View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20183_low_12 (Length: 458)

Name: NF20183_low_12
Description: NF20183
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20183_low_12
NF20183_low_12
[»] chr3 (40 HSPs)
chr3 (22-443)||(8225572-8225993)
chr3 (80-441)||(18477576-18477946)
chr3 (80-380)||(11656854-11657151)
chr3 (80-366)||(15674142-15674432)
chr3 (80-367)||(214399-214686)
chr3 (80-367)||(31650250-31650539)
chr3 (84-367)||(25019959-25020247)
chr3 (80-166)||(17042064-17042153)
chr3 (388-442)||(8225479-8225533)
chr3 (388-442)||(20747533-20747587)
chr3 (88-169)||(13920266-13920350)
chr3 (389-442)||(15674583-15674636)
chr3 (88-168)||(7495260-7495343)
chr3 (88-169)||(7478497-7478581)
chr3 (400-442)||(11656669-11656711)
chr3 (88-169)||(13914541-13914625)
chr3 (361-443)||(214800-214892)
chr3 (122-172)||(979730-979780)
chr3 (122-172)||(3551828-3551878)
chr3 (325-367)||(7495501-7495543)
chr3 (326-367)||(7478735-7478776)
chr3 (122-166)||(18063556-18063600)
chr3 (122-165)||(13514967-13515010)
chr3 (122-164)||(286249-286291)
chr3 (122-164)||(6578898-6578940)
chr3 (122-164)||(7028420-7028462)
chr3 (325-367)||(13914342-13914384)
chr3 (396-434)||(20747634-20747672)
chr3 (95-172)||(21253314-21253396)
chr3 (94-177)||(3444372-3444457)
chr3 (122-157)||(28051913-28051948)
chr3 (325-367)||(13918383-13918425)
chr3 (122-164)||(18482722-18482764)
chr3 (85-145)||(6578584-6578649)
chr3 (80-121)||(6578807-6578848)
chr3 (86-161)||(8749787-8749866)
chr3 (400-441)||(11656811-11656851)
chr3 (316-353)||(17042298-17042335)
chr3 (122-166)||(17135494-17135538)
chr3 (122-166)||(24196291-24196335)
[»] chr4 (45 HSPs)
chr4 (85-438)||(10722772-10723134)
chr4 (85-438)||(10936541-10936903)
chr4 (80-441)||(21478893-21479254)
chr4 (94-351)||(10197566-10197825)
chr4 (122-353)||(16616525-16616756)
chr4 (84-204)||(10682975-10683095)
chr4 (84-204)||(10896615-10896735)
chr4 (122-355)||(16654684-16654918)
chr4 (85-204)||(10718203-10718321)
chr4 (85-204)||(10931972-10932090)
chr4 (122-295)||(49974885-49975058)
chr4 (394-442)||(21478752-21478800)
chr4 (80-152)||(16654599-16654674)
chr4 (394-442)||(10722628-10722676)
chr4 (394-442)||(10936397-10936445)
chr4 (80-159)||(33746693-33746775)
chr4 (79-161)||(33744242-33744327)
chr4 (92-169)||(31971677-31971757)
chr4 (86-152)||(18006065-18006134)
chr4 (325-367)||(31971478-31971520)
chr4 (405-442)||(50908382-50908419)
chr4 (122-166)||(9069710-9069754)
chr4 (122-166)||(18601009-18601053)
chr4 (407-442)||(16616316-16616351)
chr4 (86-161)||(11324600-11324679)
chr4 (122-166)||(15623202-15623246)
chr4 (88-170)||(15687033-15687119)
chr4 (122-166)||(15699685-15699729)
chr4 (122-165)||(10724964-10725007)
chr4 (122-165)||(10938733-10938776)
chr4 (388-438)||(16616225-16616276)
chr4 (122-165)||(19183031-19183074)
chr4 (122-161)||(41786204-41786243)
chr4 (94-166)||(2680501-2680576)
chr4 (85-145)||(10683257-10683322)
chr4 (85-145)||(10723308-10723373)
chr4 (85-145)||(10896897-10896962)
chr4 (85-145)||(10937077-10937142)
chr4 (86-161)||(19894145-19894224)
chr4 (22-70)||(5074123-5074171)
chr4 (327-367)||(15699891-15699931)
chr4 (122-166)||(16384656-16384700)
chr4 (86-152)||(22555731-22555801)
chr4 (122-166)||(32862410-32862454)
chr4 (85-125)||(41786279-41786319)
[»] chr2 (23 HSPs)
chr2 (80-441)||(36397797-36398167)
chr2 (129-441)||(26859346-26859667)
chr2 (80-367)||(24311157-24311448)
chr2 (80-356)||(31588056-31588335)
chr2 (80-367)||(24312949-24313234)
chr2 (86-177)||(27111787-27111881)
chr2 (86-177)||(19197643-19197737)
chr2 (394-442)||(26859758-26859806)
chr2 (86-177)||(27108198-27108292)
chr2 (389-439)||(24311770-24311820)
chr2 (388-442)||(24311796-24311852)
chr2 (389-441)||(24313385-24313437)
chr2 (394-442)||(36398259-36398307)
chr2 (86-152)||(20645604-20645673)
chr2 (122-172)||(21249547-21249597)
chr2 (295-367)||(24311546-24311619)
chr2 (122-166)||(15329086-15329130)
chr2 (122-166)||(24789508-24789552)
chr2 (86-177)||(25347897-25347991)
chr2 (122-169)||(20475938-20475985)
chr2 (388-441)||(24311918-24311972)
chr2 (85-121)||(15329180-15329216)
chr2 (86-152)||(18605928-18605998)
[»] chr6 (43 HSPs)
chr6 (81-441)||(20559078-20559447)
chr6 (92-388)||(28624356-28624654)
chr6 (185-441)||(34648444-34648709)
chr6 (80-234)||(28622913-28623070)
chr6 (80-189)||(34639513-34639622)
chr6 (122-367)||(20764352-20764597)
chr6 (85-356)||(21316902-21317178)
chr6 (275-367)||(28623082-28623174)
chr6 (86-177)||(18152069-18152163)
chr6 (122-166)||(19077909-19077953)
chr6 (394-442)||(20558938-20558986)
chr6 (394-442)||(28624180-28624228)
chr6 (394-442)||(34656618-34656666)
chr6 (88-165)||(16308682-16308763)
chr6 (80-166)||(24542420-24542509)
chr6 (122-166)||(12385207-12385251)
chr6 (122-166)||(13196090-13196134)
chr6 (122-166)||(19894017-19894061)
chr6 (125-172)||(15930200-15930247)
chr6 (122-172)||(19598441-19598491)
chr6 (122-172)||(23882047-23882097)
chr6 (122-164)||(25806176-25806218)
chr6 (325-365)||(16308924-16308964)
chr6 (122-166)||(17235360-17235404)
chr6 (122-166)||(23879651-23879695)
chr6 (122-166)||(25970443-25970487)
chr6 (122-166)||(25974883-25974927)
chr6 (122-164)||(11961237-11961279)
chr6 (122-164)||(12039059-12039101)
chr6 (123-208)||(30425606-30425691)
chr6 (122-166)||(8465016-8465060)
chr6 (122-166)||(21722757-21722801)
chr6 (122-166)||(33666557-33666601)
chr6 (123-166)||(17868275-17868318)
chr6 (123-166)||(17878058-17878101)
chr6 (85-145)||(26964817-26964881)
chr6 (131-166)||(29253039-29253074)
chr6 (325-367)||(21727705-21727747)
chr6 (122-172)||(26964902-26964952)
chr6 (318-367)||(19658479-19658528)
chr6 (122-166)||(9281059-9281103)
chr6 (122-166)||(19658685-19658729)
chr6 (122-166)||(21705879-21705923)
[»] scaffold0338 (2 HSPs)
scaffold0338 (179-442)||(9937-10200)
scaffold0338 (388-442)||(10239-10293)
[»] scaffold0008 (2 HSPs)
scaffold0008 (80-441)||(41092-41469)
scaffold0008 (80-249)||(36237-36412)
[»] chr5 (27 HSPs)
chr5 (80-433)||(22183622-22183987)
chr5 (80-356)||(24118117-24118396)
chr5 (216-356)||(9523388-9523529)
chr5 (86-177)||(17660774-17660868)
chr5 (361-442)||(9523173-9523263)
chr5 (88-168)||(20127703-20127786)
chr5 (92-169)||(20740299-20740379)
chr5 (394-441)||(22184057-22184104)
chr5 (122-166)||(23624607-23624651)
chr5 (122-166)||(30605040-30605084)
chr5 (122-165)||(22082040-22082083)
chr5 (325-367)||(20740543-20740585)
chr5 (122-166)||(22251390-22251434)
chr5 (122-170)||(38406123-38406171)
chr5 (325-367)||(22130414-22130456)
chr5 (122-164)||(23757606-23757648)
chr5 (122-164)||(23823062-23823104)
chr5 (86-161)||(17920120-17920199)
chr5 (86-161)||(34404765-34404844)
chr5 (122-166)||(18221876-18221920)
chr5 (216-296)||(25668354-25668434)
chr5 (122-166)||(26037543-26037587)
chr5 (122-165)||(24190630-24190673)
chr5 (125-162)||(9421868-9421905)
chr5 (326-367)||(18221673-18221714)
chr5 (122-166)||(20714092-20714136)
chr5 (122-174)||(25674464-25674516)
[»] chr7 (47 HSPs)
chr7 (93-367)||(26193657-26193934)
chr7 (85-367)||(24814657-24814943)
chr7 (88-366)||(19295316-19295598)
chr7 (131-367)||(15708924-15709162)
chr7 (204-352)||(23174172-23174321)
chr7 (86-190)||(19353857-19353964)
chr7 (122-339)||(23297079-23297296)
chr7 (85-353)||(23579275-23579546)
chr7 (361-442)||(26194048-26194138)
chr7 (88-169)||(4793910-4793994)
chr7 (88-169)||(9567653-9567737)
chr7 (94-231)||(10252074-10252214)
chr7 (89-163)||(14688081-14688158)
chr7 (361-442)||(15708720-15708810)
chr7 (389-442)||(23174474-23174527)
chr7 (394-442)||(17946018-17946066)
chr7 (393-442)||(24814475-24814524)
chr7 (291-367)||(7509003-7509078)
chr7 (122-165)||(12326579-12326622)
chr7 (325-367)||(4794150-4794192)
chr7 (122-172)||(21261190-21261240)
chr7 (98-169)||(4541986-4542060)
chr7 (325-365)||(9564862-9564902)
chr7 (325-365)||(9567456-9567496)
chr7 (122-166)||(10661628-10661672)
chr7 (122-166)||(14927411-14927455)
chr7 (122-166)||(15350877-15350921)
chr7 (80-135)||(15711758-15711816)
chr7 (122-166)||(20992309-20992353)
chr7 (122-166)||(23082125-23082169)
chr7 (122-166)||(23960791-23960835)
chr7 (122-166)||(26132304-26132348)
chr7 (86-164)||(23174062-23174143)
chr7 (127-169)||(9893425-9893467)
chr7 (122-172)||(20924456-20924506)
chr7 (122-166)||(10280610-10280654)
chr7 (122-166)||(16207230-16207274)
chr7 (270-356)||(10251958-10252043)
chr7 (122-164)||(42636974-42637016)
chr7 (85-145)||(10661932-10661997)
chr7 (86-161)||(12560546-12560625)
chr7 (86-161)||(30226816-30226895)
chr7 (122-166)||(645898-645942)
chr7 (122-166)||(4459505-4459549)
chr7 (327-367)||(14927212-14927252)
chr7 (327-367)||(15350678-15350718)
chr7 (122-166)||(24902872-24902915)
[»] chr1 (34 HSPs)
chr1 (170-367)||(47940369-47940565)
chr1 (122-356)||(51471440-51471673)
chr1 (80-189)||(22347930-22348039)
chr1 (80-188)||(8282664-8282775)
chr1 (88-166)||(12753826-12753907)
chr1 (389-442)||(22963864-22963917)
chr1 (195-367)||(17355246-17355418)
chr1 (394-441)||(47940784-47940831)
chr1 (122-172)||(10339508-10339558)
chr1 (394-442)||(47940923-47940971)
chr1 (133-260)||(15914804-15914931)
chr1 (88-177)||(18379405-18379497)
chr1 (122-166)||(20200438-20200482)
chr1 (122-166)||(26971747-26971791)
chr1 (316-367)||(17379159-17379210)
chr1 (123-166)||(22891151-22891194)
chr1 (86-161)||(11084991-11085070)
chr1 (80-152)||(51471355-51471430)
chr1 (85-146)||(17355113-17355170)
chr1 (122-166)||(20840613-20840657)
chr1 (122-166)||(23477285-23477329)
chr1 (122-164)||(11667252-11667294)
chr1 (122-164)||(24986751-24986793)
chr1 (316-353)||(12753638-12753675)
chr1 (87-143)||(15803479-15803540)
chr1 (85-145)||(23477199-23477264)
chr1 (86-161)||(33063133-33063212)
chr1 (86-161)||(45598662-45598741)
chr1 (122-166)||(1626339-1626383)
chr1 (122-166)||(9452172-9452216)
chr1 (122-166)||(13150058-13150102)
chr1 (85-121)||(17838242-17838278)
chr1 (80-120)||(18389419-18389459)
chr1 (122-166)||(25349578-25349622)
[»] chr8 (22 HSPs)
chr8 (104-356)||(23863622-23863877)
chr8 (80-350)||(24849469-24849735)
chr8 (133-356)||(12813971-12814193)
chr8 (361-442)||(23864002-23864092)
chr8 (361-441)||(24849854-24849943)
chr8 (122-172)||(18622421-18622471)
chr8 (88-231)||(1684656-1684802)
chr8 (88-182)||(12376205-12376302)
chr8 (122-164)||(26537055-26537097)
chr8 (325-366)||(1684520-1684561)
chr8 (85-145)||(9997555-9997620)
chr8 (86-161)||(17880070-17880149)
chr8 (122-166)||(20254226-20254270)
chr8 (316-367)||(20254420-20254471)
chr8 (88-166)||(23250483-23250564)
chr8 (80-123)||(23867580-23867623)
chr8 (124-166)||(22485899-22485941)
chr8 (22-68)||(27860484-27860530)
chr8 (122-166)||(9997263-9997306)
chr8 (126-166)||(23540760-23540800)
chr8 (122-166)||(27924802-27924846)
chr8 (122-166)||(33962499-33962543)
[»] scaffold0064 (4 HSPs)
scaffold0064 (88-191)||(52254-52360)
scaffold0064 (92-187)||(45284-45382)
scaffold0064 (325-366)||(45513-45554)
scaffold0064 (325-367)||(52486-52528)
[»] scaffold0520 (2 HSPs)
scaffold0520 (86-282)||(5616-5816)
scaffold0520 (103-177)||(11977-12054)
[»] scaffold0034 (2 HSPs)
scaffold0034 (88-169)||(50222-50306)
scaffold0034 (325-367)||(73799-73841)
[»] scaffold0505 (1 HSPs)
scaffold0505 (270-353)||(9540-9623)
[»] scaffold1001 (2 HSPs)
scaffold1001 (122-166)||(728-772)
scaffold1001 (80-121)||(822-863)
[»] scaffold0480 (1 HSPs)
scaffold0480 (98-169)||(11943-12017)
[»] scaffold0129 (1 HSPs)
scaffold0129 (122-166)||(16271-16315)
[»] scaffold0190 (1 HSPs)
scaffold0190 (122-166)||(15970-16014)
[»] scaffold0185 (1 HSPs)
scaffold0185 (122-166)||(1717-1761)
[»] scaffold0103 (1 HSPs)
scaffold0103 (122-166)||(25027-25071)
[»] scaffold0069 (1 HSPs)
scaffold0069 (123-166)||(9440-9483)
[»] scaffold0088 (1 HSPs)
scaffold0088 (122-166)||(37356-37400)
[»] scaffold0059 (1 HSPs)
scaffold0059 (122-166)||(47740-47784)
[»] scaffold0035 (1 HSPs)
scaffold0035 (122-172)||(38065-38115)
[»] scaffold0226 (1 HSPs)
scaffold0226 (125-164)||(6891-6931)
[»] scaffold0006 (1 HSPs)
scaffold0006 (122-166)||(88512-88556)


Alignment Details
Target: chr3 (Bit Score: 390; Significance: 0; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 390; E-Value: 0
Query Start/End: Original strand, 22 - 443
Target Start/End: Complemental strand, 8225993 - 8225572
Alignment:
Q  22 ttacagtgagtgcaaaattcaggcaatcccttgtattcgatttccaccgtgtagggagtttgggtattggcttcatttttgctaaaacaaatattcatgt 121  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||  ||||||||||||||||||||||||||||||||||| ||||||    
T  8225993 ttacagtgagtgcaaaattcaggcagtcccttgtattcaatttccaccgtgttgggtatttgggtattggcttcatttttgctaaaacaaatactcatgt 8225894  T
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgccctgtttatgtggcttggtttacgcaatatttatcttattaaagaaacctcgccct 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8225893 atgttggatacgatgttccaacatcttggcacggttcagtgtgccctatttatgtggcttggtttacgcaatatttatcttattaaagaaacctcgccct 8225794  T
Q  222 atttcttgttcaccaagcaacgcgtttttctccagaatcagctggaaaatttgtttctaaaatataaacaatattttaggattccttggtggtgtgtttg 321  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8225793 atttcttgttcaccaagcaacacgtttttctccagaatcagctggaaaatttgtttctaaaatataaacaatattttaggattccttggtggtgtgtttg 8225694  T
Q  322 gcggttcctaaagatgttcctactttttaggagttaccatatttgtgaaatatattttcaaaagagaatatatttctaaagaatatttgtttcaatatat 421  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8225693 gcggttcctaaagatgttcctactttttaggagttaccatatttgtgaaatatattttcaaaagagaatatatttctaaagaatatttgtttcaatatat 8225594  T
Q  422 ttctgaaaagaatatttgatat 443  Q
    ||||||||||||||||||||||    
T  8225593 ttctgaaaagaatatttgatat 8225572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 80 - 441
Target Start/End: Complemental strand, 18477946 - 18477576
Alignment:
Q  80 tttgggtattggcttcatttttgctaaaacaaatattcatgtatgttggatacgatgttccaacatcttggcacggttcagtgtgccctgtttatgtggc 179  Q
    ||||| ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18477946 tttggatattggcttcattgttgctaaaacaaatactcatgtatgttggatacgatgttccaacatcttggcacggttcagtgtgccctgtttatgtggc 18477847  T
Q  180 ttggtttacgcaatatttatcttattaaagaaacctcgccctatttcttgttcaccaagcaacgcgtttttctccagaatcagctggaaaatttgtttct 279  Q
    |||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||||| |  |||||||| |||||||||| |||||| ||||||||||    
T  18477846 ttggtttacgcaatctttatcttattaaggaaaccacgccctatttcttgttcaccaagtagtgcgtttttgtccagaatcaactggaagatttgtttct 18477747  T
Q  280 aaaatataaacaatattttaggattccttggtggtgtgtttggcggttcctaaagatgttcctactttttaggagttaccatatttgtgaaatatatttt 379  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  18477746 aaaatataaacaatatttttggattccttggtggtgtgtttggtggttcctaaagatgttcctactttttaggagttaccatatttgtgaaataaatttt 18477647  T
Q  380 caaaagag---------aatatatttctaaagaatatttgtttcaatatatttctgaaaagaatatttgat 441  Q
    | ||||||         ||||||||||| |||||||||| ||||||||||||||| |||||||||||||||    
T  18477646 ccaaagagattttggaaaatatatttctgaagaatatttatttcaatatatttctaaaaagaatatttgat 18477576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 80 - 380
Target Start/End: Complemental strand, 11657151 - 11656854
Alignment:
Q  80 tttgggtattggcttcatttttgctaaaacaaatattcatgtatgttggatacgatgttccaacatcttggcacggttcagtgtgccctgtttatgtggc 179  Q
    |||||||||| |||||||| ||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||||| ||| | || |||||||||    
T  11657151 tttgggtattagcttcattgttgctaaaataaatactcatgtatgttggatacgatgttccaacatcttgacacggttcagcgtgtcatggttatgtggc 11657052  T
Q  180 ttggtttacgcaatatttatcttattaaagaaacctcgccctatttcttgttcaccaagcaacgcgtttttctccagaatcagctggaaaatttgtttct 279  Q
    |||||||||||||| ||||||||||||| |||| | ||||||||||||||||||||||||| ||||||||| |||| |||||||||||| ||||||||||    
T  11657051 ttggtttacgcaatctttatcttattaaggaaatcacgccctatttcttgttcaccaagcagcgcgtttttgtccaaaatcagctggaagatttgtttct 11656952  T
Q  280 aaaatataaacaatattttaggattccttggtggtgtgtttggcggttcctaaagatgttcctactttttaggagttaccatatttgtgaaatatatttt 379  Q
    |||||||   ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| ||||||||| |||||||||||    
T  11656951 aaaatat---caatattttaggattccttggtgatgtgtttggcggttcctaaagatgttcctacattttaggagttatcatatttgtaaaatatatttt 11656855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 80 - 366
Target Start/End: Original strand, 15674142 - 15674432
Alignment:
Q  80 tttgggtattggcttcatttttgctaaaacaaatattcatgta---tgttggatacgatgttccaacatcttggcacggttcagtgtgccctgtttatgt 176  Q
    |||| |||||| ||||||| ||||||||||||||| |||||||   ||||||||||||||| ||||||||||||||| |||||||||||||| ||| |||    
T  15674142 tttgagtattgacttcattgttgctaaaacaaatactcatgtaagatgttggatacgatgtcccaacatcttggcacagttcagtgtgccctatttgtgt 15674241  T
Q  177 ggcttggtttacgcaatatttatcttattaaagaaacctcgccctatttcttgttcaccaagcaacgcgtttttctccagaatcagctggaaaatttgtt 276  Q
    |||||||||| ||| |  |||||||| | || |||||| |  | |||||||||||||||||| |||   ||||| ||||||||||||||||  |||||||    
T  15674242 ggcttggttttcgcgaactttatcttttcaaggaaaccacagcttatttcttgttcaccaagtaacatatttttgtccagaatcagctggatgatttgtt 15674341  T
Q  277 tctaaaatataaacaatattttaggattccttggtggtg-tgtttggcggttcctaaagatgttcctactttttaggagttaccatatttg 366  Q
     ||||| |||| |||||||||||||||||||||||| || |||||||  |||||||||||||||||||||||||||||||| | |||||||    
T  15674342 cctaaagtatagacaatattttaggattccttggtgatgttgtttggttgttcctaaagatgttcctactttttaggagttgctatatttg 15674432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 80 - 367
Target Start/End: Original strand, 214399 - 214686
Alignment:
Q  80 tttgggtattggcttcatttttgctaaaacaaatattcatgtatg---ttggatacgatgttccaacatcttggcacggttcagtgtgccctgtttatgt 176  Q
    |||| |||||| ||||||| ||||||||||||||| |||||||||   |||||||||||||||||||||||||||||||||||||||| | |||||  ||    
T  214399 tttgagtattgacttcattgttgctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtgtcttgttt--gt 214496  T
Q  177 ggcttggtttacgcaatatttatcttattaaagaaacctcgccctatttcttgttcaccaagcaacgcgtttttctccagaatcagctggaaaatttgtt 276  Q
    |||||||||| ||| |  |||||||| |||| |||||| || | |||||||||||||||||| |||   ||||| |||| ||||||||||   |||| ||    
T  214497 ggcttggttttcgcgaactttatctttttaaggaaaccccgacttatttcttgttcaccaagtaacatatttttgtccaaaatcagctgggtgatttatt 214596  T
Q  277 tctaaaatataaacaatattttaggattccttggtggtgtgtttggcggttcctaaagatgttcctactttttaggagttaccatatttgt 367  Q
    |||||||||||  ||||||||||||| || |||| |||||||||| |||||||||||||||||||||||||||||||||| | ||||||||    
T  214597 tctaaaatatag-caatattttaggactcattggcggtgtgtttgacggttcctaaagatgttcctactttttaggagttgctatatttgt 214686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 80 - 367
Target Start/End: Complemental strand, 31650539 - 31650250
Alignment:
Q  80 tttgggtattggcttcatttttgctaaaacaaatattcatgtatg---ttggatacgatgttccaacatcttggcacggttcagtgtgccctgtttatgt 176  Q
    |||| |||||||||||||| |||| |||||||||| || ||||||   |||||||||| |||||||||||||||||| |||||||||||||||||| |||    
T  31650539 tttgagtattggcttcattgttgcaaaaacaaatactcttgtatgatgttggatacgacgttccaacatcttggcaccgttcagtgtgccctgtttgtgt 31650440  T
Q  177 ggcttggtttacgcaatatttatcttattaaagaaacctcgccctatttcttgttcaccaagcaacgcgtttttctccagaatcagctggaaaatttgtt 276  Q
    |||||||||| ||| |  |||||||| |||| |||||  ||||  ||||||||||||||||| |||  |||||| || ||||||||||||   |||||||    
T  31650439 ggcttggttttcgcgagttttatctttttaaggaaactacgccaaatttcttgttcaccaagtaacatgtttttgtcaagaatcagctgggtgatttgtt 31650340  T
Q  277 tctaaaatataaacaatattttaggattccttggtggtgtgtttggcggttcctaaagatgttcctactttttaggagttaccatatttgt 367  Q
     ||||| |||| |||||||||||||||| |||| | |||| |||||  |||||||||||||||| |||||||||| |||| | ||||||||    
