View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF20185_low_7 (Length: 365)
Name: NF20185_low_7
Description: NF20185
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20185_low_7 |
 | |
|
| [»] scaffold0300 (1 HSPs) |
| | |
|
| [»] scaffold0432 (1 HSPs) |
| | |
|
| [»] scaffold0032 (1 HSPs) |
| | |
|
| [»] scaffold0003 (1 HSPs) |
| | |
|
Alignment Details
Target: chr5 (Bit Score: 284; Significance: 1e-159; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 15 - 310
Target Start/End: Original strand, 26369970 - 26370265
Alignment:
| Q |
15 |
tatcatcaaaccaccgcccacctcccacaccagccccattttttatatttattaaattattccaccaaacagaattaaatcgcccatcctctgcgattat |
114 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
26369970 |
tatcatcaaaccaccgcccacctcccacaccagccccattttttatatttattaaattattccaccaaacaaaattaaatcgcccatcctctgcgattat |
26370069 |
T |
|
| Q |
115 |
acctcctacctccccatatctacctgctaaaactctataccacaaactcctattttcaacccgcatacgccaacaccatttaccaagtaatgccaagtta |
214 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26370070 |
acctcctacctccccatatttacctgctaaaactctataccacaaactcctattttcaacccgcatacgccaacaccatttaccaagtaatgccaagtta |
26370169 |
T |
|
| Q |
215 |
aactcccgaatcctctgcactcctaaacctccatcctcctttttggaacaaatagtgtcccagttaatccaagaaattttcctaacctcctcacaa |
310 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26370170 |
aactcccgaatcctccgcactcctaaacctccatcctcctttttggaacaaatagtgtcccagttaatccaagaaattttcctaacctcctcacaa |
26370265 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 11266820 - 11266879
Alignment:
| Q |
239 |
aaacctccatcctcctttttggaacaaatagtgtcccagttaatccaagaaattttccta |
298 |
Q |
| |
|
|||||||||| ||||||||| |||||||| | ||||| ||||||||||||||||||||| |
|
|
| T |
11266820 |
aaacctccattctcctttttcaaacaaatattatcccacttaatccaagaaattttccta |
11266879 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 308
Target Start/End: Complemental strand, 22113540 - 22113504
Alignment:
| Q |
272 |
tcccagttaatccaagaaattttcctaacctcctcac |
308 |
Q |
| |
|
||||| |||||||||||||||||||| |||||||||| |
|
|
| T |
22113540 |
tcccatttaatccaagaaattttcctcacctcctcac |
22113504 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 260; Significance: 1e-145; HSPs: 11)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 15 - 310
Target Start/End: Original strand, 47591490 - 47591785
Alignment:
| Q |
15 |
tatcatcaaaccaccgcccacctcccacaccagccccattttttatatttattaaattattccaccaaacagaattaaatcgcccatcctctgcgattat |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || |||||||||||||| |
|
|
| T |
47591490 |
tatcatcaaaccaccgcccacctcccacaccagccccattttttatatttattaaattattccaccaaacagaattaaattgtccctcctctgcgattat |
47591589 |
T |
|
| Q |
115 |
acctcctacctccccatatctacctgctaaaactctataccacaaactcctattttcaacccgcatacgccaacaccatttaccaagtaatgccaagtta |
214 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
47591590 |
acctcctacctccccatatctacctgctagaactctataccacaaactcctattttcaacccgcatacgccaacaccatttaccaagtaatgccaaatta |
47591689 |
T |
|
| Q |
215 |
aactcccgaatcctctgcactcctaaacctccatcctcctttttggaacaaatagtgtcccagttaatccaagaaattttcctaacctcctcacaa |
310 |
Q |
| |
|
||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
47591690 |
aactcccgaattctccgcactcctaagcctccatcctcctttttggaacaaatagtgttccagttaatccaagaaattttcctaacctcctcacaa |
47591785 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 15 - 309
Target Start/End: Complemental strand, 48639796 - 48639502
Alignment:
| Q |
15 |
tatcatcaaaccaccgcccacctcccacaccagccccattttttatatttattaaattattccaccaaacagaattaaatcgcccatcctctgcgattat |
114 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| |||||||||||||| |
|
|
| T |
48639796 |
tatcatcaaaccaccacccacctcccacaccagccccattttttatatttattaaattattccactaaacagaattaaactgcccctcctctgcgattat |
48639697 |
T |
|
| Q |
115 |
acctcctacctccccatatctacctgctaaaactctataccacaaactcctattttcaacccgcatacgccaacaccatttaccaagtaatgccaagtta |
214 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| |
|
|
| T |
48639696 |
acctcctacctccccatatctacctgctataactctataccacaaactcctattttcaacccgcatatgccaacaccatttaccaagtaatgccaaatta |
48639597 |
T |
|
| Q |
215 |
aactcccgaatcctctgcactcctaaacctccatcctcctttttggaacaaatagtgtcccagttaatccaagaaattttcctaacctcctcaca |
309 |
Q |
| |
|
||||||||||||||| |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48639596 |
aactcccgaatcctccgcactcttaagcctccatcctcctttttggaacaaatagtgtcccagttaatccaagaaattttcctaacctcctcaca |
48639502 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 15 - 310
Target Start/End: Original strand, 36652718 - 36653013
Alignment:
| Q |
15 |
tatcatcaaaccaccgcccacctcccacaccagccccattttttatatttattaaattattccaccaaacagaattaaatcgcccatcctctgcgattat |
114 |
Q |
| |
|
||||||||||||| | |||||||||||||||| |||||||||| | |||||| |||||||||||||||||||| ||||| ||||||| || || ||| | |
|
|
| T |
36652718 |
tatcatcaaaccaactcccacctcccacaccatccccatttttaacatttatcaaattattccaccaaacagagttaaaccgcccatgttcggcaatttt |
36652817 |
T |
|
| Q |
115 |
acctcctacctccccatatctacctgctaaaactctataccacaaactcctattttcaacccgcatacgccaacaccatttaccaagtaatgccaagtta |
214 |
Q |
| |
|
|||||||||||| || |||||| | ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| || |||||| |
|
|
| T |
36652818 |
acctcctacctcaccgtatctagcaaataaaactctataccacaaacttctattttcaacccgcatccgccaacaccatttaccaagtaaagctaagtta |
36652917 |
T |
|
| Q |
215 |
aactcccgaatcctctgcactcctaaacctccatcctcctttttggaacaaatagtgtcccagttaatccaagaaattttcctaacctcctcacaa |
310 |
Q |
| |
|
|| || ||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36652918 |
aattcttgaatccttcgcacacctaaacctccctcctcctttttggaacaaatagtgtcccagttaatccaagaaattttcctaacctcctcacaa |
36653013 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 15 - 310
Target Start/End: Original strand, 9897535 - 9897829
Alignment:
| Q |
15 |
tatcatcaaaccaccgcccacctcccacaccagccccattttttatatttattaaattattccaccaaacagaattaaatcgcccatcctctgcgattat |
114 |
Q |
| |
|
