View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2018_high_49 (Length: 307)

Name: NF2018_high_49
Description: NF2018
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2018_high_49
NF2018_high_49
[»] chr2 (31 HSPs)
chr2 (21-295)||(38792307-38792581)
chr2 (82-277)||(39473931-39474126)
chr2 (72-213)||(38792649-38792790)
chr2 (102-259)||(39136522-39136679)
chr2 (73-150)||(38793217-38793294)
chr2 (66-174)||(39136859-39136967)
chr2 (51-157)||(38792567-38792673)
chr2 (131-257)||(39422192-39422318)
chr2 (188-257)||(39152141-39152210)
chr2 (190-292)||(39487953-39488055)
chr2 (80-161)||(39415769-39415850)
chr2 (80-160)||(39390580-39390660)
chr2 (72-191)||(38792923-38793042)
chr2 (80-159)||(39221679-39221758)
chr2 (206-292)||(39458417-39458503)
chr2 (80-155)||(39451714-39451789)
chr2 (63-161)||(39415500-39415598)
chr2 (81-142)||(39137302-39137363)
chr2 (108-161)||(39415161-39415214)
chr2 (188-245)||(39416129-39416186)
chr2 (72-158)||(39192615-39192701)
chr2 (72-158)||(39198295-39198381)
chr2 (80-158)||(39390160-39390238)
chr2 (80-142)||(39390370-39390432)
chr2 (63-140)||(39602969-39603046)
chr2 (97-160)||(39192892-39192955)
chr2 (97-160)||(39198572-39198635)
chr2 (97-147)||(39193102-39193152)
chr2 (97-147)||(39198782-39198832)
chr2 (72-116)||(39222562-39222606)
chr2 (75-155)||(39451462-39451542)
[»] chr7 (2 HSPs)
chr7 (100-290)||(19806852-19807042)
chr7 (82-161)||(19807233-19807312)
[»] chr5 (1 HSPs)
chr5 (208-292)||(17059049-17059133)


Alignment Details
Target: chr2 (Bit Score: 246; Significance: 1e-136; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 21 - 295
Target Start/End: Complemental strand, 38792581 - 38792307
Alignment:
Q  21 gactcaagttccttcgttctgatttaataccaaaatcagtcaccagctctatcacttgaccttcaaattctctcgtttttgattcatgctccttcacccg 120  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38792581 gactcaagttccttcgttctgatttaataccaaa-tcagtcaccagctctatcacttgaccttcaaattctctcgtttttgattcatgctccttcacccg 38792483  T
Q  121 accttcatgctgcttctcttttaactcaaggtccttcattccgctctcgaactgcttttgtctca--acaccaaatcattcaccagctccttcacttggc 218  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  38792482 accttcatgctgcttctcttttaactcaaggtccttcattccgctctcaaactgcttttgtctcaacacaccaaatcattcaccagctccttcacttggc 38792383  T
Q  219 tttccaaatgcttctgttttgaaatgtcatccatgacttgataaagctccttctcttttttctcaagttcttgccta 295  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38792382 tttccaaatgcttctg-tttgaaatgtcatccatgacttgataaagctccttctcttttttctcaagttcttgccta 38792307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 82 - 277
Target Start/End: Original strand, 39473931 - 39474126
Alignment:
Q  82 ttcaaattctctcgtttttgattcatgctccttcacccgaccttcatgctgcttctcttttaactcaaggtccttcattccgctctcgaactgcttttgt 181  Q
    |||||||||||||  |||||||| |||||||| ||| || || ||| |||||||||||||| ||| ||| | || ||| | ||| || || ||||| |||    
T  39473931 ttcaaattctctctgttttgatttatgctcctccactcggccatcaagctgcttctcttttgacttaagcttctccatgcggctttcaaaatgcttctgt 39474030  T
Q  182 ctcaacaccaaatcattcaccagctccttcacttggctttccaaatgcttctgttttgaaatgtcatccatgacttgataaagctccttctctttt 277  Q
     |  | |||||||||||||| |||||||||||||||||||| || | ||||||||||||||||| ||||||||||||| |||| ||| | ||||||    
T  39474031 tttgataccaaatcattcactagctccttcacttggctttcaaattccttctgttttgaaatgttatccatgacttgacaaagttccatatctttt 39474126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 72 - 213
Target Start/End: Complemental strand, 38792790 - 38792649
Alignment:
Q  72 tcacttgaccttcaaattctctcgtttttgattcatgctccttcacccgaccttcatgctgcttctcttttaactcaaggtccttcattccgctctcgaa 171  Q
    |||||||||||||||||||||||  ||||||||| |||||||||||||| |||||||  ||||| |||||  |||||||||||||||||| | | |||||    
T  38792790 tcacttgaccttcaaattctctctcttttgattcgtgctccttcacccggccttcatattgcttttctttcgactcaaggtccttcattcggttttcgaa 38792691  T
Q  172 ctgcttttgtctcaacaccaaatcattcaccagctccttcac 213  Q
      |||| ||| |||| || |||||||||||||||||| ||||    
T  38792690 aagcttctgtttcaatacaaaatcattcaccagctccgtcac 38792649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 102 - 259
Target Start/End: Complemental strand, 39136679 - 39136522
Alignment:
Q  102 attcatgctccttcacccgaccttcatgctgcttctcttttaactcaaggtccttcattccgctctcgaactgcttttgtctcaacaccaaatcattcac 201  Q
    |||||||||||||||  || |||||| | ||| |||||||  ||||||| ||||| ||   ||| ||||| ||||| ||| |  | ||||||||||||||    
T  39136679 attcatgctccttcaatcggccttcaagttgcctctctttcgactcaagctccttaatatggctttcgaaatgcttctgttttgataccaaatcattcac 39136580  T
Q  202 cagctccttcacttggctttccaaatgcttctgttttgaaatgtcatccatgacttga 259  Q
    |||||||||||||||||||||||| | ||| ||||||||||||| |||||||||||||    
T  39136579 cagctccttcacttggctttccaattccttttgttttgaaatgttatccatgacttga 39136522  T

