View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2018_high_74 (Length: 237)

Name: NF2018_high_74
Description: NF2018
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2018_high_74
NF2018_high_74
[»] chr7 (80 HSPs)
chr7 (2-158)||(13681518-13681674)
chr7 (1-161)||(13645671-13645831)
chr7 (1-162)||(16315315-16315476)
chr7 (1-161)||(10883948-10884108)
chr7 (4-161)||(13731455-13731614)
chr7 (1-161)||(13302081-13302241)
chr7 (3-141)||(9069000-9069138)
chr7 (1-161)||(33604124-33604287)
chr7 (36-157)||(2914469-2914589)
chr7 (1-161)||(21284151-21284312)
chr7 (1-161)||(24787580-24787741)
chr7 (1-162)||(11318614-11318785)
chr7 (36-161)||(12367571-12367695)
chr7 (1-158)||(41843201-41843357)
chr7 (36-161)||(11792090-11792215)
chr7 (1-161)||(14186906-14187069)
chr7 (1-161)||(19328788-19328948)
chr7 (1-161)||(30025154-30025315)
chr7 (36-159)||(5001676-5001798)
chr7 (1-149)||(29936122-29936271)
chr7 (32-161)||(4493764-4493892)
chr7 (1-161)||(14424527-14424689)
chr7 (36-156)||(16317410-16317529)
chr7 (32-178)||(13473297-13473442)
chr7 (4-161)||(12175118-12175272)
chr7 (1-161)||(4820706-4820867)
chr7 (36-161)||(35954725-35954849)
chr7 (1-115)||(4832102-4832216)
chr7 (36-161)||(13259257-13259381)
chr7 (44-161)||(13261497-13261613)
chr7 (44-160)||(16310777-16310892)
chr7 (1-160)||(28623136-28623290)
chr7 (99-161)||(16546213-16546275)
chr7 (99-161)||(16619387-16619449)
chr7 (93-157)||(15467139-15467203)
chr7 (93-161)||(16557480-16557548)
chr7 (93-161)||(16608114-16608182)
chr7 (1-44)||(2499400-2499443)
chr7 (36-142)||(13034666-13034772)
chr7 (13-132)||(16155529-16155649)
chr7 (99-161)||(21691644-21691706)
chr7 (93-179)||(2499228-2499316)
chr7 (36-161)||(48237649-48237773)
chr7 (36-159)||(9710648-9710770)
chr7 (93-161)||(13879363-13879431)
chr7 (93-161)||(15705364-15705431)
chr7 (1-44)||(2914388-2914431)
chr7 (1-44)||(4493912-4493955)
chr7 (1-44)||(5001603-5001646)
chr7 (1-44)||(13027676-13027719)
chr7 (1-44)||(13034615-13034658)
chr7 (1-44)||(13879507-13879550)
chr7 (36-179)||(33692536-33692681)
chr7 (1-44)||(44466431-44466474)
chr7 (1-58)||(330974-331031)
chr7 (93-159)||(13027821-13027887)
chr7 (1-161)||(15087771-15087931)
chr7 (1-72)||(19711788-19711860)
chr7 (107-161)||(22580138-22580192)
chr7 (1-34)||(12367514-12367547)
chr7 (1-46)||(13138673-13138718)
chr7 (93-161)||(13138795-13138863)
chr7 (123-159)||(13902553-13902589)
chr7 (93-161)||(15574478-15574545)
chr7 (94-161)||(23280846-23280914)
chr7 (1-44)||(9099007-9099050)
chr7 (1-44)||(9099813-9099856)
chr7 (1-44)||(11792247-11792290)
chr7 (1-44)||(16317331-16317374)
chr7 (1-44)||(21211321-21211364)
chr7 (123-162)||(21211476-21211515)
chr7 (93-132)||(30946276-30946315)
chr7 (1-44)||(39285280-39285323)
chr7 (122-159)||(1292275-1292312)
chr7 (1-34)||(16310684-16310717)
chr7 (1-44)||(9710580-9710624)
chr7 (8-44)||(13902396-13902432)
chr7 (1-44)||(16557365-16557409)
chr7 (1-44)||(16608253-16608297)
chr7 (100-160)||(33420976-33421035)
[»] chr2 (40 HSPs)
chr2 (1-160)||(24575253-24575414)
chr2 (1-161)||(20569471-20569629)
chr2 (1-179)||(10010472-10010648)
chr2 (1-161)||(25828374-25828542)
chr2 (1-158)||(39038362-39038517)
chr2 (36-161)||(17964058-17964183)
chr2 (1-179)||(21537906-21538087)
chr2 (42-161)||(22257409-22257528)
chr2 (1-149)||(38630981-38631133)
chr2 (36-161)||(24778551-24778675)
chr2 (1-161)||(22455680-22455839)
chr2 (44-160)||(24851436-24851551)
chr2 (36-160)||(40780530-40780653)
chr2 (1-58)||(26367128-26367185)
chr2 (1-161)||(25188622-25188778)
chr2 (1-69)||(28141322-28141390)
chr2 (28-161)||(45087744-45087877)
chr2 (4-157)||(22188826-22188983)
chr2 (1-58)||(22316915-22316972)
chr2 (93-161)||(28702036-28702104)
chr2 (88-161)||(27294711-27294784)
chr2 (1-81)||(19539713-19539796)
chr2 (93-146)||(20152806-20152859)
chr2 (99-158)||(13964801-13964860)
chr2 (63-161)||(31801667-31801765)
chr2 (93-158)||(28712518-28712583)
chr2 (121-161)||(18377063-18377103)
chr2 (1-161)||(44839653-44839813)
chr2 (1-44)||(23234346-23234389)
chr2 (1-36)||(24376451-24376486)
chr2 (123-161)||(22782473-22782511)
chr2 (123-161)||(23185172-23185210)
chr2 (123-161)||(23596435-23596473)
chr2 (115-161)||(24376338-24376384)
chr2 (12-67)||(27296756-27296813)
chr2 (36-161)||(31328729-31328853)
chr2 (36-161)||(31335450-31335574)
chr2 (1-70)||(16494657-16494727)
chr2 (1-58)||(21845485-21845542)
chr2 (93-161)||(6391886-6391954)
[»] chr5 (37 HSPs)
chr5 (1-162)||(6513187-6513348)