||||||||||||| | |||||||||||||||||||| |||||| | |||||| ||||||||||||| |||| | ||||| ||||| ||||| ||||| | |
|
|
| T |
9897535 |
tatcatcaaaccaactcccacctcccacaccagccc-atttttaacatttatcaaattattccaccgaacaaagttaaaccgcccctcctcgacgatttt |
9897633 |
T |
|
| Q |
115 |
acctcctacctccccatatctacctgctaaaactctataccacaaactcctattttcaacccgcatacgccaacaccatttaccaagtaatgccaagtta |
214 |
Q |
| |
|
||||||||||| || |||||| ||| |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| || || ||| |
|
|
| T |
9897634 |
acctcctacctatccgtatctaactgataaaactctataccacaaactcctatttacaacccgcatccgccaacaccatttaccaagtaaagctaaatta |
9897733 |
T |
|
| Q |
215 |
aactcccgaatcctctgcactcctaaacctccatcctcctttttggaacaaatagtgtcccagttaatccaagaaattttcctaacctcctcacaa |
310 |
Q |
| |
|
|| |||| |||||| |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9897734 |
aattcccaaatccttcgcactcctaaacctccctcctcgtttttggaacaaatagtgtcccagttaatccaagaaattttcctaacctcctcacaa |
9897829 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 15 - 310
Target Start/End: Original strand, 37871684 - 37871979
Alignment:
| Q |
15 |
tatcatcaaaccaccgcccacctcccacaccagccccattttttatatttattaaattattccaccaaacagaattaaatcgcccatcctctgcgattat |
114 |
Q |
| |
|
|||||||||||||| ||||||||||||| |||||||||||||| | |||||| |||||||||||||||||||| ||||| | ||| ||||| || ||| | |
|
|
| T |
37871684 |
tatcatcaaaccactgcccacctcccacgccagccccatttttaacatttatcaaattattccaccaaacagagttaaacctcccctcctcggctatttt |
37871783 |
T |
|
| Q |
115 |
acctcctacctccccatatctacctgctaaaactctataccacaaactcctattttcaacccgcatacgccaacaccatttaccaagtaatgccaagtta |
214 |
Q |
| |
|
|||||||||||| |||||||| ||| |||||||||||||||||||||| |||| ||||||||||| | ||||||||||||||||||||| ||||| ||| |
|
|
| T |
37871784 |
acctcctacctcaccatatctggctgataaaactctataccacaaactcatattctcaacccgcatccaccaacaccatttaccaagtaaagccaaatta |
37871883 |
T |
|
| Q |
215 |
aactcccgaatcctctgcactcctaaacctccatcctcctttttggaacaaatagtgtcccagttaatccaagaaattttcctaacctcctcacaa |
310 |
Q |
| |
|
|| |||| ||||||| |||||||||| || || |||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
37871884 |
aattccctaatcctccgcactcctaacccgccttcctcctttttggaacaaatagtgctccaattaatccaagaaattttcctaacctcctcacaa |
37871979 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 15 - 310
Target Start/End: Complemental strand, 43498372 - 43498077
Alignment:
| Q |
15 |
tatcatcaaaccaccgcccacctcccacaccagccccattttttatatttattaaattattccaccaaacagaattaaatcgcccatcctctgcgattat |
114 |
Q |
| |
|
||||||||| ||| | ||||||||||||||||||||||||||| | |||||| |||||||||||||||| ||| ||||| ||||||||||| | ||| | |
|
|
| T |
43498372 |
tatcatcaatccaactcccacctcccacaccagccccatttttaacatttatcaaattattccaccaaatagagttaaaccgcccatcctcgacaatttt |
43498273 |
T |
|
| Q |
115 |
acctcctacctccccatatctacctgctaaaactctataccacaaactcctattttcaacccgcatacgccaacaccatttaccaagtaatgccaagtta |
214 |
Q |
| |
|
|||||||||| | || |||||| | | |||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| || || ||| |
|
|
| T |
43498272 |
acctcctaccccaccgtatctagcagataaaacgctataccacaaacttctattttcaacccgcatccgccaacaccatttaccaagtaaagctaaatta |
43498173 |
T |
|
| Q |
215 |
aactcccgaatcctctgcactcctaaacctccatcctcctttttggaacaaatagtgtcccagttaatccaagaaattttcctaacctcctcacaa |
310 |
Q |
| |
|
|| ||| ||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43498172 |
aattcctgaatccttcgcacacctaaacctccctcctcctttttggaacaaatagtgtcccagttaatccaagaaattttcctaacctcctcacaa |
43498077 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 171; E-Value: 9e-92
Query Start/End: Original strand, 36 - 310
Target Start/End: Original strand, 39060716 - 39060990
Alignment:
| Q |
36 |
ctcccacaccagccccattttttatatttattaaattattccaccaaacagaattaaatcgcccatcctctgcgattatacctcctacctccccatatct |
135 |
Q |
| |
|
|||||||||||||||||||||| | |||||| ||||||||| |||||||||| ||||| ||||| |||| |||||| ||||| ||||||| || |||| |
|
|
| T |
39060716 |
ctcccacaccagccccatttttaacatttatcaaattattctaccaaacagagttaaaccgcccctccttggcgattttaccttctacctctccgcatct |
39060815 |
T |
|
| Q |
136 |
acctgctaaaactctataccacaaactcctattttcaacccgcatacgccaacaccatttaccaagtaatgccaagttaaactcccgaatcctctgcact |
235 |
Q |
| |
|
| ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || || ||||| ||| ||||||| |||| |
|
|
| T |
39060816 |
agctgataaaactctataccacaaactcctattttcaacccgcatccgccaacaccatttaccaagtaaagctaaattaaattcctgaatccttcccact |
39060915 |
T |
|
| Q |
236 |
cctaaacctccatcctcctttttggaacaaatagtgtcccagttaatccaagaaattttcctaacctcctcacaa |
310 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39060916 |
cctaaacctccctcctcctttttggaacaaatagtgtcccagttaatccaagaaattttcctaacctcctcacaa |
39060990 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 23108801 - 23108918
Alignment:
| Q |
15 |
tatcatcaaaccaccgcccacctcccacaccagccccattttttatatttattaaattattccaccaaacagaattaaatcgcccatcctctgcgattat |
114 |
Q |
| |
|
|||||||||||||||||| ||||||||||| |||||||||||| | |||||| ||||||||||||||| ||| ||||| | ||| ||||| | |||| | |
|
|
| T |
23108801 |
tatcatcaaaccaccgcc-acctcccacacgagccccatttttaacatttatcaaattattccaccaa--agagttaaacctcccctcctcggggatttt |
23108897 |
T |
|
| Q |
115 |
acctcctacctccccatatct |
135 |
Q |
| |
|
|||||||||||| || ||||| |
|
|
| T |
23108898 |
acctcctacctctccgtatct |
23108918 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 40346750 - 40346827
Alignment:
| Q |
18 |
catcaaaccaccgcccacctcccacaccagccccattttttatatttattaaattattccaccaaacagaattaaatc |
95 |
Q |
| |
|
||||||||||||| ||| ||||||||| ||||||||||| ||||| || |||||||||||||||||||| ||||||| |
|
|
| T |
40346750 |
catcaaaccaccgaccaattcccacaccggccccatttttaatattaatcaaattattccaccaaacagagttaaatc |
40346827 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 173 - 299
Target Start/End: Complemental strand, 6355439 - 6355313
Alignment:
| Q |
173 |
acccgcatacgccaacaccatttaccaagtaatgccaagttaaactcccgaatcctctgcactcctaaacctccatcctcctttttggaacaaatagtgt |
272 |
Q |
| |
|