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Target: chr2; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 73 - 150
Target Start/End: Complemental strand, 38793294 - 38793217
Alignment:
Q  73 cacttgaccttcaaattctctcgtttttgattcatgctccttcacccgaccttcatgctgcttctcttttaactcaag 150  Q
    ||||| ||||||||||||||| | |||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  38793294 cactttaccttcaaattctctagcttttaattcatgctccttcacccgaccttcatgttgcttctcttttaactcaag 38793217  T

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Target: chr2; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 66 - 174
Target Start/End: Complemental strand, 39136967 - 39136859
Alignment:
Q  66 gctctatcacttgaccttcaaattctctcgtttttgattcatgctccttcacccgaccttcatgctgcttctcttttaactcaaggtccttcattccgct 165  Q
    |||| |||||||| | |||||||||||||  ||||||| |||||||||||||||| ||||||||||||||||||||| ||||||| ||||| |||| | |    
T  39136967 gctccatcacttggctttcaaattctctctcttttgatgcatgctccttcacccggccttcatgctgcttctcttttgactcaagctccttgattcggtt 39136868  T
Q  166 ctcgaactg 174  Q
    ||| |||||    
T  39136867 ctcaaactg 39136859  T

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Target: chr2; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 51 - 157
Target Start/End: Complemental strand, 38792673 - 38792567
Alignment:
Q  51 caaaatcagtcaccagctctatcacttgaccttcaaattctctcgtttttgattcatgctccttcacccgaccttcatgctgcttctcttttaactcaag 150  Q
    |||||||| ||||||||||  |||| ||| ||| |||||||||| |||||||||||||||||| |||| | |||||||| |||||||||||  |||||||    
T  38792673 caaaatcattcaccagctccgtcacatgatctttaaattctctcttttttgattcatgctcctccacctggccttcatgttgcttctctttcgactcaag 38792574  T
Q  151 gtccttc 157  Q
     ||||||    
T  38792573 ttccttc 38792567  T

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Target: chr2; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 131 - 257
Target Start/End: Original strand, 39422192 - 39422318
Alignment:
Q  131 tgcttctcttttaactcaaggtccttcattccgctctcgaactgcttttgtctcaacaccaaatcattcaccagctccttcacttggctttccaaatgct 230  Q
    |||||||||||  |||||||||||||||||| ||| || || ||||| ||| |  | |||||||||||| |||||||   || ||||| |||||| | ||    
T  39422192 tgcttctctttagactcaaggtccttcattcggctttcaaattgcttctgttttgataccaaatcattctccagctcggccaattggccttccaattcct 39422291  T
Q  231 tctgttttgaaatgtcatccatgactt 257  Q
    |||||||||||||||||||||||||||    
T  39422292 tctgttttgaaatgtcatccatgactt 39422318  T

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Target: chr2; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 188 - 257
Target Start/End: Complemental strand, 39152210 - 39152141
Alignment:
Q  188 accaaatcattcaccagctccttcacttggctttccaaatgcttctgttttgaaatgtcatccatgactt 257  Q
    ||||||||||||||||||||||| ||||||||||| || | ||||||||||||||||| |||||||||||    
T  39152210 accaaatcattcaccagctcctttacttggctttcaaattccttctgttttgaaatgttatccatgactt 39152141  T

