
Q  195 agagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    |||||||||||||||| |||||  |||||||| |||||||| |||||||||||||    
T  11060855 agagctaggagcaaaactgaagcttaagctagggagattaatctaactaaggtaa 11060909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 16181796 - 16181849
Alignment:
Q  195 agagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    |||||||||||||||||||||| ||||||||| |||||||| || ||||||||||    
T  16181796 agagctaggagcaaaattgaagcctaagctagggagattaatct-actaaggtaa 16181849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 22143930 - 22144038
Alignment:
Q  3 agaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttca 102  Q
    ||||||||||||| ||||||  ||  ||| |||||||| | ||||| |||||  |||| |||  |||||||||||||| |||||||||||||||  ||||    
T  22143930 agaaatgggttaaatccattatgtg-gagggttaggcccaataaggagacttagtatacaaaactactcttatgagaa-tttcctcacactttc-cttca 22144026  T
Q  103 taagatattttt 114  Q
    ||||||||||||    
T  22144027 taagatattttt 22144038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 14295837 - 14295783
Alignment:
Q  195 agagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    |||||||||||| ||||||||  |||| |||| |||||||| |||||||||||||    
T  14295837 agagctaggagctaaattgaaccctaatctagggagattaatctaactaaggtaa 14295783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 14301464 - 14301410
Alignment:
Q  195 agagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    |||||||||||| ||||||||  |||| |||| |||||||| |||||||||||||    
T  14301464 agagctaggagctaaattgaaccctaatctagggagattaatctaactaaggtaa 14301410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 57 - 114
Target Start/End: Original strand, 317221 - 317276
Alignment:
Q  57 tataaaaacatactcttatgagaaatttcctcacactttcatttcataagatattttt 114  Q
    ||||||||| |||||||||| ||| |||||||||||||||  ||||||||||||||||    
T  317221 tataaaaacctactcttatgggaa-tttcctcacactttc-cttcataagatattttt 317276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 3578676 - 3578567
Alignment:
Q  4 gaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttcat 103  Q
    ||||||||||||||| ||| ||  | || |||||||| ||| ||||||| |  ||||||||| |  || |||  ||||||| ||||||||||||||| |     
T  3578676 gaaatgggttaagtctattaagccttagggttaggcccatttaggggacatcctataaaaaccttatcctataggaaattttctcacactttcattttac 3578577  T
Q  104 aagatatttt 113  Q
    ||||||||||    
T  3578576 aagatatttt 3578567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 100
Target Start/End: Original strand, 12487439 - 12487531
Alignment:
Q  8 tgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcattt 100  Q
    ||||||||||||| | || || || |||||||| ||||||||||| |  |||| |||| |  |||||   |||||||||||||||||||||||    
T  12487439 tgggttaagtccactaagctttagggttaggcccattaaggggacgtcctatataaaccttgtcttagaggaaatttcctcacactttcattt 12487531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 249
Target Start/End: Original strand, 19570542 - 19570593
Alignment:
Q  197 agctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    |||||||||||||||| ||| || |||||| ||||||||||| ||||||||||    
T  19570542 agctaggagcaaaattcaagccttagctagggagattaacct-actaaggtaa 19570593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 72; Significance: 8e-33; HSPs: 4)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 41249 - 41139
Alignment:
Q  3 agaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttca 102  Q
    ||||||||||||||||||| ||||  ||| |||||||| ||||||| || ||||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  41249 agaaatgggttaagtccatggagtg-gagggttaggcccattaaggagatttgatgtaaaaacctactcttatgagaaatttcctcacactttcatttca 41151  T
Q  103 taagatattttt 114  Q
    ||||||||||||    
T  41150 taagatattttt 41139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 46756 - 46646
Alignment:
Q  3 agaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttca 102  Q
    ||||||| ||||||||||| ||||  ||| |||||||| ||||||| || ||||| ||||||| |||||||||||||||||||||||||||| |||||||    
T  46756 agaaatgagttaagtccatggagtg-gagggttaggcccattaaggagatttgatgtaaaaacctactcttatgagaaatttcctcacacttccatttca 46658  T
Q  103 taagatattttt 114  Q
    ||||||||||||    
T  46657 taagatattttt 46646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 180 - 249
Target Start/End: Complemental strand, 41072 - 41003
Alignment:
Q  180 tcaagggttggcagaagagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  41072 tcaagggttgggagaagagctaggagcaaaattgaagcctaagctaaagagattaacctaactaaggtaa 41003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 180 - 249
Target Start/End: Complemental strand, 46579 - 46510
Alignment:
Q  180 tcaagggttggcagaagagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||    
T  46579 tcaagggttgggagaagagctaggagcaaaattgaagcctaagctaaagagattaacctaattaaggtaa 46510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0396 (Bit Score: 71; Significance: 3e-32; HSPs: 2)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 3 - 113
Target Start/End: Original strand, 11365 - 11473
Alignment:
Q  3 agaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttca 102  Q
    |||||||||||||||||||| |||  | |||||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||| ||||    
T  11365 agaaatgggttaagtccattaagtg-gtgagttaggcccattaaggggacttgatataaaaacatactcttatgagaaaattccacacactttca-ttca 11462  T
Q  103 taagatatttt 113  Q
    |||||||||||    
T  11463 taagatatttt 11473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0396; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 245
Target Start/End: Original strand, 11557 - 11606
Alignment:
Q  196 gagctaggagcaaaattgaagtctaagctagagagattaacctaactaag 245  Q
    ||||||||| ||||||||||| ||||||||| |||||||| |||||||||    
T  11557 gagctaggaacaaaattgaagcctaagctagggagattaatctaactaag 11606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 71; Significance: 3e-32; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 4 - 114
Target Start/End: Original strand, 45458512 - 45458622
Alignment:
Q  4 gaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttcat 103  Q
    |||||||||||| |||||| ||||||||||||||||| |||||||||||||||||||||||| |  |||||   |||||||||| |||||||||||||||    
T  45458512 gaaatgggttaaatccattaagtttgagagttaggcccattaaggggacttgatataaaaaccttgtcttagaggaaatttccttacactttcatttcat 45458611  T
Q  104 aagatattttt 114  Q
    |||||||||||    
T  45458612 aagatattttt 45458622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 102
Target Start/End: Original strand, 21959121 - 21959219
Alignment:
Q  3 agaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttca 102  Q
    |||||||||||||||||||| |||  |||||||||||| |||||||||||||||||||||||| || ||||||||||||||| |||||||||||||||||    
T  21959121 agaaatgggttaagtccattaagtg-gagagttaggcccattaaggggacttgatataaaaacctagtcttatgagaaattttctcacactttcatttca 21959219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 20813205 - 20813314
Alignment:
Q  3 agaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttca 102  Q
    |||||||||||||||||||| |||  |||||||||||| ||||||||||||||||||| |||| || | ||||||||||||||| |||||||||| ||||    
T  20813205 agaaatgggttaagtccattaagtg-gagagttaggcccattaaggggacttgatatagaaacctagttttatgagaaatttccacacactttca-ttca 20813302  T
Q  103 taagatattttt 114  Q
    ||||||||||||    
T  20813303 taagatattttt 20813314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 30458495 - 30458386
Alignment:
Q  3 agaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttca 102  Q
    ||||||| ||||||||||||||||  ||| |||||||| ||||||| |||||| ||||||||| ||| ||||||||||||||||||||||||||| ||||    
T  30458495 agaaatgagttaagtccattgagtg-gagggttaggcccattaaggagacttggtataaaaacctacacttatgagaaatttcctcacactttca-ttca 30458398  T
Q  103 taagatattttt 114  Q
    ||||||||||||    
T  30458397 taagatattttt 30458386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 180 - 249
Target Start/End: Original strand, 21959297 - 21959366
Alignment:
Q  180 tcaagggttggcagaagagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21959297 tcaagagttgggagaagagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 21959366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 30232153 - 30232261
Alignment:
Q  5 aaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttcata 104  Q
    |||||||||||||||||| |||| ||| |||||||| ||| | |||||||  || |||||| || |||||||||||||||||||||||||||||||||||    
T  30232153 aaatgggttaagtccattaagtt-gagggttaggcccatttatgggacttactacaaaaacctagtcttatgagaaatttcctcacactttcatttcata 30232251  T
Q  105 agatattttt 114  Q
    ||||||||||    
T  30232252 agatattttt 30232261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 180 - 249
Target Start/End: Original strand, 30232329 - 30232398
Alignment:
Q  180 tcaagggttggcagaagagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30232329 tcaaggattgggagaagagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 30232398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 180 - 249
Target Start/End: Original strand, 819764 - 819833
Alignment:
Q  180 tcaagggttggcagaagagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    ||||||||||| |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  819764 tcaagggttgggagaagagctatgagcaaaattgaagcctaagctagagagattaacctaactaaggtaa 819833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 180 - 249
Target Start/End: Original strand, 20813380 - 20813449
Alignment:
Q  180 tcaagggttggcagaagagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    ||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  20813380 tcaagggttgggagaagagctaggagcgaaattgaagcctaagctagagagattaacctaactaaggtaa 20813449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 180 - 249
Target Start/End: Complemental strand, 34395671 - 34395602
Alignment:
Q  180 tcaagggttggcagaagagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    ||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  34395671 tcaagggttgggagaagagctaggagaaaaattgaagcctaagctagagagattaacctaactaaggtaa 34395602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 180 - 249
Target Start/End: Original strand, 45458689 - 45458758
Alignment:
Q  180 tcaagggttggcagaagagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  45458689 tcaagggttgggagaaaagctaggagcaaaattgaagtctaagctaaagagattaacctaactaaggtaa 45458758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 3 - 102
Target Start/End: Original strand, 819587 - 819685
Alignment:
Q  3 agaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttca 102  Q
    |||||||||||||||||||| |||| ||| || || || ||||||| |||||||||||||||| |||  |||||||||||||||||||||||||||||||    
T  819587 agaaatgggttaagtccattaagtt-gagggtcagacccattaaggagacttgatataaaaacctacatttatgagaaatttcctcacactttcatttca 819685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 12836858 - 12836967
Alignment:
Q  3 agaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttca 102  Q
    |||||||||||||||||||| |||  ||| |||||||| | ||||| |||||  ||||||||| ||||||||||||||||||||||||||||||| ||||    
T  12836858 agaaatgggttaagtccattaagtg-gagggttaggcccaataaggagacttagtataaaaacctactcttatgagaaatttcctcacactttca-ttca 12836955  T
Q  103 taagatattttt 114  Q
    ||| ||||||||    
T  12836956 taaaatattttt 12836967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 114
Target Start/End: Complemental strand, 16732762 - 16732652
Alignment:
Q  4 gaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttcat 103  Q
    |||||||||||| |||||| || || ||||||||||| || | ||||||||| ||||||||| |  |||||   ||||||||||||||||||||||||||    