|||||||| | ||| ||||||||||||||||| ||| |||||| |||| ||||||| || | | |||||||| ||||||||||||| ||||| ||| |
|
|
| T |
6355439 |
acccgcatcctccaccaccatttaccaagtaacaccatgttaaattccctaatcctcctcagcctcagacctccattctcctttttggaataaatattgt |
6355340 |
T |
|
| Q |
273 |
cccagttaatccaagaaattttcctaa |
299 |
Q |
| |
|
|||| || |||||||| |||||||||| |
|
|
| T |
6355339 |
cccaattgatccaagatattttcctaa |
6355313 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 23805588 - 23805511
Alignment:
| Q |
13 |
aatatcatcaaaccaccgcccacctcccacaccagccccattttttatatttattaaattattccaccaaacagaatt |
90 |
Q |
| |
|
|||||||||||||||||| ||| ||||| ||||| ||||| ||| |||| || ||||||||| ||||||||||||| |
|
|
| T |
23805588 |
aatatcatcaaaccaccggccaactcccgcaccaaccccacatttaatatcaatcaaattattcaaccaaacagaatt |
23805511 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 260; Significance: 1e-145; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 15 - 310
Target Start/End: Original strand, 17914137 - 17914432
Alignment:
| Q |
15 |
tatcatcaaaccaccgcccacctcccacaccagccccattttttatatttattaaattattccaccaaacagaattaaatcgcccatcctctgcgattat |
114 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||||||| |
|
|
| T |
17914137 |
tatcatcaaaccaccgcccacctcccacaccagccccattttttatatttattaaattattccaccaaacagaattaaaccgcccctcctctacgattat |
17914236 |
T |
|
| Q |
115 |
acctcctacctccccatatctacctgctaaaactctataccacaaactcctattttcaacccgcatacgccaacaccatttaccaagtaatgccaagtta |
214 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || ||| |
|
|
| T |
17914237 |
acctcctacctccccatatctacctgttaaaactctataccacaaactcctattttcaacccacatacgccaacaccatttaccaagtaatgcgaaatta |
17914336 |
T |
|
| Q |
215 |
aactcccgaatcctctgcactcctaaacctccatcctcctttttggaacaaatagtgtcccagttaatccaagaaattttcctaacctcctcacaa |
310 |
Q |
| |
|
||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17914337 |
aactcccgaatcctccgcactcctaagcctccatcctcctttttggaacaaatagtgtcccagttaatccaagaaattttcctaacctcctcacaa |
17914432 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 14 - 309
Target Start/End: Complemental strand, 15029153 - 15028858
Alignment:
| Q |
14 |
atatcatcaaaccaccgcccacctcccacaccagccccattttttatatttattaaattattccaccaaacagaattaaatcgcccatcctctgcgatta |
113 |
Q |
| |
|
||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| ||||||||||||| |
|
|
| T |
15029153 |
atatcatcaaaccactacccacctcccacatcagccccattttttatatttattaatttattccaccaaacagagttaaaccgcccctcctctgcgatta |
15029054 |
T |
|
| Q |
114 |
tacctcctacctccccatatctacctgctaaaactctataccacaaactcctattttcaacccgcatacgccaacaccatttaccaagtaatgccaagtt |
213 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| ||||| || |
|
|
| T |
15029053 |
gacctcctacctccccatatctacctgctaaaactctataccacaaactcctattttcaacccgcatatgccaacaccattcaccaagtaaagccaaatt |
15028954 |
T |
|
| Q |
214 |
aaactcccgaatcctctgcactcctaaacctccatcctcctttttggaacaaatagtgtcccagttaatccaagaaattttcctaacctcctcaca |
309 |
Q |
| |
|
|||||| |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15028953 |
aaactctcgaatcctctgcactcctaagcctccattatcctttttggaacaaatagtgtcccagttaatccaagaaattttcctaacctcctcaca |
15028858 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 9819855 - 9819914
Alignment:
| Q |
239 |
aaacctccatcctcctttttggaacaaatagtgtcccagttaatccaagaaattttccta |
298 |
Q |
| |
|
|||||||||| ||||||||| |||||||| | ||||| ||||||||||||||||||||| |
|
|
| T |
9819855 |
aaacctccattctcctttttcaaacaaatattatcccatttaatccaagaaattttccta |
9819914 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0300 (Bit Score: 196; Significance: 1e-106; HSPs: 1)
Name: scaffold0300
Description:
Target: scaffold0300; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 15 - 310
Target Start/End: Complemental strand, 8646 - 8351
Alignment:
| Q |
15 |
tatcatcaaaccaccgcccacctcccacaccagccccattttttatatttattaaattattccaccaaacagaattaaatcgcccatcctctgcgattat |
114 |
Q |
| |
|
||||||||||||| | ||||||||||||||||||||||||||| | |||||| |||||||||||||||||||| ||||| ||||||||||| || ||| | |
|
|
| T |
8646 |
tatcatcaaaccaactcccacctcccacaccagccccatttttaacatttatcaaattattccaccaaacagagttaaaccgcccatcctcggcaatttt |
8547 |
T |
|
| Q |
115 |
acctcctacctccccatatctacctgctaaaactctataccacaaactcctattttcaacccgcatacgccaacaccatttaccaagtaatgccaagtta |
214 |
Q |
| |
|
|| ||||||||| ||||||||| | | ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||| ||| |
|
|
| T |
8546 |
acatcctacctcaccatatctagcagataaaactctataccacaaacttctattttcaacccgcatccgccaacaccatttaccaagtaaagccaaatta |
8447 |
T |
|
| Q |
215 |
aactcccgaatcctctgcactcctaaacctccatcctcctttttggaacaaatagtgtcccagttaatccaagaaattttcctaacctcctcacaa |
310 |
Q |
| |
|
|| ||||||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
8446 |
aattcccgaatccttcgcacacctaaacctccctcctcctttttggaacaaatagtgtcccagttaatccaagaaattttcctaaccttctcacaa |
8351 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 188; Significance: 1e-102; HSPs: 5)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 15 - 310
Target Start/End: Original strand, 8445284 - 8445579
Alignment:
| Q |
15 |
tatcatcaaaccaccgcccacctcccacaccagccccattttttatatttattaaattattccaccaaacagaattaaatcgcccatcctctgcgattat |
114 |
Q |
| |
|
||||||||||||| | ||||||||||||||||||| ||||||| | |||||| |||||||||||||||||||||||||| ||| ||||||| || ||| | |
|
|
| T |
8445284 |
tatcatcaaaccaactcccacctcccacaccagcctcatttttaacatttatcaaattattccaccaaacagaattaaaccgctcatcctcggcaatttt |
8445383 |
T |
|
| Q |
115 |
acctcctacctccccatatctacctgctaaaactctataccacaaactcctattttcaacccgcatacgccaacaccatttaccaagtaatgccaagtta |
214 |
Q |
| |
|
|||||||||||| | ||||||| | | |||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||| ||| |
|
|
| T |
8445384 |
acctcctacctcactatatctagcagataaaacgctataccacaaacttctattttcaacccgcatccgccaacaccatttaccaagtaaagccaaatta |
8445483 |
T |
|
| Q |
215 |
aactcccgaatcctctgcactcctaaacctccatcctcctttttggaacaaatagtgtcccagttaatccaagaaattttcctaacctcctcacaa |
310 |
Q |
| |
|
|| ||||||||||| |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8445484 |