chr5 (1-161)||(6498534-6498694)
chr5 (1-158)||(17814186-17814345)
chr5 (1-158)||(23413730-23413890)
chr5 (1-160)||(21075939-21076099)
chr5 (1-161)||(7746450-7746613)
chr5 (4-161)||(22000786-22000944)
chr5 (1-160)||(9399372-9399529)
chr5 (36-161)||(31487428-31487552)
chr5 (1-161)||(37395387-37395547)
chr5 (44-159)||(90234-90349)
chr5 (2-161)||(19546279-19546447)
chr5 (1-160)||(13546277-13546443)
chr5 (1-161)||(31117095-31117260)
chr5 (36-161)||(33932487-33932611)
chr5 (93-161)||(21100599-21100667)
chr5 (1-161)||(11993109-11993271)
chr5 (99-161)||(12353718-12353780)
chr5 (93-159)||(13736955-13737021)
chr5 (1-47)||(26766591-26766637)
chr5 (1-135)||(643456-643588)
chr5 (123-161)||(21199890-21199928)
chr5 (36-142)||(33021898-33022003)
chr5 (36-124)||(23880269-23880356)
chr5 (123-159)||(25097920-25097956)
chr5 (123-159)||(25157012-25157048)
chr5 (1-44)||(21100459-21100502)
chr5 (1-44)||(25097582-25097625)
chr5 (1-44)||(31487576-31487619)
chr5 (93-132)||(42242856-42242895)
chr5 (2-44)||(21207533-21207575)
chr5 (1-43)||(25155552-25155594)
chr5 (123-161)||(31146482-31146520)
chr5 (1-159)||(35932762-35932921)
chr5 (36-69)||(26783649-26783682)
chr5 (1-42)||(39799596-39799637)
chr5 (129-161)||(20967238-20967270)
[»] chr6 (44 HSPs)
chr6 (1-161)||(15301438-15301600)
chr6 (1-161)||(25593292-25593453)
chr6 (1-161)||(13601387-13601551)
chr6 (1-161)||(14732882-14733044)
chr6 (1-161)||(19623207-19623364)
chr6 (1-161)||(16528535-16528695)
chr6 (4-161)||(20113404-20113563)
chr6 (1-161)||(13435105-13435270)
chr6 (36-161)||(21234376-21234500)
chr6 (1-161)||(21624312-21624476)
chr6 (36-155)||(12716250-12716369)
chr6 (1-161)||(16876129-16876289)
chr6 (36-160)||(32543484-32543607)
chr6 (36-161)||(14101247-14101373)
chr6 (93-163)||(15532491-15532561)
chr6 (36-161)||(19085352-19085476)
chr6 (93-161)||(17380783-17380851)
chr6 (1-161)||(22801363-22801525)
chr6 (93-160)||(10631358-10631425)
chr6 (36-149)||(24116049-24116162)
chr6 (36-156)||(20731511-20731630)
chr6 (93-159)||(9717048-9717114)
chr6 (36-161)||(16332950-16333073)
chr6 (1-58)||(25929807-25929863)
chr6 (122-161)||(19624996-19625035)
chr6 (1-44)||(23296128-23296171)
chr6 (1-44)||(25591964-25592007)
chr6 (1-161)||(15986582-15986738)
chr6 (123-161)||(17304155-17304193)
chr6 (99-161)||(19687954-19688015)
chr6 (101-159)||(29537843-29537901)
chr6 (7-44)||(26941777-26941814)
chr6 (1-44)||(14101202-14101245)
chr6 (1-44)||(17927134-17927177)
chr6 (46-161)||(18377647-18377761)
chr6 (46-161)||(18434730-18434845)
chr6 (93-161)||(24717678-24717748)
chr6 (1-44)||(32335184-32335227)
chr6 (1-35)||(3680464-3680498)
chr6 (93-174)||(21617461-21617541)
chr6 (1-44)||(17380918-17380962)
chr6 (8-44)||(18434880-18434916)
chr6 (8-44)||(19085500-19085536)
chr6 (93-161)||(19833850-19833917)
[»] chr3 (67 HSPs)
chr3 (8-158)||(20645379-20645531)
chr3 (1-161)||(13781361-13781521)
chr3 (1-159)||(49643537-49643697)
chr3 (1-161)||(13939118-13939280)
chr3 (1-161)||(15902417-15902580)
chr3 (1-160)||(12963860-12964020)
chr3 (1-161)||(29952211-29952372)
chr3 (1-161)||(30001365-30001526)
chr3 (36-161)||(19889750-19889874)
chr3 (1-159)||(6089952-6090111)
chr3 (1-161)||(17239697-17239864)
chr3 (36-161)||(17667592-17667717)
chr3 (1-160)||(12727010-12727170)
chr3 (1-161)||(41494225-41494383)
chr3 (10-149)||(22804806-22804944)
chr3 (1-161)||(2560407-2560570)
chr3 (1-161)||(13823292-13823451)
chr3 (36-157)||(16659371-16659494)
chr3 (36-162)||(8874935-8875061)
chr3 (36-179)||(14393806-14393951)
chr3 (5-162)||(14968590-14968744)
chr3 (36-179)||(19885889-19886033)
chr3 (1-161)||(3237916-3238076)
chr3 (3-160)||(38178419-38178579)
chr3 (46-161)||(52919646-52919761)
chr3 (8-161)||(25399036-25399190)
chr3 (36-161)||(1241886-1242010)
chr3 (36-161)||(20628273-20628397)
chr3 (25-141)||(50299480-50299595)
chr3 (1-157)||(46350621-46350772)
chr3 (1-161)||(52283017-52283174)
chr3 (93-161)||(14954632-14954700)
chr3 (45-161)||(40799112-40799227)
chr3 (1-58)||(2025416-2025473)
chr3 (1-161)||(31302571-31302733)
chr3 (1-132)||(47406196-47406323)
chr3 (93-161)||(49554377-49554445)
chr3 (101-179)||(11189196-11189275)
chr3 (114-161)||(28581317-28581364)
chr3 (93-159)||(29854635-29854700)
chr3 (36-161)||(2782706-2782832)
chr3 (93-161)||(18122515-18122583)
chr3 (1-44)||(6252762-6252805)
chr3 (1-44)||(17667747-17667790)
chr3 (1-44)||(18122387-18122430)
chr3 (123-162)||(19250285-19250324)
chr3 (122-161)||(22465376-22465415)