T  16732762 gaaatgggttaaatccattaagctttagagttaggcccatcagggggacttgctataaaaaccttgtcttagaggaaatttcctcacactttcatttcat 16732663  T
Q  104 aagatattttt 114  Q
    |||||||||||    
T  16732662 aagatattttt 16732652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 180 - 249
Target Start/End: Complemental strand, 44056328 - 44056259
Alignment:
Q  180 tcaagggttggcagaagagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    ||||||||| | ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  44056328 tcaagggttagtagaagagctaggagcaaaattgaaacctaagctagagagattaacctaactaaggtaa 44056259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 180 - 249
Target Start/End: Original strand, 12837035 - 12837103
Alignment:
Q  180 tcaagggttggcagaagagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||    
T  12837035 tcaagggttgggagaagagctaggagcaaaattgaagcctaagctagggagattaacct-actaaggtaa 12837103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 23269783 - 23269836
Alignment:
Q  196 gagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  23269783 gagctaggagcaaaattgaagcctaagctagagagattaacctaactaaggtaa 23269836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 44347413 - 44347305
Alignment:
Q  3 agaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttca 102  Q
    |||||||||||||||||||| |||  ||| |||||||| | ||| | |||||  |||||||||||||||||||||| |||||||||||||||||  ||||    
T  44347413 agaaatgggttaagtccattaagtg-gagggttaggcccaataaagagacttagtataaaaacatactcttatgag-aatttcctcacactttc-cttca 44347317  T
Q  103 taagatattttt 114  Q
    ||||||||||||    
T  44347316 taagatattttt 44347305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 113
Target Start/End: Original strand, 8872132 - 8872240
Alignment:
Q  5 aaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttca-t 103  Q
    |||||||||||||||||| |||  ||| |||||||| | ||||| |||||  || |||| |||||||| |||||||||||||||||||||||||| || |    
T  8872132 aaatgggttaagtccattaagtg-gagggttaggcccaataaggagacttagtacaaaatcatactctcatgagaaatttcctcacactttcattacact 8872230  T
Q  104 aagatatttt 113  Q
    ||||||||||    
T  8872231 aagatatttt 8872240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 180 - 239
Target Start/End: Original strand, 8872307 - 8872366
Alignment:
Q  180 tcaagggttggcagaagagctaggagcaaaattgaagtctaagctagagagattaaccta 239  Q
    ||||||||| | ||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  8872307 tcaagggttaggagaagagctaggagcaaaattgaagcctaagctagggagattaaccta 8872366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 34395849 - 34395744
Alignment:
Q  3 agaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttca 102  Q
    |||||||||||||||||||| |||  ||| |||||||| | ||||| |||||  ||||||||| |||||||||||| ||||| |||||||||||  ||||    
T  34395849 agaaatgggttaagtccattaagtg-gagggttaggcccaataaggagacttagtataaaaacctactcttatgag-aatttactcacactttc-cttca 34395753  T
Q  103 taagatatt 111  Q
    |||||||||    
T  34395752 taagatatt 34395744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 18493983 - 18494093
Alignment:
Q  3 agaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttca 102  Q
    |||||||||||||||||||| || || || |||||||| ||| ||||||| |  ||||||||| |  |||||   ||||||||| |||||||||||||||    
T  18493983 agaaatgggttaagtccattaaggtt-agggttaggcccatttaggggacatcctataaaaaccttgtcttagaggaaatttccacacactttcatttca 18494081  T
Q  103 taagatattttt 114  Q
     |||||||||||    
T  18494082 caagatattttt 18494093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 199 - 249
Target Start/End: Complemental strand, 30458297 - 30458248
Alignment:
Q  199 ctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  30458297 ctaggagcaaaattgaagcctaagctagagagattaacct-actaaggtaa 30458248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 44056505 - 44056395
Alignment:
Q  3 agaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttca 102  Q
    |||||||||||||||||||| |||| ||| ||||||||||||   | ||     |||| |||| || | ||||||||||||| |||||||||||| ||||    
T  44056505 agaaatgggttaagtccattaagtt-gagggttaggcctatttgtgagatacactatataaacctagtattatgagaaattttctcacactttcacttca 44056407  T
Q  103 taagatattttt 114  Q
    ||||||||||||    
T  44056406 taagatattttt 44056395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 16732567 - 16732513
Alignment:
Q  195 agagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    |||||||||| ||||||||||| |||| |||| |||||||| |||||||||||||    
T  16732567 agagctaggaccaaaattgaagcctaaactagggagattaatctaactaaggtaa 16732513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 52265356 - 52265410
Alignment:
Q  195 agagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    |||||||||||| ||||||||| ||||||||| |||||||| || ||||||||||    
T  52265356 agagctaggagctaaattgaagcctaagctagggagattaatctgactaaggtaa 52265410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 60 - 113
Target Start/End: Original strand, 53907422 - 53907476
Alignment:
Q  60 aaaaacatactcttatgagaaatttcctcacactttcatttca-taagatatttt 113  Q
    |||||||||| || |||||||||||||||||||||||||| || |||||||||||    
T  53907422 aaaaacatacactcatgagaaatttcctcacactttcattacactaagatatttt 53907476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 93
Target Start/End: Original strand, 53704458 - 53704491
Alignment:
Q  60 aaaaacatactcttatgagaaatttcctcacact 93  Q
    |||||||||| |||||||||||||||||||||||    
T  53704458 aaaaacatacacttatgagaaatttcctcacact 53704491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 71; Significance: 3e-32; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 4 - 114
Target Start/End: Complemental strand, 27262395 - 27262285
Alignment:
Q  4 gaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttcat 103  Q
    |||||||||||| |||||| ||||||||||||||||| |||||||||||||| ||||||||| |  |||||   ||||||||||||||||||||||||||    
T  27262395 gaaatgggttaaatccattaagtttgagagttaggcccattaaggggacttgctataaaaaccttgtcttagaggaaatttcctcacactttcatttcat 27262296  T
Q  104 aagatattttt 114  Q
    |||||||||||    
T  27262295 aagatattttt 27262285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 17367409 - 17367299
Alignment:
Q  3 agaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttca 102  Q
    ||||||||||||||||||||||||  ||| |||||||| ||||||| |||||| ||||||||| ||| ||||||||||||||||||||||||||| | ||    
T  17367409 agaaatgggttaagtccattgagtg-gagggttaggcccattaaggagacttggtataaaaacctacacttatgagaaatttcctcacactttcactcca 17367311  T
Q  103 taagatattttt 114  Q
    ||||||||||||    
T  17367310 taagatattttt 17367299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 36890341 - 36890451
Alignment:
Q  3 agaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttca 102  Q
    ||||||| |||||||||||| |||| ||| |||||||| ||| | |||||||  || |||||| || |||||||||||||||||||||||||||||||||    
T  36890341 agaaatgagttaagtccattaagtt-gagggttaggcccatttatgggacttactacaaaaacctagtcttatgagaaatttcctcacactttcatttca 36890439  T
Q  103 taagatattttt 114  Q
    ||||||||||||    
T  36890440 taagatattttt 36890451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 4 - 113
Target Start/End: Original strand, 4447790 - 4447900
Alignment:
Q  4 gaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttca-tttca 102  Q
    |||||| ||||| |||||| ||||||||||||||||  |||||||||||||||||||||||| |  |||||   |||||||||||||||||||| |||||    
T  4447790 gaaatgagttaaatccattaagtttgagagttaggctcattaaggggacttgatataaaaaccttgtcttagaggaaatttcctcacactttcattttca 4447889  T
Q  103 taagatatttt 113  Q
    |||||||||||    
T  4447890 taagatatttt 4447900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 114
Target Start/End: Complemental strand, 25602615 - 25602506
Alignment:
Q  6 aatgggttaagtccattgagtttgagagttaggcctattaaggggacttga-tataaaaacatactcttatgagaaatttcctcacactttcatttcata 104  Q
    |||||||||| |||||| ||||||||||||||||| |||||||||  || | || |||||| |  |||||   |||||||||||||||||||||||||||    
T  25602615 aatgggttaaatccattaagtttgagagttaggcccattaagggggatttactacaaaaaccttgtcttagaggaaatttcctcacactttcatttcata 25602516  T
Q  105 agatattttt 114  Q
    ||||||||||    
T  25602515 agatattttt 25602506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 180 - 249
Target Start/End: Original strand, 36890519 - 36890588
Alignment:
Q  180 tcaagggttggcagaagagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    |||| |||||| ||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||    
T  36890519 tcaaaggttgggagaagagctagcagcaaaattgaagcctaagctatagagattaacctaactaaggtaa 36890588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 28974447 - 28974393
Alignment:
Q  195 agagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    |||||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  28974447 agagctaggagcaaaattgaagtctaagctagggagattaatctaactaaggtaa 28974393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 271568 - 271514
Alignment:
Q  195 agagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    |||||||||||||||||||||| ||||||||  ||||||||||||||||||||||    
T  271568 agagctaggagcaaaattgaagcctaagctaaggagattaacctaactaaggtaa 271514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 271757 - 271649
Alignment:
Q  3 agaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttca 102  Q
    |||||||||||||||||||| |||| ||| |||||||| ||| | | ||| |  ||||||||| || ||||||||||||||| | |||||||||| ||||    
T  271757 agaaatgggttaagtccattaagtt-gagggttaggcccatttatgagacctactataaaaacctagtcttatgagaaattttcacacactttca-ttca 271660  T
Q  103 taagatatttt 113  Q
    |||||||||||    
T  271659 taagatatttt 271649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 180 - 249
Target Start/End: Complemental strand, 25602439 - 25602370
Alignment:
Q  180 tcaagggttggcagaagagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    |||||| ||||  ||||||||| |||||||||||||| ||||||||| |||||||| |||||||||||||    
T  25602439 tcaaggattgggggaagagctatgagcaaaattgaagcctaagctagggagattaatctaactaaggtaa 25602370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 17367232 - 17367174
Alignment:
Q  180 tcaagggttggcagaagagctaggagcaaaattgaagtctaagctagagagattaaccta 239  Q
    ||||||||||| |||||||||| |||||||||||||| |||||||||||| |||||||||    
T  17367232 tcaagggttgggagaagagctacgagcaaaattgaagcctaagctagaga-attaaccta 17367174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 197 - 249
Target Start/End: Complemental strand, 27262201 - 27262149
Alignment:
Q  197 agctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    |||||||||| ||||||||| ||||||||| |||||||| |||||||||||||    
T  27262201 agctaggagctaaattgaagcctaagctagggagattaatctaactaaggtaa 27262149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 4447981 - 4448035
Alignment:
Q  195 agagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    |||||||| ||||||||||||| |||| |||| |||||||| |||||||||||||    
T  4447981 agagctagaagcaaaattgaagcctaaactagggagattaatctaactaaggtaa 4448035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 22579711 - 22579765
Alignment:
Q  195 agagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    |||||||||||| ||||||||| ||||||||| ||||||||  ||||||||||||    
T  22579711 agagctaggagctaaattgaagcctaagctagggagattaatttaactaaggtaa 22579765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 114
Target Start/End: Original strand, 24570950 - 24571058
Alignment:
Q  4 gaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttcat 103  Q
    ||||| ||||||||||||| ||||| || |||||||| ||| ||||||| |  ||||||||| |  |||||   ||||||||||||||||||||||| |     
T  24570950 gaaataggttaagtccattaagttt-agggttaggcccatttaggggacatcctataaaaaccttatcttagaggaaatttcctcacactttcattt-ac 24571047  T