aattcccgaatccttcgcacacctaaacctctctcctcctttttggaacaaatagtgtcccagttaatccaagaaattttcctaacctcctcacaa |
8445579 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 15 - 310
Target Start/End: Original strand, 13090812 - 13091107
Alignment:
| Q |
15 |
tatcatcaaaccaccgcccacctcccacaccagccccattttttatatttattaaattattccaccaaacagaattaaatcgcccatcctctgcgattat |
114 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| | |||||| |||||||||||||||||||| ||||| | ||| ||||| || ||| | |
|
|
| T |
13090812 |
tatcatcaaaccaccgcccacctcccacaccagccccatttttaacatttatcaaattattccaccaaacagagttaaacctcccctcctcggctatttt |
13090911 |
T |
|
| Q |
115 |
acctcctacctccccatatctacctgctaaaactctataccacaaactcctattttcaacccgcatacgccaacaccatttaccaagtaatgccaagtta |
214 |
Q |
| |
|
|||||||||||| |||||||| ||| |||||||||||||||||||||| |||| ||||||||||| |||||| |||||||| ||||||| ||||| ||| |
|
|
| T |
13090912 |
acctcctacctcaccatatctggctgataaaactctataccacaaactcatattctcaacccgcatccgccaataccatttatcaagtaaagccaaatta |
13091011 |
T |
|
| Q |
215 |
aactcccgaatcctctgcactcctaaacctccatcctcctttttggaacaaatagtgtcccagttaatccaagaaattttcctaacctcctcacaa |
310 |
Q |
| |
|
|| | || ||||||| |||||||||| || || |||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
13091012 |
aatttcctaatcctccgcactcctaacccgccttcctcctttttggaacaaatagtgctccaattaatccaagaaatttttctaacctcctcacaa |
13091107 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 91 - 309
Target Start/End: Original strand, 5456767 - 5456985
Alignment:
| Q |
91 |
aaatcgcccatcctctgcgattatacctcctacctccccatatctacctgctaaaactctataccacaaactcctattttcaacccgcatacgccaacac |
190 |
Q |
| |
|
||||||||| ||||| ||||||| |||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| || | ||||||| |
|
|
| T |
5456767 |
aaatcgcccctcctcatcgattattcctcctacctccccgtatcgtgatgctaaaactctataccacaaactcctattttcaaccataatcctccaacac |
5456866 |
T |
|
| Q |
191 |
catttaccaagtaatgccaagttaaactcccgaatcctctgcactcctaaacctccatcctcctttttggaacaaatagtgtcccagttaatccaagaaa |
290 |
Q |
| |
|
|||||| || |||| ||||| |||||||||| |||||| |||| || ||||||| | ||| ||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
5456867 |
catttaacacgtaacgccaaattaaactcccttatcctccgcacccccaaacctctgttctcttttttggaacaaataatgtcccagttaatccaagaaa |
5456966 |
T |
|
| Q |
291 |
ttttcctaacctcctcaca |
309 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
5456967 |
ttttcctaacctcctcaca |
5456985 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 263 - 304
Target Start/End: Original strand, 5457046 - 5457087
Alignment:
| Q |
263 |
caaatagtgtcccagttaatccaagaaattttcctaacctcc |
304 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
5457046 |
caaataatgtcccagttaatccaagaaattttcctaacctcc |
5457087 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 299
Target Start/End: Complemental strand, 15728303 - 15728259
Alignment:
| Q |
255 |
ttttggaacaaatagtgtcccagttaatccaagaaattttcctaa |
299 |
Q |
| |
|
|||||||||||||||||| ||| |||||||||| |||||||||| |
|
|
| T |
15728303 |
ttttggaacaaatagtgttccaattaatccaagctattttcctaa |
15728259 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 177; Significance: 2e-95; HSPs: 5)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 18 - 310
Target Start/End: Complemental strand, 27270720 - 27270428
Alignment:
| Q |
18 |
catcaaaccaccgcccacctcccacaccagccccattttttatatttattaaattattccaccaaacagaattaaatcgcccatcctctgcgattatacc |
117 |
Q |
| |
|
|||||||||| | |||||||||||||||||| |||||||| | |||||| |||||||||||||||||||| ||||| ||| |||||| |||||| |||| |
|
|
| T |
27270720 |
catcaaaccaactcccacctcccacaccagctccatttttaacatttatcaaattattccaccaaacagagttaaactgccgatcctcggcgattttacc |
27270621 |
T |
|
| Q |
118 |
tcctacctccccatatctacctgctaaaactctataccacaaactcctattttcaacccgcatacgccaacaccatttaccaagtaatgccaagttaaac |
217 |
Q |
| |
|
||||||||| || |||||| ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||| |
|
|
| T |
27270620 |
tcctacctcaccgtatctagctgataaaactctataccacaaactcctattttcaacccgcatccgccaacaccatttaccaagtaaagccaaattaaat |
27270521 |
T |
|
| Q |
218 |
tcccgaatcctctgcactcctaaacctccatcctcctttttggaacaaatagtgtcccagttaatccaagaaattttcctaacctcctcacaa |
310 |
Q |
| |
|
||| | ||||| |||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||| |
|
|
| T |
27270520 |
tcctggatccttcgcacacctaaacctccttcctcctttttggaacaaatagtgtcccaattaatccaataaattttcccaacctcctcacaa |
27270428 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 239 - 299
Target Start/End: Complemental strand, 23479924 - 23479864
Alignment:
| Q |
239 |
aaacctccatcctcctttttggaacaaatagtgtcccagttaatccaagaaattttcctaa |
299 |
Q |
| |
|
||||| |||| ||||||||| ||||||||| ||||||| ||||||||||| |||||||||| |
|
|
| T |
23479924 |
aaaccaccattctcctttttagaacaaatattgtcccaattaatccaagatattttcctaa |
23479864 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 23480147 - 23480079
Alignment:
| Q |
16 |
atcatcaaaccaccgcccacctcccacaccagccccattttttatatttattaaattattccaccaaac |
84 |
Q |
| |
|
||||||||||||||| ||| ||||||||| ||| ||| |||| ||||| || ||||||||||||||||| |
|
|
| T |
23480147 |
atcatcaaaccaccgaccaactcccacactagctccacttttaatattaatcaaattattccaccaaac |
23480079 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 191 - 294
Target Start/End: Original strand, 27501019 - 27501122
Alignment:
| Q |
191 |
catttaccaagtaatgccaagttaaactcccgaatcctctgcactcctaaacctccatcctcctttttggaacaaatagtgtcccagttaatccaagaaa |
290 |
Q |
| |
|
|||||||||||||| ||||| ||||| || | |||||||||||| | ||||| |||| || | ||| ||||||||||||||||| |||||||| || | |
|
|
| T |
27501019 |
catttaccaagtaaagccaaattaaattctctaatcctctgcacccacaaaccgccattctaatatttagaacaaatagtgtcccaattaatccatgata |
27501118 |
T |
|
| Q |
291 |
tttt |
294 |
Q |
| |
|
|||| |
|
|
| T |
27501119 |
tttt |
27501122 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 143 - 204
Target Start/End: Complemental strand, 26624672 - 26624611
Alignment:
| Q |
143 |
aaaactctataccacaaactcctattttcaacccgcatacgccaacaccatttaccaagtaa |