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Target: chr2; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 190 - 292
Target Start/End: Original strand, 39487953 - 39488055
Alignment:
Q  190 caaatcattcaccagctccttcacttggctttccaaatgcttctgttttgaaatgtcatccatgacttgataaagctccttctcttttttctcaagttct 289  Q
    |||||||||||||||||||||||  |||||||| || | ||||||||||||||||| ||||||||||| |  ||| ||| |||||||| | || ||||||    
T  39487953 caaatcattcaccagctccttcatctggctttcaaatttcttctgttttgaaatgttatccatgacttcacgaagttccgtctcttttgtatcgagttct 39488052  T
Q  290 tgc 292  Q
    |||    
T  39488053 tgc 39488055  T

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Target: chr2; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 80 - 161
Target Start/End: Original strand, 39415769 - 39415850
Alignment:
Q  80 ccttcaaattctctcgtttttgattcatgctccttcacccgaccttcatgctgcttctcttttaactcaaggtccttcattc 161  Q
    |||||||||||||||  ||||||| ||||||| |||||||| ||||||||||||||||||||| | ||||| ||||| ||||    
T  39415769 ccttcaaattctctctcttttgatgcatgctcattcacccggccttcatgctgcttctcttttgattcaagctccttgattc 39415850  T

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Target: chr2; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 80 - 160
Target Start/End: Original strand, 39390580 - 39390660
Alignment:
Q  80 ccttcaaattctctcgtttttgattcatgctccttcacccgaccttcatgctgcttctcttttaactcaaggtccttcatt 160  Q
    |||||||||||||||  ||||||||||||||||||||| || | |||||| |||||||||||| ||||||  |||||||||    
T  39390580 ccttcaaattctctctcttttgattcatgctccttcactcggctttcatgttgcttctcttttgactcaaactccttcatt 39390660  T

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Target: chr2; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 72 - 191
Target Start/End: Complemental strand, 38793042 - 38792923
Alignment:
Q  72 tcacttgaccttcaaattctctcgtttttgattcatgctccttcacccgaccttcatgctgcttctcttttaactcaaggtccttcattccgctctcgaa 171  Q
    ||||||||||||||||||||| | | ||||| ||||||||||||| |||  ||||||  || |||||||| |||||||| |||||||||  ||| |||||    
T  38793042 tcacttgaccttcaaattctcgcttctttgagtcatgctccttcatccggtcttcattttggttctctttcaactcaagttccttcatttggctttcgaa 38792943  T
Q  172 ctgcttttgtctcaacacca 191  Q
     ||||| ||| |||| ||||    
T  38792942 atgcttctgtttcaatacca 38792923  T

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Target: chr2; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 80 - 159
Target Start/End: Complemental strand, 39221758 - 39221679
Alignment:
Q  80 ccttcaaattctctcgtttttgattcatgctccttcacccgaccttcatgctgcttctcttttaactcaaggtccttcat 159  Q
    |||||||||||||||  ||||||| |||||||||||||||  |||||||| |||||||||||| ||||||  ||||||||    
T  39221758 ccttcaaattctctctcttttgatccatgctccttcacccagccttcatgttgcttctcttttgactcaaactccttcat 39221679  T

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Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 206 - 292
Target Start/End: Complemental strand, 39458503 - 39458417
Alignment:
Q  206 tccttcacttggctttccaaatgcttctgttttgaaatgtcatccatgacttgataaagctccttctcttttttctcaagttcttgc 292  Q
    ||||||||||| ||||| |||||||||||||||||||||| |||| ||||||||| ||| ||  |||||||| |||  |||||||||    
T  39458503 tccttcacttgtctttcaaaatgcttctgttttgaaatgttatccttgacttgatgaagttctatctcttttgtcttgagttcttgc 39458417  T

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Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 80 - 155
Target Start/End: Complemental strand, 39451789 - 39451714
Alignment:
Q  80 ccttcaaattctctcgtttttgattcatgctccttcacccgaccttcatgctgcttctcttttaactcaaggtcct 155  Q
    |||||||||||||||  |||||||||||||||| ||||||| || ||||| ||| |||| ||||| ||||||||||    
T  39451789 ccttcaaattctctcacttttgattcatgctccatcacccggccctcatgttgcctctcatttaagtcaaggtcct 39451714  T

