View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20187_high_17 (Length: 315)
Name: NF20187_high_17
Description: NF20187
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20187_high_17 |
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Alignment Details
Target: chr7 (Bit Score: 221; Significance: 1e-121; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 17 - 254
Target Start/End: Complemental strand, 47502301 - 47502060
Alignment:
| Q |
17 |
agctccaccgttgaatccactccaacccatccaaagcagtcctgcgcctgcaagcaccattatcatgttatttgttgctgctggaaatgtttccctgtcc |
116 |
Q |
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| T |
47502301 |
agctccaccgttgaatccactccaacccatccaaagcagtcctgcgcctgcaagcaccattatcatgttatttgttgctgctggaaatgtttccctgtcc |
47502202 |
T |
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| Q |
117 |
ttgtctgctcgaggacccacctattgatcatacaccatcatcacatgcaaaaagtcagtctttaaaaattaatcaatttaagtacttgttgattttgaaa |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47502201 |
ttgtctgctcgaggacccacctattgatcatacaccatcatcacatgcaaaaagtcagtctttaaaaattaatcaatttaagtacttgttgattttgaaa |
47502102 |
T |
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| Q |
217 |
ctttaaaataa----cacaagtctataaccacccatattatc |
254 |
Q |
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| T |
47502101 |
ctttaaaataacacacacaagtctataagcacccatattatc |
47502060 |
T |
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