204 |
Q |
| |
|
||||||||||||||||||||||||| || ||| |||| | ||| ||||||||||||||||| |
|
|
| T |
26624672 |
aaaactctataccacaaactcctatcatccacctgcatcctccaccaccatttaccaagtaa |
26624611 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 168; Significance: 6e-90; HSPs: 10)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 18 - 309
Target Start/End: Complemental strand, 38141305 - 38141014
Alignment:
| Q |
18 |
catcaaaccaccgcccacctcccacaccagccccattttttatatttattaaattattccaccaaacagaattaaatcgcccatcctctgcgattatacc |
117 |
Q |
| |
|
||||||||||||| ||| ||||||||||||||||||||| ||||| || |||||||||||||||||||| ||||||||||| ||||| ||||||| || |
|
|
| T |
38141305 |
catcaaaccaccgaccaattcccacaccagccccatttttaatattaatcaaattattccaccaaacagagttaaatcgcccctcctcatcgattattcc |
38141206 |
T |
|
| Q |
118 |
tcctacctccccatatctacctgctaaaactctataccacaaactcctattttcaacccgcatacgccaacaccatttaccaagtaatgccaagttaaac |
217 |
Q |
| |
|
|||||||||||| |||| |||||||||||||||||||||||||||||||||||||| || | ||||||||||||| ||||||| ||||| |||||| |
|
|
| T |
38141205 |
tcctacctccccgtatcgtgatgctaaaactctataccacaaactcctattttcaaccctaatcctccaacaccatttaacaagtaacgccaaattaaac |
38141106 |
T |
|
| Q |
218 |
tcccgaatcctctgcactcctaaacctccatcctcctttttggaacaaatagtgtcccagttaatccaagaaattttcctaacctcctcaca |
309 |
Q |
| |
|
|||| |||||| |||| || ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38141105 |
tcccttatcctccgcacccccaaacctctgttctcctttttggaacaaatagtgtcccagttaatccaagaaattttcctaacctcctcaca |
38141014 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 18 - 309
Target Start/End: Complemental strand, 5554825 - 5554534
Alignment:
| Q |
18 |
catcaaaccaccgcccacctcccacaccagccccattttttatatttattaaattattccaccaaacagaattaaatcgcccatcctctgcgattatacc |
117 |
Q |
| |
|
||||||||||||| |||| ||||||||||||||||||||| ||||| || |||||||||||||||||||| ||||||||||| ||||| ||||||| || |
|
|
| T |
5554825 |
catcaaaccaccgaccacttcccacaccagccccatttttaatattaatcaaattattccaccaaacagagttaaatcgcccctcctcatcgattattcc |
5554726 |
T |
|
| Q |
118 |
tcctacctccccatatctacctgctaaaactctataccacaaactcctattttcaacccgcatacgccaacaccatttaccaagtaatgccaagttaaac |
217 |
Q |
| |
|
||||||||||| |||| ||||||||||||||||| |||||||||||||||||||| || | ||||||||||||| ||||||| ||||| |||||| |
|
|
| T |
5554725 |
tcctacctccctgtatcgtgatgctaaaactctataccgcaaactcctattttcaaccctaatcctccaacaccatttaacaagtaacgccaaattaaac |
5554626 |
T |
|
| Q |
218 |
tcccgaatcctctgcactcctaaacctccatcctcctttttggaacaaatagtgtcccagttaatccaagaaattttcctaacctcctcaca |
309 |
Q |
| |
|
|||| |||||| |||| || |||||||| | ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5554625 |
tcccttatcctccgcacccccaaacctccgttctcttttttggaacaaatagtgtcccagttaatccaagaaattttcctaacctcctcaca |
5554534 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 18 - 309
Target Start/End: Complemental strand, 19323286 - 19322995
Alignment:
| Q |
18 |
catcaaaccaccgcccacctcccacaccagccccattttttatatttattaaattattccaccaaacagaattaaatcgcccatcctctgcgattatacc |
117 |
Q |
| |
|
|||||||||||| |||| ||||||||||||||||||||| ||||| || |||||||||||||||||||| |||||||| || ||||| ||||||| || |
|
|
| T |
19323286 |
catcaaaccaccaaccacttcccacaccagccccatttttaatattaatcaaattattccaccaaacagagttaaatcgtccctcctcatcgattattcc |
19323187 |
T |
|
| Q |
118 |
tcctacctccccatatctacctgctaaaactctataccacaaactcctattttcaacccgcatacgccaacaccatttaccaagtaatgccaagttaaac |
217 |
Q |
| |
|
|||||||||||| |||| ||| |||||||||||||||||||||||||||||||||| || | ||||||||||||| ||||||| ||||| |||||| |
|
|
| T |
19323186 |
tcctacctccccgtatcgtgatgcgaaaactctataccacaaactcctattttcaaccctaatcctccaacaccatttaacaagtaacgccaaattaaac |
19323087 |
T |
|
| Q |
218 |
tcccgaatcctctgcactcctaaacctccatcctcctttttggaacaaatagtgtcccagttaatccaagaaattttcctaacctcctcaca |
309 |
Q |
| |
|
|||| |||||| | || || |||||||| | ||| ||||||||||||||||||||| ||||||||||| ||| |||||||||||||||||| |
|
|
| T |
19323086 |
tcccttatcctccgaacccccaaacctccgttctcttttttggaacaaatagtgtcctagttaatccaaaaaaatttcctaacctcctcaca |
19322995 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 32 - 310
Target Start/End: Original strand, 17194914 - 17195194
Alignment:
| Q |
32 |
ccacctcccacaccagccccattttttatatttattaaattattccaccaaacagaattaaatcgcccatcctctgcgattatacctccta--cctcccc |
129 |
Q |
| |
|
||||||||||||||||||||||||| | |||||| |||||||||||||||||||| ||||| | ||| ||||| || ||| | ||||||| |||| | |
|
|
| T |
17194914 |
ccacctcccacaccagccccattttgaacatttatcaaattattccaccaaacagagttaaacctcccctcctcagcaattttccctcctatacctcgct |
17195013 |
T |
|
| Q |
130 |
atatctacctgctaaaactctataccacaaactcctattttcaacccgcatacgccaacaccatttaccaagtaatgccaagttaaactcccgaatcctc |
229 |
Q |
| |
|
||||| || ||||||||||||||||||||||||||| ||||||||||| |||||| ||||||||||||||| ||||| ||||| |||| ||||||| |
|
|
| T |
17195014 |
gtatctggctaataaaactctataccacaaactcctattctcaacccgcattcgccaaatccatttaccaagtaaagccaaattaaattccctaatcctc |
17195113 |
T |
|
| Q |
230 |
tgcactcctaaacctccatcctcctttttggaacaaatagtgtcccagttaatccaagaaattttcctaacctcctcacaa |
310 |
Q |
| |
|
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||||||| |
|
|
| T |
17195114 |
cgcactcctaaaccgccttcctcctttttggaacaaatagtgtcccagttaatccaagaattttttcaaacctcctcacaa |
17195194 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 15 - 156
Target Start/End: Original strand, 25289623 - 25289763
Alignment:
| Q |
15 |
tatcatcaaaccaccgcccacctcccacaccagccccattttttatatttattaaattattccaccaaacagaattaaatcgcccatcctctgcgattat |
114 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||| |||||||| || |||||||||||||| |
|
|
| T |
25289623 |
tatcatcaaaccaccacccacctcccacaccagccccatttt-tatatttaataaattattccactaaacagagttaaatcgtccctcctctgcgattat |
25289721 |
T |
|
| Q |
115 |
acctcctacctccccatatctacctgctaaaactctatacca |
156 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25289722 |
acctcctacctccccatatctacctgctaaaactctatacca |
25289763 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 18 - 221
