View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2018_high_45 (Length: 326)
Name: NF2018_high_45
Description: NF2018
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2018_high_45 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 8 - 326
Target Start/End: Original strand, 37029020 - 37029320
Alignment:
| Q |
8 |
taacaaaggatgtgattgtattaatttatgaactttttatttttgagtttatcaacggacgtaaaccacttttagagtgtttgagaaaactcaggaagtc |
107 |
Q |
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| T |
37029020 |
taacaaaggatgtgattgtattaatttatgaactttttatttttgagtttatcaacggacgtaaaccacttttagagtgtttgagaaaactcagaaagtc |
37029119 |
T |
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| Q |
108 |
tttgcacatatttataagttatttttagtttatttcgataaattctttaaattatatcctaagaaagcaaaagttatttattggtgctgcagatgaacac |
207 |
Q |
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| T |
37029120 |
tttgcacatatttataagttatttttagtttatttcgataaattctttaaattatatcctaagaaagcaaaagttatttattggtgctgcagatgaacac |
37029219 |
T |
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| Q |
208 |
caagaggacacacatccgtattttcttttttaccgtgttaacatacttaccaaacccactttgtcagttgataatcgatattaatttaactttcaatgaa |
307 |
Q |
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| T |
37029220 |
caagaggacacacatccgtattttcttttttaccgtgttaa--------------ccactttgtcagttgataatcgat----atttaactttcaatgaa |
37029301 |
T |
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| Q |
308 |
cgattccaaactcaaagac |
326 |
Q |
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|||| |||||||||||||| |
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| T |
37029302 |
cgatcccaaactcaaagac |
37029320 |
T |
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