View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20186_high_15 (Length: 344)
Name: NF20186_high_15
Description: NF20186
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20186_high_15 |
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Alignment Details
Target: chr7 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 10 - 273
Target Start/End: Original strand, 22595376 - 22595643
Alignment:
| Q |
10 |
tcgaagaatataattcaaaccaaacatatatttggtgtataagtcatctcactttatactcaacgtctaatttttcatccatccggtttaagagttctaa |
109 |
Q |
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|||| ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
22595376 |
tcgatgaaaataattcaaaccgaacatatatttggtgtataagtcatctcactttatactcaaagtctaatttttcatccatccggtttaagagttctaa |
22595475 |
T |
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| Q |
110 |
ctcacatttac----tatacctacactttttcactcatgtagctctctgtttcttcaatcaaaataatgcagagatatgagaattttccagctgaaaaat |
205 |
Q |
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||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22595476 |
ctcacatttacttactatacctacactttttcactcatgtagctctctgtttcttcaatcaaaataatgcagagatatgagaattttccagctgaaaaat |
22595575 |
T |
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| Q |
206 |
ccactaacttcagctcacattttcatgccttcaacaaacacaaagcaatgacttgtataaccctctaa |
273 |
Q |
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|||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
22595576 |
ccactaacttcagctcgcattttcatgccttcaacaagcacaaagcaatgacttgtataaccctctaa |
22595643 |
T |
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