Q  104 aagatattttt 114  Q
    |||||||||||    
T  24571048 aagatattttt 24571058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 25875770 - 25875823
Alignment:
Q  195 agagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    ||||||| |||||||||||||| ||||||||| ||||||||||| ||||||||||    
T  25875770 agagctacgagcaaaattgaagcctaagctagggagattaacct-actaaggtaa 25875823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 247
Target Start/End: Original strand, 24571141 - 24571193
Alignment:
Q  195 agagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggt 247  Q
    |||||||||||| |||||||||| |||| ||| |||||||| |||||||||||    
T  24571141 agagctaggagctaaattgaagtttaagatagggagattaatctaactaaggt 24571193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 114
Target Start/End: Complemental strand, 28974636 - 28974528
Alignment:
Q  6 aatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttcataa 105  Q
    |||||||||| |||||  || || || |||||||| |||  ||||||||  ||||||||| |  |||||   |||| || ||||||||||||||||||||    
T  28974636 aatgggttaaatccatgaagctttagggttaggcccatttgggggacttactataaaaaccttgtcttagaggaaactttctcacactttcatttcataa 28974537  T
Q  106 gatattttt 114  Q
    |||||||||    
T  28974536 gatattttt 28974528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 113
Target Start/End: Original strand, 31145839 - 31145944
Alignment:
Q  8 tgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcct-cacactttcatttcataag 106  Q
    ||||||||||||||| ||||| ||  ||||||| ||||||||||| |  |||| ||||||  |||||   |||||||||| ||||||||||||| | |||    
T  31145839 tgggttaagtccattaagttttaggcttaggcccattaaggggacatcctatataaacattgtcttagaggaaatttcctacacactttcattt-acaag 31145937  T
Q  107 atatttt 113  Q
    |||||||    
T  31145938 atatttt 31145944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 113
Target Start/End: Complemental strand, 42535142 - 42535088
Alignment:
Q  60 aaaaacatactcttatgagaaatttcctcacactttcatttca-taagatatttt 113  Q
    |||||||| | ||| ||||||||||||||||||||||||| || |||||||||||    
T  42535142 aaaaacatgcacttctgagaaatttcctcacactttcattacattaagatatttt 42535088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 57 - 114
Target Start/End: Original strand, 25875635 - 25875690
Alignment:
Q  57 tataaaaacatactcttatgagaaatttcctcacactttcatttcataagatattttt 114  Q
    |||| |||| |||||||||||||| |||||||||||||||  ||||||||||||||||    
T  25875635 tatataaacctactcttatgagaa-tttcctcacactttc-cttcataagatattttt 25875690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 100
Target Start/End: Original strand, 22579523 - 22579615
Alignment:
Q  8 tgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcattt 100  Q
    ||||||||||||||| ||  | || |||||||| ||| ||||||| |  ||||||||| |  |||||   |||||||||||||||||||||||    
T  22579523 tgggttaagtccattaagccttagggttaggcccatttaggggacatcctataaaaaccttgtcttagaggaaatttcctcacactttcattt 22579615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 11226 - 11321
Alignment:
Q  5 aaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcattt 100  Q
    |||||||||||||||||| ||||||||||||||||| |||| || |||||  ||||||||| ||||||||||||||||||||||||||||||||||    
T  11226 aaatgggttaagtccattaagtttgagagttaggcccattagggagacttagtataaaaacttactcttatgagaaatttcctcacactttcattt 11321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 11417 - 11470
Alignment:
Q  195 agagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggta 248  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  11417 agagctaggagcaaaattgaagcctaagctagagagattaacctaactaaggta 11470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 68; Significance: 2e-30; HSPs: 6)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 61397 - 61287
Alignment:
Q  3 agaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttca 102  Q
    |||||| ||||||||| ||| ||||||||||||| ||| |||||||||| ||||||||||||| |||| |||||| ||||||||||||||||||| ||||    
T  61397 agaaataggttaagtctattaagtttgagagttatgcccattaaggggaattgatataaaaacctactgttatgaaaaatttcctcacactttca-ttca 61299  T
Q  103 taagatattttt 114  Q
    ||||||||||||    
T  61298 taagatattttt 61287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 192 - 249
Target Start/End: Original strand, 70470 - 70527
Alignment:
Q  192 agaagagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    ||||||||||||| ||||||||||| |||| |||||||||||||||||||||||||||    
T  70470 agaagagctaggatcaaaattgaagcctaacctagagagattaacctaactaaggtaa 70527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 180 - 245
Target Start/End: Original strand, 79723 - 79788
Alignment:
Q  180 tcaagggttggcagaagagctaggagcaaaattgaagtctaagctagagagattaacctaactaag 245  Q
    ||||||||||  |||||||||||||| ||||||||||  |||||||||||||||||||||||||||    
T  79723 tcaagggttgagagaagagctaggagtaaaattgaagcataagctagagagattaacctaactaag 79788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 180 - 249
Target Start/End: Complemental strand, 61221 - 61152
Alignment:
Q  180 tcaagggttggcagaagagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    ||||| ||||| ||||||| |||||||||||||||||  ||||||||||| |||||| ||||||||||||    
T  61221 tcaagagttgggagaagagataggagcaaaattgaagcttaagctagagaaattaacttaactaaggtaa 61152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 72 - 114
Target Start/End: Original strand, 70349 - 70391
Alignment:
Q  72 ttatgagaaatttcctcacactttcatttcataagatattttt 114  Q
    |||||||||||||||||||||||||| ||||||||||||||||    
T  70349 ttatgagaaatttcctcacactttcacttcataagatattttt 70391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 79546 - 79656
Alignment:
Q  3 agaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttca 102  Q
    |||||||||||||||||||| |||| ||| ||||||||||||   | |||    |||  |||| || | |||||||||||||||||||| ||||| ||||    
T  79546 agaaatgggttaagtccattaagtt-gagggttaggcctatttgtgagacacactatttaaacctagtattatgagaaatttcctcacattttcacttca 79644  T
Q  103 taagatattttt 114  Q
    ||||||||||||    
T  79645 taagatattttt 79656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 68; Significance: 2e-30; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 3895613 - 3895503
Alignment:
Q  3 agaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttca 102  Q
    |||||||||||||||||||| |||  ||| |||||||| | ||||| |||||  ||||||||| ||||||||||||||||||||||||||||||||||||    
T  3895613 agaaatgggttaagtccattaagtg-gagggttaggcccaataaggagacttagtataaaaacctactcttatgagaaatttcctcacactttcatttca 3895515  T
Q  103 taagatattttt 114  Q
    ||||||||||||    
T  3895514 taagatattttt 3895503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 113
Target Start/End: Original strand, 45451824 - 45451934
Alignment:
Q  3 agaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttca 102  Q
    |||||||||||||||||||| |||  || |||||||||  ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||    
T  45451824 agaaatgggttaagtccattaagtg-gacagttaggccctttaaggggacttgatataaaaacctagtcttatgagaaatttcctcacactttcatttca 45451922  T
Q  103 -taagatatttt 113  Q
     |||||||||||    
T  45451923 ctaagatatttt 45451934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 180 - 249
Target Start/End: Original strand, 26069441 - 26069510
Alignment:
Q  180 tcaagggttggcagaagagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26069441 tcaagggttgggagaagagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 26069510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 180 - 249
Target Start/End: Original strand, 26070099 - 26070168
Alignment:
Q  180 tcaagggttggcagaagagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26070099 tcaagggttgggagaagagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 26070168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 180 - 249
Target Start/End: Original strand, 26093886 - 26093955
Alignment:
Q  180 tcaagggttggcagaagagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26093886 tcaagggttgggagaagagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 26093955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 114
Target Start/End: Complemental strand, 11288007 - 11287897
Alignment:
Q  4 gaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttcat 103  Q
    ||||||||||||||||| | ||||||||||||||||| |||||||| ||||| ||||||||  |  |||||   ||||||||||||||||||||||||||    
T  11288007 gaaatgggttaagtccaataagtttgagagttaggcccattaagggcacttgctataaaaatcttgtcttagaggaaatttcctcacactttcatttcat 11287908  T
Q  104 aagatattttt 114  Q
    |||||||||||    
T  11287907 aagatattttt 11287897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 44865818 - 44865709
Alignment:
Q  3 agaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttca 102  Q
    ||||||| |||||||||||| |||| ||| |||||||| |||||||||||||| ||||||||| |||  |||||||||||||||||||||||||| |||     
T  44865818 agaaatgagttaagtccattaagtt-gagggttaggcccattaaggggacttggtataaaaacctacatttatgagaaatttcctcacactttca-ttct 44865721  T
Q  103 taagatattttt 114  Q
    ||||||||||||    
T  44865720 taagatattttt 44865709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 180 - 249
Target Start/End: Complemental strand, 144052 - 143984
Alignment:
Q  180 tcaagggttggcagaagagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  144052 tcaagggttgggagaagagctaggagcaaaattgaagcctaagctagagagattaacct-actaaggtaa 143984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 42 - 114
Target Start/End: Complemental strand, 12759541 - 12759468
Alignment:
Q  42 attaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttca-taagatattttt 114  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||| ||||||||||||    
T  12759541 attaaggggacttgatataaaaacctactcttatgaaaaatttcctcacacttttatttcactaagatattttt 12759468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 180 - 249
Target Start/End: Original strand, 13862766 - 13862835
Alignment:
Q  180 tcaagggttggcagaagagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    |||| |||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  13862766 tcaatggttgggagaagagctaggagcaaaattgaagcctaagttagagagattaacctaactaaggtaa 13862835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 33 - 114
Target Start/End: Original strand, 15822119 - 15822199
Alignment:
Q  33 gttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttcataagatattttt 114  Q
    |||||||| ||||||| |||||||||||||||  ||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  15822119 gttaggcccattaaggagacttgatataaaaatctacacttatgagaaatttcctcacactttca-ttcataagatattttt 15822199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 180 - 249
Target Start/End: Original strand, 15822266 - 15822334
Alignment:
Q  180 tcaagggttggcagaagagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  15822266 tcaagggttgggagaagagctaggagcaaaattaaagtctaagctagagagattaacct-actaaggtaa 15822334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 180 - 249
Target Start/End: Complemental strand, 47290196 - 47290127
Alignment:
Q  180 tcaagggttggcagaagagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    ||||||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||| ||||||||    
T  47290196 tcaagggttgggagaagagcttggagcaaaattgaagtctaaactagagagattaacctaattaaggtaa 47290127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 12369496 - 12369606
Alignment:
Q  3 agaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttca 102  Q
    |||||||||||||||||||| |||| ||| ||||| || |||   | ||| |  ||||||||| ||||||||||||||||||||||||| ||||||||||    
T  12369496 agaaatgggttaagtccattaagtt-gagggttagacccatttgtgagacatactataaaaacctactcttatgagaaatttcctcacattttcatttca 12369594  T