T  31650339 cctaaagtatagacaatattttaggatttcttgat-gtgtttttggtagttcctaaagatgttcttactttttagaagttgctatatttgt 31650250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 84 - 367
Target Start/End: Complemental strand, 25020247 - 25019959
Alignment:
Q  84 ggtattggcttcatttttgctaaaacaaatattcatgtatg---ttggatacgatgttccaacatcttggcacggttcagtgtgccctgtttatgtggct 180  Q
    ||||||||| ||||| ||| ||||||||||| |||||||||   ||||||||||||||||||||||||| ||||||| |||||||| ||||| |||||||    
T  25020247 ggtattggcctcattgttgttaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttgccacggtttagtgtgccttgtttgtgtggct 25020148  T
Q  181 tggtttacgcaatatttatcttattaaag-aaacctcgccctatttcttgttcaccaagcaacgcgtttttctccagaatcagctggaaaatttgtttct 279  Q
    |||||||| | |  |||||||| || ||| ||||| | || |||||||||||||||||| ||||  |||||||||||||||||||||   |||| ||  |    
T  25020147 tggtttacacgagctttatcttttttaagaaaaccacaccttatttcttgttcaccaagtaacgtatttttctccagaatcagctggccgattttttctt 25020048  T
Q  280 aaaatataaacaatattttaggattccttggtggtg-tgtttggcggttcctaaagatgttcctactttttaggagttaccatatttgt 367  Q
    ||| |||| |||| | |||||||||||||||||||| | |||||||||||||||| | | || |||||||||||||||  |||||||||    
T  25020047 aaagtatagacaacaatttaggattccttggtggtgttatttggcggttcctaaaaacgatcatactttttaggagttgtcatatttgt 25019959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 80 - 166
Target Start/End: Original strand, 17042064 - 17042153
Alignment:
Q  80 tttgggtattggcttcatttttgctaaaacaaatattcatgtatg---ttggatacgatgttccaacatcttggcacggttcagtgtgcc 166  Q
    |||| |||||||||||||| ||||||||||||||| |||||||||   |||||||||||||||| ||||| |||||||||||||||||||    
T  17042064 tttgagtattggcttcattgttgctaaaacaaatactcatgtatgatgttggatacgatgttccgacatcctggcacggttcagtgtgcc 17042153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 388 - 442
Target Start/End: Complemental strand, 8225533 - 8225479
Alignment:
Q  388 aatatatttctaaagaatatttgtttcaatatatttctgaaaagaatatttgata 442  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8225533 aatatatttctaaagaatatttgtttcaatatatttctgaaaagaatatttgata 8225479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 388 - 442
Target Start/End: Original strand, 20747533 - 20747587
Alignment:
Q  388 aatatatttctaaagaatatttgtttcaatatatttctgaaaagaatatttgata 442  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20747533 aatatatttctaaagaatatttgtttcaatatatttctgaaaagaatatttgata 20747587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 88 - 169
Target Start/End: Complemental strand, 13920350 - 13920266
Alignment:
Q  88 ttggcttcatttttgctaaaacaaatattcatgt---atgttggatacgatgttccaacatcttggcacggttcagtgtgccctg 169  Q
    ||||||||| ||||||||||||||||||||||||   |||||||||||||||||| |||||| | |||| |||||||||||||||    
T  13920350 ttggcttcacttttgctaaaacaaatattcatgtgtgatgttggatacgatgttctaacatcctagcacagttcagtgtgccctg 13920266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 389 - 442
Target Start/End: Original strand, 15674583 - 15674636
Alignment:
Q  389 atatatttctaaagaatatttgtttcaatatatttctgaaaagaatatttgata 442  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  15674583 atatatttctgaagaatatttgtttcaatatatttctgaaaagaatatttgata 15674636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 88 - 168
Target Start/End: Original strand, 7495260 - 7495343
Alignment:
Q  88 ttggcttcatttttgctaaaacaaatattcatgt---atgttggatacgatgttccaacatcttggcacggttcagtgtgccct 168  Q
    ||||||||| ||||||||||||||||||||||||   |||||||||||| |||| ||||||| | |||| ||||||||||||||    
T  7495260 ttggcttcacttttgctaaaacaaatattcatgtgtgatgttggatacgttgttacaacatcctagcacagttcagtgtgccct 7495343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 88 - 169
Target Start/End: Original strand, 7478497 - 7478581
Alignment:
Q  88 ttggcttcatttttgctaaaacaaatattcatgt---atgttggatacgatgttccaacatcttggcacggttcagtgtgccctg 169  Q
    ||||||| | ||||||||||||||||||||||||   ||||||||||||||||||||||||| | |||| ||||  |||||||||    
T  7478497 ttggctttacttttgctaaaacaaatattcatgtgtgatgttggatacgatgttccaacatcctagcacagttctatgtgccctg 7478581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 400 - 442
Target Start/End: Complemental strand, 11656711 - 11656669
Alignment:
Q  400 aagaatatttgtttcaatatatttctgaaaagaatatttgata 442  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  11656711 aagaatatttgtttcaatatatttctgaaaagaatatttgata 11656669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 88 - 169
Target Start/End: Complemental strand, 13914625 - 13914541
Alignment:
Q  88 ttggcttcatttttgctaaaacaaatattcatgt---atgttggatacgatgttccaacatcttggcacggttcagtgtgccctg 169  Q
    |||| |||| ||||||||||| ||||||||||||   |||||||||||||||||||| |||| | |||| |||||||||||||||    
T  13914625 ttggtttcacttttgctaaaataaatattcatgtgtgatgttggatacgatgttccatcatcctagcacagttcagtgtgccctg 13914541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 361 - 443
Target Start/End: Original strand, 214800 - 214892
Alignment:
Q  361 tatttgtgaaatatattttcaaaagaga---------atatatttctaaagaatatttgtttcaatatatttctg-aaaagaatatttgatat 443  Q
    ||||||||||||||||||||||||||||         |||||||| | || |||||||||||||||||||||||| |||||||||||||||||    
T  214800 tatttgtgaaatatattttcaaaagagattttggaagatatatttttgaaaaatatttgtttcaatatatttctgaaaaagaatatttgatat 214892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 122 - 172
Target Start/End: Original strand, 979730 - 979780
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgccctgttt 172  Q
    |||||||||| ||||||||||||||| |||||||||||||||||| |||||    
T  979730 atgttggatatgatgttccaacatctcggcacggttcagtgtgccttgttt 979780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 122 - 172
Target Start/End: Original strand, 3551828 - 3551878
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgccctgttt 172  Q
    |||||||||| |||||||||||||| ||||||||||||||||||| |||||    
T  3551828 atgttggatatgatgttccaacatcgtggcacggttcagtgtgccttgttt 3551878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 325 - 367
Target Start/End: Original strand, 7495501 - 7495543
Alignment:
Q  325 gttcctaaagatgttcctactttttaggagttaccatatttgt 367  Q
    |||||||||||||||||||||||||||||||| ||||||||||    
T  7495501 gttcctaaagatgttcctactttttaggagtttccatatttgt 7495543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 326 - 367
Target Start/End: Original strand, 7478735 - 7478776
Alignment:
Q  326 ttcctaaagatgttcctactttttaggagttaccatatttgt 367  Q
    ||||||||||||||||||||||||||||||| ||||||||||    
T  7478735 ttcctaaagatgttcctactttttaggagtttccatatttgt 7478776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 122 - 166
Target Start/End: Original strand, 18063556 - 18063600
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgcc 166  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||    
T  18063556 atgttggatacgacgttccaacatcctggcacggttcagtgtgcc 18063600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 122 - 165
Target Start/End: Original strand, 13514967 - 13515010
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgc 165  Q
    ||||||||||||||||||||||||| | ||||||||||||||||    
T  13514967 atgttggatacgatgttccaacatcctagcacggttcagtgtgc 13515010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 122 - 164
Target Start/End: Original strand, 286249 - 286291
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtg 164  Q
    ||||||||||||||||||||||||| | |||||||||||||||    
T  286249 atgttggatacgatgttccaacatcctagcacggttcagtgtg 286291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 122 - 164
Target Start/End: Original strand, 6578898 - 6578940
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtg 164  Q
    ||||||||||||||||||||||||| || ||||||||||||||    
T  6578898 atgttggatacgatgttccaacatcctgacacggttcagtgtg 6578940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 122 - 164
Target Start/End: Original strand, 7028420 - 7028462
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtg 164  Q
    ||||||||||||||| |||||||| ||||||||||||||||||    
T  7028420 atgttggatacgatgctccaacattttggcacggttcagtgtg 7028462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 325 - 367
Target Start/End: Complemental strand, 13914384 - 13914342
Alignment:
Q  325 gttcctaaagatgttcctactttttaggagttaccatatttgt 367  Q
    ||||| |||||||||||||||||||||||||| ||||||||||    
T  13914384 gttccaaaagatgttcctactttttaggagtttccatatttgt 13914342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 396 - 434
Target Start/End: Original strand, 20747634 - 20747672
Alignment:
Q  396 tctaaagaatatttgtttcaatatatttctgaaaagaat 434  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  20747634 tctaaagaatatttgtttcaatatatttatgaaaagaat 20747672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 95 - 172
Target Start/End: Original strand, 21253314 - 21253396
Alignment:
Q  95 catttttgctaaaacaaatattcatgtatgt-----tggatacgatgttccaacatcttggcacggttcagtgtgccctgttt 172  Q
    |||| |||||||||||||||| ||||| |||     | ||||||||||||||||||| || |||||||||||||||| |||||    
T  21253314 cattattgctaaaacaaatatccatgtttgtgttgttagatacgatgttccaacatcctgacacggttcagtgtgccttgttt 21253396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 94 - 177
Target Start/End: Original strand, 3444372 - 3444457
Alignment:
Q  94 tcatttttgctaaaacaaatattcatgta---tgttggatacgatgttccaacatcttggcacggttcagtgtgccctgtttatgtg 177  Q
    ||||| ||||||||| ||||||||||| |   |||||||||||||||||| ||||  ||| |||||||||||||| ||| |||||||    
T  3444372 tcattattgctaaaataaatattcatgcaagatgttggatacgatgttcctacat-gtggtacggttcagtgtgctctgattatgtg 3444457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 157
Target Start/End: Complemental strand, 28051948 - 28051913
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggtt 157  Q
    ||||||||||||||||||||||||| ||||||||||    
T  28051948 atgttggatacgatgttccaacatcctggcacggtt 28051913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 325 - 367
Target Start/End: Complemental strand, 13918425 - 13918383
Alignment:
Q  325 gttcctaaagatgttcctactttttaggagttaccatatttgt 367  Q
    ||||||||| |||| ||||||||||||||||| ||||||||||    
T  13918425 gttcctaaatatgtccctactttttaggagtttccatatttgt 13918383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 122 - 164
Target Start/End: Original strand, 18482722 - 18482764
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtg 164  Q
    ||||||||||||||||| ||||||| || ||||||||||||||    
T  18482722 atgttggatacgatgtttcaacatcctgacacggttcagtgtg 18482764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 145
Target Start/End: Original strand, 6578584 - 6578649
Alignment:
Q  85 gtattggcttcatttttgctaaaacaaatattcatgt-----atgttggatacgatgttccaacat 145  Q
    ||||||||| |||| |||||||||||||||| |||||     ||||||||||| ||||||||||||    
T  6578584 gtattggctgcattattgctaaaacaaatatccatgtttgtgatgttggatactatgttccaacat 6578649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 121
Target Start/End: Original strand, 6578807 - 6578848
Alignment:
Q  80 tttgggtattggcttcatttttgctaaaacaaatattcatgt 121  Q
    |||| |||||||||||||| ||||||||||||||| ||||||    
T  6578807 tttgagtattggcttcattgttgctaaaacaaatactcatgt 6578848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 161
Target Start/End: Complemental strand, 8749866 - 8749787
Alignment:
Q  86 tattggcttcatttttgc-taaaacaaatattcatgt---atgttggatacgatgttccaacatcttggcacggttcagt 161  Q
    ||||||||||| |||||| ||||||||||||||||||   |||||| | | ||||| |||||||| ||||| ||||||||    
T  8749866 tattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacatgatgtgccaacatcctggcatggttcagt 8749787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 441
Target Start/End: Complemental strand, 11656851 - 11656811
Alignment:
Q  400 aagaatatttgtttcaatatatttctgaaaagaatatttgat 441  Q
    |||||||||||||||||||||||||| |||| ||||||||||    
T  11656851 aagaatatttgtttcaatatatttct-aaaaaaatatttgat 11656811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 353
Target Start/End: Original strand, 17042298 - 17042335
Alignment:
Q  316 tgtttggcggttcctaaagatgttcctactttttagga 353  Q
    |||||||  |||||||||||||||||||||||||||||    
T  17042298 tgtttggaagttcctaaagatgttcctactttttagga 17042335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 122 - 166
Target Start/End: Original strand, 17135494 - 17135538
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgcc 166  Q
    |||||||||| |||| ||||||||| ||||||||||| |||||||    
T  17135494 atgttggatatgatgctccaacatcctggcacggttcggtgtgcc 17135538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 122 - 166
Target Start/End: Complemental strand, 24196335 - 24196291
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgcc 166  Q
    ||||||||| ||||| | ||||||| |||||||||||||||||||    
T  24196335 atgttggatgcgatgcttcaacatcctggcacggttcagtgtgcc 24196291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 259; Significance: 1e-144; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 85 - 438
Target Start/End: Complemental strand, 10723134 - 10722772
Alignment:
Q  85 gtattggcttcatttttgctaaaacaaatattcatgtatgttggatacgatgttccaacatcttggcacggttcagtgtgccctgtttatgtggcttggt 184  Q
    |||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  10723134 gtattggcttcattgttgctagaacaaatagtcatgtatgttggatacgatgttccaacatcttggcacggttcagtgttccctgtttatgtggcttggt 10723035  T
Q  185 ttacgcaatatttatcttattaaagaaacctcgccctatttcttgttcaccaagcaacgcgtttttctccagaatcagctggaaaatttgtttctaaaat 284  Q
    ||||||||| ||||||||||||| |||||| | ||||||||||||||||||||||| ||||||||| ||||  ||||| ||||| |||||||||||||||    
T  10723034 ttacgcaatctttatcttattaaggaaaccacaccctatttcttgttcaccaagcagcgcgtttttgtccatgatcagttggaagatttgtttctaaaat 10722935  T
Q  285 ataaacaatattttaggattccttggtggtgtgtttggcggttcctaaagatgttcctactttttaggagttaccatatttgtgaaatatattttcaaaa 384  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10722934 ataaacagtattttaggattccttggtggtgtgtttggcggttcctaaagatgttcctactttttaggagttaccatatttgtgaaatatattttcaaaa 10722835  T
Q  385 gag---------aatatatttctaaagaatatttgtttcaatatatttctgaaaagaatattt 438  Q
    |||         ||||||||||| ||||| |||||||||||||||||||| ||||||||||||    
T  10722834 gagattttgaaaaatatatttctgaagaagatttgtttcaatatatttctaaaaagaatattt 10722772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 85 - 438
Target Start/End: Complemental strand, 10936903 - 10936541
Alignment:
Q  85 gtattggcttcatttttgctaaaacaaatattcatgtatgttggatacgatgttccaacatcttggcacggttcagtgtgccctgtttatgtggcttggt 184  Q
    |||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  10936903 gtattggcttcattgttgctagaacaaatagtcatgtatgttggatacgatgttccaacatcttggcacggttcagtgttccctgtttatgtggcttggt 10936804  T
Q  185 ttacgcaatatttatcttattaaagaaacctcgccctatttcttgttcaccaagcaacgcgtttttctccagaatcagctggaaaatttgtttctaaaat 284  Q
    ||||||||| ||||||||||||| |||||| | ||||||||||||||||||||||| ||||||||| ||||  ||||| ||||| |||||||||||||||    
T  10936803 ttacgcaatctttatcttattaaggaaaccacaccctatttcttgttcaccaagcagcgcgtttttgtccatgatcagttggaagatttgtttctaaaat 10936704  T
Q  285 ataaacaatattttaggattccttggtggtgtgtttggcggttcctaaagatgttcctactttttaggagttaccatatttgtgaaatatattttcaaaa 384  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10936703 ataaacagtattttaggattccttggtggtgtgtttggcggttcctaaagatgttcctactttttaggagttaccatatttgtgaaatatattttcaaaa 10936604  T
Q  385 gag---------aatatatttctaaagaatatttgtttcaatatatttctgaaaagaatattt 438  Q
    |||         ||||||||||| ||||| |||||||||||||||||||| ||||||||||||    
T  10936603 gagattttgaaaaatatatttctgaagaagatttgtttcaatatatttctaaaaagaatattt 10936541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 80 - 441
Target Start/End: Complemental strand, 21479254 - 21478893
Alignment:
Q  80 tttgggtattggcttcatttttgctaaaacaaatattcatgtat---gttggatacgatgttccaacatcttggcacggttcagtgtgccctgtttatgt 176  Q
    |||| |||||||||||||| ||| ||||||||||| ||||||||   |||||||| |||||||||||||||||||||  |||| |||| |||| ||||||    
T  21479254 tttgagtattggcttcattgttgttaaaacaaatactcatgtataatgttggataggatgttccaacatcttggcacaattcaatgtgtcctgcttatgt 21479155  T
Q  177 ggcttggtttacgcaatatttatcttattaaagaaacctcgccctatttcttgttcaccaagcaacgcgtttttctccagaatcagctggaaaatttgtt 276  Q
    |||||||||||||||||  |||            |||| ||||||||||||||||||||||||| ||||||||| |||||||||||| |||| |||||||    
T  21479154 ggcttggtttacgcaatcctta------------aaccacgccctatttcttgttcaccaagcagcgcgtttttgtccagaatcagccggaagatttgtt 21479067  T
Q  277 tctaaaatataaacaatattttaggattccttggtggtgtgtttggcggttcctaaagatgttcctactttttaggagttaccatatttgtgaaatatat 376  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  21479066 tctaaaatataaacaatattttaggattccttggtggtgtgtttgatggttcctaaagatgttcctactttctaggagttaccatatttgtgaaatatat 21478967  T
Q  377 tttcaaaagag---------aatatatttctaaagaatatttgtttcaatatatttctgaaaagaatatttgat 441  Q
    |||||||||||         ||||||||||| |||||||||||||| ||||||||||| |||||||||||||||    
T  21478966 tttcaaaagagattttggaaaatatatttctgaagaatatttgttttaatatatttctaaaaagaatatttgat 21478893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 94 - 351
Target Start/End: Original strand, 10197566 - 10197825
Alignment:
Q  94 tcatttttgctaaaacaaatattcatgtatg---ttggatacgatgttccaacatcttggcacggttcagtgtgccctgtttatgtggcttggtttacgc 190  Q
    ||||| |||||||||||||||||||| ||||   ||||||| |||||||||||||||||||||||||||||||||| ||||||| || || | | |||||    
T  10197566 tcattattgctaaaacaaatattcatttatgatgttggatatgatgttccaacatcttggcacggttcagtgtgccatgtttatttgcctagctatacgc 10197665  T
Q  191 aatatttatcttattaaagaaacctcgccctatttcttgttcaccaagcaacgcgtttttctccagaatcagctggaaaatttgtttctaaaatataaac 290  Q
    |   ||||||||||||| | | || |||| || |||||||| |||||| ||||||||||| ||||||||||||||    ||||||| |||||||||| ||    
T  10197666 acactttatcttattaaggcatccacgccttaattcttgttaaccaagtaacgcgtttttgtccagaatcagctgagtgatttgttcctaaaatatagac 10197765  T
Q  291 aatattttaggattccttggtggtgtgtttggcggttcctaaagatgttcctactttttag 351  Q
    |||||||||||| || |||||||||| |||||  |||||||||||||||||||||||||||    
T  10197766 aatattttaggaatctttggtggtgt-tttggtagttcctaaagatgttcctactttttag 10197825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 122 - 353
Target Start/End: Complemental strand, 16616756 - 16616525
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgccctgtttatgtggcttggtttacgcaatatttatcttattaaagaaacctcgccct 221  Q
    ||||||||| ||||||||||| |||||||||| |||||||||||||||||| ||||||||||||| | |    ||||||||||||| |||||| |||| |    
T  16616756 atgttggattcgatgttccaatatcttggcacagttcagtgtgccctgtttgtgtggcttggttttcacgcgctttatcttattaaggaaaccacgccat 16616657  T
Q  222 atttcttgttcaccaagcaacgcgtttttctccagaatcagctggaaaatttgtttctaaaatataaacaatattttaggattccttggtggtgtgtttg 321  Q
    ||||||||||||||||| | ||  ||||| || ||||||| |||||| ||||||| ||||| |||| |||||||||| ||||| ||||||||||| ||||    
T  16616656 atttcttgttcaccaagtatcgtatttttgtctagaatcatctggaagatttgttcctaaagtatagacaatattttgggatttcttggtggtgtttttg 16616557  T
Q  322 gcggttcctaaagatgttcctactttttagga 353  Q
    || ||||||||||||||||| ||||| |||||    
T  16616556 gcagttcctaaagatgttcccactttatagga 16616525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 84 - 204
Target Start/End: Complemental strand, 10683095 - 10682975
Alignment:
Q  84 ggtattggcttcatttttgctaaaacaaatattcatgtatgttggatacgatgttccaacatcttggcacggttcagtgtgccctgtttatgtggcttgg 183  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  10683095 ggtattggcttcattgttgctaaaacaaatactcatgtatgttggatacgatgttccaacatcttggcacggttcagtgtgccctgtttatgtggcttga 10682996  T
Q  184 tttacgcaatatttatcttat 204  Q
    |||||||||| ||||||||||    
T  10682995 tttacgcaatctttatcttat 10682975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 84 - 204
Target Start/End: Complemental strand, 10896735 - 10896615
Alignment:
Q  84 ggtattggcttcatttttgctaaaacaaatattcatgtatgttggatacgatgttccaacatcttggcacggttcagtgtgccctgtttatgtggcttgg 183  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  10896735 ggtattggcttcattgttgctaaaacaaatactcatgtatgttggatacgatgttccaacatcttggcacggttcagtgtgccctgtttatgtggcttga 10896636  T
Q  184 tttacgcaatatttatcttat 204  Q
    |||||||||| ||||||||||    
T  10896635 tttacgcaatctttatcttat 10896615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 122 - 355
Target Start/End: Original strand, 16654684 - 16654918
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgccctgtttatgtggcttggtttacgcaatatttatcttattaaagaaacctcgccct 221  Q
    |||||||||| |||||| ||||||| |||||  |||||||||||||||||| ||||||||||||| | | |  |||||||| |||||||||||  ||| |    
T  16654684 atgttggatatgatgtttcaacatcctggcatagttcagtgtgccctgtttgtgtggcttggttttcacgagctttatctttttaaagaaaccaagcctt 16654783  T
Q  222 atttcttgttcaccaagcaacgcgtttttctccagaatcagctggaaaatttgtttctaaaatataaacaatattttaggattccttggtggt-gtgttt 320  Q
    |||||| ||||| |||| |||   ||||| |||||||||||||||   ||||||| ||||| |||| ||||||||||||||||||||||||||  |||||    
T  16654784 atttctcgttcaacaagtaacatatttttgtccagaatcagctgggtgatttgttcctaaagtatagacaatattttaggattccttggtggtattgttt 16654883  T
Q  321 ggcggttcctaaagatgttcctactttttaggagt 355  Q
    |||||||||||||||| |||||||||| |||||||    
T  16654884 ggcggttcctaaagatattcctactttataggagt 16654918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 85 - 204
Target Start/End: Complemental strand, 10718321 - 10718203
Alignment:
Q  85 gtattggcttcatttttgctaaaacaaatattcatgtatgttggatacgatgttccaacatcttggcacggttcagtgtgccctgtttatgtggcttggt 184  Q
    |||||||||||||| || ||||| |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |    
T  10718321 gtattggcttcattgtttctaaa-caaatactcatgtatgttggatacgatgttccaacatcctggcacggttcagtgtgccctgtttatgtggcttgat 10718223  T
Q  185 ttacgcaatatttatcttat 204  Q
    ||| ||||| ||||||||||    
T  10718222 ttatgcaatctttatcttat 10718203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 85 - 204
Target Start/End: Complemental strand, 10932090 - 10931972
Alignment:
Q  85 gtattggcttcatttttgctaaaacaaatattcatgtatgttggatacgatgttccaacatcttggcacggttcagtgtgccctgtttatgtggcttggt 184  Q
    |||||||||||||| || ||||| |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |    
T  10932090 gtattggcttcattgtttctaaa-caaatactcatgtatgttggatacgatgttccaacatcctggcacggttcagtgtgccctgtttatgtggcttgat 10931992  T
Q  185 ttacgcaatatttatcttat 204  Q
    ||| ||||| ||||||||||    
T  10931991 ttatgcaatctttatcttat 10931972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 122 - 295
Target Start/End: Complemental strand, 49975058 - 49974885
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgccctgtttatgtggcttggtttacgcaatatttatcttattaaagaaacctcgccct 221  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| | |  |||||||| |||| |||||| |||| |    
T  49975058 atgttggatacgatgttccaacatcctggcacgattcagtgtgccctgtttatgtggcttggtttacacgagctttatctttttaaggaaaccacgcctt 49974959  T
Q  222 atttcttgttcaccaagcaacgcgtttttctccagaatcagctggaaaatttgtttctaaaatataaacaatat 295  Q
    ||||||||||||||||| |||   ||||| |||| |||||||||    ||||||| ||||| |||| |||||||    
T  49974958 atttcttgttcaccaagtaacatatttttgtccataatcagctgagtgatttgttcctaaagtatagacaatat 49974885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 394 - 442
Target Start/End: Complemental strand, 21478800 - 21478752
Alignment:
Q  394 tttctaaagaatatttgtttcaatatatttctgaaaagaatatttgata 442  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  21478800 tttctaaagaatatttgtttcaatatatttctgaaaagaatatttgata 21478752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 80 - 152
Target Start/End: Original strand, 16654599 - 16654674
Alignment:
Q  80 tttgggtattggcttcatttttgctaaaacaaatattcatgt---atgttggatacgatgttccaacatcttggca 152  Q
    |||| |||||||||||||| ||||||||||||||||||||||   |||||||||| | ||||||||||||||||||    
T  16654599 tttgtgtattggcttcattattgctaaaacaaatattcatgtacgatgttggatatgttgttccaacatcttggca 16654674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 394 - 442
Target Start/End: Complemental strand, 10722676 - 10722628
Alignment:
Q  394 tttctaaagaatatttgtttcaatatatttctgaaaagaatatttgata 442  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  10722676 tttctaaagaatatttgcttcaatatatttctgaaaagaatatttgata 10722628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 394 - 442
Target Start/End: Complemental strand, 10936445 - 10936397
Alignment:
Q  394 tttctaaagaatatttgtttcaatatatttctgaaaagaatatttgata 442  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  10936445 tttctaaagaatatttgcttcaatatatttctgaaaagaatatttgata 10936397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 80 - 159
Target Start/End: Complemental strand, 33746775 - 33746693
Alignment:
Q  80 tttgggtattggcttcatttttgctaaaacaaatattcatgt---atgttggatacgatgttccaacatcttggcacggttca 159  Q
    |||| |||||||||||||| ||||||||||||||| ||||||   |||||||||||||||||| |||||| |||| |||||||    
T  33746775 tttgagtattggcttcattgttgctaaaacaaatactcatgtatgatgttggatacgatgttctaacatcctggcgcggttca 33746693  T

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Target: chr4; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 79 - 161
Target Start/End: Complemental strand, 33744327 - 33744242
Alignment:
Q  79 gtttgggtattggcttcatttttgctaaaacaaatattcatgt---atgttggatacgatgttccaacatcttggcacggttcagt 161  Q
    ||||| |||||||||| ||| ||||||||||||||| ||||||   |||||||||| |||||||||||||| | ||||||||||||    
T  33744327 gtttgagtattggcttaattgttgctaaaacaaatactcatgtatgatgttggataagatgttccaacatcctagcacggttcagt 33744242  T

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Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 92 - 169
Target Start/End: Complemental strand, 31971757 - 31971677
Alignment:
Q  92 cttcatttttgctaaaacaaatattcatgt---atgttggatacgatgttccaacatcttggcacggttcagtgtgccctg 169  Q
    ||||| ||||||||||| ||||||||||||   |||||| |||||||||||||||||| | |||| |||||||||||||||    
T  31971757 cttcacttttgctaaaataaatattcatgtgtgatgttgtatacgatgttccaacatcctagcacagttcagtgtgccctg 31971677  T

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Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 86 - 152
Target Start/End: Original strand, 18006065 - 18006134
Alignment:
Q  86 tattggcttcatttttgctaaaacaaatattcatg---tatgttggatacgatgttccaacatcttggca 152  Q
    ||||||||||||| || ||||||||||||||||||    |||||||||||||||||||||||| ||||||    
T  18006065 tattggcttcattatttctaaaacaaatattcatgcatgatgttggatacgatgttccaacatgttggca 18006134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 325 - 367
Target Start/End: Complemental strand, 31971520 - 31971478
Alignment:
Q  325 gttcctaaagatgttcctactttttaggagttaccatatttgt 367  Q
    |||||||||||||||||||||||||||||||| ||||||||||    
T  31971520 gttcctaaagatgttcctactttttaggagtttccatatttgt 31971478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 405 - 442
Target Start/End: Complemental strand, 50908419 - 50908382
Alignment:
Q  405 tatttgtttcaatatatttctgaaaagaatatttgata 442  Q
    ||||||||||||||||||||||||||||||||||||||    
T  50908419 tatttgtttcaatatatttctgaaaagaatatttgata 50908382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 122 - 166
Target Start/End: Complemental strand, 9069754 - 9069710
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgcc 166  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||    
T  9069754 atgttggatacgatgttccaacatcctggaacggttcagtgtgcc 9069710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 122 - 166
Target Start/End: Original strand, 18601009 - 18601053
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgcc 166  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||    
T  18601009 atgttggatacgatgctccaacatcctggcacggttcagtgtgcc 18601053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 407 - 442
Target Start/End: Complemental strand, 16616351 - 16616316
Alignment:
Q  407 tttgtttcaatatatttctgaaaagaatatttgata 442  Q
    ||||||||||||||||||||||||||||||||||||    
T  16616351 tttgtttcaatatatttctgaaaagaatatttgata 16616316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 86 - 161
Target Start/End: Original strand, 11324600 - 11324679
Alignment:
Q  86 tattggcttcatttttgc-taaaacaaatattcatgt---atgttggatacgatgttccaacatcttggcacggttcagt 161  Q
    ||||||||||| |||||| ||||||||||||||||||   |||||| | | ||||| |||||||||||||| ||||||||    
T  11324600 tattggcttcacttttgcctaaaacaaatattcatgtgagatgttgtacaagatgtgccaacatcttggcatggttcagt 11324679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 122 - 166
Target Start/End: Complemental strand, 15623246 - 15623202
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgcc 166  Q
    ||||||||||||||||||||||||| |||||||||| ||| ||||    
T  15623246 atgttggatacgatgttccaacatcctggcacggttaagtatgcc 15623202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 88 - 170
Target Start/End: Original strand, 15687033 - 15687119
Alignment:
Q  88 ttggcttcatttttgc-taaaacaaatattcatgt---atgttggatacgatgttccaacatcttggcacggttcagtgtgccctgt 170  Q
    ||||||||| |||||| ||||||||||||||| ||   |||||| | |||||||||||||||| ||||| ||||| || ||||||||    
T  15687033 ttggcttcacttttgcctaaaacaaatattcaagtgtgatgttgtacacgatgttccaacatcctggcatggttcggtatgccctgt 15687119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 122 - 166
Target Start/End: Original strand, 15699685 - 15699729
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgcc 166  Q
    ||||||||| ||||||||||||||| |||||| ||||||||||||    
T  15699685 atgttggatccgatgttccaacatcctggcacagttcagtgtgcc 15699729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 165
Target Start/End: Complemental strand, 10725007 - 10724964
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgc 165  Q
    ||||||||||||||||||||||||| |||||| ||| |||||||    
T  10725007 atgttggatacgatgttccaacatcctggcacagtttagtgtgc 10724964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 165
Target Start/End: Complemental strand, 10938776 - 10938733
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgc 165  Q
    ||||||||||||||||||||||||| |||||| ||| |||||||    
T  10938776 atgttggatacgatgttccaacatcctggcacagtttagtgtgc 10938733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 438
Target Start/End: Complemental strand, 16616276 - 16616225
Alignment:
Q  388 aatatatttctaaagaat-atttgtttcaatatatttctgaaaagaatattt 438  Q
    ||||||||||| |||||| ||||||||||| |||||||||| ||||||||||    
T  16616276 aatatatttctgaagaattatttgtttcaacatatttctgagaagaatattt 16616225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 165
Target Start/End: Original strand, 19183031 - 19183074
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgc 165  Q
    ||||||||||||||||||  ||||| ||||||||||||||||||    
T  19183031 atgttggatacgatgttctgacatcctggcacggttcagtgtgc 19183074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 161
Target Start/End: Complemental strand, 41786243 - 41786204
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagt 161  Q
    |||||||||| |||||||||||||| ||||||||||||||    
T  41786243 atgttggatatgatgttccaacatcctggcacggttcagt 41786204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 166
Target Start/End: Complemental strand, 2680576 - 2680501
Alignment:
Q  94 tcatttttgctaaaacaaatattcatgta---tgttggatacgatgttccaacatcttggcacggttcagtgtgcc 166  Q
    ||||| ||||||||||||||||||| |||   ||||||||   ||||| |||||| |||| |||||||||||||||    
T  2680576 tcattgttgctaaaacaaatattcaagtaagatgttggatcaaatgtttcaacatgttggtacggttcagtgtgcc 2680501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 145
Target Start/End: Complemental strand, 10683322 - 10683257
Alignment:
Q  85 gtattggcttcatttttgctaaaacaaatattcatgt-----atgttggatacgatgttccaacat 145  Q
    ||||||||| |||| |||||||||||||||| |||||     ||||||||||| ||||||||||||    
T  10683322 gtattggctgcattattgctaaaacaaatatccatgtttgtgatgttggatactatgttccaacat 10683257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 145
Target Start/End: Complemental strand, 10723373 - 10723308
Alignment:
Q  85 gtattggcttcatttttgctaaaacaaatattcatgt-----atgttggatacgatgttccaacat 145  Q
    ||||||||| |||| |||||||||||||||| |||||     ||||||||||| ||||||||||||    
T  10723373 gtattggctacattattgctaaaacaaatatccatgtttgtgatgttggatactatgttccaacat 10723308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 145
Target Start/End: Complemental strand, 10896962 - 10896897
Alignment:
Q  85 gtattggcttcatttttgctaaaacaaatattcatgt-----atgttggatacgatgttccaacat 145  Q
    ||||||||| |||| |||||||||||||||| |||||     ||||||||||| ||||||||||||    
T  10896962 gtattggctgcattattgctaaaacaaatatccatgtttgtgatgttggatactatgttccaacat 10896897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 145
Target Start/End: Complemental strand, 10937142 - 10937077
Alignment:
Q  85 gtattggcttcatttttgctaaaacaaatattcatgt-----atgttggatacgatgttccaacat 145  Q
    ||||||||| |||| |||||||||||||||| |||||     ||||||||||| ||||||||||||    
T  10937142 gtattggctacattattgctaaaacaaatatccatgtttgtgatgttggatactatgttccaacat 10937077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 161
Target Start/End: Original strand, 19894145 - 19894224
Alignment:
Q  86 tattggcttcatttttgc-taaaacaaatattcatgt---atgttggatacgatgttccaacatcttggcacggttcagt 161  Q
    ||||||||||| |||||| ||||||||||||||||||   |||||| | ||||||| |||||||| ||||| | ||||||    
T  19894145 tattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcctggcatgattcagt 19894224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 70
Target Start/End: Complemental strand, 5074171 - 5074123
Alignment:
Q  22 ttacagtgagtgcaaaattcaggcaatcccttgtattcgatttccaccg 70  Q
    ||||||||||||||||| |||||||| || | |||||| ||||||||||    
T  5074171 ttacagtgagtgcaaaagtcaggcaacccatcgtattcaatttccaccg 5074123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 327 - 367
Target Start/End: Original strand, 15699891 - 15699931
Alignment:
Q  327 tcctaaagatgttcctactttttaggagttaccatatttgt 367  Q
    |||||||||||||||||| |||||||| || ||||||||||    
T  15699891 tcctaaagatgttcctacattttaggactttccatatttgt 15699931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 122 - 166
Target Start/End: Complemental strand, 16384700 - 16384656
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgcc 166  Q
    ||||||||||||||| ||||||||| || ||| ||||||||||||    
T  16384700 atgttggatacgatgctccaacatcctgacacagttcagtgtgcc 16384656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 86 - 152
Target Start/End: Complemental strand, 22555801 - 22555731
Alignment:
Q  86 tattggcttcatttttgc-taaaacaaatattcatgt---atgttggatacgatgttccaacatcttggca 152  Q
    ||||||||||| |||||| ||||||||||||||||||   |||||| | | ||||| ||||||||||||||    
T  22555801 tattggcttcacttttgcctaaaacaaatattcatgtgagatgttgtacaagatgtgccaacatcttggca 22555731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 122 - 166
Target Start/End: Complemental strand, 32862454 - 32862410
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgcc 166  Q
    |||||||||| |||||||||||||| ||  |||||||||||||||    
T  32862454 atgttggatatgatgttccaacatcctgatacggttcagtgtgcc 32862410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 85 - 125
Target Start/End: Complemental strand, 41786319 - 41786279
Alignment:
Q  85 gtattggcttcatttttgctaaaacaaatattcatgtatgt 125  Q
    ||||||||| |||| |||||||||||||||| |||||||||    
T  41786319 gtattggctgcattattgctaaaacaaatatccatgtatgt 41786279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 259; Significance: 1e-144; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 80 - 441
Target Start/End: Original strand, 36397797 - 36398167
Alignment:
Q  80 tttgggtattggcttcatttttgctaaaacaaatattcatgtatgttggatacgatgttccaacatcttggcacggttcagtgtgccctgtttatgtggc 179  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36397797 tttgggtattggcttcattgttgctaaaacaaatactcatgtatgttggatacgatgttccaacatcttggcacggttcagtgtgccctgtttatgtggc 36397896  T
Q  180 ttggtttacgcaatatttatcttattaaagaaacctcgccctatttcttgttcaccaagcaacgcgtttttctccagaatcagctggaaaatttgtttct 279  Q
    |||||||||||||| ||||||||||||| |||||  || |||||||||||||||||||||||||||||||| |||||||||| || ||| ||||||||||    
T  36397897 ttggtttacgcaatctttatcttattaaggaaactacgtcctatttcttgttcaccaagcaacgcgtttttgtccagaatcatctagaagatttgtttct 36397996  T
Q  280 aaaatataaacaatattttaggattccttggtggtgtgtttggcggttcctaaagatgttcctactttttaggagttaccatatttgtgaaatatatttt 379  Q
    ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36397997 aaaatataaacaatattttaggatttcttggtggtgtgtttggcagttcctaaagatgttcctactttttaggagttaccatatttgtgaaatatatttt 36398096  T
Q  380 caaaagag---------aatatatttctaaagaatatttgtttcaatatatttctgaaaagaatatttgat 441  Q
    |||| |||         ||||||| | | ||||||||||||||| |||||||||| |||| ||||||||||    
T  36398097 caaacgagattttggaaaatatatctatgaagaatatttgtttcgatatatttctaaaaataatatttgat 36398167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 129 - 441
Target Start/End: Original strand, 26859346 - 26859667
Alignment:
Q  129 atacgatgttccaacatcttggcacggttcagtgtgccctgtttatgtggcttggtttacgcaatatttatcttattaaagaaacctcgccctatttctt 228  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||| |||| |||||||||||||||||||||| |||||||||||    
T  26859346 atacgatgttccaacatcttggcacggttcattgtgccatgtttatgttgcttggtttacacaatctttatcttattaaagaaacctcaccctatttctt 26859445  T
Q  229 gttcaccaagcaacgcgtttttctccagaatcagctggaaaatttgtttctaaaatataaacaatattttaggattccttggtggtgtgtttggcggttc 328  Q
    ||||||||||||||| |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26859446 gttcaccaagcaacgtgtttttgtccagaatcagctggaagatttgtttctaaaatataaacaatattttaggattccttggtggtgtgtttggcggttc 26859545  T
Q  329 ctaaagatgttcctactttttaggagttaccatatttgtgaaatatattttcaaaagag---------aatatatttctaaagaatatttgtttcaatat 419  Q
     |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||    
T  26859546 ataaagacgttcttactttttaggagttaccatatttgtgaaatatattttcaaaagagattttaaaaaatatatttctaaagaatatttgtttcaatat 26859645  T
Q  420 atttctgaaaagaatatttgat 441  Q
    |||||| |||||||||||||||    
T  26859646 atttctaaaaagaatatttgat 26859667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 80 - 367
Target Start/End: Original strand, 24311157 - 24311448
Alignment:
Q  80 tttgggtattggcttcatttttgctaaaacaaatattcatgtatg---ttggatacgatgttccaacatcttggcacggttcagtgtgccctgtttatgt 176  Q
    |||| |||||||||||||| ||||||||||||||| |||||||||   |||||||| ||||||||||||| ||||||||||||||||||||| ||| |||    
T  24311157 tttgagtattggcttcattgttgctaaaacaaatactcatgtatgatgttggatacaatgttccaacatcctggcacggttcagtgtgccctatttgtgt 24311256  T
Q  177 ggcttggtttacgcaatatttatcttattaaagaaacctcgccctatttcttgttcaccaagcaacgcgtttttctccagaatcagctggaaaatttgtt 276  Q
    |||||||||| ||  |  |||||||| |||| |||||| || | |||||||| ||||||||| ||||  ||||| ||||||||||||| |   |||||||    
T  24311257 ggcttggttttcgtgagttttatctttttaaggaaaccacgtcttatttcttcttcaccaagtaacgaatttttgtccagaatcagctaggtgatttgtt 24311356  T
Q  277 tctaaaatataaacaatattttaggattccttggtggtg-tgtttggcggttcctaaagatgttcctactttttaggagttaccatatttgt 367  Q
    | | || |||| ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  24311357 tatgaagtatagacaatattttaggatcccttggtggtgttgtttggcggttcctaaagatgttcctactttttaggagttgctatatttgt 24311448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 80 - 356
Target Start/End: Complemental strand, 31588335 - 31588056
Alignment:
Q  80 tttgggtattggcttcatttttgctaaaacaaatattcatgtatg---ttggatacgatgttccaacatcttggcacggttcagtgtgccctgtttatgt 176  Q
    |||| |||||| | ||||| ||||||||||||||| |||||||||   |||||||  |||||||||||||||| ||||||||||||||||||||||||||    