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Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 63 - 161
Target Start/End: Original strand, 39415500 - 39415598
Alignment:
Q  63 ccagctctatcacttgaccttcaaattctctcgtttttgattcatgctccttcacccgaccttcatgctgcttctcttttaactcaaggtccttcattc 161  Q
    |||||||  ||||||| | || ||||||||||  ||||||||||  |||||||||  |||||||||| ||||||||||||  |||||| ||||||||||    
T  39415500 ccagctccctcacttggcttttaaattctctctcttttgattcacactccttcacttgaccttcatgttgcttctcttttgcctcaagctccttcattc 39415598  T

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Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 81 - 142
Target Start/End: Complemental strand, 39137363 - 39137302
Alignment:
Q  81 cttcaaattctctcgtttttgattcatgctccttcacccgaccttcatgctgcttctctttt 142  Q
    ||||||||||||||  |||||||||||||||| ||||||| |||||||| || |||||||||    
T  39137363 cttcaaattctctcacttttgattcatgctccatcacccggccttcatgttgtttctctttt 39137302  T

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Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 161
Target Start/End: Original strand, 39415161 - 39415214
Alignment:
Q  108 gctccttcacccgaccttcatgctgcttctcttttaactcaaggtccttcattc 161  Q
    |||||||||| ||||||||||| |||||||||||| ||||||| ||||||||||    
T  39415161 gctccttcactcgaccttcatgttgcttctcttttgactcaagctccttcattc 39415214  T

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Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 245
Target Start/End: Original strand, 39416129 - 39416186
Alignment:
Q  188 accaaatcattcaccagctccttcacttggctttccaaatgcttctgttttgaaatgt 245  Q
    |||||||||||| | |||||||||||||||||||| || | |||||||||||||||||    
T  39416129 accaaatcattccctagctccttcacttggctttcaaattccttctgttttgaaatgt 39416186  T

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Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 72 - 158
Target Start/End: Original strand, 39192615 - 39192701
Alignment:
Q  72 tcacttgaccttcaaattctctcgtttttgattcatgctccttcacccgaccttcatgctgcttctcttttaactcaaggtccttca 158  Q
    ||||||| ||||| |||||||||  |||||||||| ||||||||||  |  ||||||| |||||||||||| ||||||  |||||||    
T  39192615 tcacttggccttcgaattctctctcttttgattcacgctccttcacttggacttcatgatgcttctcttttgactcaaactccttca 39192701  T

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Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 72 - 158
Target Start/End: Original strand, 39198295 - 39198381
Alignment:
Q  72 tcacttgaccttcaaattctctcgtttttgattcatgctccttcacccgaccttcatgctgcttctcttttaactcaaggtccttca 158  Q
    ||||||| ||||| |||||||||  |||||||||| ||||||||||  |  ||||||| |||||||||||| ||||||  |||||||    
T  39198295 tcacttggccttcgaattctctctcttttgattcacgctccttcacttggacttcatgatgcttctcttttgactcaaactccttca 39198381  T

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Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 80 - 158
Target Start/End: Original strand, 39390160 - 39390238
Alignment:
Q  80 ccttcaaattctctcgtttttgattcatgctccttcacccgaccttcatgctgcttctcttttaactcaaggtccttca 158  Q
    |||||||| ||||||  ||| ||||||||||||||||| || | |||||| |||||||||||| ||||||  |||||||    
T  39390160 ccttcaaaatctctctctttggattcatgctccttcactcggctttcatgttgcttctcttttgactcaaaatccttca 39390238  T

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Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 80 - 142
Target Start/End: Original strand, 39390370 - 39390432
Alignment:
Q  80 ccttcaaattctctcgtttttgattcatgctccttcacccgaccttcatgctgcttctctttt 142  Q
    |||||||||||||||  ||||||| ||||||||||||| || | |||||| ||||||||||||    
T  39390370 ccttcaaattctctctcttttgatccatgctccttcactcggctttcatgttgcttctctttt 39390432  T

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Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 63 - 140
Target Start/End: Complemental strand, 39603046 - 39602969
Alignment:
Q  63 ccagctctatcacttgaccttcaaattctctcgtttttgattcatgctccttcacccgaccttcatgctgcttctctt 140  Q
    |||||||  ||||||| |||||||| |||||   |||||||||||||||||||| ||||| |||||| | ||||||||    
T  39603046 ccagctccgtcacttggccttcaaactctctttcttttgattcatgctccttcaaccgactttcatgtttcttctctt 39602969  T

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Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 97 - 160
Target Start/End: Original strand, 39192892 - 39192955
Alignment:
Q  97 ttttgattcatgctccttcacccgaccttcatgctgcttctcttttaactcaaggtccttcatt 160  Q
    ||||||||||  || |||||||||||||||||| ||| |||| ||| ||||||| |||||||||    
T  39192892 ttttgattcaaacttcttcacccgaccttcatgttgcatctcgtttgactcaagctccttcatt 39192955  T