Q  103 taagatattttt 114  Q
    ||||||||||||    
T  12369595 taagatattttt 12369606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 47290372 - 47290263
Alignment:
Q  3 agaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttca 102  Q
    |||||||||||||||||||| ||| | ||||||||||| |||||||  ||||| ||||||||| ||| ||  ||||||||||| ||||||||||| ||||    
T  47290372 agaaatgggttaagtccattaagtgt-agagttaggcccattaaggaaacttggtataaaaacctacactattgagaaatttcttcacactttca-ttca 47290275  T
Q  103 taagatattttt 114  Q
    ||||||||||||    
T  47290274 taagatattttt 47290263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 12759387 - 12759333
Alignment:
Q  195 agagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  12759387 agagctaggagcaaaattgaagtctaagctagggagattaacctaactaaggtaa 12759333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 180 - 249
Target Start/End: Original strand, 12369673 - 12369742
Alignment:
Q  180 tcaagggttggcagaagagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    ||||||||||| ||||||  ||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  12369673 tcaagggttgggagaagatttaggagcgaaattgaagcctaagctagagagattaacctaactaaggtaa 12369742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 11287815 - 11287761
Alignment:
Q  195 agagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    |||||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  11287815 agagctaggagcaaaattgaagtctaagctagggagattaatctaactaaggtaa 11287761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 45452016 - 45452070
Alignment:
Q  195 agagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  45452016 agagctaggagcaaaattgaagcctaagctatagagattaacctaactaaggtaa 45452070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 26069264 - 26069373
Alignment:
Q  3 agaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttca 102  Q
    ||||||||||||| || ||| |||| ||| |||||||| ||| | |||||||  || |||||  || |||||||||||||||||||||||||||| ||||    
T  26069264 agaaatgggttaaatctattaagtt-gagggttaggcccatttatgggacttactacaaaaatctagtcttatgagaaatttcctcacactttca-ttca 26069361  T
Q  103 taagatattttt 114  Q
    ||||||||||||    
T  26069362 taagatattttt 26069373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 26069922 - 26070031
Alignment:
Q  3 agaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttca 102  Q
    ||||||||||||| || ||| |||| ||| |||||||| ||| | |||||||  || |||||  || |||||||||||||||||||||||||||| ||||    
T  26069922 agaaatgggttaaatctattaagtt-gagggttaggcccatttatgggacttactacaaaaatctagtcttatgagaaatttcctcacactttca-ttca 26070019  T
Q  103 taagatattttt 114  Q
    ||||||||||||    
T  26070020 taagatattttt 26070031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 26093709 - 26093818
Alignment:
Q  3 agaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttca 102  Q
    ||||||||||||| || ||| |||| ||| |||||||| ||| | |||||||  || |||||  || |||||||||||||||||||||||||||| ||||    
T  26093709 agaaatgggttaaatctattaagtt-gagggttaggcccatttatgggacttactacaaaaatctagtcttatgagaaatttcctcacactttca-ttca 26093806  T
Q  103 taagatattttt 114  Q
    ||||||||||||    
T  26093807 taagatattttt 26093818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 44865628 - 44865575
Alignment:
Q  195 agagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  44865628 agagctaggagcaaaattgaagcctaagctagagagattaacct-actaaggtaa 44865575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 114
Target Start/End: Original strand, 16569665 - 16569773
Alignment:
Q  6 aatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttcataa 105  Q
    |||||||||| |||||| || || || |||||||| ||| ||||||| |  |||||||||    |||||   ||||||||||||||||||||||||||||    
T  16569665 aatgggttaaatccattaagctttagggttaggcccatttaggggacatactataaaaaccatgtcttagaggaaatttcctcacactttcatttcataa 16569764  T
Q  106 gatattttt 114  Q
    |||||||||    
T  16569765 gatattttt 16569773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 114
Target Start/End: Complemental strand, 16595997 - 16595889
Alignment:
Q  6 aatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttcataa 105  Q
    |||||||||| |||||| || || || |||||||| ||| ||||||| |  |||||||||    |||||   ||||||||||||||||||||||||||||    
T  16595997 aatgggttaaatccattaagctttagggttaggcccatttaggggacatactataaaaaccatgtcttagaggaaatttcctcacactttcatttcataa 16595898  T
Q  106 gatattttt 114  Q
    |||||||||    
T  16595897 gatattttt 16595889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 12247968 - 12248022
Alignment:
Q  195 agagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    |||| ||||||||||||||||| ||||||||| |||||||| |||||||||||||    
T  12247968 agaggtaggagcaaaattgaagcctaagctagggagattaatctaactaaggtaa 12248022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 3895421 - 3895369
Alignment:
Q  196 gagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    ||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||    
T  3895421 gagctaggagcaaaattgaagcctaagctagggagattaacct-actaaggtaa 3895369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 57 - 113
Target Start/End: Complemental strand, 35095351 - 35095294
Alignment:
Q  57 tataaaaacatactcttatgagaaatttcctcacactttcatttca-taagatatttt 113  Q
    |||| |||||||||||||||||||||||||||||||| ||||| || |||||||||||    
T  35095351 tatataaacatactcttatgagaaatttcctcacactatcattacactaagatatttt 35095294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 114
Target Start/End: Original strand, 12247850 - 12247886
Alignment:
Q  78 gaaatttcctcacactttcatttcataagatattttt 114  Q
    ||||||||||||||||||||||||| |||||||||||    
T  12247850 gaaatttcctcacactttcatttcacaagatattttt 12247886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 16569854 - 16569908
Alignment:
Q  195 agagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    |||||||||||| |||||||||  |||||||| |||||||| ||||| |||||||    
T  16569854 agagctaggagctaaattgaagcataagctagggagattaatctaacaaaggtaa 16569908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 16595808 - 16595754
Alignment:
Q  195 agagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    |||||||||||| |||||||||  |||||||| |||||||| ||||| |||||||    
T  16595808 agagctaggagctaaattgaagcataagctagggagattaatctaacaaaggtaa 16595754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 113
Target Start/End: Original strand, 39046343 - 39046397
Alignment:
Q  60 aaaaacatactcttatgagaaatttcctcacactttcatttca-taagatatttt 113  Q
    |||||||||| || ||||||||||||| |||||||||||| || |||||||||||    
T  39046343 aaaaacatacactcatgagaaatttccacacactttcattacactaagatatttt 39046397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 113
Target Start/End: Complemental strand, 144172 - 144118
Alignment:
Q  57 tataaaaacatactcttatgagaaatttcctcacactttcatttcataagatatttt 113  Q
    |||| |||| |||||||||||||| |||||||||||||||  |||||||||||||||    
T  144172 tatataaacctactcttatgagaa-tttcctcacactttc-cttcataagatatttt 144118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 68; Significance: 2e-30; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 21718819 - 21718708
Alignment:
Q  3 agaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttca 102  Q
    ||||||||||||| ||||||  | || ||||||||||| |||||||||||||||||||||||| | ||||||   |||||||||||||||||||||||||    
T  21718819 agaaatgggttaaatccattagggttcagagttaggcccattaaggggacttgatataaaaaccttctcttagaggaaatttcctcacactttcatttca 21718720  T
Q  103 taagatattttt 114  Q
    ||||||||||||    
T  21718719 taagatattttt 21718708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 35522006 - 35522118
Alignment:
Q  3 agaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttca-tttc 101  Q
    ||||||| |||||||||||| ||||||||||||||||| ||||||||||||| |||||||||| |  |||||   |||||||||||||||||||| ||||    
T  35522006 agaaatgagttaagtccattaagtttgagagttaggcccattaaggggacttaatataaaaaccttgtcttagaggaaatttcctcacactttcattttc 35522105  T
Q  102 ataagatattttt 114  Q
    |||||||||||||    
T  35522106 ataagatattttt 35522118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 49968240 - 49968130
Alignment:
Q  3 agaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttca 102  Q
    |||||||||||||||||| | |||  |||||||||||| |||||||||||||| ||||||||| ||| ||||||||||||||||||||||||||||| ||    
T  49968240 agaaatgggttaagtccactaagtg-gagagttaggcccattaaggggacttggtataaaaacctacacttatgagaaatttcctcacactttcattaca 49968142  T
Q  103 -taagatatttt 113  Q
     |||||||||||    
T  49968141 ctaagatatttt 49968130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 180 - 249
Target Start/End: Complemental strand, 35055170 - 35055101
Alignment:
Q  180 tcaagggttggcagaagagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    ||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  35055170 tcaagggttgggagaagatctaggagcaaaattgaagcctaagctagagagattaacctaactaaggtaa 35055101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 22402766 - 22402877
Alignment:
Q  3 agaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttca 102  Q
    ||||||||||| |||||||| |||| ||| |||||||| |||||||||||||| ||||||||| |||  ||||||||||||| || ||||||||||||||    
T  22402766 agaaatgggttgagtccattaagtt-gagggttaggcccattaaggggacttggtataaaaacctacatttatgagaaattttcttacactttcatttca 22402864  T
Q  103 -taagatattttt 114  Q
     ||||||||||||    
T  22402865 ctaagatattttt 22402877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 180 - 249
Target Start/End: Original strand, 22402943 - 22403012
Alignment:
Q  180 tcaagggttggcagaagagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    ||||||||||| ||||||| ||||||||||||| ||| ||||| ||||||||||||||||||||||||||    
T  22402943 tcaagggttggaagaagagttaggagcaaaattaaagcctaaggtagagagattaacctaactaaggtaa 22403012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 27329420 - 27329531
Alignment:
Q  3 agaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttca 102  Q
    ||||||||||||| |||||| |||||||||||||||||  ||||||  ||||  || |||| | |  |||||   |||||||||||||||||||||||||    
T  27329420 agaaatgggttaaatccattaagtttgagagttaggcccgttaaggaaacttactacaaaagccttgtcttagaggaaatttcctcacactttcatttca 27329519  T
Q  103 taagatattttt 114  Q
    ||||||||||||    
T  27329520 taagatattttt 27329531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 180 - 249
Target Start/End: Complemental strand, 20346437 - 20346369
Alignment:
Q  180 tcaagggttggcagaagagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    ||||||||| | ||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||    
T  20346437 tcaagggttaggagaagagctaggagcaaaattgaagcctaagctagggagattaacct-actaaggtaa 20346369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 180 - 249
Target Start/End: Complemental strand, 49968063 - 49967995
Alignment:
Q  180 tcaagggttggcagaagagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    ||||| ||||| ||||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||    
T  49968063 tcaagagttgggagaagagctagaagcaaaattgaagtctaaggtagagagattaacct-actaaggtaa 49967995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 192 - 249
Target Start/End: Original strand, 27329611 - 27329668
Alignment:
Q  192 agaagagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    |||||||||||||| |||||||||| | || |||||||||||||||||||||||||||    
T  27329611 agaagagctaggagtaaaattgaagcccaatctagagagattaacctaactaaggtaa 27329668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 57 - 114
Target Start/End: Complemental strand, 35055292 - 35055236
Alignment:
Q  57 tataaaaacatactcttatgagaaatttcctcacactttcatttcataagatattttt 114  Q
    ||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  35055292 tataaaaacctactcttttgagaaatttcctcacactttca-ttcataagatattttt 35055236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 60 - 113
Target Start/End: Original strand, 9783778 - 9783832
Alignment:
Q  60 aaaaacatactcttatgagaaatttcctcacactttcatttca-taagatatttt 113  Q
    |||||| ||| |||||||||||||||||||||||||||||||| |||||||||||    
T  9783778 aaaaacctacacttatgagaaatttcctcacactttcatttcactaagatatttt 9783832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 35522200 - 35522254
Alignment:
Q  195 agagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    |||||||||||||||||||||| ||||||||  |||||||| |||||||||||||    
T  35522200 agagctaggagcaaaattgaagcctaagctaaggagattaatctaactaaggtaa 35522254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 57 - 114
Target Start/End: Complemental strand, 41212556 - 41212498
Alignment:
Q  57 tataaaaacatactcttatgagaaatttcctcacactttcatttca-taagatattttt 114  Q
    |||| ||||||||||| |||||||||||||||||||||||||| || ||||||||||||    
T  41212556 tatataaacatactctcatgagaaatttcctcacactttcattacactaagatattttt 41212498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 20346612 - 20346505
Alignment:
Q  3 agaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttca 102  Q
    |||||||||||||||||||| || | ||| |||||||| | ||||| |||||  ||| ||||| |||||||||||| ||||||| |||||||||  ||||    
T  20346612 agaaatgggttaagtccattaag-tggagggttaggcccaataaggagacttagtat-aaaacctactcttatgag-aatttccacacactttc-cttca 20346517  T
Q  103 taagatattttt 114  Q
    ||||||||||||    
T  20346516 taagatattttt 20346505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 67; Significance: 8e-30; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 4 - 114
Target Start/End: Complemental strand, 23279 - 23171
Alignment:
Q  4 gaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttcat 103  Q
    ||||||| ||||||||||| |||| |||||||||||| ||||||| |||||| ||||||||| ||| ||||||||||||||||||||||||||| |||||    
T  23279 gaaatggattaagtccattaagtt-gagagttaggcccattaaggagacttggtataaaaacctacacttatgagaaatttcctcacactttca-ttcat 23182  T
Q  104 aagatattttt 114  Q
    |||||||||||    
T  23181 aagatattttt 23171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 180 - 249
Target Start/End: Complemental strand, 23105 - 23036
Alignment:
Q  180 tcaagggttggcagaagagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    |||||| |||| ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  23105 tcaaggattgggagaagagctaggagcaaaattgaagcctaagctaaagagattaacctaactaaggtaa 23036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 5336 - 5431
Alignment:
Q  3 agaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatt 99  Q
    |||||||||||||||||||| | || ||| |||||||| ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  5336 agaaatgggttaagtccattaactt-gagggttaggcccattaaggagacttgatataaaaacctactcttatgagaaatttcctcacactttcatt 5431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 180 - 245
Target Start/End: Original strand, 5510 - 5575
Alignment:
Q  180 tcaagggttggcagaagagctaggagcaaaattgaagtctaagctagagagattaacctaactaag 245  Q
    ||||||||||| ||||||| ||||||||||||||||| ||||||||||| || |||||||||||||    
T  5510 tcaagggttgggagaagagttaggagcaaaattgaagcctaagctagagggagtaacctaactaag 5575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 64; Significance: 5e-28; HSPs: 4)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 1905 - 1795
Alignment:
Q  3 agaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttca 102  Q
    |||||||||||||||||||| |||||||| |||||||| |||   | ||| |  ||||||||| ||||||||||||||||||||||||||||||||||||    
T  1905 agaaatgggttaagtccatt-agtttgagggttaggcccatttgtgagacatactataaaaacctactcttatgagaaatttcctcacactttcatttca 1807  T
Q  103 taagatattttt 114  Q
    ||||||||||||    
T  1806 taagatattttt 1795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 180 - 246
Target Start/End: Complemental strand, 1729 - 1663
Alignment:
Q  180 tcaagggttggcagaagagctaggagcaaaattgaagtctaagctagagagattaacctaactaagg 246  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  1729 tcaagggttgggagaagagctaggagcaaaattgaagcctaagctagagagattaacctaactaagg 1663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 11312 - 11407
Alignment:
Q  3 agaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatt 99  Q
    |||||||||||||||||||| |||  ||| |||||||| ||||||| |||||| ||||||||| ||| |||||||||||||||||||||||||||||    
T  11312 agaaatgggttaagtccattaagtg-gagggttaggcccattaaggagacttggtataaaaacctacacttatgagaaatttcctcacactttcatt 11407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 197 - 249
Target Start/End: Original strand, 11504 - 11555
Alignment:
Q  197 agctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  11504 agctaggagcaaaattgaagcctaagctagagagattaacct-actaaggtaa 11555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 62; Significance: 7e-27; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 180 - 249
Target Start/End: Complemental strand, 38712 - 38643
Alignment:
Q  180 tcaagggttggcagaagagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  38712 tcaagggttgggagaagagctaggagcaaaattgaagcctaagctagagagattaacctaactaaggtaa 38643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 57 - 114
Target Start/End: Complemental strand, 38834 - 38779
Alignment:
Q  57 tataaaaacatactcttatgagaaatttcctcacactttcatttcataagatattttt 114  Q
    ||||||||| |||||||||||| |||||||||||||||||  ||||||||||||||||    
T  38834 tataaaaacctactcttatgag-aatttcctcacactttc-cttcataagatattttt 38779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 62; Significance: 7e-27; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 29 - 102
Target Start/End: Complemental strand, 21907263 - 21907190
Alignment:
Q  29 gagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttca 102  Q
    |||||||||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||    
T  21907263 gagagttaggcccattaaggggacttgatataaaaacctagtcttatgagaaatttcctcacactttcatttca 21907190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 4 - 113
Target Start/End: Original strand, 24182791 - 24182900
Alignment:
Q  4 gaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttcat 103  Q
    |||||||||||| |||||| | ||||||||||||||| |||||||||||||||||||||||| |  |||||   |||||||||||||||||||| |||||    
T  24182791 gaaatgggttaaatccattaaatttgagagttaggcccattaaggggacttgatataaaaaccttgtcttagaggaaatttcctcacactttcacttcat 24182890  T
Q  104 aagatatttt 113  Q
    || |||||||    
T  24182891 aaaatatttt 24182900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 20712665 - 20712555
Alignment:
Q  3 agaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttca 102  Q
    |||||||||||||||||||| |||  ||| |||||||| | ||||| |||||  | ||||||| ||| ||||||||||||||||||||||||||||||||    
T  20712665 agaaatgggttaagtccattaagtg-gagggttaggccaaataaggagacttagtctaaaaacctacacttatgagaaatttcctcacactttcatttca 20712567  T
Q  103 taagatattttt 114  Q
    ||||||||||||    
T  20712566 taagatattttt 20712555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 21397681 - 21397572
Alignment:
Q  3 agaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttca 102  Q
    |||||||||||||||||||| |||  ||| |||||||| ||||||| |||||  ||||||||| ||| |||||||||||||||||||||||||||||| |    
T  21397681 agaaatgggttaagtccattaagtg-gagggttaggcccattaaggagactttgtataaaaacctacacttatgagaaatttcctcacactttcattt-a 21397584  T
Q  103 taagatattttt 114  Q
    ||||||||||||    
T  21397583 taagatattttt 21397572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 180 - 249
Target Start/End: Complemental strand, 20712490 - 20712421
Alignment:
Q  180 tcaagggttggcagaagagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  20712490 tcaagggttgggagaagagctaggagcaaaattgaagcctaagctagagaaattaacctaactaaggtaa 20712421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 114
Target Start/End: Original strand, 11336842 - 11336951
Alignment:
Q  4 gaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttcat 103  Q
    |||||||||||| |||||| |||| ||| |||||||| |||||||||||||| ||||||||| |  |||||   ||||||||| ||||||||||||||||    
T  11336842 gaaatgggttaaatccattaagtt-gagggttaggcccattaaggggacttgctataaaaaccttgtcttagaggaaatttccacacactttcatttcat 11336940  T
Q  104 aagatattttt 114  Q
    |||||||||||    
T  11336941 aagatattttt 11336951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 180 - 249
Target Start/End: Complemental strand, 21397506 - 21397437
Alignment:
Q  180 tcaagggttggcagaagagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    ||||||||||| |||||| ||||||| |||||||||| ||||| ||||||||||||||||||||||||||    
T  21397506 tcaagggttgggagaagatctaggagaaaaattgaagcctaagatagagagattaacctaactaaggtaa 21397437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 180 - 249
Target Start/End: Original strand, 21646575 - 21646643
Alignment:
Q  180 tcaagggttggcagaagagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    ||||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||| ||||||||||    
T  21646575 tcaagggttgggagaagagctaggagcaaaattgaagcctaaactagagagattaacct-actaaggtaa 21646643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 180 - 249
Target Start/End: Original strand, 1168039 - 1168107
Alignment:
Q  180 tcaagggttggcagaagagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||| |||||||| || ||||||||||    
T  1168039 tcaagggttgggagaagagctaggagcaaaattgaagcctaagctagggagattaatct-actaaggtaa 1168107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 180 - 249
Target Start/End: Complemental strand, 21907112 - 21907043
Alignment:
Q  180 tcaagggttggcagaagagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    ||||||||| | ||||||||||||||||||||||||| |||||||||||||| |||  ||||||||||||    
T  21907112 tcaagggtttggagaagagctaggagcaaaattgaagcctaagctagagagagtaatataactaaggtaa 21907043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 114
Target Start/End: Original strand, 21646403 - 21646507
Alignment:
Q  7 atgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttcataag 106  Q
    ||||| |||||||||| |||  ||| |||||||| | ||||| ||||| |||||||||| |||||||||||| |||||||||||||||||  ||||||||    
T  21646403 atgggataagtccattaagtg-gagggttaggcccaataaggagacttaatataaaaacctactcttatgag-aatttcctcacactttc-cttcataag 21646499  T
Q  107 atattttt 114  Q
    ||||||||    
T  21646500 atattttt 21646507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 22662336 - 22662448
Alignment:
Q  3 agaaatgggttaagtccattgagtttgagagttaggcctattaagggg--acttgatataaaaacatactcttatgagaaatttcctcacactttcattt 100  Q
    |||||||||||||||||||| ||||| || |||||||| ||| |||||  || |  ||||||| | || |||||||||||||||||  ||||||||||||    
T  22662336 agaaatgggttaagtccattaagttt-agggttaggcccatttagggggaacatcctataaaagcctagtcttatgagaaatttccatacactttcattt 22662434  T
Q  101 cataagatattttt 114  Q
    ||||| ||||||||    
T  22662435 cataatatattttt 22662448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 22662530 - 22662584
Alignment:
Q  195 agagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    ||||||||||| |||||||||||||||||||| |||||||| |||||||||||||    
T  22662530 agagctaggagaaaaattgaagtctaagctagggagattaatctaactaaggtaa 22662584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 23466834 - 23466780
Alignment:
Q  195 agagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    |||||||||||||||||||||| ||||||||| |||||||| |||||||||||||    