T  31588335 tttgagtattgacctcattgttgctaaaacaaatactcatgtatgatgttggatataatgttccaacatcttgtcacggttcagtgtgccctgtttatgt 31588236  T
Q  177 ggcttggtttacgcaatatttatcttattaaagaaacctcgccctatttcttgttcaccaagcaacgcgtttttctccagaatcagctggaaaatttgtt 276  Q
    | ||||||||||||    |||||||| |||| |||||| |||| |||||||||||  ||||| |||   ||||| |||||||||||||||   |||||||    
T  31588235 gccttggtttacgcgtgctttatctttttaaggaaaccgcgccttatttcttgttggccaagtaacatatttttgtccagaatcagctgggttatttgtt 31588136  T
Q  277 tctaaaatataaacaatattttaggattccttggtggtgtgtttggcggttcctaaagatgttcctactttttaggagtt 356  Q
     ||||| |||| |||||||||||||  || |||||||||| || ||  ||| ||||||||||| ||||||||||||||||    
T  31588135 cctaaagtatagacaatattttagggatctttggtggtgttttgggtagtttctaaagatgtttctactttttaggagtt 31588056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 80 - 367
Target Start/End: Original strand, 24312949 - 24313234
Alignment:
Q  80 tttgggtattggcttcatttttgctaaaacaaatattcatgtatg---ttggatacgatgttccaacatcttggcacggttcagtgtgccctgtttatgt 176  Q
    |||| ||||||| |||||| ||||||| ||||||| |||||||||   |||||||| ||||||||| ||| |||||||||||| |||||||||||| |||    
T  24312949 tttgagtattggattcattgttgctaacacaaatactcatgtatgatgttggatacaatgttccaatatcctggcacggttcaatgtgccctgtttgtgt 24313048  T
Q  177 ggcttggtttacgcaatatttatcttattaaagaaacctcgccctatttcttgttcaccaagcaacgcgtttttctccagaatcagctggaaaatttgtt 276  Q
    |||||||||| |||||  ||||| || |||| |||||| || | |||      ||||||||| ||||  ||||| |||| |||||| |||   |||||||    
T  24313049 ggcttggttttcgcaagctttatgtttttaaggaaaccacgtcttat------ttcaccaagtaacgtatttttgtccataatcagttgggtgatttgtt 24313142  T
Q  277 tctaaaatataaacaatattttaggattccttggtggt-gtgtttggcggttcctaaagatgttcctactttttaggagttaccatatttgt 367  Q
     ||||| |||| ||||||||||||||| |||||||||| |||||||||||||| |||||||||||||||| ||||||| || | ||||||||    
T  24313143 cctaaattatagacaatattttaggatcccttggtggtggtgtttggcggttcttaaagatgttcctactctttaggattttctatatttgt 24313234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 86 - 177
Target Start/End: Complemental strand, 27111881 - 27111787
Alignment:
Q  86 tattggcttcatttttgctaaaacaaatattcat---gtatgttggatacgatgttccaacatcttggcacggttcagtgtgccctgtttatgtg 177  Q
    |||||| |||||| ||||||||||||||||||||     ||||||||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  27111881 tattggtttcattattgctaaaacaaatattcataaatgatgttggatacgatgttccaacatcctggcacggttcaatgtgccctgtttatgtg 27111787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 86 - 177
Target Start/End: Original strand, 19197643 - 19197737
Alignment:
Q  86 tattggcttcatttttgctaaaacaaatattcatgt---atgttggatacgatgttccaacatcttggcacggttcagtgtgccctgtttatgtg 177  Q
    ||||||||||||| ||||||||| ||||||||||     |||||||||| ||||||||||||| || |||||||||||||||||||| |||||||    
T  19197643 tattggcttcattattgctaaaaaaaatattcatacttgatgttggatatgatgttccaacatgttagcacggttcagtgtgccctgcttatgtg 19197737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 394 - 442
Target Start/End: Original strand, 26859758 - 26859806
Alignment:
Q  394 tttctaaagaatatttgtttcaatatatttctgaaaagaatatttgata 442  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  26859758 tttctaaagaatatttgtttcaatatatttctgaaaagaatatttgata 26859806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 86 - 177
Target Start/End: Complemental strand, 27108292 - 27108198
Alignment:
Q  86 tattggcttcatttttgctaaaacaaatattcatgtatg---ttggatacgatgttccaacatcttggcacggttcagtgtgccctgtttatgtg 177  Q
    ||||| ||||||| || |||||| ||||||||||  |||   |||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  27108292 tattgacttcattatttctaaaataaatattcatacatgatgttggatacgatgttccaacatcctggcacggttcagtgtgccatgtttatgtg 27108198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 389 - 439
Target Start/End: Original strand, 24311770 - 24311820
Alignment:
Q  389 atatatttctaaagaatatttgtttcaatatatttctgaaaagaatatttg 439  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  24311770 atatatttctgaagaatatttgtttcaatatatttctgaaaagaatatttg 24311820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 388 - 442
Target Start/End: Original strand, 24311796 - 24311852
Alignment:
Q  388 aatatatttct--aaagaatatttgtttcaatatatttctgaaaagaatatttgata 442  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  24311796 aatatatttctgaaaagaatatttgtttcaatatatttctgaaaagaatatttgata 24311852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 389 - 441
Target Start/End: Original strand, 24313385 - 24313437
Alignment:
Q  389 atatatttctaaagaatatttgtttcaatatatttctgaaaagaatatttgat 441  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  24313385 atatatttctgaagaatatttgttttaatatatttctgaaaagaatatttgat 24313437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 394 - 442
Target Start/End: Original strand, 36398259 - 36398307
Alignment:
Q  394 tttctaaagaatatttgtttcaatatatttctgaaaagaatatttgata 442  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  36398259 tttctgaagaatatttgtttcaatatatttctgaaaagaatatttgata 36398307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 86 - 152
Target Start/End: Original strand, 20645604 - 20645673
Alignment:
Q  86 tattggcttcatttttgctaaaacaaatattcatg---tatgttggatacgatgttccaacatcttggca 152  Q
    ||||||||||||| || ||||||||||||||||||    |||||||||||||||||||||||| ||||||    
T  20645604 tattggcttcattatttctaaaacaaatattcatgcatgatgttggatacgatgttccaacatgttggca 20645673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 122 - 172
Target Start/End: Original strand, 21249547 - 21249597
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgccctgttt 172  Q
    ||||||||||||||||||||||||| |||||||||| |||||||| |||||    
T  21249547 atgttggatacgatgttccaacatcctggcacggtttagtgtgccttgttt 21249597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 295 - 367
Target Start/End: Original strand, 24311546 - 24311619
Alignment:
Q  295 ttttaggattccttggtggtgt-gtttggcggttcctaaagatgttcctactttttaggagttaccatatttgt 367  Q
    ||||||||| |||||||| ||| ||||||| |||||||| |||||||||| |||||||||||| | ||||||||    
T  24311546 ttttaggatcccttggtgatgttgtttggcagttcctaatgatgttcctattttttaggagtttctatatttgt 24311619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 122 - 166
Target Start/End: Complemental strand, 15329130 - 15329086
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgcc 166  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||    
T  15329130 atgttggatacgatgttccaacatcctggcacggttctgtgtgcc 15329086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 122 - 166
Target Start/End: Original strand, 24789508 - 24789552
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgcc 166  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||    
T  24789508 atgttggatacgatgctccaacatcctggcacggttcagtgtgcc 24789552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 86 - 177
Target Start/End: Complemental strand, 25347991 - 25347897
Alignment:
Q  86 tattggcttcatttttgctaaaacaaatattcatg---tatgttggatacgatgttccaacatcttggcacggttcagtgtgccctgtttatgtg 177  Q
    ||||||| ||| |||||||||||||||||||||||    |||||||||| ||| ||||||||| | || ||| ||||||||||| | ||||||||    
T  25347991 tattggcctcacttttgctaaaacaaatattcatgcaagatgttggataagattttccaacatatgggtacgattcagtgtgccttatttatgtg 25347897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 169
Target Start/End: Original strand, 20475938 - 20475985
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgccctg 169  Q
    |||||||||||||||||||||||| ||||| |  ||||||||||||||    
T  20475938 atgttggatacgatgttccaacatgttggcgcaattcagtgtgccctg 20475985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 388 - 441
Target Start/End: Original strand, 24311918 - 24311972
Alignment:
Q  388 aatatatttctaaagaat-atttgtttcaatatatttctgaaaagaatatttgat 441  Q
    ||||||||||| |||||| ||||||||||| ||||||||||  ||||||||||||    
T  24311918 aatatatttctgaagaattatttgtttcaacatatttctgaggagaatatttgat 24311972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 85 - 121
Target Start/End: Complemental strand, 15329216 - 15329180
Alignment:
Q  85 gtattggcttcatttttgctaaaacaaatattcatgt 121  Q
    ||||||||| |||| ||||||||||||||||||||||    
T  15329216 gtattggctacattgttgctaaaacaaatattcatgt 15329180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 86 - 152
Target Start/End: Original strand, 18605928 - 18605998
Alignment:
Q  86 tattggcttcatttttgc-taaaacaaatattcatgt---atgttggatacgatgttccaacatcttggca 152  Q
    ||||||||||| |||||| ||||||||||||||||||   |||||| | ||||||| |||||||| |||||    
T  18605928 tattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcctggca 18605998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 226; Significance: 1e-124; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 81 - 441
Target Start/End: Complemental strand, 20559447 - 20559078
Alignment:
Q  81 ttgggtattggcttcatttttgctaaaacaaatattcatgtatgttggatacgatgttccaacatcttggcacggttcagtgtgccctgtttatgtggct 180  Q
    |||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||    
T  20559447 ttgggtataggcttcattgttgctaaaacaaatactcatgtatgttggatacgatgttctagtatcttggcacggttcagtgtgccctgtttatgtggct 20559348  T
Q  181 tggtttacgcaatatttatcttattaaagaaacctcgccctatttcttgttcaccaagcaacgcgtttttctccagaatcagctggaaaatttgtttcta 280  Q
    || ||| ||||||  |||||||||||| |||||| | |  |||||||||||||||||||| ||||||||| |||| |||||||||||| |||||||||||    
T  20559347 tgatttgcgcaatccttatcttattaaggaaaccacactatatttcttgttcaccaagcatcgcgtttttgtccaaaatcagctggaagatttgtttcta 20559248  T
Q  281 aaatataaacaatattttaggattccttggtggtgtgtttggcggttcctaaagatgttcctactttttaggagttaccatatttgtgaaatatattttc 380  Q
    ||||||||||||| |||||| |||||||| |||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||     
T  20559247 aaatataaacaatgttttagaattccttgttggtgtgtttggtggttcctaaagatgttcctgctttttatgagttaccatatttgtgaaatatatttta 20559148  T
Q  381 aaaagag---------aatatatttctaaagaatatttgtttcaatatatttctgaaaagaatatttgat 441  Q
    |||||||         ||||||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  20559147 aaaagagattttggaaaatatatttctgaagaatatttgtttcaatatatttctaaaaagaatatttgat 20559078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 92 - 388
Target Start/End: Complemental strand, 28624654 - 28624356
Alignment:
Q  92 cttcatttttgctaaaacaaatattcatgtatg---ttggatacgatgttccaacatcttggcacggttcagtgtgccctgtttatgtggcttggtttac 188  Q
    ||||||| ||||||||||||||| |||||||||   |||||||||| ||| ||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  28624654 cttcattgttgctaaaacaaatactcatgtatgatgttggatacgacgtttcaacatcttggcacggttcagtgtgtcctgtttatgttgcttggtttac 28624555  T
Q  189 gcaatatttatcttattaaagaaacctcgccctatttcttgttcaccaagcaacgcgtttttctccagaatcagctggaaaatttgtttctaaaatataa 288  Q
    ||||| ||||| ||||||| |||||| | ||||||||||||||||| ||| | ||   |||| |||||||||||||||   ||||||||||||||||||     
T  28624554 gcaatctttattttattaaggaaaccacaccctatttcttgttcacaaagtaccg-tattttgtccagaatcagctgggtgatttgtttctaaaatatag 28624456  T
Q  289 acaatattttaggattccttggtggtgtgtttggcggttcctaaagatgttcctactttttaggagttaccatatttgtgaaatatattttcaaaagaga 388  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  28624455 acaatattttaggattccttggtggtgtgtttggcggtttctaaagatgtttctactttttaggagttaccatatttgtgaaatatattttcaaaagaga 28624356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 185 - 441
Target Start/End: Original strand, 34648444 - 34648709
Alignment:
Q  185 ttacgcaatatttatcttattaaagaaacctcgccctatttcttgttcaccaagcaacgcgtttttctccagaatcagctggaaaatttgtttctaaaat 284  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||| |||||||||||||||    
T  34648444 ttacgcaatctttatcttattaaagaaacctcgccctatttcttgttcacaaagcagcgcgtttttgtccagaatcagctggaagatttgtttctaaaat 34648543  T
Q  285 ataaacaatattttaggattccttggtggtgtgtttggcggttcctaaagatgttcctactttttaggagttaccatatttgtgaaatatattttcaaaa 384  Q
    ||||| |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  34648544 ataaagaatattttgggattccttggtggtgtgtttggcgtttcctaaagatgttcctactttttagaagttaacatatttgtgaaatatattttcaaaa 34648643  T
Q  385 gag---------aatatatttctaaagaatatttgtttcaatatatttctgaaaagaatatttgat 441  Q
    |||         ||||||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  34648644 gagattttaaaaaatatatttctgaagaatatttgtttcaatatatttctaaaaagaatatttgat 34648709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 80 - 234
Target Start/End: Original strand, 28622913 - 28623070
Alignment:
Q  80 tttgggtattggcttcatttttgctaaaacaaatattcatgtatgttg---gatacgatgttccaacatcttggcacggttcagtgtgccctgtttatgt 176  Q
    |||| |||||| ||||||| ||||||||||||||| ||||||||| ||   ||||  |||||| ||||||||||||||||||||||||||||||||||||    
T  28622913 tttgagtattgacttcattgttgctaaaacaaatactcatgtatgatgctggatattatgttctaacatcttggcacggttcagtgtgccctgtttatgt 28623012  T
Q  177 ggcttggtttacgcaatatttatcttattaaagaaacctcgccctatttcttgttcac 234  Q
    ||||||||||| ||||| ||||| ||||||| |||||| |||||||||||||||||||    
T  28623013 ggcttggtttatgcaatctttattttattaaggaaaccacgccctatttcttgttcac 28623070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 80 - 189
Target Start/End: Original strand, 34639513 - 34639622
Alignment:
Q  80 tttgggtattggcttcatttttgctaaaacaaatattcatgtatgttggatacgatgttccaacatcttggcacggttcagtgtgccctgtttatgtggc 179  Q
    ||||| ||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  34639513 tttggatattggctttattgttgctaaaacaaatactcatgtatgttggatacgatgttccaacatcttggcacggttcagtgtgccttgtttatgtggc 34639612  T
Q  180 ttggtttacg 189  Q
    ||||||||||    
T  34639613 ttggtttacg 34639622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 122 - 367
Target Start/End: Original strand, 20764352 - 20764597
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgccctgtttatgtggcttggtttacgcaatatttatcttattaaagaaacctcgccct 221  Q
    ||||||||||  ||||| ||||||| ||||| ||||||||||||| || || ||||||||||||| | |    |||| ||| |||| |||||| |||| |    
T  20764352 atgttggatataatgtttcaacatcctggcaaggttcagtgtgccttggttttgtggcttggttttcacgcgctttaactttttaaggaaaccacgcctt 20764451  T
Q  222 atttcttgttcaccaagcaacgcgtttttctccagaatcagctggaaaatttgtttctaaaatataaacaatattttaggattccttggtggtgtgtttg 321  Q
    || |||||||||||||| | ||  ||||| ||||||||   ||||   ||||||||||||| ||||||  ||||||||||||||||||||| ||| ||||    
T  20764452 atctcttgttcaccaagtatcgtatttttgtccagaatattctgggtgatttgtttctaaagtataaattatattttaggattccttggtgctgtttttg 20764551  T
Q  322 gcggttcctaaagatgttcctactttttaggagttaccatatttgt 367  Q
    | ||||||||||||||||||||||| |||||| || | ||||||||    
T  20764552 gtggttcctaaagatgttcctacttcttaggaattgctatatttgt 20764597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 85 - 356
Target Start/End: Original strand, 21316902 - 21317178
Alignment:
Q  85 gtattggcttcatttttgctaaaacaaatattcatgtatg---ttggatacgatgttccaacatcttggcacggttcagtgtgccctgtttatgtggctt 181  Q
    |||||||||||||| |||||||||||||||||| ||||||   ||||||| |||||||||||||| |||||  |||||||||||||||||| ||||| ||    
T  21316902 gtattggcttcattattgctaaaacaaatattcttgtatgatgttggatatgatgttccaacatcctggcatagttcagtgtgccctgtttgtgtggatt 21317001  T
Q  182 ggtttacgcaatatttatcttattaaagaaacctcgccctatt-tcttgttcaccaagcaacgcgtttttctccagaatcagctggaaaatttgtttcta 280  Q
    | ||| || ||  |||||||  || | |||||| |||| | || |||||||||||||| |||   ||||  |||| |||||||| | | ||||||| |||    
T  21317002 gtttttcggaagctttatctatttcaggaaaccacgcctttttctcttgttcaccaagtaacatattttcgtccataatcagctaggagatttgttccta 21317101  T
Q  281 aaatataaacaatattttaggattccttggtggtgtgtttggcg--gttcctaaagatgttcctactttttaggagtt 356  Q
    || |||| |||||||||||||| |  |||||||||| ||||| |  |||| |||| |||||||||||||||| |||||    
T  21317102 aagtatagacaatattttaggaatttttggtggtgt-tttggtgtagttcataaaaatgttcctactttttatgagtt 21317178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 275 - 367
Target Start/End: Original strand, 28623082 - 28623174
Alignment:
Q  275 tttctaaaatataaacaatattttaggattccttggtggtgtgtttggcggttcctaaagatgttcctactttttaggagttaccatatttgt 367  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||||||||||||| || |||||||| || |||| |||||    
T  28623082 tttctaaaatatagacaatattttaggattccttggtggtgcgtttggtggttcctaaagatgttccgacattttaggactttccatctttgt 28623174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 86 - 177
Target Start/End: Original strand, 18152069 - 18152163
Alignment:
Q  86 tattggcttcatttttgctaaaacaaatattcatgtatg---ttggatacgatgttccaacatcttggcacggttcagtgtgccctgtttatgtg 177  Q
    |||||||||| || || |||||| ||||||||||| |||   ||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  18152069 tattggcttccttatttctaaaataaatattcatgcatgatgttggatacgatgttctaacatgttggcacggttcagtgtgccctgtttatgtg 18152163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 122 - 166
Target Start/End: Complemental strand, 19077953 - 19077909
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgcc 166  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  19077953 atgttggatacgatgttccaacatcttggcacggttcagtgtgcc 19077909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 394 - 442
Target Start/End: Complemental strand, 20558986 - 20558938
Alignment:
Q  394 tttctaaagaatatttgtttcaatatatttctgaaaagaatatttgata 442  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  20558986 tttctaaagaatatttgtttaaatatatttctgaaaagaatatttgata 20558938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 394 - 442
Target Start/End: Complemental strand, 28624228 - 28624180
Alignment:
Q  394 tttctaaagaatatttgtttcaatatatttctgaaaagaatatttgata 442  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  28624228 tttctgaagaatatttgtttcaatatatttctgaaaagaatatttgata 28624180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 394 - 442
Target Start/End: Original strand, 34656618 - 34656666
Alignment:
Q  394 tttctaaagaatatttgtttcaatatatttctgaaaagaatatttgata 442  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  34656618 tttctaaagaatatttgtttcaatatatttctgaaaagaacatttgata 34656666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 88 - 165
Target Start/End: Original strand, 16308682 - 16308763
Alignment:
Q  88 ttggcttcatttttgctaaaacaaatattcatgt---atgttggatacgatgttcc-aacatcttggcacggttcagtgtgc 165  Q
    ||||||||| ||||||||||||||||||||||||   ||||||||||||||||||| |||||| | |||| |||||||||||    
T  16308682 ttggcttcacttttgctaaaacaaatattcatgtgtgatgttggatacgatgttccaaacatcctagcacagttcagtgtgc 16308763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 80 - 166
Target Start/End: Complemental strand, 24542509 - 24542420
Alignment:
Q  80 tttgggtattggcttcatttttgctaaaacaaatattcatgtatg---ttggatacgatgttccaacatcttggcacggttcagtgtgcc 166  Q
    |||| |||||| ||||||| ||||||||||||||| |||||||||   |||||||||||||||||||||  |||||||||| ||| ||||    
T  24542509 tttgagtattgacttcattgttgctaaaacaaatactcatgtatgatgttggatacgatgttccaacattctggcacggtttagtatgcc 24542420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 122 - 166
Target Start/End: Original strand, 12385207 - 12385251
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgcc 166  Q
    ||||||||||||||||||||||||| |||||||||||||||||||    
T  12385207 atgttggatacgatgttccaacatcctggcacggttcagtgtgcc 12385251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 122 - 166
Target Start/End: Complemental strand, 13196134 - 13196090
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgcc 166  Q
    ||||||||||||||||||||||||| |||||||||||||||||||    
T  13196134 atgttggatacgatgttccaacatcctggcacggttcagtgtgcc 13196090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 122 - 166
Target Start/End: Original strand, 19894017 - 19894061
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgcc 166  Q
    ||||||||||||||| |||||||||||||||||||||||||||||    