Target Start/End: Original strand, 29126891 - 29127094
Alignment:
| Q |
18 |
catcaaaccaccgcccacctcccacaccagccccattttttatatttattaaattattccaccaaacagaattaaatcgcccatcctctgcgattatacc |
117 |
Q |
| |
|
||||||||||||| |||| ||||||||||||| ||||||| ||||| || |||||||||||||||||||| |||||| |||| ||||| ||||||| || |
|
|
| T |
29126891 |
catcaaaccaccgaccacttcccacaccagcctcatttttaatattaatcaaattattccaccaaacagagttaaattgcccctcctcatcgattattcc |
29126990 |
T |
|
| Q |
118 |
tcctacctccccatatctacctgctaaaactctataccacaaactcctattttcaacccgcatacgccaacaccatttaccaagtaatgccaagttaaac |
217 |
Q |
| |
|
|||||||||||| |||| ||||||||||||||||||||||||| |||||||||||| || | ||||||||||||| ||||||| ||||| |||||| |
|
|
| T |
29126991 |
tcctacctccccgtatcgtgatgctaaaactctataccacaaactcttattttcaaccctaatcctccaacaccatttaacaagtaacgccaaattaaac |
29127090 |
T |
|
| Q |
218 |
tccc |
221 |
Q |
| |
|
|||| |
|
|
| T |
29127091 |
tccc |
29127094 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 15 - 149
Target Start/End: Original strand, 40859058 - 40859192
Alignment:
| Q |
15 |
tatcatcaaaccaccgcccacctcccacaccagccccattttttatatttattaaattattccaccaaacagaattaaatcgcccatcctctgcgattat |
114 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| || || |||||||||||||| |
|
|
| T |
40859058 |
tatcatcaaaccaccgtccacctcccacaccagcaccattttttatatttattaaattatttcaccaaacagaattaaaccgtccctcctctgcgattat |
40859157 |
T |
|
| Q |
115 |
acctcctacctccccatatctacctgctaaaactc |
149 |
Q |
| |
|
|||||||||||||||||||||||||| || ||||| |
|
|
| T |
40859158 |
acctcctacctccccatatctacctgatagaactc |
40859192 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 113 - 308
Target Start/End: Complemental strand, 19293695 - 19293500
Alignment:
| Q |
113 |
atacctcctacctccccatatctacctgctaaaactctataccacaaactcctattttcaacccgcatacgccaacaccatttaccaagtaatgccaagt |
212 |
Q |
| |
|
|||||||| ||||||||||| ||| ||||||| ||| ||||||||||||| || |||||||||| ||| | |||||||||||| |||| | | |||| |
|
|
| T |
19293695 |
atacctcccacctccccatacctagctgctaagactttataccacaaactactcttttcaaccctcatcctccaacaccatttggcaagaagcactaagt |
19293596 |
T |
|
| Q |
213 |
taaactcccgaatcctctgcactcctaaacctccatcctcctttttggaacaaatagtgtcccagttaatccaagaaattttcctaacctcctcac |
308 |
Q |
| |
|
|||| || | ||||||| |||| || |||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
19293595 |
taaattctctaatcctccgcacccccaaacctccattctcctttttggaacaaacagtgtcccagttaatccaagatattttcctaacctcctcac |
19293500 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 74 - 285
Target Start/End: Original strand, 41768662 - 41768874
Alignment:
| Q |
74 |
ttccaccaaacagaattaaatcgcccatcctctgcgattatacctcctacctccccatatctacctgctaaaactctataccacaaactcctattttcaa |
173 |
Q |
| |
|
|||||||| ||| ||||||| | || ||||| || || |||||||| ||||||||||| ||| ||||||| ||| |||||||||||| || ||||||| |
|
|
| T |
41768662 |
ttccaccagacataattaaaccttccctcctcggcaataatacctcccacctccccatacctagctgctaagacttaataccacaaactactcttttcaa |
41768761 |
T |
|
| Q |
174 |
cccgcatacgccaacaccatttaccaagtaatgccaagttaaactcccgaatcctctgca-ctcctaaacctccatcctcctttttggaacaaatagtgt |
272 |
Q |
| |
|
| | ||| | |||||||||||| ||| | | || ||||| ||| ||||||| ||| | || |||||||||| ||||||||||||||||| ||||| |
|
|
| T |
41768762 |
ctcccatcctccaacaccatttgtgaagaagcgttaaattaaattccttaatcctccgcaccccccaaacctccattctcctttttggaacaaacagtgt |
41768861 |
T |
|
| Q |
273 |
cccagttaatcca |
285 |
Q |
| |
|
|| |||||||||| |
|
|
| T |
41768862 |
cctagttaatcca |
41768874 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 4959829 - 4959865
Alignment:
| Q |
184 |
ccaacaccatttaccaagtaatgccaagttaaactcc |
220 |
Q |
| |
|
||||||||||||| ||||||||| ||||||||||||| |
|
|
| T |
4959829 |
ccaacaccatttatcaagtaatgacaagttaaactcc |
4959865 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 164; Significance: 1e-87; HSPs: 9)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 15 - 310
Target Start/End: Original strand, 12913285 - 12913580
Alignment:
| Q |
15 |
tatcatcaaaccaccgcccacctcccacaccagccccattttttatatttattaaattattccaccaaacagaattaaatcgcccatcctctgcgattat |
114 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||| | |||||| |||||||||||||||||||| ||||| | || ||||| || ||| | |
|
|
| T |
12913285 |
tatcatcagaccaccgcccacctcccacaccagccccatttttaacatttatcaaattattccaccaaacagagttaaaccttccctcctcggctatttt |
12913384 |
T |
|
| Q |
115 |
acctcctacctccccatatctacctgctaaaactctataccacaaactcctattttcaacccgcatacgccaacaccatttaccaagtaatgccaagtta |
214 |
Q |
| |
|
|||||||||||| |||||| | ||| |||||||||||||||||||||| |||| |||||||||| ||||||||||||||||||||||| ||||| ||| |
|
|
| T |
12913385 |
acctcctacctcaccatatttggctgataaaactctataccacaaactcatattctcaacccgcagccgccaacaccatttaccaagtaaagccaaatta |
12913484 |
T |
|
| Q |
215 |
aactcccgaatcctctgcactcctaaacctccatcctcctttttggaacaaatagtgtcccagttaatccaagaaattttcctaacctcctcacaa |
310 |
Q |
| |
|
|| |||| ||||||| |||||||||| || || ||||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
12913485 |
aattccctaatcctccgcactcctaacccgccttcctccttttttgaacaaatagtgctccaattaatccaagaaattttcctaacctcctcacaa |
12913580 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 18 - 276
Target Start/End: Complemental strand, 7092988 - 7092731
Alignment:
| Q |
18 |
catcaaaccaccgcccacctcccacaccagccccattttttatatttattaaattattccaccaaacagaattaaatcgcccatcctctgcgattatacc |
117 |
Q |
| |
|
||||||||||||| ||| ||||||||||||||||||||| ||||| || |||||||||||||||||||| ||||||||||| ||||| ||||||| || |
|
|
| T |
7092988 |
catcaaaccaccgaccaattcccacaccagccccatttttaatattaatcaaattattccaccaaacagagttaaatcgccc-tcctcatcgattattcc |
7092890 |
T |
|
| Q |
118 |
tcctacctccccatatctacctgctaaaactctataccacaaactcctattttcaacccgcatacgccaacaccatttaccaagtaatgccaagttaaac |
217 |
Q |
| |
|
|||||||||||| |||| |||||||||||||||||||||||||||||||||||||| || | ||||||||||||| ||||||| ||||| |||||| |
|
|
| T |
7092889 |
tcctacctccccgtatcgtgatgctaaaactctataccacaaactcctattttcaaccctaatcctccaacaccatttaacaagtaacgccaaattaaac |
7092790 |