chr3 (1-44)||(26418451-26418494)
chr3 (1-44)||(28581447-28581490)
chr3 (124-158)||(12967540-12967574)
chr3 (93-143)||(16031743-16031793)
chr3 (123-161)||(16199943-16199981)
chr3 (1-43)||(22770631-22770673)
chr3 (123-161)||(26418618-26418656)
chr3 (42-132)||(47206914-47207003)
chr3 (1-159)||(49669263-49669418)
chr3 (36-158)||(2783099-2783222)
chr3 (93-161)||(11222015-11222086)
chr3 (93-161)||(11222767-11222838)
chr3 (7-44)||(14393749-14393786)
chr3 (3-44)||(19885832-19885873)
chr3 (1-57)||(22128408-22128462)
chr3 (8-44)||(6174677-6174713)
chr3 (4-44)||(19250129-19250169)
chr3 (93-161)||(21639149-21639216)
chr3 (1-58)||(46797170-46797229)
chr3 (4-44)||(52919806-52919846)
[»] scaffold0084 (2 HSPs)
scaffold0084 (1-161)||(31811-31971)
scaffold0084 (56-161)||(48538-48643)
[»] chr4 (46 HSPs)
chr4 (1-159)||(19665587-19665744)
chr4 (1-162)||(37986344-37986505)
chr4 (1-160)||(29681248-29681407)
chr4 (1-160)||(23120756-23120916)
chr4 (1-157)||(23749748-23749903)
chr4 (1-161)||(36470135-36470294)
chr4 (1-161)||(16631657-16631819)
chr4 (36-157)||(12599977-12600098)
chr4 (1-157)||(14605637-14605793)
chr4 (36-161)||(19611138-19611263)
chr4 (1-138)||(3394889-3395029)
chr4 (1-157)||(55379534-55379689)
chr4 (40-161)||(19621761-19621881)
chr4 (44-161)||(10072108-10072224)
chr4 (36-161)||(22676327-22676451)
chr4 (1-161)||(29120586-29120745)
chr4 (93-158)||(24628720-24628785)
chr4 (93-161)||(15134937-15135005)
chr4 (93-161)||(3792551-3792619)
chr4 (1-142)||(37436264-37436402)
chr4 (1-161)||(8686175-8686331)
chr4 (36-158)||(10071725-10071846)
chr4 (36-142)||(17246847-17246952)
chr4 (36-161)||(54679079-54679203)
chr4 (93-161)||(44397427-44397495)
chr4 (90-161)||(19883911-19883982)
chr4 (1-176)||(3106150-3106321)
chr4 (177-221)||(12599729-12599773)
chr4 (36-159)||(13576915-13577037)
chr4 (93-157)||(14905148-14905212)
chr4 (1-44)||(19884069-19884112)
chr4 (93-160)||(56033747-56033814)
chr4 (1-35)||(17788772-17788806)
chr4 (126-161)||(6640910-6640945)
chr4 (1-44)||(11900527-11900570)
chr4 (1-44)||(14357695-14357738)
chr4 (1-44)||(22676254-22676297)
chr4 (1-44)||(45832723-45832766)
chr4 (1-72)||(15475879-15475951)
chr4 (1-43)||(22089623-22089665)
chr4 (123-161)||(40859925-40859963)
chr4 (1-35)||(41115489-41115523)
chr4 (93-157)||(11914893-11914955)
chr4 (1-44)||(13576847-13576891)
chr4 (1-44)||(16852839-16852883)
chr4 (129-161)||(18473289-18473321)
[»] scaffold0004 (3 HSPs)
scaffold0004 (10-163)||(378283-378442)
scaffold0004 (4-161)||(219461-219622)
scaffold0004 (1-44)||(245006-245049)
[»] scaffold0530 (1 HSPs)
scaffold0530 (1-161)||(2741-2903)
[»] chr8 (44 HSPs)
chr8 (1-161)||(12758510-12758678)
chr8 (36-161)||(19153239-19153364)
chr8 (3-147)||(16682029-16682175)
chr8 (1-121)||(20256286-20256408)
chr8 (43-161)||(17007525-17007643)
chr8 (43-161)||(17541307-17541425)
chr8 (1-161)||(25163286-25163448)
chr8 (1-161)||(19942451-19942613)
chr8 (1-124)||(29692564-29692689)
chr8 (36-162)||(30422242-30422367)
chr8 (36-159)||(20383162-20383284)
chr8 (36-161)||(17796632-17796756)
chr8 (13-179)||(23185531-23185700)
chr8 (1-158)||(15336862-15337019)
chr8 (1-158)||(15425927-15426084)
chr8 (1-158)||(15517231-15517388)
chr8 (46-121)||(20256418-20256493)
chr8 (1-58)||(18321930-18321987)
chr8 (1-49)||(17526510-17526558)
chr8 (1-81)||(18679112-18679191)
chr8 (1-81)||(18718301-18718380)
chr8 (55-159)||(39692758-39692862)
chr8 (3-161)||(9319787-9319944)
chr8 (90-161)||(23264492-23264563)
chr8 (1-179)||(18771892-18772069)
chr8 (1-161)||(36104560-36104717)
chr8 (93-161)||(45539352-45539420)
chr8 (93-151)||(16206456-16206514)
chr8 (93-161)||(19706728-19706794)
chr8 (93-161)||(18122000-18122068)
chr8 (1-157)||(19957111-19957269)
chr8 (1-44)||(16206605-16206648)
chr8 (1-44)||(26832410-26832453)
chr8 (93-154)||(21932097-21932159)
chr8 (1-42)||(15934435-15934476)
chr8 (1-70)||(13431393-13431463)
chr8 (1-44)||(18121882-18121925)
chr8 (116-154)||(17914338-17914376)
chr8 (93-161)||(16188485-16188553)
chr8 (109-161)||(18676872-18676924)
chr8 (122-162)||(22662286-22662326)
chr8 (1-44)||(30422174-30422218)
chr8 (93-161)||(31445317-31445385)
chr8 (1-44)||(45539209-45539253)
[»] scaffold0035 (2 HSPs)
scaffold0035 (1-161)||(20195-20354)
scaffold0035 (93-161)||(110413-110480)
[»] scaffold0022 (3 HSPs)
scaffold0022 (1-161)||(36651-36815)
scaffold0022 (1-161)||(134711-134875)
scaffold0022 (1-154)||(158375-158530)
[»] chr1 (46 HSPs)
