View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20186_high_18 (Length: 261)

Name: NF20186_high_18
Description: NF20186
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20186_high_18
NF20186_high_18
[»] chr4 (53 HSPs)
chr4 (17-245)||(27360004-27360231)
chr4 (53-136)||(7273605-7273688)
chr4 (47-91)||(43095904-43095948)
chr4 (45-91)||(10496607-10496653)
chr4 (45-146)||(9284124-9284225)
chr4 (46-114)||(868408-868476)
chr4 (45-136)||(43444615-43444706)
chr4 (45-147)||(4644070-4644172)
chr4 (190-251)||(5350912-5350973)
chr4 (46-83)||(43853733-43853770)
chr4 (47-156)||(45227818-45227926)
chr4 (45-115)||(8670729-8670796)
chr4 (45-85)||(36124009-36124048)
chr4 (73-173)||(36184719-36184817)
chr4 (190-246)||(56341926-56341982)
chr4 (45-136)||(2115363-2115454)
chr4 (45-136)||(10389529-10389620)
chr4 (45-84)||(56156440-56156479)
chr4 (45-147)||(1532120-1532222)
chr4 (45-91)||(4142556-4142602)
chr4 (45-83)||(9048953-9048991)
chr4 (45-91)||(11209965-11210010)
chr4 (45-91)||(12493603-12493649)
chr4 (53-91)||(17949123-17949161)
chr4 (53-91)||(17952975-17953013)
chr4 (45-91)||(19853304-19853350)
chr4 (45-91)||(21686034-21686080)
chr4 (45-91)||(26633463-26633509)
chr4 (45-83)||(36162001-36162039)
chr4 (45-91)||(51888004-51888050)
chr4 (45-91)||(56040438-56040484)
chr4 (45-86)||(7084371-7084411)
chr4 (45-86)||(8517111-8517151)
chr4 (45-86)||(13965972-13966012)
chr4 (45-86)||(14346839-14346879)
chr4 (45-86)||(24826068-24826108)
chr4 (45-90)||(37431581-37431625)
chr4 (45-86)||(38435006-38435046)
chr4 (54-91)||(39838018-39838055)
chr4 (45-86)||(42197982-42198022)
chr4 (45-86)||(43244033-43244073)
chr4 (45-86)||(45350722-45350762)
chr4 (45-86)||(45360201-45360241)
chr4 (45-85)||(2521056-2521096)
chr4 (45-141)||(2624669-2624765)
chr4 (54-86)||(6882373-6882405)
chr4 (54-86)||(7060743-7060775)
chr4 (45-77)||(9180735-9180767)
chr4 (45-141)||(9528652-9528748)
chr4 (45-141)||(25274101-25274197)
chr4 (54-86)||(29266564-29266596)
chr4 (54-86)||(31522375-31522407)
chr4 (45-85)||(55600198-55600237)
[»] scaffold0039 (1 HSPs)
scaffold0039 (45-135)||(53193-53283)
[»] chr2 (59 HSPs)
chr2 (45-136)||(459051-459141)
chr2 (45-135)||(30923250-30923340)
chr2 (47-136)||(28037300-28037389)
chr2 (45-91)||(12553962-12554008)
chr2 (45-136)||(25508861-25508955)
chr2 (45-139)||(37876399-37876496)
chr2 (45-91)||(7677666-7677712)
chr2 (45-147)||(8806070-8806172)
chr2 (48-114)||(13718948-13719014)
chr2 (45-83)||(24461708-24461746)
chr2 (45-147)||(27248926-27249028)
chr2 (45-114)||(3268610-3268679)
chr2 (45-114)||(15690639-15690708)
chr2 (45-90)||(19953942-19953986)
chr2 (45-90)||(36868433-36868477)
chr2 (45-173)||(38445344-38445473)
chr2 (47-136)||(39284341-39284430)
chr2 (45-86)||(41328005-41328046)
chr2 (54-90)||(4603976-4604012)
chr2 (48-136)||(7558667-7558755)
chr2 (45-89)||(19062141-19062185)
chr2 (45-109)||(33228763-33228827)
chr2 (45-109)||(36324096-36324160)
chr2 (47-86)||(7071428-7071467)
chr2 (45-92)||(12646912-12646959)
chr2 (45-108)||(26025271-26025334)
chr2 (45-91)||(4903938-4903984)
chr2 (45-91)||(5427662-5427708)
chr2 (45-91)||(10929925-10929971)
chr2 (45-91)||(22538087-22538133)
chr2 (45-91)||(29279358-29279404)
chr2 (45-91)||(31193129-31193175)
chr2 (45-91)||(31788717-31788763)
chr2 (45-83)||(37994552-37994590)
chr2 (45-147)||(41431232-41431334)
chr2 (45-91)||(43696292-43696337)
chr2 (45-114)||(2808248-2808317)
chr2 (45-86)||(3527415-3527455)
chr2 (45-98)||(9374338-9374391)
chr2 (45-90)||(9978330-9978374)
chr2 (47-147)||(11985028-11985131)
chr2 (45-86)||(13878661-13878701)
chr2 (45-86)||(14018786-14018826)
chr2 (45-86)||(16136507-16136547)
chr2 (45-86)||(20560785-20560825)
chr2 (45-114)||(21570183-21570252)
chr2 (45-86)||(25068270-25068310)
chr2 (45-86)||(29543222-29543262)
chr2 (54-91)||(31908477-31908514)
chr2 (45-86)||(33012477-33012517)
chr2 (46-91)||(35220589-35220634)
chr2 (45-86)||(35333934-35333974)
chr2 (54-86)||(4739758-4739790)
chr2 (48-108)||(8308338-8308398)
chr2 (45-93)||(12236833-12236881)
chr2 (45-133)||(24587954-24588041)
chr2 (47-147)||(30420873-30420973)
chr2 (54-86)||(32015682-32015714)
chr2 (54-86)||(44942715-44942747)
[»] chr6 (32 HSPs)
chr6 (45-141)||(1450528-1450624)
chr6 (48-141)||(14866641-14866734)
chr6 (45-91)||(34185486-34185532)
chr6 (45-141)||(16419364-16419460)
chr6 (45-91)||(67793-67839)
chr6 (45-91)||(3913366-3913412)
chr6 (45-147)||(25064436-25064538)
chr6 (45-91)||(33052960-33053006)
chr6 (45-147)||(35001790-35001892)
chr6 (45-81)||(32060138-32060174)
chr6 (45-136)||(4088671-4088762)
chr6 (45-91)||(127917-127963)
chr6 (45-135)||(4984342-4984432)
chr6 (45-147)||(12059548-12059650)
chr6 (45-91)||(12170720-12170766)
chr6 (45-87)||(19164820-19164862)
chr6 (45-147)||(23947092-23947194)
chr6 (45-83)||(28981436-28981474)
chr6 (45-91)||(30493784-30493830)
chr6 (45-83)||(31297079-31297117)
chr6 (45-91)||(32327012-32327058)
chr6 (64-102)||(33543421-33543459)
chr6 (47-89)||(34018814-34018856)
chr6 (45-86)||(4660857-4660897)
chr6 (45-86)||(5146355-5146395)
chr6 (47-92)||(11321338-11321383)
chr6 (45-86)||(12653970-12654010)
chr6 (45-86)||(15589777-15589817)
chr6 (45-86)||(19402504-19402544)
chr6 (45-86)||(23654678-23654718)
chr6 (45-86)||(30813486-30813526)
chr6 (45-85)||(7514995-7515035)
[»] chr7 (49 HSPs)
chr7 (45-147)||(17611591-17611693)
chr7 (45-141)||(40741772-40741868)
chr7 (45-156)||(32521704-32521814)
chr7 (45-136)||(35261508-35261599)
chr7 (45-124)||(43369549-43369628)
chr7 (47-136)||(28407712-28407804)
chr7 (45-147)||(42066837-42066939)
chr7 (46-147)||(433467-433568)
chr7 (45-114)||(2843016-2843085)
chr7 (45-141)||(3267009-3267108)
chr7 (45-114)||(26583943-26584012)
chr7 (47-91)||(25286982-25287026)
chr7 (45-85)||(44311580-44311620)
chr7 (54-89)||(10094866-10094901)
chr7 (45-155)||(12141099-12141212)
chr7 (190-245)||(35339103-35339158)
chr7 (45-112)||(46818179-46818246)
chr7 (45-88)||(48316611-48316654)
chr7 (45-91)||(9977002-9977048)
chr7 (45-91)||(28044548-28044594)
chr7 (45-135)||(32684880-32684970)
chr7 (45-91)||(34899399-34899445)
chr7 (48-90)||(40762013-40762055)
chr7 (45-91)||(48061675-48061721)
chr7 (45-114)||(1485031-1485100)
chr7 (45-86)||(2623021-2623061)
chr7 (45-86)||(4621032-4621072)
chr7 (48-85)||(8001341-8001378)
chr7 (54-91)||(15670470-15670507)
chr7 (45-86)||(21991091-21991131)
chr7 (45-90)||(23808751-23808795)
chr7 (45-90)||(32741168-32741212)
chr7 (45-86)||(38277226-38277266)
chr7 (45-90)||(43847398-43847442)
chr7 (45-86)||(44482530-44482570)
chr7 (45-136)||(46244043-46244131)
chr7 (45-86)||(48643478-48643518)
chr7 (54-86)||(8180230-8180262)
chr7 (54-86)||(11833447-11833479)
chr7 (58-86)||(17473425-17473453)
chr7 (58-86)||(17579761-17579789)
chr7 (45-101)||(20083584-20083640)
chr7 (55-91)||(21603882-21603918)
chr7 (45-81)||(24610051-24610087)
chr7 (54-86)||(25854886-25854918)
chr7 (45-114)||(36143977-36144050)
chr7 (54-86)||(36579001-36579033)
chr7 (54-86)||(37375716-37375748)
chr7 (45-85)||(39707698-39707737)
[»] chr8 (36 HSPs)
chr8 (45-141)||(34680663-34680759)
chr8 (45-91)||(19443843-19443889)
chr8 (45-114)||(12654303-12654372)
chr8 (45-147)||(34612011-34612113)
chr8 (48-93)||(15596946-15596991)
chr8 (48-100)||(16644724-16644777)
chr8 (45-90)||(37613061-37613105)
chr8 (45-90)||(39067350-39067394)
chr8 (45-141)||(4809177-4809273)
chr8 (45-85)||(20227067-20227107)
chr8 (54-90)||(38545484-38545520)
chr8 (45-136)||(29777437-29777528)
chr8 (45-136)||(39152917-39153008)
chr8 (45-91)||(9637199-9637245)
chr8 (45-87)||(10377931-10377973)
chr8 (45-91)||(17693403-17693449)
chr8 (45-91)||(27498156-27498202)
chr8 (45-83)||(40618863-40618901)
chr8 (45-86)||(2234130-2234170)
chr8 (45-114)||(9072958-9073027)
chr8 (45-90)||(13570427-13570471)
chr8 (58-91)||(14544681-14544714)
chr8 (45-86)||(24790830-24790870)
chr8 (45-86)||(31202877-31202917)
chr8 (46-91)||(40211091-40211136)
chr8 (54-91)||(41362157-41362194)
chr8 (54-86)||(1809906-1809938)
chr8 (54-86)||(2968944-2968976)
chr8 (45-81)||(3673704-3673740)
chr8 (54-86)||(4757577-4757609)
chr8 (54-86)||(9501997-9502029)
chr8 (46-114)||(19876438-19876506)
chr8 (45-114)||(21238015-21238086)
chr8 (45-89)||(30026542-30026585)
chr8 (47-147)||(32724258-32724358)
chr8 (53-81)||(34493276-34493304)
[»] chr5 (39 HSPs)
chr5 (45-111)||(42886733-42886800)
chr5 (45-141)||(36057103-36057199)
chr5 (45-136)||(7150110-7150201)
chr5 (45-91)||(26825680-26825726)
chr5 (45-147)||(41418204-41418305)
chr5 (47-114)||(11192603-11192668)
chr5 (47-147)||(35475115-35475215)
chr5 (47-114)||(20257473-20257540)
chr5 (190-245)||(21575051-21575106)
chr5 (47-89)||(4771108-4771150)
chr5 (45-91)||(13007479-13007525)
chr5 (45-114)||(10649877-10649946)
chr5 (45-81)||(6217158-6217194)
chr5 (54-90)||(6281469-6281505)
chr5 (45-136)||(7241997-7242088)
chr5 (45-136)||(7247172-7247263)
chr5 (45-91)||(6011930-6011976)
chr5 (45-83)||(8984781-8984819)
chr5 (45-91)||(9113517-9113563)
chr5 (45-147)||(16981494-16981596)
chr5 (45-147)||(21060058-21060160)
chr5 (45-91)||(24229576-24229622)
chr5 (53-91)||(25980407-25980445)
chr5 (45-147)||(34881919-34882021)
chr5 (45-91)||(42505065-42505110)
chr5 (45-147)||(43148929-43149031)
chr5 (45-86)||(9196683-9196723)
chr5 (45-86)||(17331757-17331797)
chr5 (45-114)||(19280712-19280781)
chr5 (45-86)||(23881768-23881808)
chr5 (45-90)||(26294726-26294770)
chr5 (45-86)||(34431493-34431533)
chr5 (45-86)||(39531060-39531100)
chr5 (54-86)||(586169-586201)
chr5 (54-86)||(3740761-3740793)
chr5 (45-141)||(7612834-7612929)
chr5 (58-90)||(28041054-28041086)
chr5 (190-238)||(29681791-29681839)
chr5 (54-90)||(42396170-42396206)
[»] chr3 (53 HSPs)
chr3 (45-141)||(35175601-35175699)
chr3 (45-141)||(40487522-40487621)
chr3 (45-136)||(46178776-46178867)
chr3 (45-91)||(10229726-10229772)
chr3 (45-147)||(12116295-12116397)
chr3 (45-147)||(46934836-46934938)
chr3 (45-100)||(21488337-21488392)
chr3 (45-108)||(30830205-30830268)
chr3 (45-91)||(9998717-9998763)
chr3 (45-91)||(10108486-10108532)
chr3 (45-91)||(10233320-10233366)
chr3 (45-91)||(21313286-21313332)
chr3 (45-91)||(35864753-35864799)
chr3 (45-91)||(36910558-36910604)
chr3 (45-91)||(46304313-46304359)
chr3 (45-86)||(23799740-23799781)
chr3 (45-114)||(24396291-24396360)
chr3 (74-114)||(36237113-36237153)
chr3 (45-136)||(3848694-3848785)
chr3 (45-136)||(22803238-22803329)
chr3 (45-136)||(36906330-36906421)
chr3 (45-91)||(14585886-14585931)
chr3 (45-91)||(19645614-19645659)
chr3 (45-91)||(20464757-20464803)
chr3 (45-91)||(21431865-21431911)
chr3 (45-91)||(43017138-43017184)
chr3 (45-91)||(50981125-50981171)
chr3 (45-91)||(51084259-51084305)
chr3 (45-91)||(52922909-52922955)
chr3 (45-91)||(54149241-54149287)
chr3 (49-114)||(6823403-6823468)
chr3 (45-86)||(6954488-6954529)
chr3 (45-86)||(11819513-11819553)
chr3 (45-86)||(13701662-13701702)
chr3 (45-86)||(24483356-24483396)
chr3 (45-146)||(32607667-32607768)
chr3 (45-90)||(40012932-40012976)
chr3 (45-90)||(45047922-45047966)
chr3 (45-86)||(47896406-47896447)
chr3 (45-86)||(48401521-48401562)
chr3 (45-86)||(49627764-49627804)
chr3 (45-86)||(55090359-55090399)
chr3 (45-86)||(55455291-55455331)
chr3 (54-86)||(1074562-1074594)
chr3 (54-86)||(2192507-2192539)
chr3 (54-86)||(7448715-7448747)
chr3 (54-86)||(7456857-7456889)
chr3 (45-136)||(21533601-21533695)
chr3 (54-90)||(34103426-34103462)
chr3 (47-91)||(37041018-37041062)
chr3 (47-91)||(45568239-45568283)
chr3 (54-86)||(54706400-54706432)
chr3 (54-90)||(55446473-55446509)
[»] chr1 (38 HSPs)
chr1 (47-148)||(39927332-39927433)
chr1 (45-141)||(26535537-26535636)
chr1 (45-147)||(47133098-47133202)
chr1 (45-136)||(9172705-9172796)
chr1 (45-136)||(9180687-9180778)
chr1 (45-141)||(27456685-27456789)
chr1 (45-136)||(51868420-51868511)
chr1 (45-91)||(44915893-44915939)
chr1 (45-86)||(33486687-33486728)
chr1 (47-136)||(45805606-45805695)
chr1 (47-147)||(3871612-3871711)
chr1 (48-92)||(21947413-21947457)
chr1 (45-141)||(30879285-30879381)
chr1 (45-141)||(41081479-41081575)
chr1 (58-141)||(19052122-19052205)
chr1 (45-136)||(25406059-25406150)
chr1 (47-141)||(799629-799723)
chr1 (45-91)||(5984070-5984116)
chr1 (45-91)||(7337455-7337501)
chr1 (45-91)||(10776253-10776299)
chr1 (45-147)||(11454141-11454243)
chr1 (45-91)||(11462274-11462320)
chr1 (56-90)||(12147724-12147758)
chr1 (45-91)||(35484183-35484229)
chr1 (45-91)||(36894200-36894246)
chr1 (45-147)||(48217641-48217743)
chr1 (45-86)||(4882029-4882069)
chr1 (45-86)||(12872035-12872075)
chr1 (45-86)||(13152856-13152896)
chr1 (45-114)||(19715670-19715739)
chr1 (45-86)||(29205697-29205737)
chr1 (53-114)||(39987655-39987716)
chr1 (45-86)||(44517577-44517617)
chr1 (45-86)||(49504387-49504428)
chr1 (48-92)||(23289187-23289231)
chr1 (54-86)||(25032763-25032795)
chr1 (45-89)||(32678936-32678980)
chr1 (45-81)||(50377587-50377623)
[»] scaffold0113 (1 HSPs)
scaffold0113 (45-136)||(36465-36556)
[»] scaffold0603 (1 HSPs)
scaffold0603 (45-91)||(7978-8024)
[»] scaffold0121 (1 HSPs)
scaffold0121 (45-91)||(31066-31112)
[»] scaffold0009 (1 HSPs)
scaffold0009 (45-136)||(57881-57974)
[»] scaffold0003 (1 HSPs)
scaffold0003 (45-147)||(361574-361676)
[»] scaffold0157 (1 HSPs)
scaffold0157 (45-91)||(26828-26874)
[»] scaffold0536 (1 HSPs)
scaffold0536 (45-86)||(3324-3364)
[»] scaffold0155 (1 HSPs)
scaffold0155 (45-86)||(35504-35544)
[»] scaffold0294 (1 HSPs)
scaffold0294 (54-86)||(3727-3759)
[»] scaffold0127 (1 HSPs)
scaffold0127 (45-136)||(15695-15789)
[»] scaffold0110 (1 HSPs)
scaffold0110 (73-109)||(41215-41251)
[»] scaffold0049 (1 HSPs)
scaffold0049 (45-85)||(71092-71132)


Alignment Details
Target: chr4 (Bit Score: 176; Significance: 7e-95; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 17 - 245
Target Start/End: Original strand, 27360004 - 27360231
Alignment:
Q  17 caatcgatataccatagttaannnnnnnacaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaaaa 116  Q
    |||||||||||||||||||||       |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  27360004 caatcgatataccatagttaatttttttacaaaaataaaatgatattcattctttcaaattgatagagtatatcatttaacatcgctaaaaacataaaaa 27360103  T
Q  117 ataaatttacgaacaaactcgcaacgtccaaagttaataaacatacaatgacaaaatactagtatgtagttactgttataaataattaacttggtggatg 216  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  27360104 ataaatttacgaacaaactcacaacgtcc-aagttaataaacatacaatgacaaaatactagtatgtagttactgttataaataattaacttagtggatg 27360202  T
Q  217 ttcatcattagtcttccaccttccaataa 245  Q
    ||||||| |||||||||||||||| ||||    
T  27360203 ttcatcagtagtcttccaccttcctataa 27360231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 53 - 136
Target Start/End: Original strand, 7273605 - 7273688
Alignment:
Q  53 aaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaaaaataaatttacgaacaaactc 136  Q
    |||||||||||||||| |||||||||||||||||||| ||| |||| |||||||||| ||||  |||||| | |||||||||||    
T  7273605 aaaacgatattcattcattcaaattgatagagtatattattcaacaccgttaaaaacgtaaatgataaatctgcgaacaaactc 7273688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 91
Target Start/End: Complemental strand, 43095948 - 43095904
Alignment:
Q  47 aaaaataaaacgatattcattctttcaaattgatagagtatatca 91  Q
    |||||||||||||||||||||| ||||||||||||||||||||||    
T  43095948 aaaaataaaacgatattcattcattcaaattgatagagtatatca 43095904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 45 - 91
Target Start/End: Complemental strand, 10496653 - 10496607
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatca 91  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||||    
T  10496653 acaaaattaaaacgatattcattcattcaaattgatagagtatatca 10496607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 45 - 146
Target Start/End: Complemental strand, 9284225 - 9284124
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaaaaataaatttacgaacaaactcgcaacgtc 144  Q
    ||||||| |||| ||||||||||| ||||||| || ||| || |||||| |||| || ||||||| ||||| || ||| ||||||||||||| |||| ||    
T  9284225 acaaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaagatgaatctacgaacaaactcacaacatc 9284126  T
Q  145 ca 146  Q
    ||    
T  9284125 ca 9284124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 46 - 114
Target Start/End: Complemental strand, 868476 - 868408
Alignment:
Q  46 caaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaa 114  Q
    ||||||||||| ||||||||||| || |||| || ||| |||||||||||||| || ||||||||||||    
T  868476 caaaaataaaatgatattcattcgtttaaatcgagagattatatcatttaacaccgctaaaaacataaa 868408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 136
Target Start/End: Complemental strand, 43444706 - 43444615
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaaaaataaatttacgaacaaactc 136  Q
    |||||||||||| ||||||||||| |||||||||| ||| || |||||| |||| |||||| ||| ||||  || ||| | |||||||||||    
T  43444706 acaaaaataaaatgatattcattcattcaaattgagagattacatcattcaacaccgttaagaacgtaaaggatgaatctgcgaacaaactc 43444615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 45 - 147
Target Start/End: Complemental strand, 4644172 - 4644070
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaaaaataaatttacgaacaaactcgcaacgtc 144  Q
    |||||||||||| ||||||||||| ||||||| || ||| || |||||| ||||||| ||||||| ||||  || ||| | ||||||| ||| |||| ||    
T  4644172 acaaaaataaaatgatattcattcattcaaatcgagagattacatcattcaacatcgctaaaaacgtaaaggatgaatctgcgaacaagctcacaacatc 4644073  T
Q  145 caa 147  Q
    |||    
T  4644072 caa 4644070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 251
Target Start/End: Original strand, 5350912 - 5350973
Alignment:
Q  190 tgttataaataattaacttggtggatgttcatcattagtcttccaccttccaataatatcca 251  Q