T |
|
| Q |
218 |
tcccgaatcctctgcactcctaaacctccatcctcctttttggaacaaatagtgtccca |
276 |
Q |
| |
|
|||| |||||| |||| || |||||||| | ||| ||||||||||||||||||||||| |
|
|
| T |
7092789 |
tcccttatcctccgcacccccaaacctccgttctcttttttggaacaaatagtgtccca |
7092731 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 74 - 309
Target Start/End: Original strand, 8754013 - 8754240
Alignment:
| Q |
74 |
ttccaccaaacagaattaaatcgcccatcctctgcgattatacctcctacctccccatatctacctgctaaaactctataccacaaactcctattttcaa |
173 |
Q |
| |
|
|||||||| ||||||||||| | || ||||| || || |||||||| ||||||||||| ||| ||||||| ||| ||||||||||||| || ||||||| |
|
|
| T |
8754013 |
ttccaccagacagaattaaaccttccctcctcagcaataatacctcccacctccccatacctagctgctaagactttataccacaaactactcttttcaa |
8754112 |
T |
|
| Q |
174 |
cccgcatacgccaacaccatttaccaagtaatgccaagttaaactcccgaatcctctgcactcctaaacctccatcctcctttttggaacaaatagtgtc |
273 |
Q |
| |
|
||| ||| | |||||||||||| ||||||| || | ||||| |||| ||||||| || ||| |||| ||||||||||||||||| ||||| |
|
|
| T |
8754113 |
ccctcatcctccaacaccattttccaagtagcgctagattaaattccctaatcctccgc--------acccccattctcctttttggaacaaaaggtgtc |
8754204 |
T |
|
| Q |
274 |
ccagttaatccaagaaattttcctaacctcctcaca |
309 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
8754205 |
ccagttaatccaagaaattttcctaacctcctcaca |
8754240 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 15 - 86
Target Start/End: Original strand, 14168173 - 14168244
Alignment:
| Q |
15 |
tatcatcaaaccaccgcccacctcccacaccagccccattttttatatttattaaattattccaccaaacag |
86 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||||||||||||||| |
|
|
| T |
14168173 |
tatcatcaaaccaccgcccacctcccacaccagccccatttttaacatttatcaaattattccaccaaacag |
14168244 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 184 - 286
Target Start/End: Complemental strand, 12249646 - 12249544
Alignment:
| Q |
184 |
ccaacaccatttaccaagtaatgccaagttaaactcccgaatcctctgcactcctaaacctccatcctcctttttggaacaaatagtgtcccagttaatc |
283 |
Q |
| |
|
|||||||||||| ||||||| | |||||||||||||| || |||| || || | ||||||||| ||||||||| ||||||||||||||| |||||| |
|
|
| T |
12249646 |
ccaacaccatttgtcaagtaaagacaagttaaactccctaaccctcctgacccccatacctccatcatcctttttgagacaaatagtgtcccaattaatc |
12249547 |
T |
|
| Q |
284 |
caa |
286 |
Q |
| |
|
||| |
|
|
| T |
12249546 |
caa |
12249544 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 2894998 - 2895057
Alignment:
| Q |
239 |
aaacctccatcctcctttttggaacaaatagtgtcccagttaatccaagaaattttccta |
298 |
Q |
| |
|
|||||||||| ||||||||| |||||||| | ||||| ||||||||||||||||||||| |
|
|
| T |
2894998 |
aaacctccattctcctttttcaaacaaatattatcccatttaatccaagaaattttccta |
2895057 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 6875605 - 6875546
Alignment:
| Q |
239 |
aaacctccatcctcctttttggaacaaatagtgtcccagttaatccaagaaattttccta |
298 |
Q |
| |
|
|||||||||| ||||||||| ||||||||||| ||||| ||| ||| ||||||||||||| |
|
|
| T |
6875605 |
aaacctccattctcctttttagaacaaatagtttcccaattactcctagaaattttccta |
6875546 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 299
Target Start/End: Complemental strand, 7217774 - 7217717
Alignment:
| Q |
242 |
cctccatcctcctttttggaacaaatagtgtcccagttaatccaagaaattttcctaa |
299 |
Q |
| |
|
||||||| |||||| || |||||||||| ||||| |||||||||||||||||||||| |
|
|
| T |
7217774 |
cctccattctccttattcaaacaaatagtatcccatttaatccaagaaattttcctaa |
7217717 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 308
Target Start/End: Complemental strand, 28604317 - 28604248
Alignment:
| Q |
239 |
aaacctccatcctcctttttggaacaaatagtgtcccagttaatccaagaaattttcctaacctcctcac |
308 |
Q |
| |
|
|||||||||| ||||||||| |||||||| | || || ||||||||||||| |||||||| ||||||| |
|
|
| T |
28604317 |
aaacctccattctcctttttcaaacaaatattatctcatttaatccaagaaagtttcctaaaatcctcac |
28604248 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 160; Significance: 3e-85; HSPs: 8)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 15 - 310
Target Start/End: Complemental strand, 34548431 - 34548136
Alignment:
| Q |
15 |
tatcatcaaaccaccgcccacctcccacaccagccccattttttatatttattaaattattccaccaaacagaattaaatcgcccatcctctgcgattat |
114 |
Q |
| |
|
|||||||| |||| | | ||||||||||||||||||||||||| | |||||| |||||||||||||||||||| ||||| | || ||||| || ||| | |
|
|
| T |
34548431 |
tatcatcataccatctctcacctcccacaccagccccatttttaacatttatcaaattattccaccaaacagagttaaaccttccctcctcggctatttt |
34548332 |
T |
|
| Q |
115 |
acctcctacctccccatatctacctgctaaaactctataccacaaactcctattttcaacccgcatacgccaacaccatttaccaagtaatgccaagtta |
214 |
Q |
| |
|
|||||||||||| |||||||| ||| |||||||||||||||||||||| |||| ||||||||||| ||||| ||||||||||||||||| ||||| ||| |
|
|
| T |
34548331 |
acctcctacctcaccatatctggctgataaaactctataccacaaactcatattctcaacccgcatccgccagcaccatttaccaagtaaagccaaatta |
34548232 |
T |
|
| Q |
215 |
aactcccgaatcctctgcactcctaaacctccatcctcctttttggaacaaatagtgtcccagttaatccaagaaattttcctaacctcctcacaa |
310 |
Q |
| |
|
|| |||| |||||||||||||||||| || || ||||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
34548231 |
aattccctaatcctctgcactcctaacccgccttcctccttttttgaacaaatagtgctccaattaatccaagaaattttcctaacctcctcacaa |
34548136 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 15 - 309
Target Start/End: Original strand, 31912590 - 31912884
Alignment:
| Q |
15 |
tatcatcaaaccaccgcccacctcccacaccagccccattttttatatttattaaattattccaccaaacagaattaaatcgcccatcctctgcgattat |
114 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||| | || |||||||||||| | |
|
|
| T |
31912590 |
tatcgtcaaaccaccgcccacctcccacaccagccccattttttatatttatcaaattattacaccaaacagagttaaaccaccactcctctgcgatttt |
31912689 |
T |
|
| Q |
115 |
acctcctacctccccatatctacctgctaaaactctataccacaaactcctattttcaacccgcatacgccaacaccatttaccaagtaatgccaagtta |
214 |
Q |
| |
|
|||||||||||| || |||||| |||||||||||||||||||||||||||| |||| ||| ||||| | ||||||| |||||||| |||| |||| ||| |
|
|
| T |
31912690 |
acctcctacctcgccgtatctagctgctaaaactctataccacaaactcctcttttgaactcgcatccaccaacactatttaccatgtaaatccaaatta |
