View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20187_low_21 (Length: 304)
Name: NF20187_low_21
Description: NF20187
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20187_low_21 |
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Alignment Details
Target: chr7 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 16 - 295
Target Start/End: Complemental strand, 6862101 - 6861822
Alignment:
| Q |
16 |
aaaagaactaatataatcaacggttttcaataccaaggactagtagtttgtaatattattaatttatgggattaaatttggagtatcttacaattttaga |
115 |
Q |
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| T |
6862101 |
aaaagaactaatataatcaacggttttcaataccaaggactagtagtttgtaatattattaatttatgggattaaatttggagtatcttacaattttaga |
6862002 |
T |
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| Q |
116 |
aactaaattgatgattcatttgaaaataaattagacatatacaagaatacaaatgtaaccnnnnnnnnnagnnnnnnntttagattaggagaggcacatc |
215 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || |||||||||||||||||||||| |
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| T |
6862001 |
aactaaattgatgattcatttgaaaatatattagacatatacaagaatacaaatgtaacctttttttatagaaaaaaatttagattaggagaggcacatc |
6861902 |
T |
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| Q |
216 |
catgtaaagttaacgagaatcaccaacttcactatggatttactaaggaattacgcataacctacaaacttgagaattat |
295 |
Q |
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|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6861901 |
catgtaaagttaacgagaatcaccaacttcgctatggatttactaaggaattacgcataacctacaaacttgagaattat |
6861822 |
T |
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