T  19894017 atgttggatacgatgctccaacatcttggcacggttcagtgtgcc 19894061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 125 - 172
Target Start/End: Original strand, 15930200 - 15930247
Alignment:
Q  125 ttggatacgatgttccaacatcttggcacggttcagtgtgccctgttt 172  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||    
T  15930200 ttggatacgatgttccaacatcctggcacggttcagtgtgccttgttt 15930247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 122 - 172
Target Start/End: Complemental strand, 19598491 - 19598441
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgccctgttt 172  Q
    ||||||||||||||||||||||||| || |||||||||||||||| |||||    
T  19598491 atgttggatacgatgttccaacatcctgacacggttcagtgtgccttgttt 19598441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 122 - 172
Target Start/End: Original strand, 23882047 - 23882097
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgccctgttt 172  Q
    ||||||||||||||||||||||||| || |||||||||||||||| |||||    
T  23882047 atgttggatacgatgttccaacatcctgacacggttcagtgtgccttgttt 23882097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 122 - 164
Target Start/End: Complemental strand, 25806218 - 25806176
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtg 164  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  25806218 atgttggatacgatgttccaacatcctggcacggttcagtgtg 25806176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 325 - 365
Target Start/End: Original strand, 16308924 - 16308964
Alignment:
Q  325 gttcctaaagatgttcctactttttaggagttaccatattt 365  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  16308924 gttcctaaagatgttcctactttttaggagtttccatattt 16308964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 122 - 166
Target Start/End: Complemental strand, 17235404 - 17235360
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgcc 166  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||    
T  17235404 atgttggatacgatgctccaacatcctggcacggttcagtgtgcc 17235360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 122 - 166
Target Start/End: Complemental strand, 23879695 - 23879651
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgcc 166  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||    
T  23879695 atgttggatacgatgctccaacatcctggcacggttcagtgtgcc 23879651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 122 - 166
Target Start/End: Complemental strand, 25970487 - 25970443
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgcc 166  Q
    |||||||||| |||| |||||||||||||||||||||||||||||    
T  25970487 atgttggatatgatgctccaacatcttggcacggttcagtgtgcc 25970443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 122 - 166
Target Start/End: Complemental strand, 25974927 - 25974883
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgcc 166  Q
    |||||||||| |||| |||||||||||||||||||||||||||||    
T  25974927 atgttggatatgatgctccaacatcttggcacggttcagtgtgcc 25974883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 122 - 164
Target Start/End: Complemental strand, 11961279 - 11961237
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtg 164  Q
    ||||||||||||||||||||||||| |||||||||| ||||||    
T  11961279 atgttggatacgatgttccaacatcctggcacggtttagtgtg 11961237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 122 - 164
Target Start/End: Original strand, 12039059 - 12039101
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtg 164  Q
    ||||||||| | |||||||||||||||||||||||||||||||    
T  12039059 atgttggatgcaatgttccaacatcttggcacggttcagtgtg 12039101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 123 - 208
Target Start/End: Complemental strand, 30425691 - 30425606
Alignment:
Q  123 tgttggatacgatgttccaacatcttggcacggttcagtgtgccctgtttatgtggcttggtttacgcaatatttatcttattaaa 208  Q
    ||||||||| ||||||||||||||||||||| ||||| |||| | ||||  |||| |||||||| |||    ||||||||||||||    
T  30425691 tgttggatatgatgttccaacatcttggcacagttcaatgtgtcatgttcttgtgccttggtttgcgcgcgctttatcttattaaa 30425606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 122 - 166
Target Start/End: Original strand, 8465016 - 8465060
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgcc 166  Q
    ||||||||||| ||||||||||||| |||||||||| ||||||||    
T  8465016 atgttggatacaatgttccaacatcctggcacggtttagtgtgcc 8465060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 122 - 166
Target Start/End: Original strand, 21722757 - 21722801
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgcc 166  Q
    ||||||||||| ||||||||||||| ||||| |||||||||||||    
T  21722757 atgttggatacaatgttccaacatcctggcatggttcagtgtgcc 21722801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 122 - 166
Target Start/End: Complemental strand, 33666601 - 33666557
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgcc 166  Q
    |||||||||| |||| ||||||||| |||||||||||||||||||    
T  33666601 atgttggatatgatgctccaacatcctggcacggttcagtgtgcc 33666557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 166
Target Start/End: Original strand, 17868275 - 17868318
Alignment:
Q  123 tgttggatacgatgttccaacatcttggcacggttcagtgtgcc 166  Q
    |||||||||| ||||||||||||| || ||||||||||||||||    
T  17868275 tgttggatacaatgttccaacatcgtgacacggttcagtgtgcc 17868318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 166
Target Start/End: Original strand, 17878058 - 17878101
Alignment:
Q  123 tgttggatacgatgttccaacatcttggcacggttcagtgtgcc 166  Q
    |||||||||| ||||||||||||| || ||||||||||||||||    
T  17878058 tgttggatacaatgttccaacatcgtgacacggttcagtgtgcc 17878101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 85 - 145
Target Start/End: Original strand, 26964817 - 26964881
Alignment:
Q  85 gtattggcttcatttttgctaaaacaaatattcatgt----atgttggatacgatgttccaacat 145  Q
    ||||||||| |||| |||||||||||||||| |||||    ||||||||||| ||||||||||||    
T  26964817 gtattggctgcattgttgctaaaacaaatatccatgtgttgatgttggatactatgttccaacat 26964881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 166
Target Start/End: Original strand, 29253039 - 29253074
Alignment:
Q  131 acgatgttccaacatcttggcacggttcagtgtgcc 166  Q
    |||||||||||||||| |||||||||||||||||||    
T  29253039 acgatgttccaacatcctggcacggttcagtgtgcc 29253074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 325 - 367
Target Start/End: Complemental strand, 21727747 - 21727705
Alignment:
Q  325 gttcctaaagatgttcctactttttaggagttaccatatttgt 367  Q
    |||||||||||||||| ||||||||||||||| | ||||||||    
T  21727747 gttcctaaagatgttcttactttttaggagtttcaatatttgt 21727705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 122 - 172
Target Start/End: Original strand, 26964902 - 26964952
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgccctgttt 172  Q
    |||||||||| |||||||||||||  || |||||||||||||||| |||||    
T  26964902 atgttggatatgatgttccaacattctgacacggttcagtgtgccttgttt 26964952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 367
Target Start/End: Complemental strand, 19658528 - 19658479
Alignment:
Q  318 tttggcggttcctaaagatgttcctactttttaggagttaccatatttgt 367  Q
    ||||||||||||||||||||||| ||| ||||||||  | ||||||||||    
T  19658528 tttggcggttcctaaagatgttcatacattttaggaccttccatatttgt 19658479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 122 - 166
Target Start/End: Original strand, 9281059 - 9281103
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgcc 166  Q
    |||||||||| |||| ||||||||| ||||||| |||||||||||    
T  9281059 atgttggatatgatgctccaacatcctggcacgattcagtgtgcc 9281103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 122 - 166
Target Start/End: Complemental strand, 19658729 - 19658685
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgcc 166  Q
    |||||||||| |||||||||||||| | ||||| |||||||||||    
T  19658729 atgttggatatgatgttccaacatcctagcacgattcagtgtgcc 19658685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 122 - 166
Target Start/End: Original strand, 21705879 - 21705923
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgcc 166  Q
    ||||||||||| ||||||||| ||||||||| | |||||||||||    
T  21705879 atgttggatacaatgttccaatatcttggcatgcttcagtgtgcc 21705923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 204; Significance: 1e-111; HSPs: 2)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 179 - 442
Target Start/End: Original strand, 9937 - 10200
Alignment:
Q  179 cttggtttacgcaatatttatcttattaaagaaacctcgccctatttcttgttcaccaagcaacgcgtttttctccagaatcagctggaaaatttgtttc 278  Q
    |||| |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| |||  |||| ||||||||||||||||| |||||||||    
T  9937 cttgatttacgcaatctttatcttattaaagaaatctcgccctatttcttgttcaccaagcagcgcacttttgtccagaatcagctggaagatttgtttc 10036  T
Q  279 taaaatataaacaatattttaggattccttggtggtgtgtttggcggttcctaaagatgttcctactttttaggagttaccatatttgtgaaatatattt 378  Q
     ||||||||||||||| ||| |||||| ||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  10037 aaaaatataaacaatacttttggattctttgatggtgtgtttggcggttcctaaagatgttcctactctttaggagttaccatatttgtgaaatatattt 10136  T
Q  379 tcaaaagagaatatatttctaaagaatatttgtttcaatatatttctgaaaagaatatttgata 442  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10137 tcaaaggagaatatatttctaaagaatatttgtttcaatatatttctgaaaagaatatttgata 10200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 388 - 442
Target Start/End: Original strand, 10239 - 10293
Alignment:
Q  388 aatatatttctaaagaatatttgtttcaatatatttctgaaaagaatatttgata 442  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  10239 aatatatttctaaagaatatttgtttcaatatatttatgaaaagaatatttgata 10293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 201; Significance: 1e-109; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 80 - 441
Target Start/End: Complemental strand, 41469 - 41092
Alignment:
Q  80 tttgggtattggcttcatttttgctaaaacaaatattcatgtatg---ttggatacgatgttccaacatcttggcacggttcagtgtgccctgtttatgt 176  Q
    |||| ||||| ||||| || ||||||||||||||  ||||||||    ||||||||||||||||||||||||||||| | |||||||| | |||||||||    
T  41469 tttgagtatttgcttctttgttgctaaaacaaatgctcatgtataatattggatacgatgttccaacatcttggcacagctcagtgtgtcatgtttatgt 41370  T
Q  177 ggcttggtttacgcaatattt--atcttattaaagaaacctcgccctatttcttgttcaccaagcaacgcgtttttctccagaatcagctggaaaatttg 274  Q
    ||||||||||||||||| |||  |||||||||| |||| | ||||||||||||||||||||||||||||||||||| || |||||||||||||| |||||    
T  41369 ggcttggtttacgcaatctttttatcttattaaggaaagcacgccctatttcttgttcaccaagcaacgcgtttttgtctagaatcagctggaatatttg 41270  T
Q  275 tttctaaaatataaacaatattttaggattccttggtggtgtgtttggcggttcctaaagatgttcctactttttaggagttaccatatttgtgaaatat 374  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||| | |||| |||| ||||||||||||||||||||||||||||||||| ||||||    
T  41269 tttctaaaatatgaacaatattttaggatttcttggtggtgtgtttgacagttcttaaaaatgttcctactttttaggagttaccatatttgtaaaatat 41170  T
Q  375 attttcaaaagag---------aatata-tttctaaagaatatttgtttcaatatatttctg-aaaagaatatttgat 441  Q
    |||||||||||||         |||||| ||||||||||||||||||||||||||||||| | |||||||||||||||    
T  41169 attttcaaaagagattttggaaaatatagtttctaaagaatatttgtttcaatatatttcagaaaaagaatatttgat 41092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 80 - 249
Target Start/End: Complemental strand, 36412 - 36237
Alignment:
Q  80 tttgggtattggcttcatttttgctaaaacaaata---ttcatgtatgttg---gatacgatgttccaacatcttggcacggttcagtgtgccctgttta 173  Q
    |||| |||||| ||||||| ||||||||| |||||   |||||||||| ||   || ||||||||||||||||||||||||||| || ||||||||||||    
T  36412 tttgagtattgacttcattgttgctaaaaaaaataatattcatgtatgatgtttgacacgatgttccaacatcttggcacggttgagcgtgccctgttta 36313  T
Q  174 tgtggcttggtttacgcaatatttatcttattaaagaaacctcgccctatttcttgttcaccaagcaacgcgtttt 249  Q
    ||||| |||||||||||||| ||||||||||||| ||||||  | |||||||||||||||| ||||||||| ||||    
T  36312 tgtggtttggtttacgcaatctttatcttattaaggaaaccatggcctatttcttgttcacgaagcaacgcatttt 36237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 196; Significance: 1e-106; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 80 - 433
Target Start/End: Original strand, 22183622 - 22183987
Alignment:
Q  80 tttgggtattggcttcatttttgctaaaacaaatattcatgtatg---ttggatacgatgttccaacatcttggcacggttcagtgtgccctgtttatgt 176  Q
    |||| |||||||||||||| |  |||||||||||| |||||||||   |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  22183622 tttgagtattggcttcattgtcactaaaacaaatactcatgtatgatgttggatacgatgttccaatatcttggcacggttcagtgtgccctgtttatgt 22183721  T
Q  177 ggcttggtttacgcaatatttatcttattaaagaaacctcgccctatttcttgttcaccaagcaacgcgtttttctccagaatcagctggaaaatttgtt 276  Q
    | ||||||||||||||| ||||||||||||| |||||| |||  |||||||| ||||||||| | ||  ||||| |||| ||||| ||     |||||||    
T  22183722 gacttggtttacgcaatctttatcttattaaggaaaccacgcgttatttctttttcaccaagtaccgtatttttgtccataatcaactacgtgatttgtt 22183821  T
Q  277 tctaaaatataaacaatattttaggattccttggtggtgtgtttggcggttcctaaagatgttcctactttttaggagttaccatatttgtgaaatatat 376  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||    
T  22183822 tctaaaatatagacaatatgttaggattccttggtggtgtgtttggcggttactaaagatgttcctactttttaggagttgccatatttatgaaatatat 22183921  T
Q  377 tttcaaaagag---------aatatatttctaaagaatatttgtttcaatatatttctgaaaagaa 433  Q
    |||||||||||         ||||||||||| ||||||||||||||||||||||||||||||||||    
T  22183922 tttcaaaagagattttggaaaatatatttctgaagaatatttgtttcaatatatttctgaaaagaa 22183987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 80 - 356
Target Start/End: Complemental strand, 24118396 - 24118117
Alignment:
Q  80 tttgggtattggcttcatttttgctaaaacaaatattcatgtatg---ttggatacgatgttccaacatcttggcacggttcagtgtgccctgtttatgt 176  Q
    |||| ||||||| |||||| ||| ||||||||||||| |||||||   ||||||| | |||||||||||||||||||||||||||||| |||||||||||    
T  24118396 tttgtgtattggtttcattattgataaaacaaatatttatgtatgatgttggatatgctgttccaacatcttggcacggttcagtgtgtcctgtttatgt 24118297  T
Q  177 ggcttggtttacgcaatatttatcttattaaagaaacctcgccctatttcttgttcaccaagcaacg-cgtttttctccagaatcagctggaaaatttgt 275  Q
    | ||||||||| |     |||||||||||||  ||| | | || |||||||||||   ||||    |   ||||| |||||||||||||||   ||||||    
T  24118296 gccttggtttatgtgcgctttatcttattaagaaaatcacaccttatttcttgttggtcaagttgtgtactttttgtccagaatcagctgggtgatttgt 24118197  T
Q  276 ttctaaaatataaacaatattttaggattccttggtggtgtgtttggcggttcctaaagatgttcctactttttaggagtt 356  Q
    | ||||| |||| | |||||||||| | || |||||||||| |||||  |||| |||||||||||||||||||||| ||||    
T  24118196 tcctaaagtatagaaaatattttagaaatctttggtggtgt-tttggtagttcttaaagatgttcctactttttagaagtt 24118117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 216 - 356
Target Start/End: Complemental strand, 9523529 - 9523388
Alignment:
Q  216 cgccctatttcttgttcaccaagcaacgcgtttttctccagaatcagctggaaaatttgtttctaaaatataaacaatattttaggattccttggtggtg 315  Q
    |||| |||||||||||||||||| ||||  ||||| ||||||||||||| |   ||||||| ||||| |||| ||||||||||||||| |||| ||||||    
T  9523529 cgccttatttcttgttcaccaagtaacgtatttttatccagaatcagctcggtgatttgttcctaaagtatagacaatattttaggatcccttagtggtg 9523430  T
Q  316 -tgtttggcggttcctaaagatgttcctactttttaggagtt 356  Q
     |||||||||||||||||| |||||| |||||||||| ||||    
T  9523429 ttgtttggcggttcctaaaaatgttcatactttttagaagtt 9523388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 86 - 177
Target Start/End: Original strand, 17660774 - 17660868
Alignment:
Q  86 tattggcttcatttttgctaaaacaaatattcatgtatg---ttggatacgatgttccaacatcttggcacggttcagtgtgccctgtttatgtg 177  Q
    ||||||||||||| ||||||||||||||||||||| |||   ||||||||||||||||||||| ||||||| ||||| ||| ||||||| |||||    
T  17660774 tattggcttcattattgctaaaacaaatattcatgcatgatgttggatacgatgttccaacatgttggcacagttcaatgttccctgttaatgtg 17660868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 361 - 442
Target Start/End: Complemental strand, 9523263 - 9523173
Alignment:
Q  361 tatttgtgaaatatattttcaaaagaga---------atatatttctaaagaatatttgtttcaatatatttctgaaaagaatatttgata 442  Q
    ||||||||||||||||||||||||||||         |||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  9523263 tatttgtgaaatatattttcaaaagagattttgaaatatatatttctgaagaatatatgtttcaatatatttctgaaaagaatatttgata 9523173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 88 - 168
Target Start/End: Complemental strand, 20127786 - 20127703
Alignment:
Q  88 ttggcttcatttttgctaaaacaaatattcatgta---tgttggatacgatgttccaacatcttggcacggttcagtgtgccct 168  Q
    ||||| ||| |||||||||||||||||||||| ||   ||||||||||||||||||||||||| || |||||||||||||||||    
T  20127786 ttggcctcacttttgctaaaacaaatattcatttaagatgttggatacgatgttccaacatctgggtacggttcagtgtgccct 20127703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 92 - 169
Target Start/End: Original strand, 20740299 - 20740379
Alignment:
Q  92 cttcatttttgctaaaacaaatattcatgt---atgttggatacgatgttccaacatcttggcacggttcagtgtgccctg 169  Q
    ||||||||||||||||||||||||||||||   ||||||||||| ||||||||||||| | |||| ||||||||| |||||    
T  20740299 cttcatttttgctaaaacaaatattcatgtgtgatgttggatacaatgttccaacatcctagcacagttcagtgtaccctg 20740379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 394 - 441
Target Start/End: Original strand, 22184057 - 22184104
Alignment:
Q  394 tttctaaagaatatttgtttcaatatatttctgaaaagaatatttgat 441  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  22184057 tttctgaagaatatttgtttcaatatatttctgaaaagaatatttgat 22184104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 122 - 166
Target Start/End: Complemental strand, 23624651 - 23624607
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgcc 166  Q
    ||||||||||||||||||||||||| |||||||||||||||||||    
T  23624651 atgttggatacgatgttccaacatcctggcacggttcagtgtgcc 23624607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 122 - 166
Target Start/End: Original strand, 30605040 - 30605084
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgcc 166  Q
    ||||||||||||||||||||||||| |||||||||||||||||||    
T  30605040 atgttggatacgatgttccaacatcctggcacggttcagtgtgcc 30605084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 122 - 165
Target Start/End: Original strand, 22082040 - 22082083
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgc 165  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  22082040 atgttggatacgatgttccaacatcctggcacggttcagtgtgc 22082083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 325 - 367
Target Start/End: Original strand, 20740543 - 20740585
Alignment:
Q  325 gttcctaaagatgttcctactttttaggagttaccatatttgt 367  Q
    |||||||||||||||||||||||||||||||| ||||||||||    
T  20740543 gttcctaaagatgttcctactttttaggagtttccatatttgt 20740585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 122 - 166
Target Start/End: Original strand, 22251390 - 22251434
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgcc 166  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||    
T  22251390 atgttggatacgatgctccaacatcctggcacggttcagtgtgcc 22251434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 122 - 170
Target Start/End: Complemental strand, 38406171 - 38406123
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgccctgt 170  Q
    |||||||||||||||||||| |||| | |||||||||||||||||||||    
T  38406171 atgttggatacgatgttccagcatcctagcacggttcagtgtgccctgt 38406123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 325 - 367
Target Start/End: Original strand, 22130414 - 22130456
Alignment:
Q  325 gttcctaaagatgttcctactttttaggagttaccatatttgt 367  Q
    |||||||||||||||| ||||||||||||||| ||||||||||    
T  22130414 gttcctaaagatgttcatactttttaggagtttccatatttgt 22130456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 122 - 164
Target Start/End: Original strand, 23757606 - 23757648
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtg 164  Q