    |||||| ||||||| |||| |||||||| |||| ||||||||||||||||| ||||| ||||    
T  5350912 tgttatgaataattgacttagtggatgtccatccttagtcttccaccttcctataatctcca 5350973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 46 - 83
Target Start/End: Complemental strand, 43853770 - 43853733
Alignment:
Q  46 caaaaataaaacgatattcattctttcaaattgataga 83  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  43853770 caaaaataaaacgatattcattcattcaaattgataga 43853733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 156
Target Start/End: Original strand, 45227818 - 45227926
Alignment:
Q  47 aaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaaaaataaatttacgaacaaactcgcaacgtcca 146  Q
    ||||| |||| ||||||||||| ||||||| || ||| || |||||| |||| || ||||||| ||||  || ||| ||||||||||||| |||| |||     
T  45227818 aaaaaaaaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctacgaacaaactcacaacatcc- 45227916  T
Q  147 aagttaataa 156  Q
    ||||||||||    
T  45227917 aagttaataa 45227926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 115
Target Start/End: Complemental strand, 8670796 - 8670729
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaaa 115  Q
    |||||||||||||||||||||||| ||||||| |||||| || ||||   ||||||| ||||||| |||||    
T  8670796 acaaaaataaaacgatattcattcattcaaatcgatagattacatca---aacatcgctaaaaacgtaaaa 8670729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 85
Target Start/End: Original strand, 36124009 - 36124048
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagt 85  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  36124009 acaaaaataaa-cgatattcattctttcaaattgatagagt 36124048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 173
Target Start/End: Complemental strand, 36184817 - 36184719
Alignment:
Q  73 aaattgatagagtatatcatttaacatcgttaaaaacataaaaaataaatttacgaacaaactcgcaacgtccaaagttaataaacatacaatgacaaaa 172  Q
    |||||||||||||| |||||| ||||| | ||||||| |||| ||||  ||||| ||||||||| |||| ||| |||||||| | ||||||| |||||||    
T  36184817 aaattgatagagtacatcattcaacattgctaaaaacgtaaagaatagttttacaaacaaactcacaacatcc-aagttaat-agcatacaacgacaaaa 36184720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 246
Target Start/End: Complemental strand, 56341982 - 56341926
Alignment:
Q  190 tgttataaataattaacttggtggatgttcatcattagtcttccaccttccaataat 246  Q
    |||||| ||||  ||| |||||||||||||||| ||||||||||||||||| |||||    
T  56341982 tgttatgaatatataatttggtggatgttcatctttagtcttccaccttcctataat 56341926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 45 - 136
Target Start/End: Original strand, 2115363 - 2115454
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaaaaataaatttacgaacaaactc 136  Q
    ||||||| |||| ||||||||||| ||||||| || ||| || |||||| |||| || ||||||||||||  || ||| | |||||||||||    
T  2115363 acaaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacataaaggatgaatctgcgaacaaactc 2115454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 45 - 136
Target Start/End: Original strand, 10389529 - 10389620
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaaaaataaatttacgaacaaactc 136  Q
    |||||||||||| ||||||||||| ||||||| || ||| || | |||| |||| || ||||||||||||  || |||  ||||||||||||    
T  10389529 acaaaaataaaatgatattcattcattcaaatcgagagattacaccattcaacaccgctaaaaacataaaggatgaatccacgaacaaactc 10389620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 45 - 84
Target Start/End: Original strand, 56156440 - 56156479
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagag 84  Q
    ||||||| |||||||||||||||| |||||||||||||||    
T  56156440 acaaaaacaaaacgatattcattcattcaaattgatagag 56156479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 147
Target Start/End: Complemental strand, 1532222 - 1532120
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaaaaataaatttacgaacaaactcgcaacgtc 144  Q
    |||||||||||| ||||||||||| ||||||| || ||| ||  ||||| |||| || ||||||||||||  || ||| | ||||||| ||| |||| ||    
T  1532222 acaaaaataaaatgatattcattcattcaaatcgagagattacgtcattcaacaccgctaaaaacataaaggatgaatctgcgaacaagctcacaacatc 1532123  T
Q  145 caa 147  Q
    |||    
T  1532122 caa 1532120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 91
Target Start/End: Original strand, 4142556 - 4142602
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatca 91  Q
    ||||||| |||||||||||||||| ||||||| ||||||||| ||||    
T  4142556 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatca 4142602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 83
Target Start/End: Complemental strand, 9048991 - 9048953
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgataga 83  Q
    ||||||| |||||||||||||||| ||||||||||||||    
T  9048991 acaaaaacaaaacgatattcattcattcaaattgataga 9048953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 91
Target Start/End: Original strand, 11209965 - 11210010
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatca 91  Q
    |||||||||||| ||||||||||| ||||||||||||||||| ||||    
T  11209965 acaaaaataaaa-gatattcattcattcaaattgatagagtacatca 11210010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 91
Target Start/End: Complemental strand, 12493649 - 12493603
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatca 91  Q
    |||||||||||| ||||||||||| || |||||||||||||| ||||    
T  12493649 acaaaaataaaatgatattcattcattaaaattgatagagtacatca 12493603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 91
Target Start/End: Original strand, 17949123 - 17949161
Alignment:
Q  53 aaaacgatattcattctttcaaattgatagagtatatca 91  Q
    |||||||||||||||| ||||||| ||||||||||||||    
T  17949123 aaaacgatattcattcattcaaatcgatagagtatatca 17949161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 91
Target Start/End: Original strand, 17952975 - 17953013
Alignment:
Q  53 aaaacgatattcattctttcaaattgatagagtatatca 91  Q
    |||||||||||||||| ||||||| ||||||||||||||    
T  17952975 aaaacgatattcattcattcaaatcgatagagtatatca 17953013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 91
Target Start/End: Original strand, 19853304 - 19853350
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatca 91  Q
    ||||||| |||||||||||||||| ||||||| ||||||||| ||||    
T  19853304 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatca 19853350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 91
Target Start/End: Original strand, 21686034 - 21686080
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatca 91  Q
    ||||||| |||||||||||||||| ||||||| ||||||||| ||||    
T  21686034 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatca 21686080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 91
Target Start/End: Original strand, 26633463 - 26633509
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatca 91  Q
    ||||||| |||||||||||||||| ||||||| ||||||||| ||||    
T  26633463 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatca 26633509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 83
Target Start/End: Complemental strand, 36162039 - 36162001
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgataga 83  Q
    |||||||||||| ||||||||||| ||||||||||||||    
T  36162039 acaaaaataaaatgatattcattcattcaaattgataga 36162001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 91
Target Start/End: Original strand, 51888004 - 51888050
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatca 91  Q
    |||||||||||| || |||||||| |||||||||||||| |||||||    
T  51888004 acaaaaataaaatgacattcattcattcaaattgatagaatatatca 51888050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 91
Target Start/End: Original strand, 56040438 - 56040484
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatca 91  Q
    ||||||| |||||||||||||||| ||||||| ||||||||| ||||    
T  56040438 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatca 56040484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 86
Target Start/End: Complemental strand, 7084411 - 7084371
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagta 86  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  7084411 acaaaaataaa-cgatattcattcattcaaattgatagagta 7084371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 8517111 - 8517151
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagta 86  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  8517111 acaaaaataaa-cgatattcattcattcaaattgatagagta 8517151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 86
Target Start/End: Complemental strand, 13966012 - 13965972
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagta 86  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  13966012 acaaaaataaa-cgatattcattcattcaaattgatagagta 13965972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 86
Target Start/End: Complemental strand, 14346879 - 14346839
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagta 86  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  14346879 acaaaaataaa-cgatattcattcattcaaattgatagagta 14346839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 86
Target Start/End: Complemental strand, 24826108 - 24826068
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagta 86  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  24826108 acaaaaataaa-cgatattcattcattcaaattgatagagta 24826068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 90
Target Start/End: Complemental strand, 37431625 - 37431581
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatc 90  Q
    ||||||||||| |||||||| |||||| ||||||||||||||||||    
T  37431625 acaaaaataaa-cgatattctttcttttaaattgatagagtatatc 37431581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 86
Target Start/End: Complemental strand, 38435046 - 38435006
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagta 86  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  38435046 acaaaaataaa-cgatattcattcattcaaattgatagagta 38435006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 54 - 91
Target Start/End: Complemental strand, 39838055 - 39838018
Alignment:
Q  54 aaacgatattcattctttcaaattgatagagtatatca 91  Q
    ||||||||||||||| ||||||||| ||||||||||||    
T  39838055 aaacgatattcattcattcaaattgttagagtatatca 39838018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 86
Target Start/End: Complemental strand, 42198022 - 42197982
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagta 86  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  42198022 acaaaaataaa-cgatattcattcattcaaattgatagagta 42197982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 43244033 - 43244073
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagta 86  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  43244033 acaaaaataaa-cgatattcattcattcaaattgatagagta 43244073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 45350722 - 45350762
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagta 86  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  45350722 acaaaaataaa-cgatattcattcattcaaattgatagagta 45350762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 45360201 - 45360241
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagta 86  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  45360201 acaaaaataaa-cgatattcattcattcaaattgatagagta 45360241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 85
Target Start/End: Complemental strand, 2521096 - 2521056
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagt 85  Q
    ||||||| |||||||||||||||| ||||||| ||||||||    
T  2521096 acaaaaacaaaacgatattcattcattcaaatcgatagagt 2521056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 141
Target Start/End: Complemental strand, 2624765 - 2624669
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaaaaataaatttacgaacaaactcgcaac 141  Q
    ||||||| ||||||||||| |||| || |||| ||| ||||| | |||| |||  || |||||| ||||| ||| ||||| ||||||||||| ||||    
T  2624765 acaaaaacaaaacgatatttattcattaaaatcgatggagtacaccattcaacgccgctaaaaaaataaagaatgaatttgcgaacaaactcacaac 2624669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 6882405 - 6882373
Alignment:
Q  54 aaacgatattcattctttcaaattgatagagta 86  Q
    ||||||||||||||| |||||||||||||||||    
T  6882405 aaacgatattcattcattcaaattgatagagta 6882373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 7060775 - 7060743
Alignment:
Q  54 aaacgatattcattctttcaaattgatagagta 86  Q
    ||||||||||||||| |||||||||||||||||    
T  7060775 aaacgatattcattcattcaaattgatagagta 7060743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 77
Target Start/End: Complemental strand, 9180767 - 9180735
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaatt 77  Q
    |||||||||||||||||||||||| ||||||||    
T  9180767 acaaaaataaaacgatattcattcattcaaatt 9180735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 141
Target Start/End: Original strand, 9528652 - 9528748
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaaaaataaatttacgaacaaactcgcaac 141  Q
    ||||||| |||| ||||||||||| ||||||| || ||| || |||||| |||| || ||||||| ||||  || ||| | ||||||||||| ||||    
T  9528652 acaaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacaac 9528748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 141
Target Start/End: Complemental strand, 25274197 - 25274101
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaaaaataaatttacgaacaaactcgcaac 141  Q
    ||||||| |||| ||||||||||| ||||||| || ||| || |||||| |||| || ||||||| ||||  || ||| | ||||||||||| ||||    
T  25274197 acaaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacaac 25274101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 29266564 - 29266596
Alignment:
Q  54 aaacgatattcattctttcaaattgatagagta 86  Q
    ||||||||||||||| |||||||||||||||||    
T  29266564 aaacgatattcattcattcaaattgatagagta 29266596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 31522407 - 31522375
Alignment:
Q  54 aaacgatattcattctttcaaattgatagagta 86  Q
    ||||||||||||||| |||||||||||||||||    
T  31522407 aaacgatattcattcattcaaattgatagagta 31522375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 85
Target Start/End: Original strand, 55600198 - 55600237
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagt 85  Q
    ||||||||||| |||||||||||| ||||||||||||||||    
T  55600198 acaaaaataaa-cgatattcattcattcaaattgatagagt 55600237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 45 - 135
Target Start/End: Original strand, 53193 - 53283
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaaaaataaatttacgaacaaact 135  Q
    ||||||| |||||||||||||||| |||||||||||| |||| |||||| ||||||  ||||||||||||| |||||| ||||||||||||    
T  53193 acaaaaacaaaacgatattcattcattcaaattgatatagtacatcattcaacatcactaaaaacataaaagataaatctacgaacaaact 53283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 7e-21; HSPs: 59)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 45 - 136
Target Start/End: Original strand, 459051 - 459141
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaaaaataaatttacgaacaaactc 136  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||| |||| |  ||||||||||||| || ||| |||||||||||||    
T  459051 acaaaaataaaacgatattcattcattcaaatcgatagagtatatcattcaacaccactaaaaacataaaagat-aatctacgaacaaactc 459141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 45 - 135
Target Start/End: Original strand, 30923250 - 30923340
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaaaaataaatttacgaacaaact 135  Q
    ||||||| |||| ||||||||||| ||||||||||||||||| |||||||||||| | ||||| | |||| ||| ||| | ||||||||||    
T  30923250 acaaaaacaaaatgatattcattcattcaaattgatagagtacatcatttaacattgctaaaatcgtaaataatgaatctgcgaacaaact 30923340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 47 - 136
Target Start/End: Complemental strand, 28037389 - 28037300
Alignment:
Q  47 aaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaaaaataaatttacgaacaaactc 136  Q
    |||||||||| ||||||||||| |||| || |||| |||| |||||||||||||||||||||  ||||  || ||||| |||||||||||    
T  28037389 aaaaataaaatgatattcattcattcagatcgatatagtacatcatttaacatcgttaaaaatgtaaatgatgaatttgcgaacaaactc 28037300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 45 - 91
Target Start/End: Original strand, 12553962 - 12554008
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatca 91  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||    
T  12553962 acaaaaataaaatgatattcattcattcaaattgatagagtatatca 12554008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 45 - 136
Target Start/End: Original strand, 25508861 - 25508955
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcattt---aacatcgttaaaaacataaaaaataaatttacgaacaaactc 136  Q
    ||||||| ||||||||||| |||| ||||||||||||||||| ||||| |   ||||||| ||||||||||||  || ||| | |||||||||||    
T  25508861 acaaaaacaaaacgatatttattcattcaaattgatagagtacatcatatacaaacatcggtaaaaacataaacgatgaatctgcgaacaaactc 25508955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 139
Target Start/End: Original strand, 37876399 - 37876496
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcattt---aacatcgttaaaaacataaaaaataaatttacgaacaaactcgca 139  Q
    ||||||| |||||||||||||||| ||||||||||||||||| ||||  |   ||||||| ||||||||||||   | ||| | ||||||||||||||    
T  37876399 acaaaaacaaaacgatattcattcattcaaattgatagagtacatcaaatacaaacatcgctaaaaacataaatggtgaatctgcgaacaaactcgca 37876496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 45 - 91
Target Start/End: Original strand, 7677666 - 7677712
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatca 91  Q
    ||||||| ||||||||||||||| ||| |||||||||||||||||||    
T  7677666 acaaaaacaaaacgatattcatttttttaaattgatagagtatatca 7677712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 45 - 147
