View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20183_low_33 (Length: 268)
Name: NF20183_low_33
Description: NF20183
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20183_low_33 |
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Alignment Details
Target: chr7 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 11 - 250
Target Start/End: Complemental strand, 46039191 - 46038952
Alignment:
| Q |
11 |
cagagaccctcacgcccaacctgaaggtataaattcatgtaccatattcaaaaaatgttgtgaaatagatttaaagataaactttggtgtcatgttatat |
110 |
Q |
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| T |
46039191 |
cagagaccctcacgcccaacctgaaggtataaattcatgtaccatattcaaaaaatgttttgaaatagatttaaagataaactttggtgtcatgttatat |
46039092 |
T |
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| Q |
111 |
tttataaaattagtgagcaggtttcttctttctctgcagcattcggtagaaattgtgaagcaggatgcttacaaagatgtgtgtaatttaaaaccagttg |
210 |
Q |
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| T |
46039091 |
tttataaaattagtgagcaggtttcttctttctctgcagcattcggtagaaattgtgaagcaggatgcttacaaagatgtgtgtaatttaaaaccagttg |
46038992 |
T |
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| Q |
211 |
atgaaacttttctgaactccataagcctagatgcatgtat |
250 |
Q |
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| T |
46038991 |
atgaaacttttctgaactccataagcctaggtgcatgtat |
46038952 |
T |
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