    ||||||||||||||||||||||||| ||||||| |||||||||    
T  23757606 atgttggatacgatgttccaacatcctggcacgattcagtgtg 23757648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 122 - 164
Target Start/End: Original strand, 23823062 - 23823104
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtg 164  Q
    ||||||||||||||||||||||||| ||||||| |||||||||    
T  23823062 atgttggatacgatgttccaacatcctggcacgattcagtgtg 23823104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 86 - 161
Target Start/End: Original strand, 17920120 - 17920199
Alignment:
Q  86 tattggcttcatttttgc-taaaacaaatattcatgt---atgttggatacgatgttccaacatcttggcacggttcagt 161  Q
    ||||||||||| |||||| ||||||||||||||||||   |||||| | ||||||| |||||||| ||||| ||||||||    
T  17920120 tattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcctggcatggttcagt 17920199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 86 - 161
Target Start/End: Original strand, 34404765 - 34404844
Alignment:
Q  86 tattggcttcatttttgc-taaaacaaatattcatgt---atgttggatacgatgttccaacatcttggcacggttcagt 161  Q
    ||||||||||| |||||| ||||||||||||||||||   |||||| | ||||||| |||||||| ||||| ||||||||    
T  34404765 tattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcctggcatggttcagt 34404844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 122 - 166
Target Start/End: Complemental strand, 18221920 - 18221876
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgcc 166  Q
    |||||||||| |||||||||||||||||| | |||||||||||||    
T  18221920 atgttggatatgatgttccaacatcttggaatggttcagtgtgcc 18221876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 216 - 296
Target Start/End: Complemental strand, 25668434 - 25668354
Alignment:
Q  216 cgccctatttcttgttcaccaagcaacgcgtttttctccagaatcagctggaaaatttgtttctaaaatataaacaatatt 296  Q
    |||| |||||||||||   ||| |||||||||||| |||| ||||| |||| | |||||||||||||||||| | ||||||    
T  25668434 cgccttatttcttgtttgtcaaacaacgcgtttttgtccataatcaactgggagatttgtttctaaaatatagaaaatatt 25668354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 122 - 166
Target Start/End: Complemental strand, 26037587 - 26037543
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgcc 166  Q
    |||| |||||||||||||||||||| ||||| |||||||||||||    
T  26037587 atgtcggatacgatgttccaacatcctggcatggttcagtgtgcc 26037543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 165
Target Start/End: Complemental strand, 24190673 - 24190630
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgc 165  Q
    ||||||||||||||| ||||||||  ||||||||||||||||||    
T  24190673 atgttggatacgatgctccaacattctggcacggttcagtgtgc 24190630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 162
Target Start/End: Original strand, 9421868 - 9421905
Alignment:
Q  125 ttggatacgatgttccaacatcttggcacggttcagtg 162  Q
    |||||||||||||||||||||| | |||||||||||||    
T  9421868 ttggatacgatgttccaacatcctagcacggttcagtg 9421905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 367
Target Start/End: Complemental strand, 18221714 - 18221673
Alignment:
Q  326 ttcctaaagatgttcctactttttaggagttaccatatttgt 367  Q
    ||||||||||||||||||| |||||||| || ||||||||||    
T  18221714 ttcctaaagatgttcctacattttaggactttccatatttgt 18221673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 122 - 166
Target Start/End: Original strand, 20714092 - 20714136
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgcc 166  Q
    ||||| ||||||||||||||||||| ||| |||||| ||||||||    
T  20714092 atgttagatacgatgttccaacatcctggaacggtttagtgtgcc 20714136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 122 - 174
Target Start/End: Complemental strand, 25674516 - 25674464
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgccctgtttat 174  Q
    ||||||||||  |||||||||||| ||| || ||||||||||||| |||||||    
T  25674516 atgttggatataatgttccaacattttgacatggttcagtgtgccttgtttat 25674464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 148; Significance: 6e-78; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 93 - 367
Target Start/End: Original strand, 26193657 - 26193934
Alignment:
Q  93 ttcatttttgctaaaacaaatattcatgtatg---ttggatacgatgttccaacatcttggcacggttcagtgtgccctgtttatgtggcttggtttacg 189  Q
    |||||| ||||||||||||||| |||||||||   |||||||||||||||||||||||||||| |||| || |||| |||||||||||||||||||||||    
T  26193657 ttcattgttgctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggcatggtttagcgtgctctgtttatgtggcttggtttacg 26193756  T
Q  190 caatatttatcttattaaagaaacctcgccctatttcttgttcaccaagcaacgcgtttttctccagaatcagctggaaaatttgtttctaaaatataaa 289  Q
    |||  |||||||||||||||||||| |||| |||||||| ||||||||| |||   ||||| |||||||||| || |   |||||||||||||| ||| |    
T  26193757 caagttttatcttattaaagaaaccacgccttatttcttattcaccaagtaacatatttttgtccagaatcaactaggtgatttgtttctaaaacataga 26193856  T
Q  290 caatattttaggattccttggtggtgtgtttggcggttcctaaagatgttcctactttttaggagttaccatatttgt 367  Q
    |||||||||| ||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||| | ||||||||    
T  26193857 caatattttacgattccttgatggtgtttttggcggttcctaaagatgttcttactttttaggagttgctatatttgt 26193934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 85 - 367
Target Start/End: Complemental strand, 24814943 - 24814657
Alignment:
Q  85 gtattggcttcatttttgctaaaacaaatattcatgtatg---ttggatacgatgttccaacatcttggcacggttcagtgtgccctgtttatgtggctt 181  Q
    |||||||||||||| ||||||||||||||| |||||||||   |||||||||||| | ||||||||||||||| ||||||||||||||||| ||||||||    
T  24814943 gtattggcttcattgttgctaaaacaaatactcatgtatgatgttggatacgatgcttcaacatcttggcacgattcagtgtgccctgtttgtgtggctt 24814844  T
Q  182 ggtttacgcaatatttatcttattaaagaaacctcgccctatttcttgttcaccaagcaacgcgtttttctccagaatcagctggaaaatttgtttctaa 281  Q
     |||| ||  |  |||||||| |||| |||||| |||| |||||||||||||||||| |||   ||||| |||||||||| || ||  ||||||| ||||    
T  24814843 agttttcgtgaactttatctttttaaggaaaccacgccttatttcttgttcaccaagtaacatatttttgtccagaatcaactagatgatttgttcctaa 24814744  T
Q  282 aatataaacaatattttaggattccttggtggtg-tgtttggcggttcctaaagatgttcctactttttaggagttaccatatttgt 367  Q
    | |||| ||||||||||| |||||||| ||| || ||||| |||||||| |||||| ||||||||||||||||||| | ||||||||    
T  24814743 agtatagacaatattttatgattccttagtgatgttgttttgcggttccaaaagatattcctactttttaggagttgctatatttgt 24814657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 88 - 366
Target Start/End: Complemental strand, 19295598 - 19295316
Alignment:
Q  88 ttggcttcatttttgctaaaacaaatattcatgtatg---ttggatacgatgttccaacatcttggcacggttcagtgtgccctgtttatgtggctt--- 181  Q
    ||||||||||| ||||||||||||||| |||||||||   |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||       
T  19295598 ttggcttcattattgctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggcacggttcagtgtgtcctgtttatgt-gcttaac 19295500  T
Q  182 ggtttacgcaatatttatcttattaaagaaacctcgccctatttcttgttcaccaagcaacgcgtttttctccagaatcagctggaaaatttgtttctaa 281  Q
     ||  ||||| | |||||||| |||| |||  |  ||| ||||| |||||  |||||  || ||||||| |||| ||||| |||| | |||| || ||||    
T  19295499 tgtacacgcact-tttatctttttaaggaattcatgccttattttttgttggccaagtgacacgtttttgtccataatcaactgggagattttttcctaa 19295401  T
Q  282 aatataaacaatattttaggattccttggtggtgtgtttggcggttcctaaagatgttcctactttttaggagttaccatatttg 366  Q
    | |||| |||||||||||||| |  ||||| ||||||||||| |||||||||||||||||||||||||||||||| | |||||||    
T  19295400 agtatagacaatattttaggaatatttggttgtgtgtttggcagttcctaaagatgttcctactttttaggagttgctatatttg 19295316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 131 - 367
Target Start/End: Complemental strand, 15709162 - 15708924
Alignment:
Q  131 acgatgttccaacatcttggcacggttcagtgtgccctgtttatgtggcttggtttacgcaatatttatcttattaaagaaacctcgccctatttcttgt 230  Q
    |||||||||||||||| ||||||||||||||||||||||||| | ||||||||||  | | |  |||||||| |||| |||||  |||| ||||||||||    
T  15709162 acgatgttccaacatcctggcacggttcagtgtgccctgtttgtatggcttggttatctcgagttttatctttttaaggaaactacgccttatttcttgt 15709063  T
Q  231 tcaccaagcaa-cgcgtttttctccagaatcagctggaaaatttgtttctaaaatataaacaatattttaggattccttggtggtg-tgtttggcggttc 328  Q
    |||||||| || |   ||||| |||||||||||||||   ||||||| ||||| |||| |||| |||||||||||||||||| ||| | ||||| |||||    
T  15709062 tcaccaagtaaacatatttttgtccagaatcagctgggttatttgttcctaaattatagacaagattttaggattccttggtagtgttctttggaggttc 15708963  T
Q  329 ctaaagatgttcctactttttaggagttaccatatttgt 367  Q
    |||||||||||||| ||||||||||||| | ||||||||    
T  15708962 ctaaagatgttcctgctttttaggagttgctatatttgt 15708924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 204 - 352
Target Start/End: Original strand, 23174172 - 23174321
Alignment:
Q  204 ttaaagaaacctcgccctatttcttgttcaccaagcaacgcgtttttctccagaatcagctggaaaatttgtttctaaaatataaacaatattttaggat 303  Q
    |||| |||||| | || |||||||||||||||||| |||   ||||| ||||| ||||| ||||  ||||||| ||||| |||| |||||||||||||||    
T  23174172 ttaaggaaaccacaccttatttcttgttcaccaagtaacatatttttgtccaggatcagttggatgatttgttcctaaagtatagacaatattttaggat 23174271  T
Q  304 tccttggtggtg-tgtttggcggttcctaaagatgttcctactttttagg 352  Q
    ||||||||| || |||||||||||||||||| ||||||||||||||||||    
T  23174272 tccttggtgatgttgtttggcggttcctaaatatgttcctactttttagg 23174321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 86 - 190
Target Start/End: Complemental strand, 19353964 - 19353857
Alignment:
Q  86 tattggcttcatttttgctaaaacaaatattcatgtatg---ttggatacgatgttccaacatcttggcacggttcagtgtgccctgtttatgtggcttg 182  Q
    |||||||||||||  |||||||||||||||||||| |||   ||||||||||||||||||||| |||||||||||||||||||||| |||||||| | ||    
T  19353964 tattggcttcattactgctaaaacaaatattcatgcatgatattggatacgatgttccaacatgttggcacggttcagtgtgccctttttatgtgccatg 19353865  T
Q  183 gtttacgc 190  Q
     |||||||    
T  19353864 atttacgc 19353857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 122 - 339
Target Start/End: Complemental strand, 23297296 - 23297079
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgccctgtttatgtggcttggtttacgcaatatttatcttattaaagaaacctcgccct 221  Q
    |||||||| | |||||| ||||||||||||||||||||||||| |||||   |||||||| |||| | |    ||||||||||||| |||||| || | |    
T  23297296 atgttggaaatgatgtttcaacatcttggcacggttcagtgtgtcctgtgcttgtggctttgttttcacgcgctttatcttattaaggaaaccacgtctt 23297197  T
Q  222 atttcttgttcaccaagcaacgcgtttttctccagaatcagctggaaaatttgtttctaaaatataaacaatattttaggattccttggtggtgtgtttg 321  Q
    || |||||||||||||| ||||  ||||| || ||||||  ||||   |||||||  |||| |||| | |||||||||||||||||||||| || |||||    
T  23297196 atctcttgttcaccaagtaacgattttttgtcaagaatcttctgggtgatttgttcataaagtatagataatattttaggattccttggtgttgcgtttg 23297097  T
Q  322 gcggttcctaaagatgtt 339  Q
    || ||||| |||| ||||    
T  23297096 gcagttcccaaagttgtt 23297079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 85 - 353
Target Start/End: Original strand, 23579275 - 23579546
Alignment:
Q  85 gtattggcttcatttttgctaaaacaaatattcatgt---atgttggatacgatgttccaacatcttggcacggttcagtgtgccctgtttatgtggctt 181  Q
    ||||||| |||||| ||||||||| |||||||| | |   |||||||| | | |||||||||||| || |  ||||||||||||| ||  | ||||||||    
T  23579275 gtattggattcattattgctaaaataaatattcttattagatgttggaaatgttgttccaacatcctgacgaggttcagtgtgccttggatttgtggctt 23579374  T
Q  182 ggtttacgcaatatttatcttattaaagaaacctcgccctatttcttgttcaccaagcaacgcgtttttctccagaatcagctggaaaatttgtttctaa 281  Q
    ||||| | |     |||||||||||| |||||| || | ||| |||||||||||||| ||||  ||||  ||||||||   || |   ||||||||||||    
T  23579375 ggttttcacgtacattatcttattaaggaaaccacgtcttatctcttgttcaccaaggaacgtattttagtccagaatattcttggtgatttgtttctaa 23579474  T
Q  282 aatataaacaatattttaggattccttggtggtgtgtttggcggttcctaaagatgttcctactttttagga 353  Q
    | ||||||  ||||||||||||||||||||| | | |  |||||||||||||||||||| ||||| ||||||    
T  23579475 agtataaattatattttaggattccttggtgttttttgaggcggttcctaaagatgttcgtacttcttagga 23579546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 361 - 442
Target Start/End: Original strand, 26194048 - 26194138
Alignment:
Q  361 tatttgtgaaatatattttcaaaagaga---------atatatttctaaagaatatttgtttcaatatatttctgaaaagaatatttgata 442  Q
    |||||||||||||||||| |||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26194048 tatttgtgaaatatatttccaaaagagattttggaagatatatttctaaagaatatttgtttcaatatatttctgaaaagaatatttgata 26194138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 88 - 169
Target Start/End: Original strand, 4793910 - 4793994
Alignment:
Q  88 ttggcttcatttttgctaaaacaaatattcatgt---atgttggatacgatgttccaacatcttggcacggttcagtgtgccctg 169  Q
    ||||||||| ||||||||||||||||||||||||   ||||||||||||||||||||||||| | ||||  ||||||||||||||    
T  4793910 ttggcttcacttttgctaaaacaaatattcatgtgtgatgttggatacgatgttccaacatcgtagcacatttcagtgtgccctg 4793994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 88 - 169
Target Start/End: Complemental strand, 9567737 - 9567653
Alignment:
Q  88 ttggcttcatttttgctaaaacaaatattcatgt---atgttggatacgatgttccaacatcttggcacggttcagtgtgccctg 169  Q
    ||||| ||| ||||||||||||||||||||||||   ||||||||||||||||||||||||| | |||| |||||||||||||||    
T  9567737 ttggcctcacttttgctaaaacaaatattcatgtgtgatgttggatacgatgttccaacatcctagcacagttcagtgtgccctg 9567653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 94 - 231
Target Start/End: Complemental strand, 10252214 - 10252074
Alignment:
Q  94 tcatttttgctaaaacaaatattcatgtatg---ttggatacgatgttccaacatcttggcacggttcagtgtgccctgtttatgtggcttggtttacgc 190  Q
    ||||| ||| ||||| |||||||||||||||   |||||||||||||||||| ||| ||| ||||||||||||  ||||||||||||| ||| |||| ||    
T  10252214 tcattgttgataaaataaatattcatgtatgatgttggatacgatgttccaatatcatggtacggttcagtgtatcctgtttatgtggtttgatttatgc 10252115  T
Q  191 aatatttatcttattaaagaaacctcgccctatttcttgtt 231  Q
     |  ||||||||||||| |||  | |||| |||||||||||    
T  10252114 gagttttatcttattaaggaattcacgccttatttcttgtt 10252074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 89 - 163
Target Start/End: Complemental strand, 14688158 - 14688081
Alignment:
Q  89 tggcttcatttttgctaaaacaaatattcatgtatg---ttggatacgatgttccaacatcttggcacggttcagtgt 163  Q
    |||||| ||| ||||||||||||||||||||| |||   ||||||||||||||||||||| |||||||||||||||||    
T  14688158 tggctttattattgctaaaacaaatattcatgcatgatgttggatacgatgttccaacatgttggcacggttcagtgt 14688081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 361 - 442
Target Start/End: Complemental strand, 15708810 - 15708720
Alignment:
Q  361 tatttgtgaaatatattttcaaaagaga---------atatatttctaaagaatatttgtttcaatatatttctgaaaagaatatttgata 442  Q
    |||||||||||||||||||||||||||          |||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  15708810 tatttgtgaaatatattttcaaaagagcttttggaggatatatttttgaagaatatttgtttcaatatatttctgaaaagaatatttgata 15708720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 389 - 442
Target Start/End: Original strand, 23174474 - 23174527
Alignment:
Q  389 atatatttctaaagaatatttgtttcaatatatttctgaaaagaatatttgata 442  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  23174474 atatatttctgaagaatatttgtttcaatatatttctgaaaaaaatatttgata 23174527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 394 - 442
Target Start/End: Original strand, 17946018 - 17946066
Alignment:
Q  394 tttctaaagaatatttgtttcaatatatttctgaaaagaatatttgata 442  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  17946018 tttctgaagaatatttgtttcaatatatttctgaaaagaatatttgata 17946066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 393 - 442
Target Start/End: Complemental strand, 24814524 - 24814475
Alignment:
Q  393 atttctaaagaatatttgtttcaatatatttctgaaaagaatatttgata 442  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  24814524 atttctgaagaatatttgttttaatatatttctgaaaagaatatttgata 24814475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 291 - 367
Target Start/End: Complemental strand, 7509078 - 7509003
Alignment:
Q  291 aatattttaggattccttggtggtgtgtttggcggttcctaaagatgttcctactttttaggagttaccatatttgt 367  Q
    ||||||||||||| |||||||| | |||||||||||||||||  |||||||||| ||||||||||| | ||||||||    
T  7509078 aatattttaggat-ccttggtgttatgtttggcggttcctaataatgttcctacattttaggagttgctatatttgt 7509003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 122 - 165
Target Start/End: Complemental strand, 12326622 - 12326579
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgc 165  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  12326622 atgttggatacgatgttccaacatcctggcacggttcagtgtgc 12326579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 325 - 367
Target Start/End: Original strand, 4794150 - 4794192
Alignment:
Q  325 gttcctaaagatgttcctactttttaggagttaccatatttgt 367  Q
    |||||||||||||||||||||||||||||||| ||||||||||    
T  4794150 gttcctaaagatgttcctactttttaggagtttccatatttgt 4794192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 122 - 172
Target Start/End: Complemental strand, 21261240 - 21261190
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgccctgttt 172  Q
    |||||||||| |||||||||||||| ||||||||||||||||||| |||||    
T  21261240 atgttggatatgatgttccaacatcctggcacggttcagtgtgccttgttt 21261190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 98 - 169
Target Start/End: Original strand, 4541986 - 4542060
Alignment:
Q  98 ttttgctaaaacaaatattcatgt---atgttggatacgatgttccaacatcttggcacggttcagtgtgccctg 169  Q
    ||||||||||||||||||||| ||   |||||||| || ||||||||||||| ||||| ||||||||||| ||||    
T  4541986 ttttgctaaaacaaatattcaagtgtgatgttggacaccatgttccaacatcctggcatggttcagtgtgtcctg 4542060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 325 - 365
Target Start/End: Complemental strand, 9564902 - 9564862
Alignment:
Q  325 gttcctaaagatgttcctactttttaggagttaccatattt 365  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  9564902 gttcctaaagatgttcctactttttaggagtttccatattt 9564862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 325 - 365
Target Start/End: Complemental strand, 9567496 - 9567456
Alignment:
Q  325 gttcctaaagatgttcctactttttaggagttaccatattt 365  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  9567496 gttcctaaagatgttcctactttttaggagtttccatattt 9567456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 122 - 166
Target Start/End: Complemental strand, 10661672 - 10661628
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgcc 166  Q
    ||||||||||||||||||||||||| | |||||||||||||||||    
T  10661672 atgttggatacgatgttccaacatcctagcacggttcagtgtgcc 10661628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 122 - 166
Target Start/End: Complemental strand, 14927455 - 14927411
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgcc 166  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||    
T  14927455 atgttggatacgatgttccaacatcctggcacggtttagtgtgcc 14927411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 122 - 166
Target Start/End: Complemental strand, 15350921 - 15350877
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgcc 166  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||    
T  15350921 atgttggatacgatgttccaacatcctggcacggtttagtgtgcc 15350877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 80 - 135
Target Start/End: Complemental strand, 15711816 - 15711758
Alignment:
Q  80 tttgggtattggcttcatttttgctaaaacaaatattcatgt---atgttggatacgat 135  Q
    |||| |||||||||||||| ||||||||||||||||||||||   ||||||||||||||    
T  15711816 tttgtgtattggcttcattattgctaaaacaaatattcatgtttgatgttggatacgat 15711758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 122 - 166
Target Start/End: Complemental strand, 20992353 - 20992309
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgcc 166  Q
    |||||||||| |||||||||||||| |||||||||||||||||||    
T  20992353 atgttggatatgatgttccaacatcctggcacggttcagtgtgcc 20992309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 122 - 166