Target Start/End: Complemental strand, 8806172 - 8806070
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaaaaataaatttacgaacaaactcgcaacgtc 144  Q
    |||||||||||| ||||||||||| ||||||| || ||| || |||||| ||||||| ||||||| ||||  || ||| | ||||||| ||| |||| ||    
T  8806172 acaaaaataaaatgatattcattcattcaaatcgagagattacatcattcaacatcgctaaaaacgtaaaggatgaatctgcgaacaatctcacaacatc 8806073  T
Q  145 caa 147  Q
    |||    
T  8806072 caa 8806070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 48 - 114
Target Start/End: Original strand, 13718948 - 13719014
Alignment:
Q  48 aaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaa 114  Q
    ||||||||| ||||||||||| |||||| |||||||||  |||||| ||||||| ||||||| ||||    
T  13718948 aaaataaaatgatattcattcattcaaaatgatagagtgcatcattcaacatcgctaaaaacgtaaa 13719014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 45 - 83
Target Start/End: Complemental strand, 24461746 - 24461708
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgataga 83  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  24461746 acaaaaataaaacgatattcattcattcaaattgataga 24461708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 27248926 - 27249028
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaaaaataaatttacgaacaaactcgcaacgtc 144  Q
    ||||||| |||| ||||||||||| ||||||| || ||| ||||||||| |||| || ||||||| ||||  || ||| | ||||||||||| |||| ||    
T  27248926 acaaaaacaaaatgatattcattcattcaaatcgagagattatatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacaacatc 27249025  T
Q  145 caa 147  Q
    |||    
T  27249026 caa 27249028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 114
Target Start/End: Original strand, 3268610 - 3268679
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaa 114  Q
    |||||||||||| ||||||||||| ||||||| || ||| ||||||||| |||| || |||||| |||||    
T  3268610 acaaaaataaaatgatattcattcattcaaatcgagagattatatcattcaacaccgctaaaaatataaa 3268679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 114
Target Start/End: Complemental strand, 15690708 - 15690639
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaa 114  Q
    |||||||| ||||||||||||||| || |||||||||   || |||||| ||||||| ||||||||||||    
T  15690708 acaaaaatcaaacgatattcattcatttaaattgatatgttacatcattcaacatcgctaaaaacataaa 15690639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 90
Target Start/End: Complemental strand, 19953986 - 19953942
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatc 90  Q
    |||||||||||  |||||||||||||||||||||||||||||||||    
T  19953986 acaaaaataaat-gatattcattctttcaaattgatagagtatatc 19953942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 90
Target Start/End: Complemental strand, 36868477 - 36868433
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatc 90  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||    
T  36868477 acaaaaataaa-cgatattcattcattcaaattgatagagtatatc 36868433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 173
Target Start/End: Complemental strand, 38445473 - 38445344
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcattt---aacatcgttaaaaacataaaaaataaatttacgaacaaactcgcaac 141  Q
    ||||||| |||||||||||||||| ||||||| ||||||||| ||||  |   ||||| ||||||||| ||||  || ||| | ||||||||||| || |    
T  38445473 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaaacattgttaaaaacgtaaaggatgaatctgcgaacaaactcacagc 38445374  T
Q  142 gtccaaagttaataaacatacaatgacaaaat 173  Q
      ||||||||||| ||||||||||| ||||||    
T  38445373 -accaaagttaat-aacatacaatggcaaaat 38445344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 136
Target Start/End: Original strand, 39284341 - 39284430
Alignment:
Q  47 aaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaaaaataaatttacgaacaaactc 136  Q
    ||||| |||| | |||| |||| |||||||||||| | || |||||| || ||||||||||| ||||| ||| ||||| |||||||||||    
T  39284341 aaaaacaaaatggtatttattcattcaaattgatatattacatcattcaatatcgttaaaaatataaataatgaatttgcgaacaaactc 39284430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 86
Target Start/End: Complemental strand, 41328046 - 41328005
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagta 86  Q
    ||||||| |||||||||||||||| |||||||||||||||||    
T  41328046 acaaaaacaaaacgatattcattcattcaaattgatagagta 41328005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 90
Target Start/End: Original strand, 4603976 - 4604012
Alignment:
Q  54 aaacgatattcattctttcaaattgatagagtatatc 90  Q
    ||||||||||||||| |||||||||||||||||||||    
T  4603976 aaacgatattcattcattcaaattgatagagtatatc 4604012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 136
Target Start/End: Complemental strand, 7558755 - 7558667
Alignment:
Q  48 aaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaaaaataaatttacgaacaaactc 136  Q
    ||||||||| ||||||||||| ||||||| || ||| || ||||||||||| |  ||||||| ||||  || ||||| |||||||||||    
T  7558755 aaaataaaatgatattcattcattcaaatcgagagattacatcatttaacaccactaaaaacgtaaaggatgaatttgcgaacaaactc 7558667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 19062141 - 19062185
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatat 89  Q
    ||||||||||||| |||||||||| || |||||||||||||||||    
T  19062141 acaaaaataaaacaatattcattcatttaaattgatagagtatat 19062185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 109
Target Start/End: Original strand, 33228763 - 33228827
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaac 109  Q
    |||||||||||| ||||||||||| ||||||| || ||| ||||||||| |||| || |||||||    
T  33228763 acaaaaataaaatgatattcattcattcaaatcgagagattatatcattcaacaccgctaaaaac 33228827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 109
Target Start/End: Complemental strand, 36324160 - 36324096
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaac 109  Q
    ||||||| |||||||||| ||||  |||||||||||| | || |||||| |||||||||||||||    
T  36324160 acaaaaacaaaacgatatacatttattcaaattgatatattacatcattcaacatcgttaaaaac 36324096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 47 - 86
Target Start/End: Original strand, 7071428 - 7071467
Alignment:
Q  47 aaaaataaaacgatattcattctttcaaattgatagagta 86  Q
    ||||| |||||||||||||||| |||||||||||||||||    
T  7071428 aaaaaaaaaacgatattcattcattcaaattgatagagta 7071467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 45 - 92
Target Start/End: Original strand, 12646912 - 12646959
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcat 92  Q
    |||||||||||||||||||||||| ||||||||| || | ||||||||    
T  12646912 acaaaaataaaacgatattcattcattcaaattggtaaaatatatcat 12646959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 45 - 108
Target Start/End: Original strand, 26025271 - 26025334
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaa 108  Q
    ||||||| |||| ||||||||||| |||||||||| ||| ||||||||| ||||| | ||||||    
T  26025271 acaaaaacaaaatgatattcattcattcaaattgagagattatatcattcaacattgctaaaaa 26025334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 91
Target Start/End: Original strand, 4903938 - 4903984
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatca 91  Q
    ||||||| |||||||||||||||| || |||||||||||||| ||||    
T  4903938 acaaaaacaaaacgatattcattcatttaaattgatagagtacatca 4903984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 91
Target Start/End: Original strand, 5427662 - 5427708
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatca 91  Q
    ||||||| |||||||||||||||| ||||||| ||||||||| ||||    
T  5427662 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatca 5427708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 91
Target Start/End: Complemental strand, 10929971 - 10929925
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatca 91  Q
    ||||||| |||| ||||||||||| |||||||||||||| |||||||    
T  10929971 acaaaaacaaaaagatattcattcgttcaaattgatagaatatatca 10929925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 91
Target Start/End: Original strand, 22538087 - 22538133
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatca 91  Q
    ||||||||||||||||||| |||| ||||||||||| || |||||||    
T  22538087 acaaaaataaaacgatatttattcattcaaattgatggattatatca 22538133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 91
Target Start/End: Original strand, 29279358 - 29279404
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatca 91  Q
    |||||||  ||||||||||||||| |||||||||||| |||||||||    
T  29279358 acaaaaactaaacgatattcattcattcaaattgataaagtatatca 29279404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 91
Target Start/End: Original strand, 31193129 - 31193175
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatca 91  Q
    ||||||| |||||||||||||||| ||||||| ||||||||| ||||    
T  31193129 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatca 31193175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 91
Target Start/End: Complemental strand, 31788763 - 31788717
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatca 91  Q
    ||||||| |||||||||||||||| ||||||| ||||||||| ||||    
T  31788763 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatca 31788717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 83
Target Start/End: Complemental strand, 37994590 - 37994552
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgataga 83  Q
    ||||||| |||||||||||||||| ||||||||||||||    
T  37994590 acaaaaacaaaacgatattcattcattcaaattgataga 37994552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 147
Target Start/End: Complemental strand, 41431334 - 41431232
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaaaaataaatttacgaacaaactcgcaacgtc 144  Q
    |||||||||||| ||||||||||| ||||||| || ||| || || ||| |||| || ||||||| ||||  |||||| | |||| |||||| |||| ||    
T  41431334 acaaaaataaaatgatattcattcattcaaatcgagagattacattattcaacaccgctaaaaacgtaaaggataaatctgcgaataaactcacaacatc 41431235  T
Q  145 caa 147  Q
    |||    
T  41431234 caa 41431232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 91
Target Start/End: Complemental strand, 43696337 - 43696292
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatca 91  Q
    ||||||||||| |||||||||||| ||||||||||||||||| ||||    
T  43696337 acaaaaataaa-cgatattcattcattcaaattgatagagtacatca 43696292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 114
Target Start/End: Original strand, 2808248 - 2808317
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaa 114  Q
    ||||||| |||| ||||||||||| ||||||| || ||| | ||||||| ||||||| ||||||| ||||    
T  2808248 acaaaaacaaaatgatattcattcattcaaatcgagagattgtatcattcaacatcgctaaaaacgtaaa 2808317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 86
Target Start/End: Complemental strand, 3527455 - 3527415
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagta 86  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  3527455 acaaaaataaa-cgatattcattcattcaaattgatagagta 3527415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 98
Target Start/End: Original strand, 9374338 - 9374391
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaaca 98  Q
    ||||||| |||||||||||||||| ||||||| || |||||| |||||| ||||    
T  9374338 acaaaaacaaaacgatattcattcattcaaatcgacagagtacatcattcaaca 9374391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 90
Target Start/End: Original strand, 9978330 - 9978374
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatc 90  Q
    ||||||||||| | |||||||||| |||||||||||||||||||||    
T  9978330 acaaaaataaa-ctatattcattcattcaaattgatagagtatatc 9978374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 147
Target Start/End: Original strand, 11985028 - 11985131
Alignment:
Q  47 aaaaataaaacgatattcattctttcaaattgatagagtatatcattt---aacatcgttaaaaacataaaaaataaatttacgaacaaactcgcaacgt 143  Q
    ||||| |||||||||||||||| ||||||| ||||||||| ||||  |   ||||||| ||||||| ||||  || ||||| |||||||| || |||| |    
T  11985028 aaaaaaaaaacgatattcattcattcaaatcgatagagtacatcagatacaaacatcgctaaaaacgtaaatgatgaatttgcgaacaaattcacaacat 11985127  T
Q  144 ccaa 147  Q
    ||||    
T  11985128 ccaa 11985131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 13878661 - 13878701
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagta 86  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  13878661 acaaaaataaa-cgatattcattcattcaaattgatagagta 13878701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 14018786 - 14018826
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagta 86  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  14018786 acaaaaataaa-cgatattcattcattcaaattgatagagta 14018826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 86
Target Start/End: Complemental strand, 16136547 - 16136507
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagta 86  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  16136547 acaaaaataaa-cgatattcattcattcaaattgatagagta 16136507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 20560785 - 20560825
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagta 86  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  20560785 acaaaaataaa-cgatattcattcattcaaattgatagagta 20560825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 114
Target Start/End: Original strand, 21570183 - 21570252
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaa 114  Q
    ||||||| |||| ||||||||||| ||||||| || ||| || |||||| |||| || ||||||||||||    
T  21570183 acaaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacataaa 21570252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 86
Target Start/End: Complemental strand, 25068310 - 25068270
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagta 86  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  25068310 acaaaaataaa-cgatattcattcattcaaattgatagagta 25068270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 86
Target Start/End: Complemental strand, 29543262 - 29543222
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagta 86  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  29543262 acaaaaataaa-cgatattcattcattcaaattgatagagta 29543222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 54 - 91
Target Start/End: Original strand, 31908477 - 31908514
Alignment:
Q  54 aaacgatattcattctttcaaattgatagagtatatca 91  Q
    ||||||||||||||| ||||||||||||||||| ||||    
T  31908477 aaacgatattcattcattcaaattgatagagtacatca 31908514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 86
Target Start/End: Complemental strand, 33012517 - 33012477
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagta 86  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  33012517 acaaaaataaa-cgatattcattcattcaaattgatagagta 33012477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 46 - 91
Target Start/End: Complemental strand, 35220634 - 35220589
Alignment:
Q  46 caaaaataaaacgatattcattctttcaaattgatagagtatatca 91  Q
    |||||| ||||||| |||||||| ||||||||||||||||| ||||    
T  35220634 caaaaacaaaacgacattcattcattcaaattgatagagtacatca 35220589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 86
Target Start/End: Complemental strand, 35333974 - 35333934
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagta 86  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  35333974 acaaaaataaa-cgatattcattcattcaaattgatagagta 35333934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 4739790 - 4739758
Alignment:
Q  54 aaacgatattcattctttcaaattgatagagta 86  Q
    ||||||||||||||| |||||||||||||||||    
T  4739790 aaacgatattcattcattcaaattgatagagta 4739758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 108
Target Start/End: Complemental strand, 8308398 - 8308338
Alignment:
Q  48 aaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaa 108  Q
    |||| |||||||||||||||| ||||||| |||||| || ||| || ||||||| ||||||    
T  8308398 aaaacaaaacgatattcattcattcaaatcgatagattacatcgttcaacatcgctaaaaa 8308338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 93
Target Start/End: Original strand, 12236833 - 12236881
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatt 93  Q
    |||||||||||| ||||||||||| || ||||||| ||| |||||||||    
T  12236833 acaaaaataaaatgatattcattcatttaaattgagagattatatcatt 12236881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 133
Target Start/End: Complemental strand, 24588041 - 24587954
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaaaaataaatttacgaacaaa 133  Q
    ||||||| ||||| | |||||||  |||||||||||| || | |||||| |||||| |||||||| | ||  |||||||||||||||||    
T  24588041 acaaaaacaaaacaacattcatttattcaaattgataaag-acatcattcaacatctttaaaaacttcaaggataaatttacgaacaaa 24587954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 147
Target Start/End: Complemental strand, 30420973 - 30420873
Alignment:
Q  47 aaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaaaaataaatttacgaacaaactcgcaacgtcca 146  Q
    |||||||||| ||||||||||| ||||||| || ||| || |||||| |||| || ||||||  ||||  || ||| | ||||||||||| |||| ||||    
T  30420973 aaaaataaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaatgtaaaggatgaatctgcgaacaaactcacaacatcca 30420874  T
Q  147 a 147  Q
    |    
T  30420873 a 30420873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 32015714 - 32015682
Alignment:
Q  54 aaacgatattcattctttcaaattgatagagta 86  Q
    ||||||||||||||| |||||||||||||||||    
T  32015714 aaacgatattcattcattcaaattgatagagta 32015682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 44942747 - 44942715
Alignment:
Q  54 aaacgatattcattctttcaaattgatagagta 86  Q
    ||||||||||||||| |||||||||||||||||    
T  44942747 aaacgatattcattcattcaaattgatagagta 44942715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 4e-19; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 45 - 141