T  23466834 agagctaggagcaaaattgaagcctaagctagggagattaatctaactaaggtaa 23466780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 24182980 - 24183034
Alignment:
Q  195 agagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    |||||||||||||||||||||| ||||||||| |||||||| |||||||||||||    
T  24182980 agagctaggagcaaaattgaagcctaagctagggagattaatctaactaaggtaa 24183034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 114
Target Start/End: Complemental strand, 19406103 - 19406019
Alignment:
Q  30 agagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttcataagatattttt 114  Q
    ||||||||||| |||||||||||||  ||||||||| |  |||||   |||||||||||||| ||||||||||||| ||||||||    
T  19406103 agagttaggcccattaaggggacttactataaaaaccttgtcttagaggaaatttcctcacattttcatttcataaaatattttt 19406019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 1167863 - 1167971
Alignment:
Q  3 agaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttca 102  Q
    |||||||||||||||||||| || | ||| |||| ||| | ||||| ||| |  ||||||||| |||||||||||| |||||||||||||||||  ||||    
T  1167863 agaaatgggttaagtccattaag-tggagggttaagcccaataaggagacctagtataaaaacctactcttatgag-aatttcctcacactttc-cttca 1167959  T
Q  103 taagatattttt 114  Q
    ||||||||||||    
T  1167960 taagatattttt 1167971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 19405938 - 19405884
Alignment:
Q  195 agagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    |||||||||||| ||||||||| ||||||||| |||||||| |||||||||||||    
T  19405938 agagctaggagctaaattgaagcctaagctagggagattaatctaactaaggtaa 19405884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 4865658 - 4865606
Alignment:
Q  196 gagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    ||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||    
T  4865658 gagctaggagcaaaattgaagcctaagctagggagattaacct-actaaggtaa 4865606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 4865849 - 4865738
Alignment:
Q  3 agaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttca 102  Q
    |||||||||||| ||||||| |||  ||| |||||||| | ||||  |||||  |  |||||| ||||||||||||||| |||| |||||||||||||||    
T  4865849 agaaatgggttaggtccattaagtg-gagggttaggcccaataagtagacttagtccaaaaacctactcttatgagaaaattccacacactttcatttca 4865751  T
Q  103 -taagatattttt 114  Q
     ||||||||||||    
T  4865750 ctaagatattttt 4865738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 11337034 - 11337088
Alignment:
Q  195 agagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    ||||||||||||||||||||||  | |||||| |||||||| |||||||||||||    
T  11337034 agagctaggagcaaaattgaagcttgagctagggagattaatctaactaaggtaa 11337088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 28261913 - 28261860
Alignment:
Q  195 agagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    |||||||||||||||||||||| ||||||||  ||||||||||| ||||||||||    
T  28261913 agagctaggagcaaaattgaagcctaagctaaggagattaacct-actaaggtaa 28261860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 57 - 114
Target Start/End: Complemental strand, 28262050 - 28261995
Alignment:
Q  57 tataaaaacatactcttatgagaaatttcctcacactttcatttcataagatattttt 114  Q
    ||||||||| |||||||||||| |||||||||||| ||||  ||||||||||||||||    
T  28262050 tataaaaacctactcttatgag-aatttcctcacattttc-cttcataagatattttt 28261995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 4 - 114
Target Start/End: Complemental strand, 34255 - 34144
Alignment:
Q  4 gaaatgggttaagtccattgagtttgagagttaggcctattaagg-ggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttca 102  Q
    |||||||||||| |||||| ||||||||||||||||| ||||||| ||||||  ||||||||| |  |||||   |||||||||||||||||||||||||    
T  34255 gaaatgggttaaatccattaagtttgagagttaggcccattaaggcggacttactataaaaaccttgtcttagaggaaatttcctcacactttcatttca 34156  T
Q  103 taagatattttt 114  Q
    ||||||||||||    
T  34155 taagatattttt 34144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 197 - 249
Target Start/End: Complemental strand, 34059 - 34007
Alignment:
Q  197 agctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    |||||||||| ||||||||| ||||||||| |||||||| |||||||||||||    
T  34059 agctaggagctaaattgaagcctaagctagggagattaatctaactaaggtaa 34007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 113
Target Start/End: Original strand, 24383 - 24493
Alignment:
Q  3 agaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttca 102  Q
    |||||||||||||||||||| |||  ||| |||||||| | ||||| |||||  ||||||||| ||||||||||||||||||||||||||||||||||||    
T  24383 agaaatgggttaagtccattaagtg-gagggttaggcccaataaggagacttagtataaaaacctactcttatgagaaatttcctcacactttcatttca 24481  T
Q  103 -taagatatttt 113  Q
     |||||||||||    
T  24482 ctaagatatttt 24493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 180 - 249
Target Start/End: Original strand, 24561 - 24630
Alignment:
Q  180 tcaagggttggcagaagagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    ||||||||||| |||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  24561 tcaagggttgggagaagagctaggagcaaaattgaagcataagctagagagattaacctaactaaggtaa 24630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 59; Significance: 4e-25; HSPs: 2)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 4 - 114
Target Start/End: Complemental strand, 9577 - 9467
Alignment:
Q  4 gaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttcat 103  Q
    |||||||||||| |||||| || || | ||||||||| |||||||||||||| ||||||||| |  |||||   ||||||||||||||||||||||||||    
T  9577 gaaatgggttaaatccattaagctttatagttaggcccattaaggggacttgctataaaaaccttatcttagaggaaatttcctcacactttcatttcat 9478  T
Q  104 aagatattttt 114  Q
    |||||||||||    
T  9477 aagatattttt 9467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 9385 - 9332
Alignment:
Q  196 gagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  9385 gagctaggagcaaaattgaagtctaagctagggagattaatctaactaaggtaa 9332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 58; Significance: 2e-24; HSPs: 4)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 180 - 249
Target Start/End: Complemental strand, 48557 - 48489
Alignment:
Q  180 tcaagggttggcagaagagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  48557 tcaagggttgggagaagagctaggagcaaaattgaagtctaagctagagagattaacct-actaaggtaa 48489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 180 - 249
Target Start/End: Complemental strand, 62005 - 61937
Alignment:
Q  180 tcaagggttggcagaagagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  62005 tcaagggttgggagaagagctaggagcaaaattgaagtctaagctagagagattaacct-actaaggtaa 61937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 48731 - 48623
Alignment:
Q  3 agaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttca 102  Q
    |||||||||||||||||||| || | ||| |||||||| | ||||| |||||  ||| ||||| |||||||||||| | |||||||||||||||  ||||    
T  48731 agaaatgggttaagtccattaag-tggagggttaggcccaataaggagacttagtatgaaaacctactcttatgag-agtttcctcacactttc-cttca 48635  T
Q  103 taagatattttt 114  Q
     |||||||||||    
T  48634 caagatattttt 48623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 62179 - 62071
Alignment:
Q  3 agaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttca 102  Q
    |||||||||||||||||||| || | ||| |||||||| | ||||| |||||  ||| ||||| |||||||||||| | |||||||||||||||  ||||    
T  62179 agaaatgggttaagtccattaag-tggagggttaggcccaataaggagacttagtatgaaaacctactcttatgag-agtttcctcacactttc-cttca 62083  T
Q  103 taagatattttt 114  Q
     |||||||||||    
T  62082 caagatattttt 62071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 58; Significance: 2e-24; HSPs: 4)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 180 - 249
Target Start/End: Original strand, 254649 - 254717
Alignment:
Q  180 tcaagggttggcagaagagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  254649 tcaagggttgggagaagagctaggagcaaaattgaagtctaagctagagagattaacct-actaaggtaa 254717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 180 - 249
Target Start/End: Original strand, 261255 - 261323
Alignment:
Q  180 tcaagggttggcagaagagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  261255 tcaagggttgggagaagagctaggagcaaaattgaagactaagctagagagattaacct-actaaggtaa 261323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 33 - 114
Target Start/End: Original strand, 254502 - 254581
Alignment:
Q  33 gttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttcataagatattttt 114  Q
    |||||||| | ||||| |||||  ||||||||| ||||||| |||||| |||||||||||||||  ||||||||||| ||||    
T  254502 gttaggcccaataaggagacttagtataaaaacctactcttttgagaa-tttcctcacactttc-cttcataagatagtttt 254581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 33 - 114
Target Start/End: Original strand, 261108 - 261187
Alignment:
Q  33 gttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttcataagatattttt 114  Q
    |||||||| | ||||| |||||  ||||||||| ||||||| |||||| |||||||||||||||  ||||||||||| ||||    
T  261108 gttaggcccaataaggagacttagtataaaaacctactcttttgagaa-tttcctcacactttc-cttcataagatagtttt 261187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0740 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0740
Description:

Target: scaffold0740; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 4871 - 4763
Alignment:
Q  3 agaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttca 102  Q
    |||||||| ||||||||||| |||  ||| |||||||||| ||||| |||||| |||||||||||||||||||||| |||||||||||||||||  ||||    
T  4871 agaaatggtttaagtccattaagtg-gagggttaggcctaataaggagacttggtataaaaacatactcttatgag-aatttcctcacactttc-cttca 4775  T
Q  103 taagatattttt 114  Q
    ||||||||||||    
T  4774 taagatattttt 4763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0740; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 4681 - 4628
Alignment:
Q  195 agagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    |||||||||||||||||||||| ||||||||| |||||||| || ||||||||||    
T  4681 agagctaggagcaaaattgaagcctaagctagggagattaatct-actaaggtaa 4628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0673 (Bit Score: 56; Significance: 3e-23; HSPs: 3)
Name: scaffold0673
Description:

Target: scaffold0673; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 180 - 247
Target Start/End: Original strand, 6681 - 6748
Alignment:
Q  180 tcaagggttggcagaagagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggt 247  Q
    ||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  6681 tcaagggttgggagaagatctaggagcaaaattgaagcctaagctagagagattaacctaactaaggt 6748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0673; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 180 - 249
Target Start/End: Original strand, 656 - 724
Alignment:
Q  180 tcaagggttggcagaagagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||| |||||| ||||||||||    
T  656 tcaagggttgggagaagagctaggagcaaaattgaagcctaagctagagagagtaacct-actaaggtaa 724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0673; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 6505 - 6614
Alignment:
Q  3 agaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttca 102  Q
    ||||||||||||||||||||  ||  ||| |||||||  ||||||| ||||||| |||||||| |||  | |||||||||||||||||||||||| ||||    
T  6505 agaaatgggttaagtccattatgtg-gagggttaggcacattaaggagacttgacataaaaacctacattcatgagaaatttcctcacactttca-ttca 6602  T
Q  103 taagatattttt 114  Q
    ||||||||||||    
T  6603 taagatattttt 6614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 8160 - 8051
Alignment:
Q  3 agaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttca 102  Q
    |||||||||||||||||||| |||  ||| ||| || | ||||||| |||||||||||||||| ||| ||||||||||||||||||| ||||||| ||||    