chr1 (36-161)||(22202615-22202740)
chr1 (36-158)||(33257102-33257224)
chr1 (36-158)||(33277274-33277396)
chr1 (36-143)||(22202493-22202600)
chr1 (36-179)||(28493054-28493196)
chr1 (1-160)||(10756654-10756808)
chr1 (1-158)||(22428034-22428194)
chr1 (36-161)||(48703471-48703596)
chr1 (1-81)||(26702826-26702906)
chr1 (1-161)||(2833876-2834041)
chr1 (36-161)||(30892285-30892409)
chr1 (36-161)||(7309011-7309136)
chr1 (1-161)||(36133431-36133588)
chr1 (93-161)||(20959821-20959889)
chr1 (1-161)||(32786634-32786797)
chr1 (36-158)||(12283617-12283737)
chr1 (1-161)||(22600882-22601045)
chr1 (8-174)||(1899554-1899724)
chr1 (20-158)||(29215023-29215160)
chr1 (36-161)||(23037258-23037382)
chr1 (36-143)||(2266324-2266430)
chr1 (101-179)||(14294081-14294159)
chr1 (1-161)||(14264130-14264285)
chr1 (123-160)||(18614135-18614172)
chr1 (1-161)||(21215372-21215530)
chr1 (1-161)||(44824455-44824611)
chr1 (1-44)||(28492977-28493020)
chr1 (102-161)||(38281583-38281642)
chr1 (1-44)||(38281907-38281950)
chr1 (36-161)||(22153046-22153172)
chr1 (101-179)||(22465611-22465691)
chr1 (93-161)||(1577069-1577137)
chr1 (122-162)||(21135977-21136017)
chr1 (38-161)||(21205596-21205715)
chr1 (1-44)||(16236002-16236045)
chr1 (122-161)||(21121871-21121910)
chr1 (1-44)||(22202430-22202473)
chr1 (1-44)||(30892435-30892478)
chr1 (123-161)||(21192703-21192741)
chr1 (47-161)||(25449333-25449445)
chr1 (123-160)||(12625367-12625404)
chr1 (1-58)||(10250314-10250373)
chr1 (1-44)||(19214952-19214996)
chr1 (1-70)||(21121760-21121830)
chr1 (1-70)||(21983910-21983980)
chr1 (8-44)||(22465513-22465549)
[»] scaffold0146 (1 HSPs)
scaffold0146 (1-161)||(14336-14503)
[»] scaffold0337 (1 HSPs)
scaffold0337 (1-147)||(14203-14351)
[»] scaffold0171 (1 HSPs)
scaffold0171 (1-143)||(28153-28300)
[»] scaffold0065 (1 HSPs)
scaffold0065 (1-147)||(1245-1393)
[»] scaffold0026 (2 HSPs)
scaffold0026 (36-161)||(7101-7226)
scaffold0026 (1-44)||(7268-7311)
[»] scaffold0005 (1 HSPs)
scaffold0005 (1-157)||(211585-211741)
[»] scaffold0479 (1 HSPs)
scaffold0479 (1-161)||(9188-9349)
[»] scaffold0567 (1 HSPs)
scaffold0567 (1-161)||(9120-9291)
[»] scaffold0315 (1 HSPs)
scaffold0315 (1-162)||(7890-8044)
[»] scaffold0161 (2 HSPs)
scaffold0161 (1-149)||(10833-10985)
scaffold0161 (1-149)||(15497-15649)
[»] scaffold0205 (1 HSPs)
scaffold0205 (36-161)||(717-841)
[»] scaffold0163 (2 HSPs)
scaffold0163 (46-161)||(25650-25765)
scaffold0163 (1-44)||(25802-25845)
[»] scaffold0334 (1 HSPs)
scaffold0334 (1-115)||(7163-7278)
[»] scaffold0210 (2 HSPs)
scaffold0210 (90-157)||(847-914)
scaffold0210 (1-44)||(1001-1044)
[»] scaffold0251 (1 HSPs)
scaffold0251 (1-157)||(7055-7209)
[»] scaffold0859 (1 HSPs)
scaffold0859 (36-161)||(2191-2315)
[»] scaffold0471 (1 HSPs)
scaffold0471 (1-161)||(2676-2833)
[»] scaffold0138 (1 HSPs)
scaffold0138 (93-161)||(16208-16276)
[»] scaffold0115 (1 HSPs)
scaffold0115 (36-161)||(17551-17677)
[»] scaffold0116 (1 HSPs)
scaffold0116 (95-161)||(21758-21824)
[»] scaffold0023 (1 HSPs)
scaffold0023 (36-158)||(102780-102902)
[»] scaffold0290 (1 HSPs)
scaffold0290 (36-161)||(19419-19543)
[»] scaffold0217 (2 HSPs)
scaffold0217 (1-161)||(18257-18417)
scaffold0217 (99-159)||(756-817)
[»] scaffold0028 (2 HSPs)
scaffold0028 (1-161)||(24502-24664)
scaffold0028 (123-161)||(80585-80623)
[»] scaffold0009 (2 HSPs)
scaffold0009 (93-157)||(83586-83651)
scaffold0009 (101-159)||(83520-83579)
[»] scaffold0439 (1 HSPs)
scaffold0439 (93-161)||(7530-7597)
[»] scaffold0330 (2 HSPs)
scaffold0330 (93-161)||(492-560)
scaffold0330 (1-44)||(377-420)
[»] scaffold0036 (1 HSPs)
scaffold0036 (93-161)||(111421-111489)
[»] scaffold0018 (1 HSPs)
scaffold0018 (114-158)||(50509-50553)
[»] scaffold1359 (1 HSPs)
scaffold1359 (99-162)||(33-96)
[»] scaffold0324 (1 HSPs)
scaffold0324 (1-44)||(9299-9342)
[»] scaffold0081 (2 HSPs)
scaffold0081 (123-179)||(13196-13254)
scaffold0081 (1-44)||(13386-13429)
[»] scaffold0040 (2 HSPs)
scaffold0040 (123-161)||(2919-2957)
scaffold0040 (1-44)||(2785-2828)
[»] scaffold0607 (1 HSPs)
scaffold0607 (2-58)||(5455-5511)
[»] scaffold0498 (1 HSPs)
scaffold0498 (123-159)||(1058-1094)
[»] scaffold0598 (1 HSPs)
scaffold0598 (1-161)||(2506-2673)
[»] scaffold0359 (2 HSPs)
scaffold0359 (1-44)||(6415-6458)
scaffold0359 (93-161)||(6545-6613)
[»] scaffold0327 (1 HSPs)
scaffold0327 (1-44)||(7201-7244)
[»] scaffold0201 (1 HSPs)
scaffold0201 (1-44)||(18543-18586)
[»] scaffold0120 (1 HSPs)