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Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 97 - 160
Target Start/End: Original strand, 39198572 - 39198635
Alignment:
Q  97 ttttgattcatgctccttcacccgaccttcatgctgcttctcttttaactcaaggtccttcatt 160  Q
    ||||||||||  || |||||||||||||||||| ||| |||| ||| ||||||| |||||||||    
T  39198572 ttttgattcaaacttcttcacccgaccttcatgttgcatctcgtttgactcaagctccttcatt 39198635  T

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Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 147
Target Start/End: Original strand, 39193102 - 39193152
Alignment:
Q  97 ttttgattcatgctccttcacccgaccttcatgctgcttctcttttaactc 147  Q
    ||||||||||  || |||||||||||||||||| ||| |||||||||||||    
T  39193102 ttttgattcaaacttcttcacccgaccttcatgttgcatctcttttaactc 39193152  T

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Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 147
Target Start/End: Original strand, 39198782 - 39198832
Alignment:
Q  97 ttttgattcatgctccttcacccgaccttcatgctgcttctcttttaactc 147  Q
    ||||||||||  || |||||||||||||||||| ||| |||||||||||||    
T  39198782 ttttgattcaaacttcttcacccgaccttcatgttgcatctcttttaactc 39198832  T

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Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 72 - 116
Target Start/End: Complemental strand, 39222606 - 39222562
Alignment:
Q  72 tcacttgaccttcaaattctctcgtttttgattcatgctccttca 116  Q
    ||||||||  |||||||||||||  ||||||||||||||||||||    
T  39222606 tcacttgaatttcaaattctctctcttttgattcatgctccttca 39222562  T

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Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 155
Target Start/End: Complemental strand, 39451542 - 39451462
Alignment:
Q  75 cttgaccttcaaattctctcgtttttgattcatgctccttcacccgaccttcatgctgcttctcttttaactcaaggtcct 155  Q
    |||| |||||||| |||||   |||||||||||||||||||| ||| | |||| | |||||||| ||| | ||||||||||    
T  39451542 cttggccttcaaactctctttcttttgattcatgctccttcaaccggctttcaagttgcttctcatttgagtcaaggtcct 39451462  T

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Target: chr7 (Bit Score: 59; Significance: 5e-25; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 100 - 290
Target Start/End: Complemental strand, 19807042 - 19806852
Alignment:
Q  100 tgattcatgctccttcacccgaccttcatgctgcttctcttttaactcaaggtccttcattccgctctcgaactgcttttgtctcaacaccaaatcattc 199  Q
    |||||||||||||||||  || |||||| | ||| |||||||  ||||||| ||||| ||   ||| ||||| ||||| ||| |  | ||||||||||||    
T  19807042 tgattcatgctccttcaatcggccttcaagttgcctctctttcgactcaagctccttaatatggctttcgaaatgcttctgttttgataccaaatcattc 19806943  T
Q  200 accagctccttcacttggctttccaaatgcttctgttttgaaatgtcatccatgacttgataaagctccttctcttttttctcaagttctt 290  Q
    | |||||||||||| ||||||||||| | ||| ||||||||||||| |||||||||||||| ||| |||  ||||||| |||  |||||||    
T  19806942 atcagctccttcacgtggctttccaattccttttgttttgaaatgttatccatgacttgatgaagttccaactcttttgtctttagttctt 19806852  T

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Target: chr7; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 82 - 161
Target Start/End: Complemental strand, 19807312 - 19807233
Alignment:
Q  82 ttcaaattctctcgtttttgattcatgctccttcacccgaccttcatgctgcttctcttttaactcaaggtccttcattc 161  Q
    |||||||||||||  ||||||| |||||||||||| ||| ||||||||||||||||||||| ||||||| ||||| ||||    
T  19807312 ttcaaattctctctcttttgatgcatgctccttcatccggccttcatgctgcttctcttttgactcaagctccttgattc 19807233  T

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Target: chr5 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 208 - 292
Target Start/End: Complemental strand, 17059133 - 17059049
Alignment:
Q  208 cttcacttggctttccaaatgcttctgttttgaaatgtcatccatgacttgataaagctccttctcttttttctcaagttcttgc 292  Q
    ||||| || |||||| |||||||||||||||||||||| |||||||||||||  ||| ||  |||||||| || | |||||||||    
T  17059133 cttcaatttgctttcaaaatgcttctgttttgaaatgttatccatgacttgacgaagttctctctcttttgtcacgagttcttgc 17059049  T

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