T  8160 agaaatgggttaagtccattaagtg-gagggttgggtccattaaggagacttgatataaaaacctacacttatgagaaatttcctcatactttca-ttca 8063  T
Q  103 taagatattttt 114  Q
    ||||||||||||    
T  8062 taagatattttt 8051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 180 - 249
Target Start/End: Complemental strand, 7983 - 7915
Alignment:
Q  180 tcaagggttggcagaagagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  7983 tcaagggttgggagaagagctaggagcaaaattgaagcctaagctagagagattaacct-actaaggtaa 7915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 56; Significance: 3e-23; HSPs: 9)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 182 - 249
Target Start/End: Original strand, 132084 - 132151
Alignment:
Q  182 aagggttggcagaagagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    ||||||||| |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||    
T  132084 aagggttgggagaagagctatgagaaaaattgaagtctaagctagagagattaacctaactaaggtaa 132151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 180 - 249
Target Start/End: Complemental strand, 88689 - 88620
Alignment:
Q  180 tcaagggttggcagaagagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    ||||||||| | |||||||||||||| |||||||||| |||||||||||||||||| ||||  |||||||    
T  88689 tcaagggttcggagaagagctaggagaaaaattgaagcctaagctagagagattaatctaataaaggtaa 88620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 16300 - 16246
Alignment:
Q  195 agagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    |||||||||||| ||||||||| ||||||||| |||||||| |||||||||||||    
T  16300 agagctaggagctaaattgaagcctaagctagggagattaatctaactaaggtaa 16246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 25831 - 25777
Alignment:
Q  195 agagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    |||||||||||| ||||||||| ||||||||| |||||||| |||||||||||||    
T  25831 agagctaggagctaaattgaagcctaagctagggagattaatctaactaaggtaa 25777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 249
Target Start/End: Complemental strand, 12091 - 12034
Alignment:
Q  192 agaagagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    ||||||||||||||  ||||||||| ||||||||| |||||||| |||||||||||||    
T  12091 agaagagctaggagttaaattgaagcctaagctagggagattaatctaactaaggtaa 12034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 114
Target Start/End: Complemental strand, 16488 - 16380
Alignment:
Q  6 aatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttcataa 105  Q
    ||||| |||| |||||| || || || |||||||| ||| ||||||| |  ||||||||| |  |||||   ||||||||||||||||||||||||| ||    
T  16488 aatggattaaatccattaagctttagggttaggcccatttaggggacatactataaaaaccttgtcttagaggaaatttcctcacactttcatttcacaa 16389  T
Q  106 gatattttt 114  Q
    |||||||||    
T  16388 gatattttt 16380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 114
Target Start/End: Complemental strand, 26019 - 25911
Alignment:
Q  6 aatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttcataa 105  Q
    ||||| |||| |||||| || || || |||||||| ||| ||||||| |  ||||||||| |  |||||   ||||||||||||||||||||||||| ||    
T  26019 aatggattaaatccattaagctttagggttaggcccatttaggggacatactataaaaaccttgtcttagaggaaatttcctcacactttcatttcacaa 25920  T
Q  106 gatattttt 114  Q
    |||||||||    
T  25919 gatattttt 25911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 57 - 114
Target Start/End: Original strand, 131961 - 132016
Alignment:
Q  57 tataaaaacatactcttatgagaaatttcctcacactttcatttcataagatattttt 114  Q
    |||| |||| |||||||||||||| |||||||||||||||  ||||||||||||||||    
T  131961 tatataaacctactcttatgagaa-tttcctcacactttc-cttcataagatattttt 132016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 110
Target Start/End: Complemental strand, 12641 - 12537
Alignment:
Q  6 aatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttcataa 105  Q
    |||||||||| |||||| || || || |||||||  ||| ||||||| |  ||||||||| |  |||||   ||||||||||||||||||||| ||| ||    
T  12641 aatgggttaaatccattaagctttagggttaggcgcatttaggggacatagtataaaaaccttgtcttagaggaaatttcctcacactttcatatcacaa 12542  T
Q  106 gatat 110  Q
    |||||    
T  12541 gatat 12537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 54; Significance: 4e-22; HSPs: 4)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 180 - 249
Target Start/End: Complemental strand, 4974 - 4906
Alignment:
Q  180 tcaagggttggcagaagagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  4974 tcaagggttgggagaagagctaggagcaaaattgaagcctaagctagagagattaacct-actaaggtaa 4906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 180 - 249
Target Start/End: Complemental strand, 9588 - 9520
Alignment:
Q  180 tcaagggttggcagaagagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  9588 tcaagggttgggagaagagctaggagcaaaattgaagcctaagctagagagattaacct-actaaggtaa 9520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 57 - 113
Target Start/End: Complemental strand, 5097 - 5041
Alignment:
Q  57 tataaaaacatactcttatgagaaatttcctcacactttcatttcataagatatttt 113  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||    
T  5097 tataaaaacctacacttatgagaaatttcctcacactttcatttcataagatatttt 5041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 57 - 113
Target Start/End: Complemental strand, 9711 - 9655
Alignment:
Q  57 tataaaaacatactcttatgagaaatttcctcacactttcatttcataagatatttt 113  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||    
T  9711 tataaaaacctacacttatgagaaatttcctcacactttcatttcataagatatttt 9655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 180 - 249
Target Start/End: Complemental strand, 7583 - 7515
Alignment:
Q  180 tcaagggttggcagaagagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  7583 tcaagggttgggagaagagctaggagcaaaattgaagcctaagctagagagattaacct-actaaggtaa 7515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 57 - 113
Target Start/End: Complemental strand, 7706 - 7650
Alignment:
Q  57 tataaaaacatactcttatgagaaatttcctcacactttcatttcataagatatttt 113  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||    
T  7706 tataaaaacctacacttatgagaaatttcctcacactttcatttcataagatatttt 7650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 10525 - 10417
Alignment:
Q  5 aaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttcata 104  Q
    ||||||||||| |||||| |||| |||||||||||| ||||| |||||||||||||||||| |  |||||   ||||||| |||||| ||||||||||||    
T  10525 aaatgggttaaatccattaagtt-gagagttaggcccattaaagggacttgatataaaaaccttgtcttagaggaaatttgctcacattttcatttcata 10427  T
Q  105 agatattttt 114  Q
    ||||||||||    
T  10426 agatattttt 10417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 53; Significance: 2e-21; HSPs: 4)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 114
Target Start/End: Complemental strand, 31634 - 31526
Alignment:
Q  6 aatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttcataa 105  Q
    |||||||||| |||||| || || ||||||||||| |||||||||||||  ||||||||| |  |||||   ||||||||||||||||||||||||| ||    
T  31634 aatgggttaaatccattaagctttagagttaggcccattaaggggacttactataaaaaccttgtcttagaggaaatttcctcacactttcatttcacaa 31535  T
Q  106 gatattttt 114  Q
    |||||||||    
T  31534 gatattttt 31526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 71011 - 70957
Alignment:
Q  195 agagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    |||||||||||||||||||||| ||||||||| |||||||| |||||||||||||    
T  71011 agagctaggagcaaaattgaagcctaagctagggagattaatctaactaaggtaa 70957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 31444 - 31390
Alignment:
Q  195 agagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    |||||||||| ||||||||||| ||||||||| |||||||| |||||||||||||    
T  31444 agagctaggatcaaaattgaagcctaagctagggagattaatctaactaaggtaa 31390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 71204 - 71095
Alignment:
Q  3 agaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttca 102  Q
    |||||||||||| ||||||| |||| ||| ||||||||  || | ||||| |  |||||||   || ||||||||||||||||| |||||||||| ||||    
T  71204 agaaatgggttacgtccattaagtt-gagggttaggcccgtttatgggacatactataaaagtctagtcttatgagaaatttccacacactttca-ttca 71107  T
Q  103 taagatattttt 114  Q
    ||||||||||||    
T  71106 taagatattttt 71095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480 (Bit Score: 52; Significance: 7e-21; HSPs: 4)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 4907 - 5015
Alignment:
Q  3 agaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttca 102  Q
    |||||||||||||||||||| |||  ||| |||||||||| ||||| |||||  ||||||||| |||||||||||| |||||||||||||||||  ||||    
T  4907 agaaatgggttaagtccattaagtg-gagggttaggcctaataaggagacttagtataaaaacctactcttatgag-aatttcctcacactttc-cttca 5003  T
Q  103 taagatattttt 114  Q
    ||||||||||||    
T  5004 taagatattttt 5015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 5097 - 5150
Alignment:
Q  195 agagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    |||||||||||||||||||||| ||||||||| |||||||| || ||||||||||    
T  5097 agagctaggagcaaaattgaagcctaagctagggagattaatct-actaaggtaa 5150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 8729 - 8783
Alignment:
Q  195 agagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    ||||||||||| |||| ||||| ||||||||| |||||||| |||||||||||||    
T  8729 agagctaggagaaaaaatgaagcctaagctagggagattaatctaactaaggtaa 8783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 114
Target Start/End: Original strand, 8543 - 8649
Alignment:
Q  8 tgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttcataaga 107  Q
    ||||||||||||| | || || || |||||||| ||| ||||||| |  | ||||||| |  |||||   |||||||||||| |||||||||||| ||||    
T  8543 tgggttaagtccactaagctttagggttaggcccatttaggggacatactctaaaaaccttgtcttagatgaaatttcctcaaactttcatttcacaaga 8642  T
Q  108 tattttt 114  Q
    |||||||    
T  8643 tattttt 8649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 52; Significance: 7e-21; HSPs: 4)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 4 - 114
Target Start/End: Complemental strand, 85922 - 85811
Alignment:
Q  4 gaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttca-tttca 102  Q
    |||||| ||||| |||||| ||||||||||||||||| |||||||||||||  ||||||||| |   ||||   |||||||||||||||||||| |||||    
T  85922 gaaatgagttaaatccattaagtttgagagttaggcccattaaggggacttactataaaaaccttgacttagaggaaatttcctcacactttcattttca 85823  T
Q  103 taagatattttt 114  Q
    ||||||||||||    
T  85822 taagatattttt 85811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 159698 - 159644
Alignment:
Q  195 agagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    |||||| ||||||||||||||| ||||||||| |||||||| |||||||||||||    
T  159698 agagcttggagcaaaattgaagcctaagctagggagattaatctaactaaggtaa 159644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 201 - 249
Target Start/End: Complemental strand, 85724 - 85676
Alignment:
Q  201 aggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    |||||||||||||||||||||||||| |||||||| || ||||||||||    
T  85724 aggagcaaaattgaagtctaagctagggagattaatcttactaaggtaa 85676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 110
Target Start/End: Complemental strand, 159889 - 159785
Alignment:
Q  6 aatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttcataa 105  Q
    |||||||||| |||||| || || || |||||||| ||||||||||| |  ||||||||| |  |||||   |||||||| |||||||||||||||| ||    
T  159889 aatgggttaaatccattaagctttagggttaggcccattaaggggacatactataaaaaccttgtcttagaggaaatttcgtcacactttcatttcacaa 159790  T
Q  106 gatat 110  Q
    |||||    