scaffold0120 (1-40)||(37471-37510)
[»] scaffold0056 (1 HSPs)
scaffold0056 (122-161)||(26499-26538)
[»] scaffold0047 (1 HSPs)
scaffold0047 (1-44)||(7971-8014)
[»] scaffold0025 (1 HSPs)
scaffold0025 (1-44)||(73924-73967)
[»] scaffold0280 (1 HSPs)
scaffold0280 (36-161)||(3448-3571)
[»] scaffold1281 (1 HSPs)
scaffold1281 (8-44)||(2117-2153)
[»] scaffold0249 (1 HSPs)
scaffold0249 (1-63)||(18491-18551)
[»] scaffold0064 (1 HSPs)
scaffold0064 (1-44)||(44587-44631)
[»] scaffold0011 (1 HSPs)
scaffold0011 (4-40)||(58911-58947)


Alignment Details
Target: chr7 (Bit Score: 117; Significance: 1e-59; HSPs: 80)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 2 - 158
Target Start/End: Complemental strand, 13681674 - 13681518
Alignment:
Q  2 ggaacctgtataattgctttgtatctttcttctttctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgc 101  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  || || || |||||||||    
T  13681674 ggaacctgtataattgctttgtgtctttcttctttctctctttgttttatccgctgctatttagttctggaaatcacttcagaagcagaactctatttgc 13681575  T
Q  102 ttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaac 158  Q
    ||||||||| |||||||| |||||||||||||||||||||| |||||||||||||||    
T  13681574 ttctaatcaatgttttcagcttaggagaaaacgaagaaaaatctaacataattcaac 13681518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 13645831 - 13645671
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttg 100  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| |||  || || || ||||||||    
T  13645831 aggaacctgtataattgctttgtgtctttcctctttctctctctgttttatccgctgctatttagttctggaaatcagttcagaagcagaactctatttg 13645732  T
Q  101 cttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||||| ||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  13645731 cttctgatcggtgttttcagcttaggagaaaacgaagaaaaagctaacacaattcaacccc 13645671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 16315315 - 16315476
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttg 100  Q
    ||||||||||||||||||||||| ||||||||| |||||||| |||||||||||||||||||| |||||||||||||||||  || || || ||||||||    
T  16315315 aggaacctgtataattgctttgtgtctttcttcattctctctttgttttatccgctgctattttgttctggaaatcacttcagaagcagaactctatttg 16315414  T
Q  101 cttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccct 162  Q
    ||||| ||||||||||||| |||||||||||||||||||||| |||||| ||||||||||||    
T  16315415 cttctgatcagtgttttcagcttaggagaaaacgaagaaaaacctaacacaattcaacccct 16315476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 10883948 - 10884108
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttg 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||  || || || ||||||||    
T  10883948 aggaacctgtataattgctttgtgtctttcttctttctctctctattttatccgctgctatttagttctcaaaatcacttcagaagcataactctatttg 10884047  T
Q  101 cttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||| |||||||||||    
T  10884048 cttctgatcagtgttttcagcttaggagaaaacaaagaaaaagctaacacaattcaacccc 10884108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 4 - 161
Target Start/End: Original strand, 13731455 - 13731614
Alignment:
Q  4 aacctgtataattgctttgtatctttcttctttctc--tctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgc 101  Q
    |||||||||||||||||||| |||||||||||||||  |||||||||||||| |||||| ||||||||||||||||||||  || || || |||||||||    
T  13731455 aacctgtataattgctttgtgtctttcttctttctctctctctgttttatccactgctacttagttctggaaatcacttcagaagcagaactctatttgc 13731554  T
Q  102 ttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    |||| ||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  13731555 ttctgatctgtgttttcagcttaggagaaaacgaagaaaaagctaacacaattcaacccc 13731614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 13302241 - 13302081
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttg 100  Q
    ||||||||||||||||||||||| |||||||||||||||||| | ||||||||||||||| ||||| || |||||||||||  || || || ||||||||    
T  13302241 aggaacctgtataattgctttgtgtctttcttctttctctctttattttatccgctgctacttagtgctagaaatcacttcagaagcagaactctatttg 13302142  T
Q  101 cttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||||| || |||||||||| |||||||||||||||||||||| |||||| |||||||||||    
T  13302141 cttctgataagtgttttcagcttaggagaaaacgaagaaaaaactaacacaattcaacccc 13302081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 3 - 141
Target Start/End: Complemental strand, 9069138 - 9069000
Alignment:
Q  3 gaacctgtataattgctttgtatctttcttctttctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgct 102  Q