Target Start/End: Original strand, 1450528 - 1450624
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaaaaataaatttacgaacaaactcgcaac 141  Q
    |||||||||||| ||||||||||| ||||||| |||| | || || |||||||||| |||||||||||||  |||||||| ||||||||||| ||||    
T  1450528 acaaaaataaaatgatattcattcattcaaatcgatataatacattatttaacatcattaaaaacataaatgataaatttgcgaacaaactcacaac 1450624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 141
Target Start/End: Complemental strand, 14866734 - 14866641
Alignment:
Q  48 aaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaaaaataaatttacgaacaaactcgcaac 141  Q
    |||| |||| ||||||||||| |||| ||| ||||||||||| ||| ||||||  ||||||||||||  || ||||||||||||||||| ||||    
T  14866734 aaaacaaaatgatattcattcattcatattaatagagtatattattgaacatcactaaaaacataaatgatgaatttacgaacaaactcacaac 14866641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 45 - 91
Target Start/End: Original strand, 34185486 - 34185532
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatca 91  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||    
T  34185486 acaaaaataaaatgatattcattcattcaaattgatagagtatatca 34185532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 45 - 141
Target Start/End: Complemental strand, 16419460 - 16419364
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaaaaataaatttacgaacaaactcgcaac 141  Q
    |||||||||||| ||||||||||  |||||||||| ||| || |||||| |||| || ||||||| ||||| || ||| | ||||||||||| ||||    
T  16419460 acaaaaataaaatgatattcatttattcaaattgagagattacatcattcaacaccgctaaaaacgtaaaagatgaatctgcgaacaaactcacaac 16419364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 45 - 91
Target Start/End: Original strand, 67793 - 67839
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatca 91  Q
    |||||||||||||| ||||||||| ||||||| ||||||||||||||    
T  67793 acaaaaataaaacggtattcattcattcaaatcgatagagtatatca 67839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 45 - 91
Target Start/End: Original strand, 3913366 - 3913412
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatca 91  Q
    |||||||||||||||||||||||| ||||||| ||||||||| ||||    
T  3913366 acaaaaataaaacgatattcattcattcaaatcgatagagtacatca 3913412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 45 - 147
Target Start/End: Complemental strand, 25064538 - 25064436
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaaaaataaatttacgaacaaactcgcaacgtc 144  Q
    |||||||||||| ||||||||||| ||||||| || ||| || |||||| |||| || ||||||| ||||  || ||| | ||||||||||| |||| ||    
T  25064538 acaaaaataaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacaacatc 25064439  T
Q  145 caa 147  Q
    |||    
T  25064438 caa 25064436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 45 - 91
Target Start/End: Original strand, 33052960 - 33053006
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatca 91  Q
    ||||||| |||||||||||||||| ||||||||||||||||| ||||    
T  33052960 acaaaaacaaaacgatattcattcattcaaattgatagagtacatca 33053006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 45 - 147
Target Start/End: Complemental strand, 35001892 - 35001790
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaaaaataaatttacgaacaaactcgcaacgtc 144  Q
    |||||||||||| ||||||||||| |||||||  | ||| || |||||| ||||||| ||||||| ||||  || ||| | ||||||||||| |||| ||    
T  35001892 acaaaaataaaatgatattcattcattcaaatcaaaagattacatcattcaacatcgctaaaaacgtaaaggattaatctgcgaacaaactcacaacatc 35001793  T
Q  145 caa 147  Q
    |||    
T  35001792 caa 35001790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 32060174 - 32060138
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgata 81  Q
    |||||||||||||||||||||||| ||||||||||||    
T  32060174 acaaaaataaaacgatattcattcattcaaattgata 32060138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 45 - 136
Target Start/End: Complemental strand, 4088762 - 4088671
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaaaaataaatttacgaacaaactc 136  Q
    ||||||| |||| ||||||||||| |||||||||| ||| ||| ||||| |||| || ||||||| ||||  || ||| | |||||||||||    
T  4088762 acaaaaacaaaatgatattcattcattcaaattgagagattatttcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactc 4088671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 91
Target Start/End: Complemental strand, 127963 - 127917
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatca 91  Q
    |||||||||||||||||||  ||| ||||||||||||||||| ||||    
T  127963 acaaaaataaaacgatatttgttcattcaaattgatagagtacatca 127917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 135
Target Start/End: Original strand, 4984342 - 4984432
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaaaaataaatttacgaacaaact 135  Q
    |||||||||||| ||||||||||| ||||||| || ||| || |||||| |||| || ||||||| ||||  || ||| | ||||||||||    
T  4984342 acaaaaataaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaact 4984432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 12059548 - 12059650
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaaaaataaatttacgaacaaactcgcaacgtc 144  Q
    |||||||||||| ||||||||||| || ||||  | ||| ||||||||| |||| || ||||||| ||||  || ||| | ||||||||||| |||| ||    
T  12059548 acaaaaataaaatgatattcattcatttaaatcaagagattatatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacaacatc 12059647  T
Q  145 caa 147  Q
    |||    
T  12059648 caa 12059650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 91
Target Start/End: Complemental strand, 12170766 - 12170720
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatca 91  Q
    ||||||| |||||||||||||||| ||||||| ||||||||| ||||    
T  12170766 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatca 12170720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 87
Target Start/End: Complemental strand, 19164862 - 19164820
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtat 87  Q
    ||||||| |||||||||||||||| |||||||| |||||||||    
T  19164862 acaaaaacaaaacgatattcattcattcaaattcatagagtat 19164820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 23947092 - 23947194
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaaaaataaatttacgaacaaactcgcaacgtc 144  Q
    ||||||| |||| ||||||||||| ||||||| || ||| || |||||| |||  || ||||||| ||||  || ||| ||||||||||||| |||| ||    
T  23947092 acaaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacgccgctaaaaacgtaaaggatgaatctacgaacaaactcacaacatc 23947191  T
Q  145 caa 147  Q
    |||    
T  23947192 caa 23947194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 83
Target Start/End: Complemental strand, 28981474 - 28981436
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgataga 83  Q
    |||||||||||||||||||||| | ||||||||||||||    
T  28981474 acaaaaataaaacgatattcatacgttcaaattgataga 28981436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 91
Target Start/End: Complemental strand, 30493830 - 30493784
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatca 91  Q
    |||||||||||||| ||||||||| ||||||| |||||| |||||||    
T  30493830 acaaaaataaaacgttattcattcattcaaatagatagaatatatca 30493784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 83
Target Start/End: Complemental strand, 31297117 - 31297079
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgataga 83  Q
    ||||||| |||||||||||||||| ||||||||||||||    
T  31297117 acaaaaacaaaacgatattcattcattcaaattgataga 31297079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 91
Target Start/End: Original strand, 32327012 - 32327058
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatca 91  Q
    ||||||| |||||||||||||||| ||||||| ||||||||| ||||    
T  32327012 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatca 32327058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 102
Target Start/End: Original strand, 33543421 - 33543459
Alignment:
Q  64 cattctttcaaattgatagagtatatcatttaacatcgt 102  Q
    ||||||||||||| |||||||||||||||| ||||||||    
T  33543421 cattctttcaaatcgatagagtatatcattcaacatcgt 33543459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 89
Target Start/End: Complemental strand, 34018856 - 34018814
Alignment:
Q  47 aaaaataaaacgatattcattctttcaaattgatagagtatat 89  Q
    ||||| |||||||||||||||| || |||||||||||||||||    
T  34018856 aaaaacaaaacgatattcattcatttaaattgatagagtatat 34018814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 86
Target Start/End: Complemental strand, 4660897 - 4660857
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagta 86  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  4660897 acaaaaataaa-cgatattcattcattcaaattgatagagta 4660857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 86
Target Start/End: Complemental strand, 5146395 - 5146355
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagta 86  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  5146395 acaaaaataaa-cgatattcattcattcaaattgatagagta 5146355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 11321338 - 11321383
Alignment:
Q  47 aaaaataaaacgatattcattctttcaaattgatagagtatatcat 92  Q
    ||||| ||||||||||| |||| ||||||||||||||||| |||||    
T  11321338 aaaaacaaaacgatatttattcattcaaattgatagagtacatcat 11321383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 12653970 - 12654010
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagta 86  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  12653970 acaaaaataaa-cgatattcattcattcaaattgatagagta 12654010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 15589777 - 15589817
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagta 86  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  15589777 acaaaaataaa-cgatattcattcattcaaattgatagagta 15589817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 19402504 - 19402544
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagta 86  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  19402504 acaaaaataaa-cgatattcattcattcaaattgatagagta 19402544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 86
Target Start/End: Complemental strand, 23654718 - 23654678
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagta 86  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  23654718 acaaaaataaa-cgatattcattcattcaaattgatagagta 23654678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 86
Target Start/End: Complemental strand, 30813526 - 30813486
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagta 86  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  30813526 acaaaaataaa-cgatattcattcattcaaattgatagagta 30813486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 85
Target Start/End: Original strand, 7514995 - 7515035
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagt 85  Q
    ||||||| |||||||||||||||| ||||||| ||||||||    
T  7514995 acaaaaacaaaacgatattcattcattcaaatcgatagagt 7515035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 6e-18; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 45 - 147
Target Start/End: Complemental strand, 17611693 - 17611591
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaaaaataaatttacgaacaaactcgcaacgtc 144  Q
    ||||||| |||||||||||||||| ||||||||||||||||| |||||| ||||| | |||||||||||   || ||| | ||||||||||| |||| ||    
T  17611693 acaaaaacaaaacgatattcattcattcaaattgatagagtacatcattcaacattgctaaaaacataagggatgaatctgcgaacaaactcacaacatc 17611594  T
Q  145 caa 147  Q
    |||    
T  17611593 caa 17611591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 45 - 141
Target Start/End: Complemental strand, 40741868 - 40741772
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaaaaataaatttacgaacaaactcgcaac 141  Q
    |||||||||||| |||||| |||| |||||||||||| |||| ||||||||||||||| |||| | || | ||| ||| ||||||||||||| ||||    
T  40741868 acaaaaataaaatgatattaattcattcaaattgatatagtacatcatttaacatcgtaaaaagcgtagataatgaatctacgaacaaactcacaac 40741772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 156
Target Start/End: Original strand, 32521704 - 32521814
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaaaaataaatttacgaacaaactcgcaacgtc 144  Q
    |||||||||||||||||||||||| ||||||| ||| || || |||||| |||| |||||||| | ||||  || |||||  |||||||||| |||| ||    
T  32521704 acaaaaataaaacgatattcattcattcaaatcgatggattacatcattcaacaccgttaaaatcgtaaaggatgaatttgtgaacaaactcacaacatc 32521803  T
Q  145 caaagttaataa 156  Q
    | ||||||||||    
T  32521804 c-aagttaataa 32521814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 136
Target Start/End: Complemental strand, 35261599 - 35261508
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaaaaataaatttacgaacaaactc 136  Q
    ||||||| | || ||||||||||| ||||||||||||||||| ||||||||||| |  ||||||||||||  || ||| | |||||||||||    
T  35261599 acaaaaacagaatgatattcattcattcaaattgatagagtacatcatttaacaccactaaaaacataaaggatgaatctgcgaacaaactc 35261508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 124
Target Start/End: Original strand, 43369549 - 43369628
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaaaaataaattt 124  Q
    |||||||||||||||||||||||| || ||||||||||| || |||||| || |||| | ||||| ||||  ||||||||    
T  43369549 acaaaaataaaacgatattcattcatttaaattgatagattacatcattcaatatcgctgaaaacgtaaaggataaattt 43369628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 47 - 136
Target Start/End: Original strand, 28407712 - 28407804
Alignment:
Q  47 aaaaataaaacgatattcattctttcaaattgatagagtatatcattt---aacatcgttaaaaacataaaaaataaatttacgaacaaactc 136  Q
    ||||| |||||||||||||||| ||||||||||||||||| ||||  |   ||||||| ||||||||||||   ||||| | |||||||||||    
T  28407712 aaaaacaaaacgatattcattcattcaaattgatagagtacatcaaatacaaacatcgctaaaaacataaagggtaaatctgcgaacaaactc 28407804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 42066837 - 42066939
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaaaaataaatttacgaacaaactcgcaacgtc 144  Q
    ||||||| |||| ||||||||||| ||||||| || ||| || |||||| |||| || ||||||| |||| ||||||| | |||||| |||| |||| ||    
T  42066837 acaaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaagaataaatatgcgaacatactcacaacatc 42066936  T
Q  145 caa 147  Q
    |||    
T  42066937 caa 42066939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 46 - 147
Target Start/End: Original strand, 433467 - 433568
Alignment:
Q  46 caaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaaaaataaatttacgaacaaactcgcaacgtcc 145  Q
    ||||||||||| ||||||||||| ||||||| || ||| || |||||| |||| || ||||||| ||||  || ||| | ||||||||||| |||| |||    
T  433467 caaaaataaaaagatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacaacatcc 433566  T
Q  146 aa 147  Q
    ||    
T  433567 aa 433568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 114
Target Start/End: Original strand, 2843016 - 2843085
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaa 114  Q
    |||||||||||| ||||||||||| |||||||||| ||| || |||||| |||| || ||||||| ||||    
T  2843016 acaaaaataaaatgatattcattcattcaaattgagagattacatcattcaacaccgctaaaaacgtaaa 2843085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 141
Target Start/End: Original strand, 3267009 - 3267108
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatt---taacatcgttaaaaacataaaaaataaatttacgaacaaactcgcaac 141  Q
    ||||||| |||| ||||||||||| ||||||||| |||||||||||| |    ||||||| ||||||| | |||  | ||||||||||||||||| ||||    
T  3267009 acaaaaacaaaatgatattcattcattcaaattgttagagtatatcactcacaaacatcgataaaaacgtcaaatgtgaatttacgaacaaactcacaac 3267108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 114
Target Start/End: Complemental strand, 26584012 - 26583943
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaa 114  Q
    |||||||||||| ||||||||||| ||||||| |  ||| || |||||| ||||||||||||||| ||||    
T  26584012 acaaaaataaaatgatattcattcattcaaatcgtgagattacatcattcaacatcgttaaaaacgtaaa 26583943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 91
Target Start/End: Original strand, 25286982 - 25287026
Alignment:
Q  47 aaaaataaaacgatattcattctttcaaattgatagagtatatca 91  Q
    ||||||||||||||||| |||| ||||||||||||||||| ||||    
T  25286982 aaaaataaaacgatatttattcattcaaattgatagagtacatca 25287026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 85
Target Start/End: Original strand, 44311580 - 44311620
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagt 85  Q
    |||| ||||||||||||||||||| ||||||||||||||||    
T  44311580 acaataataaaacgatattcattcgttcaaattgatagagt 44311620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 54 - 89
Target Start/End: Complemental strand, 10094901 - 10094866
Alignment:
Q  54 aaacgatattcattctttcaaattgatagagtatat 89  Q
    ||||||||||||||| ||||||||||||||||||||    
T  10094901 aaacgatattcattcattcaaattgatagagtatat 10094866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 45 - 155
Target Start/End: Original strand, 12141099 - 12141212
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcattt---aacatcgttaaaaacataaaaaataaatttacgaacaaactcgcaac 141  Q
    ||||||| |||||||||||||||| ||||||| ||||||||| ||||  |   ||||||| ||||||| |||||  | ||| | ||||||||||| ||||    
T  12141099 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaaacatcgctaaaaacgtaaaaggtgaatatgcgaacaaactcacaac 12141198  T
Q  142 gtccaaagttaata 155  Q
      || |||||||||    
T  12141199 aacccaagttaata 12141212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 190 - 245
Target Start/End: Complemental strand, 35339158 - 35339103
Alignment:
Q  190 tgttataaataattaacttggtggatgttcatcattagtcttccaccttccaataa 245  Q
    |||||| ||| ||||| || |||||||| |||||||||||||||||||||| ||||    
T  35339158 tgttatgaattattaatttagtggatgtccatcattagtcttccaccttcctataa 35339103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 45 - 112