Target Start/End: Original strand, 23082125 - 23082169
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgcc 166  Q
    |||||||||| |||||||||||||| |||||||||||||||||||    
T  23082125 atgttggatatgatgttccaacatcctggcacggttcagtgtgcc 23082169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 122 - 166
Target Start/End: Complemental strand, 23960835 - 23960791
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgcc 166  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||    
T  23960835 atgttggatacgatgttccaacatcctggcacgattcagtgtgcc 23960791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 122 - 166
Target Start/End: Original strand, 26132304 - 26132348
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgcc 166  Q
    |||||||||| |||||||||||||| |||||||||||||||||||    
T  26132304 atgttggatatgatgttccaacatcctggcacggttcagtgtgcc 26132348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 86 - 164
Target Start/End: Original strand, 23174062 - 23174143
Alignment:
Q  86 tattggcttcatttttgctaaaacaaatattcatgtatg---ttggatacgatgttccaacatcttggcacggttcagtgtg 164  Q
    ||||| ||||||| ||| ||||||||||| |||||||||   |||||||| |||||| ||||||||| ||| ||||||||||    
T  23174062 tattgacttcattgttggtaaaacaaatactcatgtatgatgttggatacaatgttctaacatcttgacacagttcagtgtg 23174143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 169
Target Start/End: Original strand, 9893425 - 9893467
Alignment:
Q  127 ggatacgatgttccaacatcttggcacggttcagtgtgccctg 169  Q
    ||||||||||||||||||| |||||||| ||||||||||||||    
T  9893425 ggatacgatgttccaacatgttggcacgcttcagtgtgccctg 9893467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 122 - 172
Target Start/End: Original strand, 20924456 - 20924506
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgccctgttt 172  Q
    ||||||||||||||||||||||||| ||||| | ||||||||||| |||||    
T  20924456 atgttggatacgatgttccaacatcctggcaagattcagtgtgccttgttt 20924506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 122 - 166
Target Start/End: Complemental strand, 10280654 - 10280610
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgcc 166  Q
    |||||||||||||| |||||||||| || ||||||||||||||||    
T  10280654 atgttggatacgatattccaacatcctgccacggttcagtgtgcc 10280610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 122 - 166
Target Start/End: Original strand, 16207230 - 16207274
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgcc 166  Q
    |||||||||| |||||||||||||| ||||| |||||||||||||    
T  16207230 atgttggatatgatgttccaacatcctggcatggttcagtgtgcc 16207274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 270 - 356
Target Start/End: Complemental strand, 10252043 - 10251958
Alignment:
Q  270 atttgtttctaaaatataaacaatattttaggattccttggtggtgtgtttggcggttcctaaagatgttcctactttttaggagtt 356  Q
    ||||||| ||||| |||| |||||||||||||| || || ||||||| |||||  ||||||||| ||||||  | ||||||||||||    
T  10252043 atttgttcctaaagtatagacaatattttaggaatcttttgtggtgt-tttggtagttcctaaaaatgttctgattttttaggagtt 10251958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 122 - 164
Target Start/End: Complemental strand, 42637016 - 42636974
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtg 164  Q
    |||||| ||||||||||||||| || |||||||||||||||||    
T  42637016 atgttgaatacgatgttccaacgtcctggcacggttcagtgtg 42636974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 145
Target Start/End: Complemental strand, 10661997 - 10661932
Alignment:
Q  85 gtattggcttcatttttgctaaaacaaatattcatgt-----atgttggatacgatgttccaacat 145  Q
    ||||||||| |||| |||||||||||||||| |||||     ||||||||||| ||||||||||||    
T  10661997 gtattggctgcattattgctaaaacaaatatccatgtttgtgatgttggatactatgttccaacat 10661932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 161
Target Start/End: Original strand, 12560546 - 12560625
Alignment:
Q  86 tattggcttcatttttgc-taaaacaaatattcatgt---atgttggatacgatgttccaacatcttggcacggttcagt 161  Q
    ||||| ||||| |||||| ||||||||||||||||||   |||||| | ||||||| |||||||| ||||| ||||||||    
T  12560546 tattgacttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcctggcatggttcagt 12560625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 161
Target Start/End: Complemental strand, 30226895 - 30226816
Alignment:
Q  86 tattggcttcatttttgc-taaaacaaatattcatg---tatgttggatacgatgttccaacatcttggcacggttcagt 161  Q
    ||||||||||| |||||| |||||||||||||||||    |||||||| ||||||| |||||||| ||||| | ||||||    
T  30226895 tattggcttcacttttgcctaaaacaaatattcatgggagatgttggacacgatgtgccaacatcctggcatgattcagt 30226816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 122 - 166
Target Start/End: Complemental strand, 645942 - 645898
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgcc 166  Q
    ||||||||| ||||| | ||||||| |||||||||||||||||||    
T  645942 atgttggatgcgatgcttcaacatcctggcacggttcagtgtgcc 645898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 122 - 166
Target Start/End: Complemental strand, 4459549 - 4459505
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgcc 166  Q
    ||||||||||| ||||||||||||| | ||||| |||||||||||    
T  4459549 atgttggatacaatgttccaacatcctagcacgattcagtgtgcc 4459505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 327 - 367
Target Start/End: Complemental strand, 14927252 - 14927212
Alignment:
Q  327 tcctaaagatgttcctactttttaggagttaccatatttgt 367  Q
    |||||||||||||||||| |||||||| || ||||||||||    
T  14927252 tcctaaagatgttcctacattttaggactttccatatttgt 14927212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 327 - 367
Target Start/End: Complemental strand, 15350718 - 15350678
Alignment:
Q  327 tcctaaagatgttcctactttttaggagttaccatatttgt 367  Q
    |||||||||||||||||| |||||||| || ||||||||||    
T  15350718 tcctaaagatgttcctacattttaggactttccatatttgt 15350678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 122 - 166
Target Start/End: Complemental strand, 24902915 - 24902872
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgcc 166  Q
    |||||||||| |||||||||||||| | |||||||||||||||||    
T  24902915 atgttggatatgatgttccaacatcct-gcacggttcagtgtgcc 24902872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 122; Significance: 2e-62; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 170 - 367
Target Start/End: Original strand, 47940369 - 47940565
Alignment:
Q  170 tttatgtggcttggtttacgcaatatttatcttattaaagaaacctcgccctatttcttgttcaccaagcaacgcgtttttctccagaatcagctggaaa 269  Q
    ||||||||||||| |||||||||| ||||||||||||| |||||| |||| |||||| |||||||||| |||||||||||  ||||||||||||| |||     
T  47940369 tttatgtggcttgatttacgcaatctttatcttattaaggaaaccacgccttatttcatgttcaccaaacaacgcgtttta-tccagaatcagctagaag 47940467  T
Q  270 atttgtttctaaaatataaacaatattttaggattccttggtggtgtgtttggcggttcctaaagatgttcctactttttaggagttaccatatttgt 367  Q
    |||||||||||||| || |||||||||||||||||| ||||  |||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  47940468 atttgtttctaaaacatgaacaatattttaggattctttggcagtgtgtttggcggttcctaaaagtgttcctactttttaggagttaccatatttgt 47940565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 122 - 356
Target Start/End: Original strand, 51471440 - 51471673
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgccctgtttatgtggcttggtttacgcaatatttatcttattaaagaaacctcgccct 221  Q
    |||||||||| || ||||||||||| ||||||||||||||||||||||||| ||||||||| ||| | |    ||||||||||||| |||||| || | |    
T  51471440 atgttggatatgaagttccaacatcctggcacggttcagtgtgccctgtttgtgtggcttgattttcacgcgctttatcttattaaggaaaccacgtctt 51471539  T
Q  222 atttcttgttcaccaagcaacgcgtttttctccagaatcagctggaaaatttgtttctaaaatataaacaatattttaggattccttggtggtgtgtttg 321  Q
    | ||||||||||||||| || | |||||| |||||||||| |||| | |||| || ||||| |||| | |||||||||||||||||||||||||| || |    
T  51471540 aattcttgttcaccaagtaatgtgtttttgtccagaatcaactgggagattt-ttcctaaagtatagaaaatattttaggattccttggtggtgttttag 51471638  T
Q  322 gcggttcctaaagatgttcctactttttaggagtt 356  Q
    || |||||||||||||||| ||||||||| |||||    
T  51471639 gcagttcctaaagatgttcttactttttaagagtt 51471673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 80 - 189
Target Start/End: Original strand, 22347930 - 22348039
Alignment:
Q  80 tttgggtattggcttcatttttgctaaaacaaatattcatgtatgttggatacgatgttccaacatcttggcacggttcagtgtgccctgtttatgtggc 179  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  22347930 tttgggtattggcttcattgttgctaaaacaaatactcatgtatgttggatacgatgttctaacatcttggcacggttcagtgtgccctgtttatgtggc 22348029  T
Q  180 ttggtttacg 189  Q
    ||||||||||    
T  22348030 ttggtttacg 22348039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 80 - 188
Target Start/End: Complemental strand, 8282775 - 8282664
Alignment:
Q  80 tttgggtattggcttcatttttgctaaaacaaatattcatgtatg---ttggatacgatgttccaacatcttggcacggttcagtgtgccctgtttatgt 176  Q
    |||| |||||||| ||||| ||||||||||||||| |||||||||   |||||||||||||||||||||| || ||| |||||||| ||| |||||||||    
T  8282775 tttgagtattggcctcattgttgctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcctgacacagttcagtgagccttgtttatgt 8282676  T
Q  177 ggcttggtttac 188  Q
    | |||| |||||    
T  8282675 gccttgttttac 8282664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 88 - 166
Target Start/End: Complemental strand, 12753907 - 12753826
Alignment:
Q  88 ttggcttcatttttgctaaaacaaatattcatgtatg---ttggatacgatgttccaacatcttggcacggttcagtgtgcc 166  Q
    ||||||||||| ||||||||||||||| |||| ||||   |||||||||||||||||||||| |||||||||||||||||||    
T  12753907 ttggcttcattgttgctaaaacaaatactcatatatgatgttggatacgatgttccaacatcctggcacggttcagtgtgcc 12753826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 389 - 442
Target Start/End: Original strand, 22963864 - 22963917
Alignment:
Q  389 atatatttctaaagaatatttgtttcaatatatttctgaaaagaatatttgata 442  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  22963864 atatatttctaaagaatatttatttcaatatatttctgaaaagaatatttgata 22963917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 195 - 367
Target Start/End: Original strand, 17355246 - 17355418
Alignment:
Q  195 tttatcttattaaagaaacctcgccctatttcttgttcaccaagcaacgcgtttttctccagaatcagctggaaaatttgtttctaaaatataaacaata 294  Q
    ||||||||||||| |   || |||| |||||||||||  ||||| ||||||||||| ||||| |||  |||||| ||||||| |||||||||| ||||||    
T  17355246 tttatcttattaaggtttccacgccttatttcttgttggccaagtaacgcgtttttgtccaggatctactggaagatttgttcctaaaatatacacaata 17355345  T
Q  295 -ttttaggattccttggtggtgtgtttggcggttcctaaagatgttcctactttttaggagttaccatatttgt 367  Q
     |||||| |   ||| | | | ||||||||||||||||||||||||  ||||||||||||| | | ||||||||    
T  17355346 tttttagcaaatctttg-gatatgtttggcggttcctaaagatgtttatactttttaggagatgctatatttgt 17355418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 394 - 441
Target Start/End: Original strand, 47940784 - 47940831
Alignment:
Q  394 tttctaaagaatatttgtttcaatatatttctgaaaagaatatttgat 441  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  47940784 tttctaaagaatatttgtttcaatatatttcagaaaagaatatttgat 47940831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 122 - 172
Target Start/End: Original strand, 10339508 - 10339558
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgccctgttt 172  Q
    |||||||||||||||||||||||||||| |||||||||||||||| |||||    
T  10339508 atgttggatacgatgttccaacatcttgacacggttcagtgtgccttgttt 10339558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 394 - 442
Target Start/End: Original strand, 47940923 - 47940971
Alignment:
Q  394 tttctaaagaatatttgtttcaatatatttctgaaaagaatatttgata 442  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  47940923 tttctgaagaatatttgtttcaatatatttctgaagagaatatttgata 47940971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 133 - 260
Target Start/End: Original strand, 15914804 - 15914931
Alignment:
Q  133 gatgttccaacatcttggcacggttcagtgtgccctgtttatgtggcttggtttacgcaatatttatcttattaaagaaacctcgccctatttcttgttc 232  Q
    |||||| |||||||||| |||||||||||||||| |||||||||| || | | ||| ||   ||||||||||||| |||  | |||| |||||||||||     
T  15914804 gatgttgcaacatcttgacacggttcagtgtgccttgtttatgtgtctagttgtacacacgctttatcttattaaggaattcacgccttatttcttgttg 15914903  T
Q  233 accaagcaacgcgtttttctccagaatc 260  Q
      |||| ||| ||||||| |||||||||    
T  15914904 gtcaagtaacacgtttttgtccagaatc 15914931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 88 - 177
Target Start/End: Original strand, 18379405 - 18379497
Alignment:
Q  88 ttggcttcatttttgctaaaacaaatattcatgta---tgttggatacgatgttccaacatcttggcacggttcagtgtgccctgtttatgtg 177  Q
    ||||| ||||| ||| ||||| ||||||||||| |   |||||||||||||||| |||||| | || |||||||||||||||||| |||||||    
T  18379405 ttggcctcattattgttaaaaaaaatattcatgcaagatgttggatacgatgtttcaacatgtgggtacggttcagtgtgccctgattatgtg 18379497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 122 - 166
Target Start/End: Original strand, 20200438 - 20200482
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgcc 166  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||    
T  20200438 atgttggatacgatgttccaacatcctggcacggttcagtatgcc 20200482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 122 - 166
Target Start/End: Original strand, 26971747 - 26971791
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgcc 166  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||    
T  26971747 atgttggatacgatgctccaacatcctggcacggttcagtgtgcc 26971791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 316 - 367
Target Start/End: Original strand, 17379159 - 17379210
Alignment:
Q  316 tgtttggcggttcctaaagatgttcctactttttaggagttaccatatttgt 367  Q
    |||||||||||||||||||||||| |||||||||||||| | | ||||||||    
T  17379159 tgtttggcggttcctaaagatgtttctactttttaggagatgctatatttgt 17379210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 123 - 166
Target Start/End: Original strand, 22891151 - 22891194
Alignment:
Q  123 tgttggatacgatgttccaacatcttggcacggttcagtgtgcc 166  Q
    |||||||||| ||||||||||||| |||||||||||||||||||    
T  22891151 tgttggatactatgttccaacatcctggcacggttcagtgtgcc 22891194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 86 - 161
Target Start/End: Original strand, 11084991 - 11085070
Alignment:
Q  86 tattggcttcatttttgc-taaaacaaatattcatgt---atgttggatacgatgttccaacatcttggcacggttcagt 161  Q
    ||||||||||| |||||| ||||||||||||||||||   |||||| | ||||||| |||||||| ||||| ||||||||    
T  11084991 tattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcctggcatggttcagt 11085070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 80 - 152
Target Start/End: Original strand, 51471355 - 51471430
Alignment:
Q  80 tttgggtattggcttcatttttgctaaaacaaatattcatgt---atgttggatacgatgttccaacatcttggca 152  Q
    |||| |||||| ||||||| |||||||||||||| |||||||   |||||||||| | |||| |||||||||||||    
T  51471355 tttgtgtattgacttcattattgctaaaacaaatgttcatgtaccatgttggatatgttgtttcaacatcttggca 51471430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 85 - 146
Target Start/End: Original strand, 17355113 - 17355170
Alignment:
Q  85 gtattggcttcatttttgctaaaacaaatattcatgtatgttggatacgatgttccaacatc 146  Q
    |||||||| ||||||||||||||||||||||||||||    |||||| | ||||||||||||    
T  17355113 gtattggcctcatttttgctaaaacaaatattcatgt----tggatatgttgttccaacatc 17355170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 122 - 166
Target Start/End: Original strand, 20840613 - 20840657
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgcc 166  Q
    ||||||||||||||||||||||||| || ||| ||||||||||||    
T  20840613 atgttggatacgatgttccaacatcctgacacagttcagtgtgcc 20840657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 122 - 166
Target Start/End: Original strand, 23477285 - 23477329
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgcc 166  Q
    |||||| |||| |||||||||||||||||||||||||| ||||||    
T  23477285 atgttgaatacaatgttccaacatcttggcacggttcaatgtgcc 23477329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 122 - 164
Target Start/End: Original strand, 11667252 - 11667294
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtg 164  Q
    ||||||||||||||||||||||||| |||||| ||| ||||||    
T  11667252 atgttggatacgatgttccaacatcatggcacagttaagtgtg 11667294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 122 - 164
Target Start/End: Complemental strand, 24986793 - 24986751
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtg 164  Q
    ||||||||||| ||||||||||||  |||||||||||||||||    
T  24986793 atgttggatacaatgttccaacattctggcacggttcagtgtg 24986751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 353
Target Start/End: Complemental strand, 12753675 - 12753638
Alignment:
Q  316 tgtttggcggttcctaaagatgttcctactttttagga 353  Q
    |||||||  |||||||||||||||||||||||||||||    
T  12753675 tgtttggaagttcctaaagatgttcctactttttagga 12753638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 143
Target Start/End: Original strand, 15803479 - 15803540
Alignment:
Q  87 attggcttcatttttgctaaaacaaatattcatgt-----atgttggatacgatgttccaac 143  Q
    ||||||| |||| ||||||||||||||||||||||      |||||||||||||||||||||    
T  15803479 attggctgcattattgctaaaacaaatattcatgtttgtgttgttggatacgatgttccaac 15803540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 145
Target Start/End: Original strand, 23477199 - 23477264
Alignment:
Q  85 gtattggcttcatttttgctaaaacaaatattcatgta-----tgttggatacgatgttccaacat 145  Q
    ||||||||| |||| |||||||||||||||||||| ||     |||||||||| ||||||||||||    
T  23477199 gtattggctgcattgttgctaaaacaaatattcatatatgtgttgttggatactatgttccaacat 23477264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 161
Target Start/End: Complemental strand, 33063212 - 33063133
Alignment:
Q  86 tattggcttcatttttg-ctaaaacaaatattcatgt---atgttggatacgatgttccaacatcttggcacggttcagt 161  Q
    |||| |||||| ||||| |||||||||||||||||||   |||||| | ||||||| |||||||| ||||| ||||||||    
T  33063212 tattagcttcacttttgtctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcctggcatggttcagt 33063133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 161
Target Start/End: Original strand, 45598662 - 45598741
Alignment:
Q  86 tattggcttcatttttg-ctaaaacaaatattcatgt---atgttggatacgatgttccaacatcttggcacggttcagt 161  Q
    |||| |||||||||||| |||||||||||||| ||||   |||||| | ||||||| |||||||| ||||| ||||||||    
T  45598662 tattagcttcatttttggctaaaacaaatatttatgtgagatgttgaacacgatgtgccaacatcctggcatggttcagt 45598741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 122 - 166
Target Start/End: Complemental strand, 1626383 - 1626339
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgcc 166  Q
    |||||||||| |||||||||||||| ||| || ||||||||||||    
T  1626383 atgttggatatgatgttccaacatcctggaacagttcagtgtgcc 1626339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 122 - 166
Target Start/End: Complemental strand, 9452216 - 9452172
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgcc 166  Q
    ||||||||||||||| ||||||||  |||||| ||||||||||||    
T  9452216 atgttggatacgatgctccaacattctggcacagttcagtgtgcc 9452172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 122 - 166
Target Start/End: Complemental strand, 13150102 - 13150058
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgcc 166  Q
    ||||||||| ||||| | ||||||| |||||||||||||||||||    
T  13150102 atgttggatgcgatgcttcaacatcctggcacggttcagtgtgcc 13150058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 85 - 121
Target Start/End: Original strand, 17838242 - 17838278
Alignment:
Q  85 gtattggcttcatttttgctaaaacaaatattcatgt 121  Q
    ||||||||| |||| ||||||||||||||||||||||    
T  17838242 gtattggctgcattattgctaaaacaaatattcatgt 17838278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 80 - 120
