View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2018_high_62 (Length: 257)
Name: NF2018_high_62
Description: NF2018
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2018_high_62 |
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Alignment Details
Target: chr4 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 37029336 - 37029578
Alignment:
| Q |
1 |
gatgacaattttccttccatgctggatttatgaatatatttgagagtttggtggaaaccattttagagtttttgatgagttggacaaatatttagaagat |
100 |
Q |
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| T |
37029336 |
gatgacaattttccttccatgctggatttatgaatatatttgagagtttggtggaaaccattttagagtttttgatgagttggacaaatatttagaagat |
37029435 |
T |
|
| Q |
101 |
atagaaaagttgtttaaataattgacaagtacaaaacattgtaaaaattatgcgggattccttttaaggaacttaaataaatgtaatggatgcagatgca |
200 |
Q |
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||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
37029436 |
atagaaaagttgtttaaataattaagaagtacaaaacattgtaaaaattatgcgggattccttttaaagaacttaaataaatgtaatggatgcagatgca |
37029535 |
T |
|
| Q |
201 |
ttgaagttactccaaatcgacacgatggacaacatgatattgt |
243 |
Q |
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||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
37029536 |
ttgaagttactccaaatagacacgatggacaacatgatattgt |
37029578 |
T |
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