Target Start/End: Original strand, 46818179 - 46818246
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacata 112  Q
    ||||||| ||||||||||||||   ||||||| |||||| || |||||| |||| |||||||||||||    
T  46818179 acaaaaacaaaacgatattcataaattcaaatcgatagattacatcattcaacaccgttaaaaacata 46818246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 45 - 88
Target Start/End: Original strand, 48316611 - 48316654
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtata 88  Q
    ||||||| |||||||||||||||| ||||||| |||||||||||    
T  48316611 acaaaaacaaaacgatattcattcattcaaatcgatagagtata 48316654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 91
Target Start/End: Original strand, 9977002 - 9977048
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatca 91  Q
    ||||||| |||||||||||||||| || |||||||||||||| ||||    
T  9977002 acaaaaacaaaacgatattcattcatttaaattgatagagtacatca 9977048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 91
Target Start/End: Original strand, 28044548 - 28044594
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatca 91  Q
    ||||||| |||||||||||||||| ||||||| ||||||||| ||||    
T  28044548 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatca 28044594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 135
Target Start/End: Complemental strand, 32684970 - 32684880
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaaaaataaatttacgaacaaact 135  Q
    ||||||| |||| ||||||||||| ||||||| || ||| || |||||| |||| || ||||||| ||||  || ||| ||||||||||||    
T  32684970 acaaaaacaaaatgatattcattcattcaaatcgagagactacatcattcaacaccgctaaaaacgtaaaggatgaatctacgaacaaact 32684880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 91
Target Start/End: Original strand, 34899399 - 34899445
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatca 91  Q
    |||||||||||| |||||| |||| ||||||||||||||||| ||||    
T  34899399 acaaaaataaaatgatatttattcattcaaattgatagagtacatca 34899445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 90
Target Start/End: Complemental strand, 40762055 - 40762013
Alignment:
Q  48 aaaataaaacgatattcattctttcaaattgatagagtatatc 90  Q
    |||| |||||||||||||||  |||||||||||||||||||||    
T  40762055 aaaaaaaaacgatattcatttattcaaattgatagagtatatc 40762013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 91
Target Start/End: Complemental strand, 48061721 - 48061675
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatca 91  Q
    ||||||| |||||||||||||||| ||||||| ||||||||| ||||    
T  48061721 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatca 48061675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 114
Target Start/End: Original strand, 1485031 - 1485100
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaa 114  Q
    |||||||||||| ||||||||||| ||||||| || ||| || |||||| |||| || ||||||| ||||    
T  1485031 acaaaaataaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaa 1485100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 86
Target Start/End: Complemental strand, 2623061 - 2623021
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagta 86  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  2623061 acaaaaataaa-cgatattcattcattcaaattgatagagta 2623021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 4621032 - 4621072
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagta 86  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  4621032 acaaaaataaa-cgatattcattcattcaaattgatagagta 4621072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 85
Target Start/End: Original strand, 8001341 - 8001378
Alignment:
Q  48 aaaataaaacgatattcattctttcaaattgatagagt 85  Q
    ||||||||||||||||||||| ||||||| ||||||||    
T  8001341 aaaataaaacgatattcattcattcaaatcgatagagt 8001378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 54 - 91
Target Start/End: Original strand, 15670470 - 15670507
Alignment:
Q  54 aaacgatattcattctttcaaattgatagagtatatca 91  Q
    ||||||||||||||| ||||||||||| ||||||||||    
T  15670470 aaacgatattcattcattcaaattgattgagtatatca 15670507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 86
Target Start/End: Complemental strand, 21991131 - 21991091
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagta 86  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  21991131 acaaaaataaa-cgatattcattcattcaaattgatagagta 21991091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 90
Target Start/End: Complemental strand, 23808795 - 23808751
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatc 90  Q
    ||||||||||| |||||||||||| |||||||||| ||||||||||    
T  23808795 acaaaaataaa-cgatattcattcattcaaattgagagagtatatc 23808751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 90
Target Start/End: Complemental strand, 32741212 - 32741168
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatc 90  Q
    ||||||||||| |||||||||||  |||||||||||||||||||||    
T  32741212 acaaaaataaa-cgatattcatttattcaaattgatagagtatatc 32741168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 86
Target Start/End: Complemental strand, 38277266 - 38277226
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagta 86  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  38277266 acaaaaataaa-cgatattcattcattcaaattgatagagta 38277226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 90
Target Start/End: Complemental strand, 43847442 - 43847398
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatc 90  Q
    |||||||||||  ||||||||||| |||||||||||||||||||||    
T  43847442 acaaaaataaat-gatattcattcattcaaattgatagagtatatc 43847398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 44482530 - 44482570
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagta 86  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  44482530 acaaaaataaa-cgatattcattcattcaaattgatagagta 44482570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 136
Target Start/End: Original strand, 46244043 - 46244131
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaaaaataaatttacgaacaaactc 136  Q
    ||||||| ||||||||||||||||    ||||| |||||||| ||||||||| |||| ||||||| |||| ||| ||| | | |||||||||    
T  46244043 acaaaaacaaaacgatattcattc---aaaattaatagagtacatcatttaatatcgctaaaaacgtaaataatgaatctgcaaacaaactc 46244131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 48643478 - 48643518
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagta 86  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  48643478 acaaaaataaa-cgatattcattcattcaaattgatagagta 48643518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 8180262 - 8180230
Alignment:
Q  54 aaacgatattcattctttcaaattgatagagta 86  Q
    ||||||||||||||| |||||||||||||||||    
T  8180262 aaacgatattcattcattcaaattgatagagta 8180230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 11833479 - 11833447
Alignment:
Q  54 aaacgatattcattctttcaaattgatagagta 86  Q
    ||||||||||||||| |||||||||||||||||    
T  11833479 aaacgatattcattcattcaaattgatagagta 11833447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 86
Target Start/End: Original strand, 17473425 - 17473453
Alignment:
Q  58 gatattcattctttcaaattgatagagta 86  Q
    |||||||||||||||||||||||||||||    
T  17473425 gatattcattctttcaaattgatagagta 17473453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 86
Target Start/End: Complemental strand, 17579789 - 17579761
Alignment:
Q  58 gatattcattctttcaaattgatagagta 86  Q
    |||||||||||||||||||||||||||||    
T  17579789 gatattcattctttcaaattgatagagta 17579761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 101
Target Start/End: Complemental strand, 20083640 - 20083584
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcg 101  Q
    ||||||| |||| |||||| |||| ||||||| |||| |||| ||||||||||||||    
T  20083640 acaaaaacaaaatgatatttattcattcaaatcgatatagtacatcatttaacatcg 20083584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 55 - 91
Target Start/End: Complemental strand, 21603918 - 21603882
Alignment:
Q  55 aacgatattcattctttcaaattgatagagtatatca 91  Q
    |||||||||||||| ||||||||||||||||| ||||    
T  21603918 aacgatattcattcattcaaattgatagagtacatca 21603882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 24610051 - 24610087
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgata 81  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  24610051 acaaaaataaaatgatattcattcattcaaattgata 24610087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 25854886 - 25854918
Alignment:
Q  54 aaacgatattcattctttcaaattgatagagta 86  Q
    ||||||||||||||| |||||||||||||||||    
T  25854886 aaacgatattcattcattcaaattgatagagta 25854918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 114
Target Start/End: Complemental strand, 36144050 - 36143977
Alignment:
Q  45 acaaaaataaaacgatattcattctttca----aattgatagagtatatcatttaacatcgttaaaaacataaa 114  Q
    ||||||||||||| |||||||||  ||||    ||||||||||||| |||||| |||| || ||||||||||||    
T  36144050 acaaaaataaaacaatattcatttattcatccaaattgatagagtacatcattcaacaccgctaaaaacataaa 36143977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 36579001 - 36579033
Alignment:
Q  54 aaacgatattcattctttcaaattgatagagta 86  Q
    ||||||||||||||| |||||||||||||||||    
T  36579001 aaacgatattcattcgttcaaattgatagagta 36579033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 37375716 - 37375748
Alignment:
Q  54 aaacgatattcattctttcaaattgatagagta 86  Q
    ||||||||||||||| |||||||||||||||||    
T  37375716 aaacgatattcattcattcaaattgatagagta 37375748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 85
Target Start/End: Complemental strand, 39707737 - 39707698
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagt 85  Q
    ||||||||||| |||||||||||| ||||||||||||||||    
T  39707737 acaaaaataaa-cgatattcattcattcaaattgatagagt 39707698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 1e-16; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 45 - 141
Target Start/End: Original strand, 34680663 - 34680759
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaaaaataaatttacgaacaaactcgcaac 141  Q
    |||||||||||| ||||||||||| |||||||||||| | || || |||||||||| |||||||||||||  |||||| | |||| |||||| ||||    
T  34680663 acaaaaataaaatgatattcattcattcaaattgatataatacattatttaacatcattaaaaacataaatgataaatctgcgaataaactcacaac 34680759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 45 - 91
Target Start/End: Original strand, 19443843 - 19443889
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatca 91  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||    
T  19443843 acaaaaataaaacgatattcattcattcaaattgatagagtacatca 19443889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 45 - 114
Target Start/End: Complemental strand, 12654372 - 12654303
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaa 114  Q
    |||||||||||| |||||| |||| ||||||| |||| | || |||||||||||||||||||||| ||||    
T  12654372 acaaaaataaaatgatatttattcattcaaatcgatataatacatcatttaacatcgttaaaaacgtaaa 12654303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 45 - 147
Target Start/End: Complemental strand, 34612113 - 34612011
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaaaaataaatttacgaacaaactcgcaacgtc 144  Q
    |||||||||||| ||||||||||| || |||| || ||| || |||||| ||||||  ||||||| |||| ||| ||| | ||||||||||| |||| ||    
T  34612113 acaaaaataaaatgatattcattcattaaaatcgagagattacatcattgaacatcactaaaaacgtaaagaatgaatctgcgaacaaactcacaacatc 34612014  T
Q  145 caa 147  Q
    |||    
T  34612013 caa 34612011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 93
Target Start/End: Original strand, 15596946 - 15596991
Alignment:
Q  48 aaaataaaacgatattcattctttcaaattgatagagtatatcatt 93  Q
    |||| |||||||||||||||| |||||||||||||||||| |||||    
T  15596946 aaaacaaaacgatattcattcattcaaattgatagagtatgtcatt 15596991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 100
Target Start/End: Complemental strand, 16644777 - 16644724
Alignment:
Q  48 aaaataaaacgatattcattc-tttcaaattgatagagtatatcatttaacatc 100  Q
    |||| |||| ||||||||||| ||||||||||||||||||||||||| ||||||    
T  16644777 aaaacaaaatgatattcattcatttcaaattgatagagtatatcattcaacatc 16644724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 90
Target Start/End: Complemental strand, 37613105 - 37613061
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatc 90  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||    
T  37613105 acaaaaataaa-cgatattcattcattcaaattgatagagtatatc 37613061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 90
Target Start/End: Original strand, 39067350 - 39067394
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatc 90  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||    
T  39067350 acaaaaataaa-cgatattcattcttttaaattgatagagtatatc 39067394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 141
Target Start/End: Complemental strand, 4809273 - 4809177
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaaaaataaatttacgaacaaactcgcaac 141  Q
    |||||||||||| ||||||||||| ||||||| || ||| || |||||| |||| || ||||||| ||||  || ||| | ||||||||||| ||||    
T  4809273 acaaaaataaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacaac 4809177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 85
Target Start/End: Original strand, 20227067 - 20227107
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagt 85  Q
    |||| ||||||||||||||||||| ||||||||||||||||    
T  20227067 acaataataaaacgatattcattcgttcaaattgatagagt 20227107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 90
Target Start/End: Original strand, 38545484 - 38545520
Alignment:
Q  54 aaacgatattcattctttcaaattgatagagtatatc 90  Q
    ||||||||||||||| |||||||||||||||||||||    
T  38545484 aaacgatattcattcattcaaattgatagagtatatc 38545520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 45 - 136
Target Start/End: Complemental strand, 29777528 - 29777437
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaaaaataaatttacgaacaaactc 136  Q
    |||||||||||| ||||||||||| ||||||| || ||| || |||||| |||| || ||||||| ||||  || ||| | |||||||||||    
T  29777528 acaaaaataaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactc 29777437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 45 - 136
Target Start/End: Original strand, 39152917 - 39153008
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaaaaataaatttacgaacaaactc 136  Q
    |||||||||||||||||||||||| ||||||| |||| |||| || ||| ||||  | ||||||| ||||  || ||| | |||||||||||    
T  39152917 acaaaaataaaacgatattcattcattcaaatcgataaagtacattattcaacactgctaaaaacgtaaaggatgaatctgcgaacaaactc 39153008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 91
Target Start/End: Original strand, 9637199 - 9637245
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatca 91  Q
    ||||||| |||||||||||||||| || |||||||||||||| ||||    
T  9637199 acaaaaacaaaacgatattcattcatttaaattgatagagtacatca 9637245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 87
Target Start/End: Complemental strand, 10377973 - 10377931
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtat 87  Q
    ||||||| |||||||||||||||| ||||||| ||||||||||    
T  10377973 acaaaaacaaaacgatattcattcattcaaatcgatagagtat 10377931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 91
Target Start/End: Original strand, 17693403 - 17693449
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatca 91  Q
    ||||||| ||||||||||||||||  |||||||||||||||| ||||    
T  17693403 acaaaaacaaaacgatattcattcactcaaattgatagagtacatca 17693449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 91
Target Start/End: Original strand, 27498156 - 27498202
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatca 91  Q
    ||||||||||||  |||||||||| ||||||||||||||||| ||||    
T  27498156 acaaaaataaaataatattcattcattcaaattgatagagtacatca 27498202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 83
Target Start/End: Original strand, 40618863 - 40618901
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgataga 83  Q
    ||||||| |||||||||||||||| ||||||||||||||    
T  40618863 acaaaaacaaaacgatattcattcattcaaattgataga 40618901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 2234130 - 2234170
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagta 86  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  2234130 acaaaaataaa-cgatattcattcattcaaattgatagagta 2234170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 114
Target Start/End: Complemental strand, 9073027 - 9072958
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaa 114  Q
    |||||||||||| ||||||||||| ||||||| || ||| || |||||| |||| || ||||||| ||||    
T  9073027 acaaaaataaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaa 9072958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 90
Target Start/End: Original strand, 13570427 - 13570471
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatc 90  Q
    ||||||||||| |||||||||||| || ||||||||||||||||||    
T  13570427 acaaaaataaa-cgatattcattcatttaaattgatagagtatatc 13570471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 91
Target Start/End: Original strand, 14544681 - 14544714
Alignment:
Q  58 gatattcattctttcaaattgatagagtatatca 91  Q
    ||||||||||| ||||||||||||||||||||||    
T  14544681 gatattcattcattcaaattgatagagtatatca 14544714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 24790830 - 24790870
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagta 86  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  24790830 acaaaaataaa-cgatattcattcattcaaattgatagagta 24790870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 86