T  159789 gatat 159785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 51; Significance: 3e-20; HSPs: 4)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 113
Target Start/End: Original strand, 109120 - 109228
Alignment:
Q  3 agaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttca 102  Q
    |||||||||||||||||||| |||| ||||||||| || ||| | | |||||  ||||||||| || ||||||||||||||||| |||||||||| ||||    
T  109120 agaaatgggttaagtccattaagtt-gagagttagacccatttatgagacttactataaaaacctagtcttatgagaaatttccacacactttca-ttca 109217  T
Q  103 taagatatttt 113  Q
    |||||||||||    
T  109218 taagatatttt 109228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 113
Target Start/End: Original strand, 117621 - 117729
Alignment:
Q  3 agaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttca 102  Q
    |||||||||||||||||||| |||| ||||||||| || ||| | | |||||  ||||||||| || ||||||||||||||||| |||||||||| ||||    
T  117621 agaaatgggttaagtccattaagtt-gagagttagacccatttatgagacttactataaaaacctagtcttatgagaaatttccacacactttca-ttca 117718  T
Q  103 taagatatttt 113  Q
    |||||||||||    
T  117719 taagatatttt 117729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 109309 - 109363
Alignment:
Q  195 agagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    ||||||||||| |||||||| | ||||| ||| |||||||| |||||||||||||    
T  109309 agagctaggagaaaaattgatgcctaaggtagggagattaatctaactaaggtaa 109363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 117810 - 117864
Alignment:
Q  195 agagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    ||||||||||| |||||||| | ||||| ||| |||||||| |||||||||||||    
T  117810 agagctaggagaaaaattgatgcctaaggtagggagattaatctaactaaggtaa 117864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 180 - 249
Target Start/End: Complemental strand, 15285 - 15217
Alignment:
Q  180 tcaagggttggcagaagagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    |||||||||||  |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  15285 tcaagggttgggggaagagctaggagcaaaattgaagcctaagctagagagattaacct-actaaggtaa 15217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 15450 - 15343
Alignment:
Q  3 agaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttca 102  Q
    ||||||| |||||||||||| |||  ||| |||||||| | ||||| |||||  ||||||||| |||| ||||||||| |||||||||||||||  ||||    
T  15450 agaaatgagttaagtccattaagtg-gagggttaggcccaataaggagacttagtataaaaacctact-ttatgagaa-tttcctcacactttc-cttca 15355  T
Q  103 taagatattttt 114  Q
    ||||||||||||    
T  15354 taagatattttt 15343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 47; Significance: 7e-18; HSPs: 6)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 199 - 249
Target Start/End: Complemental strand, 31604 - 31554
Alignment:
Q  199 ctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  31604 ctaggagcaaaattgaagcctaagctagagagattaacctaactaaggtaa 31554  T

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Target: scaffold0120; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 199 - 249
Target Start/End: Original strand, 47402 - 47452
Alignment:
Q  199 ctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  47402 ctaggagcaaaattgaagcctaagctagagagattaacctaactaaggtaa 47452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 57 - 114
Target Start/End: Complemental strand, 22048 - 21991
Alignment:
Q  57 tataaaaacatactcttatgagaaatttcctcacactttcatttcataagatattttt 114  Q
    |||| |||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  22048 tatataaacctactcctatgagaaatttcctcacactttcatttcataagatattttt 21991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 57 - 114
Target Start/End: Complemental strand, 31747 - 31690
Alignment:
Q  57 tataaaaacatactcttatgagaaatttcctcacactttcatttcataagatattttt 114  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  31747 tatataaacctactcttatgagaaatttcctcacactttcatttcataaaatattttt 31690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 57 - 114
Target Start/End: Original strand, 47259 - 47316
Alignment:
Q  57 tataaaaacatactcttatgagaaatttcctcacactttcatttcataagatattttt 114  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  47259 tatataaacctactcttatgagaaatttcctcacactttcatttcataaaatattttt 47316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 199 - 249
Target Start/End: Complemental strand, 21905 - 21855
Alignment:
Q  199 ctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  21905 ctaggagcaaaattgaagcctaaggtagagagattaacctaactaaggtaa 21855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 180 - 249
Target Start/End: Complemental strand, 8760 - 8692
Alignment:
Q  180 tcaagggttggcagaagagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    ||||||||| | ||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||    
T  8760 tcaagggttaggagaagagctaggagcaaaattgaagcctaagctagggagattaacct-actaaggtaa 8692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 8935 - 8828
Alignment:
Q  3 agaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttca 102  Q
    |||||||||||||||||||| || | ||| |||||||| | ||||| |||||  ||| ||||| |||||||||||| ||||||| |||||||||  ||||    
T  8935 agaaatgggttaagtccattaag-tggagggttaggcccaataaggagacttagtat-aaaacctactcttatgag-aatttccacacactttc-cttca 8840  T
Q  103 taagatattttt 114  Q
    ||||||||||||    
T  8839 taagatattttt 8828  T

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Target: scaffold0022 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 112394 - 112448
Alignment:
Q  195 agagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    |||||||||||||||||||||| ||||||||| |||||||| |||||||||||||    
T  112394 agagctaggagcaaaattgaagcctaagctagggagattaatctaactaaggtaa 112448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 114
Target Start/End: Original strand, 112203 - 112313
Alignment:
Q  4 gaaatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttcat 103  Q
    |||||| ||||  |||||| | ||||||| ||||||| |||||||| || |  || |||||| |  |||||   ||||||||||||||||||||||||||    
T  112203 gaaatgagttatatccattaaatttgagaattaggcccattaagggaacctactacaaaaaccttgtcttagaggaaatttcctcacactttcatttcat 112302  T
Q  104 aagatattttt 114  Q
    |||||||||||    
T  112303 aagatattttt 112313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 114
Target Start/End: Original strand, 234 - 342
Alignment:
Q  6 aatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttcataa 105  Q
    |||||||||| || ||| || || ||||||||| | |||||||||||||  ||||||||  |  |||||   |||||||| |||||||||||||||||||    
T  234 aatgggttaaatctattaagctttagagttaggtccattaaggggacttactataaaaagcttatcttagaggaaatttcttcacactttcatttcataa 333  T
Q  106 gatattttt 114  Q
    |||||||||    
T  334 gatattttt 342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 424 - 478
Alignment:
Q  195 agagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    |||||||||| ||||||||||| |||| |||| |||||||| |||||||||||||    
T  424 agagctaggatcaaaattgaagcctaatctagggagattaatctaactaaggtaa 478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0554 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0554
Description:

Target: scaffold0554; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 114
Target Start/End: Complemental strand, 2503 - 2395
Alignment:
Q  6 aatgggttaagtccattgagtttgagagttaggcctattaaggggacttgatataaaaacatactcttatgagaaatttcctcacactttcatttcataa 105  Q
    ||||||||||||||||  || || ||  ||||||| ||| ||||||| |  ||||||||| |  |||||   ||||||||||||||||||||||||||||    
T  2503 aatgggttaagtccatgaagctttaggattaggcccatttaggggacatcctataaaaaccttgtcttagaggaaatttcctcacactttcatttcataa 2404  T
Q  106 gatattttt 114  Q
    |||||||||    
T  2403 gatattttt 2395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 89713 - 89767
Alignment:
Q  195 agagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    |||||||||||| ||||||||| ||||||||| |||||||| |||||||||||||    
T  89713 agagctaggagctaaattgaagcctaagctagggagattaatctaactaaggtaa 89767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1867 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold1867
Description:

Target: scaffold1867; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 57 - 113
Target Start/End: Complemental strand, 680 - 623
Alignment:
Q  57 tataaaaacatactcttatgagaaatttcctcacactttcatttca-taagatatttt 113  Q
    |||| ||||||||||||||||| |||||||||||||||||||| || |||||||||||    
T  680 tatataaacatactcttatgagtaatttcctcacactttcattacactaagatatttt 623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1867; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 542 - 489
Alignment:
Q  195 agagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    ||||||||||| |||||||||| ||||||||| ||||||||||| ||||||||||    
T  542 agagctaggagaaaaattgaagcctaagctagggagattaacct-actaaggtaa 489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0816 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0816
Description:

Target: scaffold0816; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 57 - 113
Target Start/End: Original strand, 2776 - 2833
Alignment:
Q  57 tataaaaacatactcttatgagaaatttcctcacactttcatttca-taagatatttt 113  Q
    |||| ||||||||| |||||||||||||||||||||||||||| || |||||||||||    
T  2776 tatataaacatacttttatgagaaatttcctcacactttcattacactaagatatttt 2833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0816; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 249
Target Start/End: Original strand, 2917 - 2968
Alignment:
Q  197 agctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    |||||||||||||||||||| ||||||||| |||| |||||| ||||||||||    
T  2917 agctaggagcaaaattgaagcctaagctagggagactaacct-actaaggtaa 2968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 57 - 113
Target Start/End: Complemental strand, 164750 - 164693
Alignment:
Q  57 tataaaaacatactcttatgagaaatttcctcacactttcatttca-taagatatttt 113  Q
    |||| ||||||||||| |||||||||||||||||||||||||| || |||||||||||    
T  164750 tatataaacatactctcatgagaaatttcctcacactttcattacactaagatatttt 164693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 197 - 249
Target Start/End: Complemental strand, 164609 - 164558
Alignment:
Q  197 agctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    |||||||||||||||||||| ||||||||| ||||||||||| ||||||||||    
T  164609 agctaggagcaaaattgaagcctaagctagggagattaacct-actaaggtaa 164558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 199 - 249
Target Start/End: Complemental strand, 12664 - 12614
Alignment:
Q  199 ctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    ||||||| |||||||||| ||||||||| |||||||| |||||||||||||    
T  12664 ctaggagaaaaattgaagcctaagctagggagattaatctaactaaggtaa 12614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 114
Target Start/End: Complemental strand, 12784 - 12748
Alignment:
Q  78 gaaatttcctcacactttcatttcataagatattttt 114  Q
    ||||||||||||||||||||||||| |||||||||||    
T  12784 gaaatttcctcacactttcatttcacaagatattttt 12748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 8204 - 8150
Alignment:
Q  195 agagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    |||||||||||| |||||||||  |||||||| | |||||| |||||||||||||    
T  8204 agagctaggagctaaattgaagcttaagctagggggattaatctaactaaggtaa 8150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 70154 - 70208
Alignment:
Q  195 agagctaggagcaaaattgaagtctaagctagagagattaacctaactaaggtaa 249  Q
    |||||||||||||||| |||||  |||||||| | |||||| |||||||||||||    
T  70154 agagctaggagcaaaaatgaagcttaagctagggggattaatctaactaaggtaa 70208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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