    ||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||  || ||||| | ||||||||    
T  9069138 gaacctgtataatcgatttgtgtctttcttctttctctctctgttttatccgctgctatttagttatggaaatcacttcagaagcaaaactttatttgct 9069039  T
Q  103 tctaatcagtgttttcaacttaggagaaaacgaagaaaa 141  Q
    ||| ||||||||||||| |||||||||||||||||||||    
T  9069038 tctgatcagtgttttcagcttaggagaaaacgaagaaaa 9069000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 33604287 - 33604124
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctctg---ttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctat 97  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    ||||||||||||| | ||||||||| | ||||| ||  || || ||||||||    
T  33604287 aggaacctgtataattgctttgtgtctttcttctttctctctctccgtttttatccgctgcaagttagttctgaacatcacgtcagaagcagaattctat 33604188  T
Q  98 ttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||| |||| |||||||||||    
T  33604187 ttgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagccaacacaattcaacccc 33604124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 36 - 157
Target Start/End: Original strand, 2914469 - 2914589
Alignment:
Q  36 tctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttaggagaaaacga 135  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||  || || || ||||||||||||| ||||||||||||| |||||||| ||||||    
T  2914469 tctctctctgttttatccgctgctatttagttctggaaatctcttcagaagcagaactctatttgcttctgatcagtgttttcagcttaggag-aaacga 2914567  T
Q  136 agaaaaagctaacataattcaa 157  Q
    |||||||||||||| |||||||    
T  2914568 agaaaaagctaacacaattcaa 2914589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 21284151 - 21284312
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctctgtttt-atccgctgctatttagttctggaaatcacttcgaaaacaaaattctattt 99  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||| | ||| | ||||||||  ||| | || ||||| |    
T  21284151 aggaacatgtataattgctttgtgtctttcttctttctctctctgtttttatccgctgcaatttaatcctgaacatcacttcagaaatagaactctatct 21284250  T
Q  100 gcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    |||||| ||||||||||||| ||||||| |||||| ||||||||  |||| |||||||||||    
T  21284251 gcttctgatcagtgttttcagcttaggaaaaaacggagaaaaagtaaacacaattcaacccc 21284312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 24787741 - 24787580
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctct--gttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatt 98  Q
    ||||||||||||||||| | ||| ||||||||||||||||||||  |||||||||||||||| |||||| |||||||||||||  ||  | || ||||||    
T  24787741 aggaacctgtataattgttgtgtgtctttcttctttctctctctctgttttatccgctgctacttagttatggaaatcacttcagaagaagaactctatt 24787642  T
Q  99 tgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||| |||||| |||||||||| |||||||||||| |||||||| | ||| | |||||||||||    
T  24787641 tgc-tctaataagtgttttcagcttaggagaaaatgaagaaaaggttaatacaattcaacccc 24787580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 11318785 - 11318614
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctct----------gttttatccgctgctatttagttctggaaatcacttcgaaaacaaa 90  Q
    ||||||||||||||||||||||| ||||||||||||||||||||          |||||||||||| ||| ||||||||||||||||||||  || |  |    
T  11318785 aggaacctgtataattgctttgtgtctttcttctttctctctctctctctctctgttttatccgctactacttagttctggaaatcacttcagaagccga 11318686  T
Q  91 attctatttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccct 162  Q
    | ||||||| ||||| ||||||||||||| ||||| ||||||| || ||||||||| || ||||||||||||    
T  11318685 actctattttcttctgatcagtgttttcagcttagaagaaaactaaaaaaaagctagcacaattcaacccct 11318614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 36 - 161
Target Start/End: Original strand, 12367571 - 12367695
Alignment:
Q  36 tctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttaggagaaaacga 135  Q
    ||||||||||||||||||||||| ||||||| ||| | ||||||||  ||  | || ||||||||||||| ||||||||||||| |||||||||||||||    
T  12367571 tctctctctgttttatccgctgc-atttagtcctgaacatcacttcagaagaagaactctatttgcttctgatcagtgttttcaccttaggagaaaacga 12367669  T
Q  136 agaaaaagctaacataattcaacccc 161  Q
    |||||||| ||||| |||||||||||    
T  12367670 agaaaaagataacacaattcaacccc 12367695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 41843201 - 41843357
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttg 100  Q
    |||||| |||||||||||||||| | |||||||||||||||||||||||||  ||||| ||| ||||||| | ||||||||  ||  | || ||| | ||    