Target Start/End: Complemental strand, 31202917 - 31202877
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagta 86  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  31202917 acaaaaataaa-cgatattcattcattcaaattgatagagta 31202877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 46 - 91
Target Start/End: Original strand, 40211091 - 40211136
Alignment:
Q  46 caaaaataaaacgatattcattctttcaaattgatagagtatatca 91  Q
    |||||| |||||||||||||||| ||||||| ||||||||| ||||    
T  40211091 caaaaacaaaacgatattcattcattcaaatcgatagagtacatca 40211136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 54 - 91
Target Start/End: Complemental strand, 41362194 - 41362157
Alignment:
Q  54 aaacgatattcattctttcaaattgatagagtatatca 91  Q
    ||||||||||||||| ||||||||||||||||| ||||    
T  41362194 aaacgatattcattcattcaaattgatagagtacatca 41362157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 1809906 - 1809938
Alignment:
Q  54 aaacgatattcattctttcaaattgatagagta 86  Q
    ||||||||||||||| |||||||||||||||||    
T  1809906 aaacgatattcattcattcaaattgatagagta 1809938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 2968976 - 2968944
Alignment:
Q  54 aaacgatattcattctttcaaattgatagagta 86  Q
    ||||||||||||||| |||||||||||||||||    
T  2968976 aaacgatattcattcattcaaattgatagagta 2968944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 3673740 - 3673704
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgata 81  Q
    ||||||| |||||||||||||||| ||||||||||||    
T  3673740 acaaaaacaaaacgatattcattcattcaaattgata 3673704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 4757609 - 4757577
Alignment:
Q  54 aaacgatattcattctttcaaattgatagagta 86  Q
    ||||||||||||||| |||||||||||||||||    
T  4757609 aaacgatattcattcattcaaattgatagagta 4757577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 9502029 - 9501997
Alignment:
Q  54 aaacgatattcattctttcaaattgatagagta 86  Q
    ||||||||||||||| |||||||||||||||||    
T  9502029 aaacgatattcattcattcaaattgatagagta 9501997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 114
Target Start/End: Complemental strand, 19876506 - 19876438
Alignment:
Q  46 caaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaa 114  Q
    ||||||||||| |||||| |||| |||||||||| ||| || |||||| |||| || ||||||| ||||    
T  19876506 caaaaataaaatgatatttattcattcaaattgagagattacatcattcaacaccgctaaaaacgtaaa 19876438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 114
Target Start/End: Complemental strand, 21238086 - 21238015
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcat--ttaacatcgttaaaaacataaa 114  Q
    ||||||| ||||| |||||||||| |||||||||||||| || |||||  | ||||||| ||||||| ||||    
T  21238086 acaaaaacaaaacaatattcattcattcaaattgatagaatacatcataatcaacatcgctaaaaacgtaaa 21238015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 30026542 - 30026585
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatat 89  Q
    ||||||||||| ||||||| |||| ||||||||||||||||||||    
T  30026542 acaaaaataaa-cgatatttattcattcaaattgatagagtatat 30026585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 147
Target Start/End: Original strand, 32724258 - 32724358
Alignment:
Q  47 aaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaaaaataaatttacgaacaaactcgcaacgtcca 146  Q
    ||||||||||  |||||||||| ||  ||| || ||| || |||||| |||| || ||||||| ||||  |||||| ||||||||||||| |||| ||||    
T  32724258 aaaaataaaattatattcattcatttgaatcgagagattacatcattcaacaccgctaaaaacgtaaaggataaatctacgaacaaactcacaacatcca 32724357  T
Q  147 a 147  Q
    |    
T  32724358 a 32724358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 81
Target Start/End: Complemental strand, 34493304 - 34493276
Alignment:
Q  53 aaaacgatattcattctttcaaattgata 81  Q
    |||||||||||||||||||||||||||||    
T  34493304 aaaacgatattcattctttcaaattgata 34493276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 4e-16; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 45 - 111
Target Start/End: Complemental strand, 42886800 - 42886733
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaatt-gatagagtatatcatttaacatcgttaaaaacat 111  Q
    ||||||| ||||||||||||||||||||||| | ||||||||||||||||||||| | ||||||||||    
T  42886800 acaaaaagaaaacgatattcattctttcaaaatcgatagagtatatcatttaacaccattaaaaacat 42886733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 45 - 141
Target Start/End: Original strand, 36057103 - 36057199
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaaaaataaatttacgaacaaactcgcaac 141  Q
    |||||||||||| ||||||||||| ||||||| |||| | || || |||||||||| |||||||| ||||  |||||| | ||||||||||| ||||    
T  36057103 acaaaaataaaatgatattcattcattcaaatcgatataatacattatttaacatcattaaaaacgtaaatgataaatctgcgaacaaactcacaac 36057199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 136
Target Start/End: Original strand, 7150110 - 7150201
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaaaaataaatttacgaacaaactc 136  Q
    |||||||||||| ||||||||||| ||||||| || ||| ||||||||| |||| || ||||||| |||| || |||| | |||||||||||    
T  7150110 acaaaaataaaatgatattcattcattcaaatcgagagattatatcattcaacaccgctaaaaacgtaaagaacaaatctgcgaacaaactc 7150201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 45 - 91
Target Start/End: Complemental strand, 26825726 - 26825680
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatca 91  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||    
T  26825726 acaaaaataaaacgatattcattcattcaaatcgatagagtatatca 26825680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 41418204 - 41418305
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaaaaataaatttacgaacaaactcgcaacgtc 144  Q
    ||||||| ||||||||||| |||| ||||||||||||||||| |||||||||||||||  |||||  |||| || | | | ||||||||||| |||| ||    
T  41418204 acaaaaacaaaacgatatt-attcattcaaattgatagagtacatcatttaacatcgtggaaaactaaaaagatgattctgcgaacaaactcacaacatc 41418302  T
Q  145 caa 147  Q
    |||    
T  41418303 caa 41418305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 47 - 114
Target Start/End: Complemental strand, 11192668 - 11192603
Alignment:
Q  47 aaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaa 114  Q
    ||||||||||  |||||||||| ||||||||||||||  ||||||||||| |||||||||||| ||||    
T  11192668 aaaaataaaa--atattcattcattcaaattgatagaaaatatcatttaatatcgttaaaaacgtaaa 11192603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 47 - 147
Target Start/End: Original strand, 35475115 - 35475215
Alignment:
Q  47 aaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaaaaataaatttacgaacaaactcgcaacgtcca 146  Q
    |||||||||| ||||||||||| |||||||||| ||| || |||||| |||| || ||||||| ||||  || ||| |||||||| |||| |||| ||||    
T  35475115 aaaaataaaatgatattcattcattcaaattgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatatacgaacatactcacaacatcca 35475214  T
Q  147 a 147  Q
    |    
T  35475215 a 35475215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 114
Target Start/End: Original strand, 20257473 - 20257540
Alignment:
Q  47 aaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaa 114  Q
    ||||| |||||||||||||||  ||||||| |||||| ||||||||| ||||||| ||||||| ||||    
T  20257473 aaaaacaaaacgatattcattaattcaaatcgatagattatatcattcaacatcgctaaaaacgtaaa 20257540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 245
Target Start/End: Complemental strand, 21575106 - 21575051
Alignment:
Q  190 tgttataaataattaacttggtggatgttcatcattagtcttccaccttccaataa 245  Q
    |||||||||||| |||||| |||||||| |||| ||||||||||||||||| ||||    
T  21575106 tgttataaataaataacttagtggatgtccatccttagtcttccaccttcctataa 21575051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 47 - 89
Target Start/End: Complemental strand, 4771150 - 4771108
Alignment:
Q  47 aaaaataaaacgatattcattctttcaaattgatagagtatat 89  Q
    ||||| |||||||||||||||| ||||||||||||||||||||    
T  4771150 aaaaacaaaacgatattcattcattcaaattgatagagtatat 4771108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 45 - 91
Target Start/End: Complemental strand, 13007525 - 13007479
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatca 91  Q
    ||||||| |||||||||||||||| ||||||||||||||||| ||||    
T  13007525 acaaaaacaaaacgatattcattcattcaaattgatagagtacatca 13007479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 114
Target Start/End: Complemental strand, 10649946 - 10649877
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaa 114  Q
    |||||||||||| ||||||||||| ||||||| || ||| || |||||| |||| |||||||||| ||||    
T  10649946 acaaaaataaaatgatattcattcattcaaatcgagagattacatcattcaacaccgttaaaaacgtaaa 10649877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 6217194 - 6217158
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgata 81  Q
    |||||||||||||||||||||||| ||||||||||||    
T  6217194 acaaaaataaaacgatattcattcattcaaattgata 6217158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 90
Target Start/End: Complemental strand, 6281505 - 6281469
Alignment:
Q  54 aaacgatattcattctttcaaattgatagagtatatc 90  Q
    ||||||||||||||| |||||||||||||||||||||    
T  6281505 aaacgatattcattcattcaaattgatagagtatatc 6281469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 45 - 136
Target Start/End: Complemental strand, 7242088 - 7241997
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaaaaataaatttacgaacaaactc 136  Q
    |||||||||||| ||||||||||| ||||||| || ||| || |||||| |||| || ||||||| ||||  || ||| | |||||||||||    
T  7242088 acaaaaataaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactc 7241997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 45 - 136
Target Start/End: Complemental strand, 7247263 - 7247172
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaaaaataaatttacgaacaaactc 136  Q
    |||||||||||| ||||||||||| ||||||| || ||| || |||||| |||| || ||||||| ||||  || ||| | |||||||||||    
T  7247263 acaaaaataaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactc 7247172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 91
Target Start/End: Original strand, 6011930 - 6011976
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatca 91  Q
    ||||||| |||||||||||||||| ||||||| ||||||||| ||||    
T  6011930 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatca 6011976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 83
Target Start/End: Original strand, 8984781 - 8984819
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgataga 83  Q
    ||||||| |||||||||||||||| ||||||||||||||    
T  8984781 acaaaaacaaaacgatattcattcattcaaattgataga 8984819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 91
Target Start/End: Original strand, 9113517 - 9113563
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatca 91  Q
    ||||||| |||||||||||||||| ||||||| ||||||||| ||||    
T  9113517 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatca 9113563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 147
Target Start/End: Complemental strand, 16981596 - 16981494
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaaaaataaatttacgaacaaactcgcaacgtc 144  Q
    |||||||||||| ||||||||||  ||||||| || | | || |||||| |||| || ||||||| |||| ||| ||| | ||||||||||| |||| ||    
T  16981596 acaaaaataaaatgatattcatttattcaaatcgagatattacatcattcaacaccgctaaaaacgtaaagaatgaatctgcgaacaaactcacaacatc 16981497  T
Q  145 caa 147  Q
    |||    
T  16981496 caa 16981494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 21060058 - 21060160
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaaaaataaatttacgaacaaactcgcaacgtc 144  Q
    ||||||| |||| ||||||||||| ||||||| || ||| || |||||| |||| || ||||||| ||||  || ||| |||||||| |||| |||| ||    
T  21060058 acaaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctacgaacatactcacaacatc 21060157  T
Q  145 caa 147  Q
    |||    
T  21060158 caa 21060160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 91
Target Start/End: Original strand, 24229576 - 24229622
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatca 91  Q
    ||||||| |||||||||||||||| ||||||| ||||||||| ||||    
T  24229576 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatca 24229622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 91
Target Start/End: Complemental strand, 25980445 - 25980407
Alignment:
Q  53 aaaacgatattcattctttcaaattgatagagtatatca 91  Q
    |||||||||||||||| ||||||| ||||||||||||||    
T  25980445 aaaacgatattcattcattcaaatcgatagagtatatca 25980407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 147
Target Start/End: Complemental strand, 34882021 - 34881919
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaaaaataaatttacgaacaaactcgcaacgtc 144  Q
    ||||||| |||| ||||||||||| ||||||| || ||| || |||||| |||| || ||||||||||||  || ||| | | ||||||||| |||| ||    
T  34882021 acaaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacataaaggatgaatctgcaaacaaactcacaacatc 34881922  T
Q  145 caa 147  Q
    |||    
T  34881921 caa 34881919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 91
Target Start/End: Original strand, 42505065 - 42505110
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatca 91  Q
    ||||||||||| |||||||||||| ||||||||||||||||| ||||    
T  42505065 acaaaaataaa-cgatattcattcattcaaattgatagagtacatca 42505110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 147
Target Start/End: Complemental strand, 43149031 - 43148929
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaaaaataaatttacgaacaaactcgcaacgtc 144  Q
    ||||||||| || ||||||||||| ||||||| || ||| ||||||||| |||| || ||||||  ||||  || ||| | ||||||||||| |||| ||    
T  43149031 acaaaaatacaatgatattcattcattcaaatcgagagattatatcattcaacaccgctaaaaatgtaaaggatgaatctgcgaacaaactcacaacatc 43148932  T
Q  145 caa 147  Q
    |||    
T  43148931 caa 43148929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 9196683 - 9196723
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagta 86  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  9196683 acaaaaataaa-cgatattcattcattcaaattgatagagta 9196723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 86
Target Start/End: Complemental strand, 17331797 - 17331757
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagta 86  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  17331797 acaaaaataaa-cgatattcattcattcaaattgatagagta 17331757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 114
Target Start/End: Original strand, 19280712 - 19280781
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaa 114  Q
    |||||||||||| ||||||||||| ||||||| || ||| || || ||| |||| || ||||||||||||    
T  19280712 acaaaaataaaatgatattcattcattcaaatcgagagattacattattcaacaccgctaaaaacataaa 19280781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 23881768 - 23881808
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagta 86  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  23881768 acaaaaataaa-cgatattcattcattcaaattgatagagta 23881808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 90
Target Start/End: Original strand, 26294726 - 26294770
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatc 90  Q
    ||||||||||| || ||||||||| |||||||||||||||||||||    
T  26294726 acaaaaataaa-cggtattcattcattcaaattgatagagtatatc 26294770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 86
Target Start/End: Complemental strand, 34431533 - 34431493
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagta 86  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  34431533 acaaaaataaa-cgatattcattcattcaaattgatagagta 34431493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 39531060 - 39531100
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagta 86  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  39531060 acaaaaataaa-cgatattcattcattcaaattgatagagta 39531100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 586201 - 586169
Alignment:
Q  54 aaacgatattcattctttcaaattgatagagta 86  Q
    ||||||||||||||| |||||||||||||||||    
T  586201 aaacgatattcattcattcaaattgatagagta 586169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 3740793 - 3740761
Alignment:
Q  54 aaacgatattcattctttcaaattgatagagta 86  Q
    ||||||||||||||| |||||||||||||||||    
T  3740793 aaacgatattcattcattcaaattgatagagta 3740761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 141
Target Start/End: Original strand, 7612834 - 7612929
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaaaaataaatttacgaacaaactcgcaac 141  Q
    ||||||| |||||||||||||||  ||||  | ||||||||  |||||| |||| || ||||||| ||||| || ||||| ||||||||||| ||||    
T  7612834 acaaaaacaaaacgatattcatttattcat-tcgatagagttcatcattcaacaccgctaaaaacgtaaaagatgaatttgcgaacaaactcacaac 7612929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 90
Target Start/End: Complemental strand, 28041086 - 28041054
Alignment:
Q  58 gatattcattctttcaaattgatagagtatatc 90  Q
    ||||||||||| |||||||||||||||||||||    
T  28041086 gatattcattcattcaaattgatagagtatatc 28041054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 190 - 238
Target Start/End: Complemental strand, 29681839 - 29681791
Alignment:
Q  190 tgttataaataattaacttggtggatgttcatcattagtcttccacctt 238  Q
    |||||| |||||| ||||| ||||||||||||| ||| |||||||||||    
T  29681839 tgttatgaataataaacttagtggatgttcatctttaatcttccacctt 29681791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 90
Target Start/End: Original strand, 42396170 - 42396206
Alignment:
Q  54 aaacgatattcattctttcaaattgatagagtatatc 90  Q
    ||||||||||||||| |||||||||||||| ||||||    
T  42396170 aaacgatattcattcattcaaattgatagaatatatc 42396206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 4e-16; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 45 - 141
Target Start/End: Complemental strand, 35175699 - 35175601