31912789 |
T |
|
| Q |
215 |
aactcccgaatcctctgcactcctaaacctccatcctcctttttggaacaaatagtgtcccagttaatccaagaaattttcctaacctcctcaca |
309 |
Q |
| |
|
|| ||| ||||||| |||||||||| || |||| || |||||||||||||||||||| || ||||||||||||||||| |||||||||||||| |
|
|
| T |
31912790 |
aattcctgaatccttcgcactcctaatccgccattcttatttttggaacaaatagtgtctcaattaatccaagaaatttttctaacctcctcaca |
31912884 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 15 - 151
Target Start/End: Complemental strand, 26675964 - 26675828
Alignment:
| Q |
15 |
tatcatcaaaccaccgcccacctcccacaccagccccattttttatatttattaaattattccaccaaacagaattaaatcgcccatcctctgcgattat |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |
|
|
| T |
26675964 |
tatcatcaaaccaccgcccacctcccacaccaaccccattttttatatttattaaattattccaccaaacagaattaaaccgcccctcctctgcgattat |
26675865 |
T |
|
| Q |
115 |
acctcctacctccccatatctacctgctaaaactcta |
151 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
26675864 |
acctcctacctccccatatctacctgctagaactcta |
26675828 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 113 - 308
Target Start/End: Complemental strand, 11468427 - 11468232
Alignment:
| Q |
113 |
atacctcctacctccccatatctacctgctaaaactctataccacaaactcctattttcaacccgcatacgccaacaccatttaccaagtaatgccaagt |
212 |
Q |
| |
|
|||||||| ||||||||||| | | ||||||| ||| ||||||||||||| || |||||| ||| ||| |||||||||||| ||||| | || |||| |
|
|
| T |
11468427 |
atacctcccacctccccatacccagctgctaagactttataccacaaacttctcttttcagccctcatcttccaacaccatttgccaagaagcgctaagt |
11468328 |
T |
|
| Q |
213 |
taaactcccgaatcctctgcactcctaaacctccatcctcctttttggaacaaatagtgtcccagttaatccaagaaattttcctaacctcctcac |
308 |
Q |
| |
|
|||| |||| ||||||| |||| ||||||||||||| |||||||| |||||||| |||||||||||||||||| ||| ||||||||||| |||| |
|
|
| T |
11468327 |
taaattcccaaatcctccgcacccctaaacctccattctccttttaggaacaaacggtgtcccagttaatccaaaaaaaattcctaacctcttcac |
11468232 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 91
Target Start/End: Complemental strand, 51372623 - 51372570
Alignment:
| Q |
38 |
cccacaccagccccattttttatatttattaaattattccaccaaacagaatta |
91 |
Q |
| |
|
|||||||||| ||||| ||| ||| ||||||||||||||||||||||||||| |
|
|
| T |
51372623 |
cccacaccagtcccatctttgataccaattaaattattccaccaaacagaatta |
51372570 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 299
Target Start/End: Original strand, 3357811 - 3357847
Alignment:
| Q |
263 |
caaatagtgtcccagttaatccaagaaattttcctaa |
299 |
Q |
| |
|
|||||||||||||| ||||||| |||||||||||||| |
|
|
| T |
3357811 |
caaatagtgtcccatttaatccgagaaattttcctaa |
3357847 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 299
Target Start/End: Original strand, 27030747 - 27030807
Alignment:
| Q |
239 |
aaacctccatcctcctttttggaacaaatagtgtcccagttaatccaagaaattttcctaa |
299 |
Q |
| |
|
|||||||||| |||||| || |||||||| | ||||| |||||| ||||||||||||||| |
|
|
| T |
27030747 |
aaacctccattctccttattcaaacaaatattatcccatttaatctaagaaattttcctaa |
27030807 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 260 - 308
Target Start/End: Complemental strand, 36015482 - 36015434
Alignment:
| Q |
260 |
gaacaaatagtgtcccagttaatccaagaaattttcctaacctcctcac |
308 |
Q |
| |
|
||||||||||| |||||||| |||||| ||||||| ||||| ||||||| |
|
|
| T |
36015482 |
gaacaaatagtatcccagtttatccaataaatttttctaacttcctcac |
36015434 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0432 (Bit Score: 152; Significance: 2e-80; HSPs: 1)
Name: scaffold0432
Description:
Target: scaffold0432; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 18 - 309
Target Start/End: Complemental strand, 8165 - 7874
Alignment:
| Q |
18 |
catcaaaccaccgcccacctcccacaccagccccattttttatatttattaaattattccaccaaacagaattaaatcgcccatcctctgcgattatacc |
117 |
Q |
| |
|
||||||||||||| |||| |||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||| ||||| ||||| |||||||| || |
|
|
| T |
8165 |
catcaaaccaccgaccacttcccacaccagccccattttaaatattaattaaattattccaccaaacagagttaaaccgcccctcctcagcgattattcc |
8066 |
T |
|
| Q |
118 |
tcctacctccccatatctacctgctaaaactctataccacaaactcctattttcaacccgcatacgccaacaccatttaccaagtaatgccaagttaaac |
217 |
Q |
| |
|
||||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||| ||||||| ||||| ||||| |
|
|
| T |
8065 |
tcctacctccctgtatcgtgttgctaaaactctataccacaaactcctattttcaaccctcatcctccaacaccatttaacaagtaacgccaaattaaat |
7966 |
T |
|
| Q |
218 |
tcccgaatcctctgcactcctaaacctccatcctcctttttggaacaaatagtgtcccagttaatccaagaaattttcctaacctcctcaca |
309 |
Q |
| |
|
| || |||||| |||| || || ||||||| ||| |||||||||||||||| ||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
7965 |
ttccttatcctccgcacccccaatcctccattctctattttggaacaaatagtctcctagttaatccaagaaattttcctaacctcctcaca |
7874 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0032 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0032
Description:
Target: scaffold0032; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 239 - 308
Target Start/End: Complemental strand, 57828 - 57759
Alignment:
| Q |
239 |
aaacctccatcctcctttttggaacaaatagtgtcccagttaatccaagaaattttcctaacctcctcac |
308 |
Q |
| |
|
|||||||||| ||||||||| |||||||| |||| || ||||||||||||| |||||||| ||||||| |
|
|
| T |
57828 |
aaacctccattctcctttttcaaacaaatattgtctcatttaatccaagaaagtttcctaaagtcctcac |
57759 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0003 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0003
Description:
Target: scaffold0003; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 299
Target Start/End: Complemental strand, 224151 - 224094
Alignment:
| Q |
242 |
cctccatcctcctttttggaacaaatagtgtcccagttaatccaagaaattttcctaa |
299 |
Q |
| |
|
||||||| |||||| || |||||||||| ||||| |||||||||||||||||||||| |
|
|
| T |
224151 |
cctccattctccttattcaaacaaatagtatcccatttaatccaagaaattttcctaa |
224094 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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