T  41843201 aggaacttgtataattgctttgtgtttttcttctttctctctctgttttatttgctgcaatt-agttctgaacatcacttcagaagtagaactctttctg 41843299  T
Q  101 cttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaac 158  Q
    ||||| ||||||||||||| |||| |||||||||||||||||| ||||| ||||||||    
T  41843300 cttctgatcagtgttttcagcttaagagaaaacgaagaaaaaggtaacacaattcaac 41843357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 36 - 161
Target Start/End: Complemental strand, 11792215 - 11792090
Alignment:
Q  36 tctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttaggagaaaacga 135  Q
    |||||||||||||||||||||||  |||||| ||| | ||||||||  ||  | ||  |||| ||||||| |||||||||||||||||||||||||||||    
T  11792215 tctctctctgttttatccgctgcattttagtcctgaacatcacttcagaagtagaacactatctgcttctgatcagtgttttcaacttaggagaaaacga 11792116  T
Q  136 agaaaaagctaacataattcaacccc 161  Q
    |||||||| ||||| |||||||||||    
T  11792115 agaaaaagataacacaattcaacccc 11792090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 14187069 - 14186906
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctctgt---tttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctat 97  Q
    |||||||||||||||| |||||| |||||||||||||||||||| |   |||||||||||| | ||| | ||| | ||||||||  ||  | ||||||||    
T  14187069 aggaacctgtataatttctttgtgtctttcttctttctctctctttgtttttatccgctgcaagttactcctgaacatcacttcagaagtagaattctat 14186970  T
Q  98 ttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
     ||||||| ||||||||||||| | |||||||||| ||||||||||  |||| |||||||||||    
T  14186969 ctgcttctgatcagtgttttcagcctaggagaaaaagaagaaaaagtaaacacaattcaacccc 14186906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 19328788 - 19328948
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctct-gttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctattt 99  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||  ||||||||||||| || |||| ||| | ||||||||  ||  | || ||||| |    
T  19328788 aggaatctgtataattgctttgtgtctttcttctttctctctctctttttatccgctgc-atctagtcctgaacatcacttcagaagtagaactctatct 19328886  T
Q  100 gcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    |||| | ||||||||||||| ||| |||||||| ||||||||||| |||| |||||||||||    
T  19328887 gcttgtgatcagtgttttcagctttggagaaaaagaagaaaaagccaacacaattcaacccc 19328948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 30025315 - 30025154
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctctgtttt-atccgctgctatttagttctggaaatcacttcgaaaacaaaattctattt 99  Q
    |||||| |||||||||| ||||| |||||||||||||||||| |||||| ||||||||| | ||||| ||| | ||||| ||  ||  | || | ||| |    
T  30025315 aggaacatgtataattgttttgtgtctttcttctttctctctatgtttttatccgctgcaagttagtcctgaacatcacatcataagtagaactttatct 30025216  T
Q  100 gcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    |||||| |||| |||||||| |||||||||||||||||||||||| |||| |||||||||||    
T  30025215 gcttctgatcaatgttttcagcttaggagaaaacgaagaaaaagcaaacacaattcaacccc 30025154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 36 - 159
Target Start/End: Original strand, 5001676 - 5001798
Alignment:
Q  36 tctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttaggagaaaacga 135  Q
    ||||||||||||||||||||||| |||||||  || | ||||||||  || || || | ||||||||||| ||||||| ||||| |||||||||||||||    
T  5001676 tctctctctgttttatccgctgc-atttagtcttgaacatcacttcagaagcagaactttatttgcttctgatcagtgctttcagcttaggagaaaacga 5001774  T
Q  136 agaaaaagctaacataattcaacc 159  Q
    ||||||||||||||||||| ||||    
T  5001775 agaaaaagctaacataatttaacc 5001798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 29936122 - 29936271
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttct--ttctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatt 98  Q
    ||||||||||||||||| ||||| ||||||||||  |||||||||||||| ||||||||| ||| |||  || | ||||||||  || || || ||||||    
T  29936122 aggaacctgtataattgttttgtgtctttcttctctttctctctctgtttcatccgctgc-attcagtcatgaacatcacttcagaagcagaactctatt 29936220  T
Q  99 tgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaaca 149  Q
    ||||||| |||| |||||||| |||| ||||||||||||||||||| ||||    
T  29936221 tgcttctgatcaatgttttcatcttacgagaaaacgaagaaaaagcaaaca 29936271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 32 - 161
Target Start/End: Complemental strand, 4493892 - 4493764
Alignment:
Q  32 tctttctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttaggagaaa 131  Q
    ||||||||||| | ||||||||||||| | |||||| || | ||||||||  ||  | || ||||| ||||||| ||||||||||||| |||||||||||    