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcat--ttaacatcgttaaaaacataaaaaataaatttacgaacaaactcgcaac 141  Q
    |||||||||||||||||||||||| |||||||||||||| || |||||  | ||||||| ||||||| ||||| || ||| | ||||||||||| ||||    
T  35175699 acaaaaataaaacgatattcattcattcaaattgatagaatacatcataatcaacatcgctaaaaacgtaaaagatgaatctgcgaacaaactcacaac 35175601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 45 - 141
Target Start/End: Complemental strand, 40487621 - 40487522
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcattt---aacatcgttaaaaacataaaaaataaatttacgaacaaactcgcaac 141  Q
    ||||||| |||||||||||||||| ||||||| ||||||||||||||  |   ||||||| |||||||||||| | | ||||| ||||||||||| ||||    
T  40487621 acaaaaacaaaacgatattcattcattcaaatcgatagagtatatcagatacaaacatcgctaaaaacataaagagtgaatttgcgaacaaactcacaac 40487522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 136
Target Start/End: Complemental strand, 46178867 - 46178776
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaaaaataaatttacgaacaaactc 136  Q
    ||||||| |||||||| ||||||| ||||||| |||| | ||||||||| |||| |||||||||| ||||| |||||  | |||||||||||    
T  46178867 acaaaaacaaaacgattttcattcattcaaatcgatatattatatcattcaacaccgttaaaaacgtaaaagataaaactgcgaacaaactc 46178776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 45 - 91
Target Start/End: Complemental strand, 10229772 - 10229726
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatca 91  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||    
T  10229772 acaaaaataaaacgatattcattcattcaaatcgatagagtatatca 10229726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 45 - 147
Target Start/End: Complemental strand, 12116397 - 12116295
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaaaaataaatttacgaacaaactcgcaacgtc 144  Q
    |||||||||||| ||||||||||| ||||||| || ||| || |||||| ||||||| ||||||| ||||  || ||| || |||||||||| |||| ||    
T  12116397 acaaaaataaaatgatattcattcattcaaatcgagagattacatcattcaacatcgctaaaaacgtaaaggatgaatctaagaacaaactcacaacatc 12116298  T
Q  145 caa 147  Q
    |||    
T  12116297 caa 12116295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 45 - 147
Target Start/End: Complemental strand, 46934938 - 46934836
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaaaaataaatttacgaacaaactcgcaacgtc 144  Q
    |||||||||||| ||||||||||| ||||||| || ||| |  |||||| ||||||| ||||||| ||||  || ||| ||||||||||||| |||| ||    
T  46934938 acaaaaataaaatgatattcattcattcaaatcgagagattgcatcattcaacatcgctaaaaacgtaaaggatgaatctacgaacaaactcacaacatc 46934839  T
Q  145 caa 147  Q
    |||    
T  46934838 caa 46934836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 100
Target Start/End: Complemental strand, 21488392 - 21488337
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatc 100  Q
    |||||||||||| ||||||||||  |||||||  ||||||||||||||||||||||    
T  21488392 acaaaaataaaatgatattcatttattcaaatcaatagagtatatcatttaacatc 21488337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 108
Target Start/End: Complemental strand, 30830268 - 30830205
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaa 108  Q
    ||||||| ||||||||||||||||||||||||| ||| |||| ||| || |||||| |||||||    
T  30830268 acaaaaacaaaacgatattcattctttcaaattcatatagtacatcgttcaacatccttaaaaa 30830205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 45 - 91
Target Start/End: Complemental strand, 9998763 - 9998717
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatca 91  Q
    |||||||||||||||||||||||| ||||||| ||||||||| ||||    
T  9998763 acaaaaataaaacgatattcattcattcaaatcgatagagtacatca 9998717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 45 - 91
Target Start/End: Complemental strand, 10108532 - 10108486
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatca 91  Q
    |||||||||||||||||||||||| ||||||| ||||||||| ||||    
T  10108532 acaaaaataaaacgatattcattcattcaaatcgatagagtacatca 10108486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 45 - 91
Target Start/End: Complemental strand, 10233366 - 10233320
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatca 91  Q
    |||||||||||||||||||||||| ||||||| ||||||||| ||||    
T  10233366 acaaaaataaaacgatattcattcattcaaatcgatagagtacatca 10233320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 45 - 91
Target Start/End: Complemental strand, 21313332 - 21313286
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatca 91  Q
    ||||||| |||||||||||||||| ||||||||||| ||||||||||    
T  21313332 acaaaaacaaaacgatattcattcattcaaattgattgagtatatca 21313286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 45 - 91
Target Start/End: Original strand, 35864753 - 35864799
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatca 91  Q
    |||||||||||||||||||| ||| ||||||||||||||||| ||||    
T  35864753 acaaaaataaaacgatattcgttcattcaaattgatagagtacatca 35864799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 45 - 91
Target Start/End: Original strand, 36910558 - 36910604
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatca 91  Q
    |||||||||||||||||||||||| ||||||| ||||||||| ||||    
T  36910558 acaaaaataaaacgatattcattcattcaaatcgatagagtacatca 36910604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 45 - 91
Target Start/End: Original strand, 46304313 - 46304359
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatca 91  Q
    ||||||| |||||||||||||||| ||||||||||||||||| ||||    
T  46304313 acaaaaacaaaacgatattcattcattcaaattgatagagtacatca 46304359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 23799740 - 23799781
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagta 86  Q
    ||||||| |||||||||||||||| |||||||||||||||||    
T  23799740 acaaaaacaaaacgatattcattcattcaaattgatagagta 23799781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 114
Target Start/End: Original strand, 24396291 - 24396360
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaa 114  Q
    ||||||| |||||||||||||||  ||||||||||||||||| |||||| || || | ||||||| ||||    
T  24396291 acaaaaacaaaacgatattcattaattcaaattgatagagtacatcattcaatattgctaaaaacttaaa 24396360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 114
Target Start/End: Complemental strand, 36237153 - 36237113
Alignment:
Q  74 aattgatagagtatatcatttaacatcgttaaaaacataaa 114  Q
    |||||||| |||| |||||||||||||||||||||||||||    
T  36237153 aattgatatagtacatcatttaacatcgttaaaaacataaa 36237113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 45 - 136
Target Start/End: Original strand, 3848694 - 3848785
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaaaaataaatttacgaacaaactc 136  Q
    |||||||||||| ||||||||||| ||||||| || ||| || |||||| |||| || ||||||| ||||  || ||| | |||||||||||    
T  3848694 acaaaaataaaaagatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactc 3848785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 45 - 136
Target Start/End: Complemental strand, 22803329 - 22803238
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaaaaataaatttacgaacaaactc 136  Q
    |||||||||||  ||||||||||| || |||| |||||  || |||||| ||||||| ||||||| ||||  ||||||||  ||||||||||    
T  22803329 acaaaaataaattgatattcattcatttaaatcgataggttacatcattcaacatcgctaaaaacgtaaaggataaatttgtgaacaaactc 22803238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 45 - 136
Target Start/End: Complemental strand, 36906421 - 36906330
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaaaaataaatttacgaacaaactc 136  Q
    |||||||||||| ||||||||||| ||||||| || ||| || |||||| |||| || ||||||| ||||  || ||| | |||||||||||    
T  36906421 acaaaaataaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactc 36906330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 91
Target Start/End: Complemental strand, 14585931 - 14585886
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatca 91  Q
    ||||||||||| |||||||||||| ||||||||||||||||| ||||    
T  14585931 acaaaaataaa-cgatattcattcattcaaattgatagagtacatca 14585886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 91
Target Start/End: Complemental strand, 19645659 - 19645614
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatca 91  Q
    ||||||||||| |||||||||||| ||||||||||||||||| ||||    
T  19645659 acaaaaataaa-cgatattcattcattcaaattgatagagtacatca 19645614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 91
Target Start/End: Original strand, 20464757 - 20464803
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatca 91  Q
    ||||||| |||| ||||||||||| ||||||||||||||||| ||||    
T  20464757 acaaaaacaaaatgatattcattcattcaaattgatagagtacatca 20464803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 91
Target Start/End: Complemental strand, 21431911 - 21431865
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatca 91  Q
    ||||||||||||||| |||||||| ||||||| ||||||||| ||||    
T  21431911 acaaaaataaaacgacattcattcattcaaatcgatagagtacatca 21431865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 91
Target Start/End: Complemental strand, 43017184 - 43017138
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatca 91  Q
    ||||||| |||||||||||||||| ||||||| ||||||||| ||||    
T  43017184 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatca 43017138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 91
Target Start/End: Original strand, 50981125 - 50981171
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatca 91  Q
    |||||||  ||||||||||||||| ||||||||||||||||| ||||    
T  50981125 acaaaaaataaacgatattcattcattcaaattgatagagtacatca 50981171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 91
Target Start/End: Original strand, 51084259 - 51084305
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatca 91  Q
    |||||||  ||||||||||||||| ||||||||||||||||| ||||    
T  51084259 acaaaaaataaacgatattcattcattcaaattgatagagtacatca 51084305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 91
Target Start/End: Original strand, 52922909 - 52922955
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatca 91  Q
    ||||||| |||||||||||||||| ||||||| ||||||||| ||||    
T  52922909 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatca 52922955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 91
Target Start/End: Complemental strand, 54149287 - 54149241
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatca 91  Q
    |||||||| ||||||||||||||| ||||||| ||||||||| ||||    
T  54149287 acaaaaattaaacgatattcattcattcaaatcgatagagtacatca 54149241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 114
Target Start/End: Original strand, 6823403 - 6823468
Alignment:
Q  49 aaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaa 114  Q
    |||||||| ||||||||||| || ||||||||||| || || ||| ||||||| ||||||| ||||    
T  6823403 aaataaaatgatattcattcatttaaattgatagattacattattaaacatcgctaaaaacctaaa 6823468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 6954488 - 6954529
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagta 86  Q
    ||||||| |||||||||||||||| ||||||| |||||||||    
T  6954488 acaaaaacaaaacgatattcattcattcaaatcgatagagta 6954529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 86
Target Start/End: Complemental strand, 11819553 - 11819513
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagta 86  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  11819553 acaaaaataaa-cgatattcattcattcaaattgatagagta 11819513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 13701662 - 13701702
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagta 86  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  13701662 acaaaaataaa-cgatattcattcattcaaattgatagagta 13701702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 24483356 - 24483396
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagta 86  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  24483356 acaaaaataaa-cgatattcattcattcaaattgatagagta 24483396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 146
Target Start/End: Complemental strand, 32607768 - 32607667
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaaaaataaatttacgaacaaactcgcaacgtc 144  Q
    ||||||| |||| ||||||||||| ||||||| || ||| || |||||| |||| || ||||||| ||||  || ||| | ||||||||||| |||| ||    
T  32607768 acaaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacaacatc 32607669  T
Q  145 ca 146  Q
    ||    
T  32607668 ca 32607667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 90
Target Start/End: Original strand, 40012932 - 40012976
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatc 90  Q
    ||||||||||| ||||||| |||| |||||||||||||||||||||    
T  40012932 acaaaaataaa-cgatatttattcattcaaattgatagagtatatc 40012976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 90
Target Start/End: Complemental strand, 45047966 - 45047922
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatc 90  Q
    |||||||||||  ||||||||||| |||||||||||||||||||||    
T  45047966 acaaaaataaat-gatattcattcattcaaattgatagagtatatc 45047922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 86
Target Start/End: Complemental strand, 47896447 - 47896406
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagta 86  Q
    ||||||| |||||||||||||||  |||||||||||||||||    
T  47896447 acaaaaacaaaacgatattcattgattcaaattgatagagta 47896406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 86
Target Start/End: Complemental strand, 48401562 - 48401521
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagta 86  Q
    |||||||  ||||||||||||||| |||||||||||||||||    
T  48401562 acaaaaaataaacgatattcattcattcaaattgatagagta 48401521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 49627764 - 49627804
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagta 86  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  49627764 acaaaaataaa-cgatattcattcattcaaattgatagagta 49627804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 55090359 - 55090399
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagta 86  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  55090359 acaaaaataaa-cgatattcattcattcaaattgatagagta 55090399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 86
Target Start/End: Complemental strand, 55455331 - 55455291
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagta 86  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  55455331 acaaaaataaa-cgatattcattcattcaaattgatagagta 55455291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 1074562 - 1074594
Alignment:
Q  54 aaacgatattcattctttcaaattgatagagta 86  Q
    ||||||||||||||| |||||||||||||||||    
T  1074562 aaacgatattcattcattcaaattgatagagta 1074594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 2192539 - 2192507
Alignment:
Q  54 aaacgatattcattctttcaaattgatagagta 86  Q
    ||||||||||||||| |||||||||||||||||    
T  2192539 aaacgatattcattcattcaaattgatagagta 2192507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 7448715 - 7448747
Alignment:
Q  54 aaacgatattcattctttcaaattgatagagta 86  Q
    ||||||||||||||| |||||||||||||||||    
T  7448715 aaacgatattcattcattcaaattgatagagta 7448747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 7456857 - 7456889
Alignment:
Q  54 aaacgatattcattctttcaaattgatagagta 86  Q
    ||||||||||||||| |||||||||||||||||    
T  7456857 aaacgatattcattcattcaaattgatagagta 7456889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 136
Target Start/End: Original strand, 21533601 - 21533695
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcattt---aacatcgttaaaaacataaaaaataaatttacgaacaaactc 136  Q
    ||||||| |||| ||||||||||| ||||||| ||||||||| ||||  |   ||||||| ||||||| |||||  ||||| | |||||||||||    
T  21533601 acaaaaacaaaatgatattcattcattcaaatcgatagagtacatcagatacaaacatcgctaaaaacgtaaaaggtaaatctgcgaacaaactc 21533695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 90
Target Start/End: Original strand, 34103426 - 34103462
Alignment:
Q  54 aaacgatattcattctttcaaattgatagagtatatc 90  Q
    |||| |||||||||| |||||||||||||||||||||    
T  34103426 aaacaatattcattcgttcaaattgatagagtatatc 34103462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 91
Target Start/End: Complemental strand, 37041062 - 37041018
Alignment:
Q  47 aaaaataaaacgatattcattctttcaaattgatagagtatatca 91  Q
    ||||| |||||||||||||||| |||| |||||||||||| ||||    
T  37041062 aaaaacaaaacgatattcattcattcagattgatagagtacatca 37041018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 91
Target Start/End: Original strand, 45568239 - 45568283
Alignment:
Q  47 aaaaataaaacgatattcattctttcaaattgatagagtatatca 91  Q
    ||||| |||||||||||||||| ||||||| ||||||||| ||||    
T  45568239 aaaaacaaaacgatattcattcattcaaatcgatagagtacatca 45568283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 54706400 - 54706432
Alignment:
Q  54 aaacgatattcattctttcaaattgatagagta 86  Q
    ||||||||||||||| |||||||||||||||||    
T  54706400 aaacgatattcattcattcaaattgatagagta 54706432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 90
Target Start/End: Complemental strand, 55446509 - 55446473
Alignment:
Q  54 aaacgatattcattctttcaaattgatagagtatatc 90  Q
    ||||||||||||||| |||||||||| ||||||||||    
T  55446509 aaacgatattcattcattcaaattgacagagtatatc 55446473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 47 - 148
Target Start/End: Original strand, 39927332 - 39927433
Alignment:
Q  47 aaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaaaaataaatttacgaacaaactcgcaacgtcca 146  Q
    ||||| |||||||||||||||| || |||| |||| |||||||| || ||||||| ||||||||||||  || ||| | ||||||||||| |||| ||||    
T  39927332 aaaaacaaaacgatattcattcattgaaatagatatagtatatcgttcaacatcgctaaaaacataaaggatgaatatgcgaacaaactcacaacatcca 39927431  T