Target Start/End: Original strand, 18389419 - 18389459
Alignment:
Q  80 tttgggtattggcttcatttttgctaaaacaaatattcatg 120  Q
    |||| |||||||| ||||| |||||||||||||||||||||    
T  18389419 tttgtgtattggcctcattattgctaaaacaaatattcatg 18389459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 122 - 166
Target Start/End: Original strand, 25349578 - 25349622
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgcc 166  Q
    |||||||||| ||| |||||||||| ||||| |||||||||||||    
T  25349578 atgttggatatgatattccaacatcctggcatggttcagtgtgcc 25349622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 114; Significance: 1e-57; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 104 - 356
Target Start/End: Original strand, 23863622 - 23863877
Alignment:
Q  104 taaaacaaatattcatgta---tgttggatacgatgttccaacatcttggcacggttcagtgtgccctgtttatgtggcttggtttacgcaatatttatc 200  Q
    ||||||||||| |||||||   ||||||||| |||||||||| || ||||||| |||||||||||||||||| ||||||||||||| ||| |  ||||||    
T  23863622 taaaacaaatactcatgtaggatgttggatatgatgttccaaaatgttggcacagttcagtgtgccctgtttgtgtggcttggttttcgcgaactttatc 23863721  T
Q  201 ttattaaagaaacctcgccctatttcttgttcaccaagcaacgcgtttttctccagaatcagctggaaaatttgtttctaaaatataaacaatattttag 300  Q
    || |||  |||||| |  | |||||||||||||||||| |||   ||||| |||||||||||||||   |||||||||||||||||| ||||||||||||    
T  23863722 tttttacggaaaccacaacttatttcttgttcaccaagtaacatatttttgtccagaatcagctgggtgatttgtttctaaaatatagacaatattttag 23863821  T
Q  301 gattccttggtggtgtgtttggcggttcctaaagatgttcctactttttaggagtt 356  Q
    |||||||||||| ||||||| | | || |||||||||||| |||||||||||||||    
T  23863822 gattccttggtgatgtgtttcgagctttctaaagatgttcatactttttaggagtt 23863877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 80 - 350
Target Start/End: Original strand, 24849469 - 24849735
Alignment:
Q  80 tttgggtattggcttcatttttgctaaaacaaatattcatgtatg---ttggatacgatgttccaacatcttggcacggttcagtgtgccctgtttatgt 176  Q
    |||| |||||| ||||||| ||||||||||||||| |||||||||   |||||||| |||||| ||||| ||||||       |||| |||||| | |||    
T  24849469 tttgagtattgacttcattgttgctaaaacaaatactcatgtatgatgttggatacaatgttctaacattttggca-------gtgtaccctgtctgtgt 24849561  T
Q  177 ggcttggtttacgcaatatttatcttattaaagaaacctcgccctatttcttgttcaccaagcaacgcgtttttctccagaatcagctggaaaatttgtt 276  Q
    |||||||||| ||| |  |||||||| |||| |||||| |  | |||||||||||||||||| |||   ||||| ||||||||||||||    |||||||    
T  24849562 ggcttggttttcgcgaactttatctttttaaggaaaccacaacttatttcttgttcaccaagtaacatatttttgtccagaatcagctgagtgatttgtt 24849661  T
Q  277 tctaaaatataaacaatattttaggattccttggtggtgtgtttggcggttcctaaagatgttcctacttttta 350  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  24849662 tctaaaatatagacaatattttaggattccttggtggtgtgtttggcggttcctaaagatgttcctacatttta 24849735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 133 - 356
Target Start/End: Original strand, 12813971 - 12814193
Alignment:
Q  133 gatgttccaacatcttggcacggttcagtgtgccctgtttatgtggcttggtttacgcaatatttatcttattaaagaaacctcgccctatttcttgttc 232  Q
    |||||||||||||||||||||||||||||| |||||| || ||||||||||||| | |    ||||||||||||| |||||| |||| ||| ||||||||    
T  12813971 gatgttccaacatcttggcacggttcagtgggccctggttttgtggcttggttttcacgcactttatcttattaaggaaaccacgccttatctcttgttc 12814070  T
Q  233 accaagcaacgcgtttttctccagaatcagctggaaaatttgtttctaaaatataaacaatattttaggattccttggtggtgtgtttggcggttcctaa 332  Q
    |||||| ||||  ||||| |||| ||||  ||||   ||||||| ||||| |||| | |||||||||||||||||||||| |||||||||||||||||||    
T  12814071 accaagtaacgtatttttgtcca-aatcttctgggtgatttgttcctaaagtatagataatattttaggattccttggtgttgtgtttggcggttcctaa 12814169  T
Q  333 agatgttcctactttttaggagtt 356  Q
    ||||||||||||||||||||||||    
T  12814170 agatgttcctactttttaggagtt 12814193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 361 - 442
Target Start/End: Original strand, 23864002 - 23864092
Alignment:
Q  361 tatttgtgaaatatattttcaaaagaga---------atatatttctaaagaatatttgtttcaatatatttctgaaaagaatatttgata 442  Q
    ||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  23864002 tatttgtgaaatatattttcaaaagagattttgaaagatatatttctaaagaatatttgtttcaatatatttctgaaaagaatattagata 23864092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 361 - 441
Target Start/End: Original strand, 24849854 - 24849943
Alignment:
Q  361 tatttgtgaaatatattttcaaaagaga---------atatatttctaaagaatatttgtttcaatatatttctgaaaagaatatttgat 441  Q
    ||||||||||||||||||||||||||||         |||||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  24849854 tatttgtgaaatatattttcaaaagagattttggaagatatatttctgaagaatatttgtttcaatatatttctaaaaagaatatttgat 24849943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 122 - 172
Target Start/End: Complemental strand, 18622471 - 18622421
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgccctgttt 172  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  18622471 atgttggatacgatgttccaacatcttggcacggttcagtgtgccttgttt 18622421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 88 - 231
Target Start/End: Complemental strand, 1684802 - 1684656
Alignment:
Q  88 ttggcttcatttttgctaaaacaaatattcatgt---atgttggatacgatgttccaacatcttggcacggttcagtgtgccctgtttatgtggcttggt 184  Q
    |||||||||| ||| |||||||||||||||||||   ||||| ||||||||| ||||||||| | |||| |||||||||||||||    |||| |  | |    
T  1684802 ttggcttcatattttctaaaacaaatattcatgtgtcatgtttgatacgatgctccaacatcctagcacagttcagtgtgccctgaagttgtgccaagat 1684703  T
Q  185 ttacgcaatatttatcttattaaagaaacctcgccctatttcttgtt 231  Q
    ||||||||  |||||||| || | |||||| |||| |||||||||||    
T  1684702 ttacgcaagctttatctttttgaggaaaccacgccttatttcttgtt 1684656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 88 - 182
Target Start/End: Original strand, 12376205 - 12376302
Alignment:
Q  88 ttggcttcatttttgctaaaacaaatattcatg---tatgttggatacgatgttccaacatcttggcacggttcagtgtgccctgtttatgtggcttg 182  Q
    ||||| ||||| |||||||||||||||||||||    |||||||||| ||||||||||||  | || | |||||||||||||||| || |||| ||||    
T  12376205 ttggcctcattattgctaaaacaaatattcatgcaagatgttggataagatgttccaacaggtgggtatggttcagtgtgccctgattttgtgtcttg 12376302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 122 - 164
Target Start/End: Complemental strand, 26537097 - 26537055
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtg 164  Q
    |||||||||| |||||||||||||| |||||||||||||||||    
T  26537097 atgttggatatgatgttccaacatcatggcacggttcagtgtg 26537055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 325 - 366
Target Start/End: Complemental strand, 1684561 - 1684520
Alignment:
Q  325 gttcctaaagatgttcctactttttaggagttaccatatttg 366  Q
    |||||||||||||||||||| ||||||||||| |||||||||    
T  1684561 gttcctaaagatgttcctaccttttaggagtttccatatttg 1684520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 85 - 145
Target Start/End: Complemental strand, 9997620 - 9997555
Alignment:
Q  85 gtattggcttcatttttgctaaaacaaatattcatgt-----atgttggatacgatgttccaacat 145  Q
    ||||||||| |||| ||||||||||||||||||||||     ||||||||||| ||||||||||||    
T  9997620 gtattggctgcattattgctaaaacaaatattcatgtttgtaatgttggatactatgttccaacat 9997555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 86 - 161
Target Start/End: Original strand, 17880070 - 17880149
Alignment:
Q  86 tattggcttcatttttgc-taaaacaaatattcatgt---atgttggatacgatgttccaacatcttggcacggttcagt 161  Q
    ||||||||||| |||||| |||||||||||| |||||   |||||| | ||||||| |||||||||||||| ||||||||    
T  17880070 tattggcttcacttttgcctaaaacaaatatgcatgtgagatgttgaacacgatgtgccaacatcttggcatggttcagt 17880149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 122 - 166
Target Start/End: Original strand, 20254226 - 20254270
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgcc 166  Q
    |||||||||| |||||||||||||| || ||||||||||||||||    
T  20254226 atgttggatatgatgttccaacatcctgacacggttcagtgtgcc 20254270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 316 - 367
Target Start/End: Original strand, 20254420 - 20254471
Alignment:
Q  316 tgtttggcggttcctaaagatgttcctactttttaggagttaccatatttgt 367  Q
    |||||||| |||||||||||| ||||||| |||||||| || ||||||||||    
T  20254420 tgtttggcagttcctaaagatattcctaccttttaggactttccatatttgt 20254471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 88 - 166
Target Start/End: Complemental strand, 23250564 - 23250483
Alignment:
Q  88 ttggcttcatttttgctaaaacaaatattcatgtatg---ttggatacgatgttccaacatcttggcacggttcagtgtgcc 166  Q
    |||||| || |||| ||| |||||||||||| || ||   ||||| |||||||||||||||| ||||| |||||||||||||    
T  23250564 ttggctgcactttttctacaacaaatattcaagtgtgatattggacacgatgttccaacatcctggcatggttcagtgtgcc 23250483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 123
Target Start/End: Original strand, 23867580 - 23867623
Alignment:
Q  80 tttgggtattggcttcatttttgctaaaacaaatattcatgtat 123  Q
    |||| |||||||||||||| ||||||||||||||| ||||||||    
T  23867580 tttgagtattggcttcattgttgctaaaacaaatactcatgtat 23867623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 124 - 166
Target Start/End: Complemental strand, 22485941 - 22485899
Alignment:
Q  124 gttggatacgatgttccaacatcttggcacggttcagtgtgcc 166  Q
    ||||||||||||| ||||||||| |||||| ||||||||||||    
T  22485941 gttggatacgatgctccaacatcctggcacagttcagtgtgcc 22485899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 22 - 68
Target Start/End: Original strand, 27860484 - 27860530
Alignment:
Q  22 ttacagtgagtgcaaaattcaggcaatcccttgtattcgatttccac 68  Q
    ||||||||||||||||| |||||||| |||| |||||| ||||||||    
T  27860484 ttacagtgagtgcaaaagtcaggcaacccctcgtattcaatttccac 27860530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 122 - 166
Target Start/End: Complemental strand, 9997306 - 9997263
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgcc 166  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||    
T  9997306 atgttggatacgatgttcta-cattttggcacggttcagtgtgcc 9997263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 126 - 166
Target Start/End: Original strand, 23540760 - 23540800
Alignment:
Q  126 tggatacgatgttccaacatcttggcacggttcagtgtgcc 166  Q
    ||||||||||||||||||||| |||||| ||| ||||||||    
T  23540760 tggatacgatgttccaacatcctggcacagtttagtgtgcc 23540800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 122 - 166
Target Start/End: Original strand, 27924802 - 27924846
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgcc 166  Q
    |||||||||| |||||||||||||| || |||| |||||||||||    
T  27924802 atgttggataagatgttccaacatcctgacacgattcagtgtgcc 27924846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 122 - 166
Target Start/End: Complemental strand, 33962543 - 33962499
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgcc 166  Q
    ||||||||||  ||||||||||||| |||||| ||||||||||||    
T  33962543 atgttggatattatgttccaacatcctggcacagttcagtgtgcc 33962499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 73; Significance: 4e-33; HSPs: 4)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 88 - 191
Target Start/End: Original strand, 52254 - 52360
Alignment:
Q  88 ttggcttcatttttgctaaaacaaatattcatgtatg---ttggatacgatgttccaacatcttggcacggttcagtgtgccctgtttatgtggcttggt 184  Q
    ||||||||| |||||| ||||||||||||||||||||   |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| |    
T  52254 ttggcttcacttttgcaaaaacaaatattcatgtatgatgttggatacgatgttccaacatcttggtacggttcagtgtcccctgtttatgtggcttgat 52353  T
Q  185 ttacgca 191  Q
    |||||||    
T  52354 ttacgca 52360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064; HSP #2
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 92 - 187
Target Start/End: Original strand, 45284 - 45382
Alignment:
Q  92 cttcatttttgctaaaacaaatattcatgtatg---ttggatacgatgttccaacatcttggcacggttcagtgtgccctgtttatgtggcttggttta 187  Q
    ||||| |||| ||||||||||||||||||||||   |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  45284 cttcactttttctaaaacaaatattcatgtatgatgttggatacgatgttccaacatcttggcatggttcagtgtgccctgtttatgtggcttgattta 45382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 325 - 366
Target Start/End: Original strand, 45513 - 45554
Alignment:
Q  325 gttcctaaagatgttcctactttttaggagttaccatatttg 366  Q
    ||||||||||||||||||||||||||||  ||||||||||||    
T  45513 gttcctaaagatgttcctactttttaggctttaccatatttg 45554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 325 - 367
Target Start/End: Original strand, 52486 - 52528
Alignment:
Q  325 gttcctaaagatgttcctactttttaggagttaccatatttgt 367  Q
    |||||||||||||||||||||||||| | |||||| |||||||    
T  52486 gttcctaaagatgttcctactttttaagtgttaccgtatttgt 52528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0520 (Bit Score: 59; Significance: 8e-25; HSPs: 2)
Name: scaffold0520
Description:

Target: scaffold0520; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 86 - 282
Target Start/End: Complemental strand, 5816 - 5616
Alignment:
Q  86 tattggcttcatttttgctaaaacaaatattcatgtatg---ttggatacgatgttccaacatcttggcacggttcagtgtgccctgtttatgtggcttg 182  Q
    |||| |||||| |||| ||||||||||||||||| ||||   ||||||| |||||||||||||| ||||| ||||||||||||||||||||||||  |||    
T  5816 tattagcttcacttttcctaaaacaaatattcatatatgatgttggatatgatgttccaacatcctggcatggttcagtgtgccctgtttatgtgtgttg 5717  T
Q  183 gtttacgcaatatttatcttattaaagaaacctcgccctatttcttgttcaccaagcaacg-cgtttttctccagaatcagctggaaaatttgtttctaa 281  Q
    | || || |   ||||||||||||| ||  || |||| |||||||||||| ||| | ||||   ||||| |||||||||||| |  | ||||||||||||    
T  5716 gctttcgtacactttatcttattaaggattccacgccttatttcttgttcgccatgtaacgttctttttgtccagaatcagcagtgagatttgtttctaa 5617  T
Q  282 a 282  Q
    |    
T  5616 a 5616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0520; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 103 - 177
Target Start/End: Complemental strand, 12054 - 11977
Alignment:
Q  103 ctaaaacaaatattcatgtatg---ttggatacgatgttccaacatcttggcacggttcagtgtgccctgtttatgtg 177  Q
    ||||||||||||||||| ||||   ||||||| |||||||||||||| ||||| ||||||||||||||||||||||||    
T  12054 ctaaaacaaatattcatatatgatgttggatatgatgttccaacatcctggcatggttcagtgtgccctgtttatgtg 11977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 88 - 169
Target Start/End: Original strand, 50222 - 50306
Alignment:
Q  88 ttggcttcatttttgctaaaacaaatattcatgt---atgttggatacgatgttccaacatcttggcacggttcagtgtgccctg 169  Q
    ||||||||| ||||||||||||||||||||||||   ||||||||||||||||||||||||| | |||| |||||||||||||||    
T  50222 ttggcttcacttttgctaaaacaaatattcatgtgtgatgttggatacgatgttccaacatcctagcacagttcagtgtgccctg 50306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 325 - 367
Target Start/End: Original strand, 73799 - 73841
Alignment:
Q  325 gttcctaaagatgttcctactttttaggagttaccatatttgt 367  Q
    |||||||||||||||||||||||||||||||| ||||||||||    
T  73799 gttcctaaagatgttcctactttttaggagtttccatatttgt 73841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 270 - 353
Target Start/End: Original strand, 9540 - 9623
Alignment:
Q  270 atttgtttctaaaatataaacaatattttaggattccttggtggtgtgtttggcggttcctaaagatgttcctactttttagga 353  Q
    ||||||||||||| |||| |  ||||||||||||| ||||||| ||| |  |||||||||||||||||||||||||||||||||    
T  9540 atttgtttctaaagtatagattatattttaggattacttggtgttgtttgcggcggttcctaaagatgttcctactttttagga 9623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1001 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold1001
Description:

Target: scaffold1001; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 122 - 166
Target Start/End: Complemental strand, 772 - 728
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgcc 166  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  772 atgttggatacgatgttccaacatcttggcacggttcagtgtgcc 728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1001; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 121
Target Start/End: Complemental strand, 863 - 822
Alignment:
Q  80 tttgggtattggcttcatttttgctaaaacaaatattcatgt 121  Q
    |||| |||||| ||||||| ||||||||||||||||||||||    
T  863 tttgagtattgtcttcattgttgctaaaacaaatattcatgt 822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 98 - 169
Target Start/End: Complemental strand, 12017 - 11943
Alignment:
Q  98 ttttgctaaaacaaatattcatgt---atgttggatacgatgttccaacatcttggcacggttcagtgtgccctg 169  Q
    ||||||||||||||||| ||| ||   |||||||| |||||||| ||||||| ||||||||||||||||||||||    
T  12017 ttttgctaaaacaaataatcaagtgtgatgttggacacgatgtttcaacatcctggcacggttcagtgtgccctg 11943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 122 - 166
Target Start/End: Complemental strand, 16315 - 16271
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgcc 166  Q
    ||||||||||||||||||||||||| |||||||||||||||||||    
T  16315 atgttggatacgatgttccaacatcctggcacggttcagtgtgcc 16271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 122 - 166
Target Start/End: Original strand, 15970 - 16014
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgcc 166  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||    
T  15970 atgttggatacgatgttccaacatcctggcacggttcggtgtgcc 16014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 122 - 166
Target Start/End: Original strand, 1717 - 1761
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgcc 166  Q
    ||||||||||||||||||||||||  |||||||||||||||||||    
T  1717 atgttggatacgatgttccaacattctggcacggttcagtgtgcc 1761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 122 - 166
Target Start/End: Original strand, 25027 - 25071
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgcc 166  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||    
T  25027 atgttggatacgatgctccaacatcctggcacggttcagtgtgcc 25071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 123 - 166
Target Start/End: Complemental strand, 9483 - 9440
Alignment:
Q  123 tgttggatacgatgttccaacatcttggcacggttcagtgtgcc 166  Q
    |||||||||| |||||||||| ||||||||||||||||||||||    
T  9483 tgttggatacaatgttccaacttcttggcacggttcagtgtgcc 9440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 122 - 166
Target Start/End: Complemental strand, 37400 - 37356
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgcc 166  Q
    ||||||||||| ||||||||||||| || ||||||||||||||||    
T  37400 atgttggatacaatgttccaacatcctgacacggttcagtgtgcc 37356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 122 - 166
Target Start/End: Original strand, 47740 - 47784
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgcc 166  Q
    ||||||||||||||  ||||||||| |||||||||||||||||||    
T  47740 atgttggatacgatactccaacatcctggcacggttcagtgtgcc 47784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 122 - 172
Target Start/End: Complemental strand, 38115 - 38065
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgccctgttt 172  Q
    ||||||||||||||||||||||||| |||||| ||| ||||| || |||||    
T  38115 atgttggatacgatgttccaacatcctggcacagttaagtgtaccttgttt 38065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0226
Description:

Target: scaffold0226; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 125 - 164
Target Start/End: Original strand, 6891 - 6931
Alignment:
Q  125 ttggatacgatgttccaacatc-ttggcacggttcagtgtg 164  Q
    ||||||| |||||||||||||| ||||||||||||||||||    
T  6891 ttggatatgatgttccaacatccttggcacggttcagtgtg 6931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 122 - 166
Target Start/End: Complemental strand, 88556 - 88512
Alignment:
Q  122 atgttggatacgatgttccaacatcttggcacggttcagtgtgcc 166  Q
    ||||||||||| ||||||||||||| || || |||||||||||||    
T  88556 atgttggatacaatgttccaacatcctgacatggttcagtgtgcc 88512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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