Q  147 aa 148  Q
    ||    
T  39927432 aa 39927433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 45 - 141
Target Start/End: Complemental strand, 26535636 - 26535537
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcattt---aacatcgttaaaaacataaaaaataaatttacgaacaaactcgcaac 141  Q
    ||||||| |||||||||||||||| ||||||||||||||||| ||||  |   ||||| | ||||||| ||||  |||||| ||||||||||||| ||||    
T  26535636 acaaaaacaaaacgatattcattcattcaaattgatagagtacatcagatacaaacatagctaaaaacgtaaatgataaatctacgaacaaactcacaac 26535537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 45 - 147
Target Start/End: Complemental strand, 47133202 - 47133098
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatc--atttaacatcgttaaaaacataaaaaataaatttacgaacaaactcgcaacg 142  Q
    ||||||| |||||||||||||||| |||||||||||||| || |||  | | ||||||| ||||||| ||||  |||||| | ||||||||||| ||||     
T  47133202 acaaaaacaaaacgatattcattcattcaaattgatagaatacatcagaatcaacatcgctaaaaacgtaaaggataaatctgcgaacaaactcacaaca 47133103  T
Q  143 tccaa 147  Q
    |||||    
T  47133102 tccaa 47133098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 136
Target Start/End: Complemental strand, 9172796 - 9172705
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaaaaataaatttacgaacaaactc 136  Q
    |||||||||||| ||||||||||| |||||||||| ||| || |||||| |||| || ||||||| ||||  || ||| | |||||||||||    
T  9172796 acaaaaataaaaagatattcattcattcaaattgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactc 9172705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 136
Target Start/End: Complemental strand, 9180778 - 9180687
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaaaaataaatttacgaacaaactc 136  Q
    |||||||||||| ||||||||||| |||||||||| ||| || |||||| |||| || ||||||| ||||  || ||| | |||||||||||    
T  9180778 acaaaaataaaaagatattcattcattcaaattgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactc 9180687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 141
Target Start/End: Complemental strand, 27456789 - 27456685
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcattt--------aacatcgttaaaaacataaaaaataaatttacgaacaaactc 136  Q
    ||||||| |||||||||||||||| ||||||||||||||||| ||||  |        ||||||||||||||| ||||| || ||||| |||||||||||    
T  27456789 acaaaaacaaaacgatattcattcattcaaattgatagagtacatcacattcgacacaaacatcgttaaaaacgtaaaagatgaatttgcgaacaaactc 27456690  T
Q  137 gcaac 141  Q
     ||||    
T  27456689 acaac 27456685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 136
Target Start/End: Original strand, 51868420 - 51868511
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaaaaataaatttacgaacaaactc 136  Q
    |||||||||||| ||||||||||| ||||||| || ||| || |||||| |||| || ||||||| ||||  || ||||| |||||||||||    
T  51868420 acaaaaataaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatttgcgaacaaactc 51868511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 45 - 91
Target Start/End: Complemental strand, 44915939 - 44915893
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatca 91  Q
    |||||||||||| ||||||||||| ||||||||||||||||| ||||    
T  44915939 acaaaaataaaatgatattcattcattcaaattgatagagtacatca 44915893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 33486687 - 33486728
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagta 86  Q
    ||||||| |||||||||||||||| |||||||||||||||||    
T  33486687 acaaaaaaaaaacgatattcattcattcaaattgatagagta 33486728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 136
Target Start/End: Original strand, 45805606 - 45805695
Alignment:
Q  47 aaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaaaaataaatttacgaacaaactc 136  Q
    |||||||||| ||||||||||| ||||||| || ||| || |||||| |||| |||||||||| ||||  || ||| | |||||||||||    
T  45805606 aaaaataaaatgatattcattcattcaaatcgagagattacatcattcaacaccgttaaaaacgtaaaggatgaatctgcgaacaaactc 45805695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 147
Target Start/End: Complemental strand, 3871711 - 3871612
Alignment:
Q  47 aaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaaaaataaatttacgaacaaactcgcaacgtcca 146  Q
    |||||||||| ||||||||||| ||||||| || ||| || |||||| |||| || ||||||||||||  || |||  |||||||||||| |||| ||||    
T  3871711 aaaaataaaatgatattcattcattcaaatcgagagattacatcattaaacaccgctaaaaacataaaggat-aatcaacgaacaaactcacaacatcca 3871613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 92
Target Start/End: Original strand, 21947413 - 21947457
Alignment:
Q  48 aaaataaaacgatattcattctttcaaattgatagagtatatcat 92  Q
    ||||||||||||||||||||| ||||||| ||||||||| |||||    
T  21947413 aaaataaaacgatattcattcattcaaatcgatagagtacatcat 21947457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 141
Target Start/End: Complemental strand, 30879381 - 30879285
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaaaaataaatttacgaacaaactcgcaac 141  Q
    ||||||| |||| ||||||||||| ||||||| || ||| || |||||| |||| || ||||||| |||| ||| ||| | ||||||||||| ||||    
T  30879381 acaaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaagaatgaatctgcgaacaaactcacaac 30879285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 141
Target Start/End: Original strand, 41081479 - 41081575
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaaaaataaatttacgaacaaactcgcaac 141  Q
    ||||||| |||| ||||||||||| ||||||| ||||||||| |||||| ||||  | ||||||| ||||| || ||| |  |||||||||| ||||    
T  41081479 acaaaaacaaaatgatattcattcattcaaatcgatagagtacatcattcaacagtgctaaaaacgtaaaacatgaatctgtgaacaaactcacaac 41081575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 58 - 141
Target Start/End: Original strand, 19052122 - 19052205
Alignment:
Q  58 gatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaaaaataaatttacgaacaaactcgcaac 141  Q
    ||||||| ||| |||||||| |||||| | || ||| ||||||| |||||| |||||  ||||||||||||| |||||| ||||    
T  19052122 gatattcgttcattcaaattaatagagcaaattattcaacatcgctaaaaatataaatgataaatttacgaataaactcacaac 19052205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 45 - 136
Target Start/End: Original strand, 25406059 - 25406150
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaaaaataaatttacgaacaaactc 136  Q
    |||||||||||| ||||||||||| ||||||| || | | || |||||| |||| || ||||||| ||||| || ||| | |||||||||||    
T  25406059 acaaaaataaaatgatattcattcattcaaatcgagatattacatcattcaacaccgctaaaaacgtaaaagatgaatctgcgaacaaactc 25406150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 141
Target Start/End: Original strand, 799629 - 799723
Alignment:
Q  47 aaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaaaaataaatttacgaacaaactcgcaac 141  Q
    ||||| ||||||||||| |||  || ||||||||| |||| |||||| |||||| |||||||| ||||  || ||| |  |||||||||||||||    
T  799629 aaaaacaaaacgatatttattgatttaaattgataaagtacatcattcaacatcattaaaaacgtaaatgatgaatatgtgaacaaactcgcaac 799723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 91
Target Start/End: Complemental strand, 5984116 - 5984070
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatca 91  Q
    ||||||| |||||||||||||||| ||||||| |||||| |||||||    
T  5984116 acaaaaacaaaacgatattcattcattcaaatcgatagaatatatca 5984070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 91
Target Start/End: Original strand, 7337455 - 7337501
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatca 91  Q
    ||||||||| |||||||||||||| ||||||| ||||||||| ||||    
T  7337455 acaaaaatataacgatattcattcattcaaatcgatagagtacatca 7337501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 91
Target Start/End: Original strand, 10776253 - 10776299
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatca 91  Q
    ||||||| |||| ||||||| ||| ||||||||||||||||||||||    
T  10776253 acaaaaacaaaatgatattcgttcattcaaattgatagagtatatca 10776299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 147
Target Start/End: Complemental strand, 11454243 - 11454141
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaaaaataaatttacgaacaaactcgcaacgtc 144  Q
    |||||||||||| |||||| |||| ||||||| || ||| || |||||| |||| || ||||||| ||||  || ||| | ||||||||||| |||| ||    
T  11454243 acaaaaataaaatgatatttattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacaacatc 11454144  T
Q  145 caa 147  Q
    |||    
T  11454143 caa 11454141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 91
Target Start/End: Original strand, 11462274 - 11462320
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatca 91  Q
    ||||||| |||||||||||||||| ||||||| ||||||||| ||||    
T  11462274 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatca 11462320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 90
Target Start/End: Original strand, 12147724 - 12147758
Alignment:
Q  56 acgatattcattctttcaaattgatagagtatatc 90  Q
    ||||||||||||| |||||||||||||||||||||    
T  12147724 acgatattcattcattcaaattgatagagtatatc 12147758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 91
Target Start/End: Original strand, 35484183 - 35484229
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatca 91  Q
    |||| ||||||||||||||||||| ||||||| ||||||||| ||||    
T  35484183 acaacaataaaacgatattcattcattcaaatcgatagagtacatca 35484229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 91
Target Start/End: Original strand, 36894200 - 36894246
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatca 91  Q
    ||||||| |||||||||||||||| ||||||| ||||||||| ||||    
T  36894200 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatca 36894246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 147
Target Start/End: Complemental strand, 48217743 - 48217641
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaaaaataaatttacgaacaaactcgcaacgtc 144  Q
    ||||||| |||| ||||||||||| ||||||| || ||| || |||||||||||  | ||||||  ||||  || ||||| ||||||||||| |||| ||    
T  48217743 acaaaaacaaaatgatattcattcattcaaatcgagagattacatcatttaacactgctaaaaatgtaaaggatgaatttgcgaacaaactcacaacatc 48217644  T
Q  145 caa 147  Q
    |||    
T  48217643 caa 48217641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 4882029 - 4882069
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagta 86  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  4882029 acaaaaataaa-cgatattcattcattcaaattgatagagta 4882069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 86
Target Start/End: Complemental strand, 12872075 - 12872035
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagta 86  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  12872075 acaaaaataaa-cgatattcattcattcaaattgatagagta 12872035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 86
Target Start/End: Complemental strand, 13152896 - 13152856
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagta 86  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  13152896 acaaaaataaa-cgatattcattcattcaaattgatagagta 13152856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 114
Target Start/End: Original strand, 19715670 - 19715739
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaa 114  Q
    |||||||||||| ||||||||||| || ||||||| ||| || |||||| |||| || ||||||| ||||    
T  19715670 acaaaaataaaatgatattcattcatttaaattgagagattacatcattcaacaccgctaaaaacgtaaa 19715739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 86
Target Start/End: Complemental strand, 29205737 - 29205697
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagta 86  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  29205737 acaaaaataaa-cgatattcattcattcaaattgatagagta 29205697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 53 - 114
Target Start/End: Complemental strand, 39987716 - 39987655
Alignment:
Q  53 aaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaa 114  Q
    |||||||||||||||| |||||||||||| | || |||||| |||| || ||||||| ||||    
T  39987716 aaaacgatattcattcattcaaattgataaattacatcattcaacaccgctaaaaacgtaaa 39987655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 86
Target Start/End: Complemental strand, 44517617 - 44517577
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagta 86  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  44517617 acaaaaataaa-cgatattcattcattcaaattgatagagta 44517577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 49504387 - 49504428
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagta 86  Q
    ||||||| |||||||||||||||| ||||||| |||||||||    
T  49504387 acaaaaacaaaacgatattcattcattcaaatcgatagagta 49504428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 92
Target Start/End: Original strand, 23289187 - 23289231
Alignment:
Q  48 aaaataaaacgatattcattctttcaaattgatagagtatatcat 92  Q
    ||||||||||||||||||||| ||||||| |||||| || |||||    
T  23289187 aaaataaaacgatattcattcattcaaatcgatagattacatcat 23289231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 25032763 - 25032795
Alignment:
Q  54 aaacgatattcattctttcaaattgatagagta 86  Q
    ||||||||||||||| |||||||||||||||||    
T  25032763 aaacgatattcattcattcaaattgatagagta 25032795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 32678936 - 32678980
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatat 89  Q
    ||||||| |||||||||||||||| ||||||||||| || |||||    
T  32678936 acaaaaacaaaacgatattcattcattcaaattgatggaatatat 32678980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 50377623 - 50377587
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgata 81  Q
    ||||||| |||||||||||||||| ||||||||||||    
T  50377623 acaaaaacaaaacgatattcattcattcaaattgata 50377587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 136
Target Start/End: Original strand, 36465 - 36556
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaaaaataaatttacgaacaaactc 136  Q
    ||||||| |||||||||||| ||| |||||||||||||||||  ||||| ||||||| ||||||| ||||  || |||  ||||||||||||    
T  36465 acaaaaacaaaacgatattctttcattcaaattgatagagtacttcattcaacatcgctaaaaacgtaaatgatgaatcaacgaacaaactc 36556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 45 - 91
Target Start/End: Complemental strand, 8024 - 7978
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatca 91  Q
    ||||||| |||||||||||||||| ||||||||||||||||| ||||    
T  8024 acaaaaaaaaaacgatattcattcattcaaattgatagagtacatca 7978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 45 - 91
Target Start/End: Original strand, 31066 - 31112
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatca 91  Q
    |||||||||||||||||||||||| |||||||||||| |||| ||||    
T  31066 acaaaaataaaacgatattcattcattcaaattgatatagtacatca 31112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 45 - 136
Target Start/End: Original strand, 57881 - 57974
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatc--atttaacatcgttaaaaacataaaaaataaatttacgaacaaactc 136  Q
    ||||||| |||||||||||||||| || ||||||||||| || |||  | ||||||||| ||||||| ||||  |||||| | |||||||||||    
T  57881 acaaaaacaaaacgatattcattcatttaaattgatagaatacatcagaattaacatcgctaaaaacgtaaaggataaatctgcgaacaaactc 57974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 361574 - 361676
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcatttaacatcgttaaaaacataaaaaataaatttacgaacaaactcgcaacgtc 144  Q
    |||||||||||| ||||||||||| |||| ||||| ||| || |||||| |||| || ||||||| ||||  |||||| | |||||| |||| |||| ||    
T  361574 acaaaaataaaatgatattcattcattcatattgagagattacatcattcaacaccgctaaaaacgtaaaggataaatctgcgaacacactcacaacatc 361673  T
Q  145 caa 147  Q
    |||    
T  361674 caa 361676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 91
Target Start/End: Original strand, 26828 - 26874
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatca 91  Q
    |||||||||||| ||||||||||| || |||||||||||||| ||||    
T  26828 acaaaaataaaatgatattcattcattaaaattgatagagtacatca 26874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0536 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 86
Target Start/End: Complemental strand, 3364 - 3324
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagta 86  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  3364 acaaaaataaa-cgatattcattcattcaaattgatagagta 3324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 86
Target Start/End: Complemental strand, 35544 - 35504
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagta 86  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  35544 acaaaaataaa-cgatattcattcattcaaattgatagagta 35504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 3727 - 3759
Alignment:
Q  54 aaacgatattcattctttcaaattgatagagta 86  Q
    ||||||||||||||| |||||||||||||||||    
T  3727 aaacgatattcattcattcaaattgatagagta 3759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 136
Target Start/End: Complemental strand, 15789 - 15695
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagtatatcattt---aacatcgttaaaaacataaaaaataaatttacgaacaaactc 136  Q
    ||||||| ||||||||||| |||| ||||||| ||| ||||| |||| ||   ||||||| |||||||||||| | | ||| | |||||||||||    
T  15789 acaaaaacaaaacgatatttattccttcaaatcgattgagtacatcagttacaaacatcgctaaaaacataaagagtgaatctgcgaacaaactc 15695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 109
Target Start/End: Complemental strand, 41251 - 41215
Alignment:
Q  73 aaattgatagagtatatcatttaacatcgttaaaaac 109  Q
    ||||||||||||||||||||| || ||||||||||||    
T  41251 aaattgatagagtatatcattcaagatcgttaaaaac 41215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 85
Target Start/End: Original strand, 71092 - 71132
Alignment:
Q  45 acaaaaataaaacgatattcattctttcaaattgatagagt 85  Q
    |||||||||||| ||||||||||| ||||| ||||||||||    
T  71092 acaaaaataaaatgatattcattcattcaatttgatagagt 71132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University