T  4493892 tctttctctctat-ttttatccgctgcaagttagttatgaacatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaa 4493794  T
Q  132 acgaagaaaaagctaacataattcaacccc 161  Q
    |||||||||||||||||| |||||||||||    
T  4493793 acgaagaaaaagctaacacaattcaacccc 4493764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 14424689 - 14424527
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctctgt---tttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctat 97  Q
    ||||||||||| ||||||||||| ||||| |||||||||||||| |   |||||||||||| ||||||||| | | ||||||||  ||  | || || ||    
T  14424689 aggaacctgta-aattgctttgtgtcttttttctttctctctctctgtttttatccgctgcaatttagttccgaacatcacttcagaagtagaactcgat 14424591  T
Q  98 ttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
     ||||||| ||||||||||| |  ||||||||||||||||||||||  |||| |||||||||||    
T  14424590 ctgcttctgatcagtgtttttagattaggagaaaacgaagaaaaagtaaacacaattcaacccc 14424527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 36 - 156
Target Start/End: Original strand, 16317410 - 16317529
Alignment:
Q  36 tctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttaggagaaaacga 135  Q
    ||||||||| ||||||||||||| ||||||| ||| | ||||||||  || || || | ||||||||||| ||||||||||||| |||| ||||||||||    
T  16317410 tctctctctattttatccgctgc-atttagtcctgaacatcacttcagaagcagaactttatttgcttctgatcagtgttttcagcttatgagaaaacga 16317508  T
Q  136 agaaaaagctaacataattca 156  Q
    |||||||||||| || |||||    
T  16317509 agaaaaagctaatatgattca 16317529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 32 - 178
Target Start/End: Original strand, 13473297 - 13473442
Alignment:
Q  32 tctttctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttaggagaaa 131  Q
    ||||||||||||||||||||||||||| |||||||  || | ||||||||  ||  | || | ||| ||||||| ||||||||||||| |||||||||||    
T  13473297 tctttctctctctgttttatccgctgc-atttagtcttgaacatcacttcagaagtagaactatatctgcttctgatcagtgttttcagcttaggagaaa 13473395  T
Q  132 acgaagaaaaagctaacataattcaa-cccctttatgtatttttctca 178  Q
    ||||||||||| || ||| ||||||| ||||||  |||||||||||||    
T  13473396 acgaagaaaaaact-acacaattcaagccccttcttgtatttttctca 13473442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 161
Target Start/End: Original strand, 12175118 - 12175272
Alignment:
Q  4 aacctgtataattgctttgtatctttcttctttctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgctt 103  Q
    ||||||||||| |  ||||| ||||||||||  |||||||||||||||||||||| | | ||||||| | |||||||| |||  | || | ||| |||||    
T  12175118 aacctgtataaattgtttgtgtctttcttct--ctctctctgttttatccgctgcaact-agttctgaacatcacttcaaaagtagaaatttatctgctt 12175214  T
Q  104 ctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    || ||||||||||||||||| ||||||||  |||||||| | |||| |||||||||||    
T  12175215 ctgatcagtgttttcaactttggagaaaaacaagaaaaaaccaacacaattcaacccc 12175272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 4820867 - 4820706
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctct---gttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctat 97  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||    ||||||||||||| | ||||||||| | |||||||| |||  | || |||||    
T  4820867 aggaacctgtataattgctttgtgtctttcttccttctctctctctaattttatccgctgc-aattagttctgaacatcacttcaaaagtagaactctat 4820769  T
Q  98 ttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
     ||||||| || ||||||||| | ||| ||||||  ||| ||||||| |||| |||||||||||    
T  4820768 ctgcttctgattagtgttttc-agttatgagaaattgaataaaaagcaaacacaattcaacccc 4820706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 36 - 161
Target Start/End: Original strand, 35954725 - 35954849
Alignment:
Q  36 tctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttaggagaaaacga 135  Q
    |||||||||| |||||||||||| | | ||||||| | ||||||||  ||  |||| ||||| ||||||| ||||||||||||| |||||||||||| ||    
T  35954725 tctctctctgatttatccgctgcaact-agttctgaatatcacttcagaagtaaaactctatctgcttctgatcagtgttttcagcttaggagaaaaaga 35954823  T
Q  136 agaaaaagctaacataattcaacccc 161  Q
    ||||||||  |||| |||||||||||    
T  35954824 agaaaaagtcaacacaattcaacccc 35954849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 4832102 - 4832216
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctctg-ttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctattt 99  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||| | ||||||||| | ||||||||  ||  | || ||||| |    
T  4832102 aggaacctgtataattgctttgtgtctttcttccttctctctctgtttttatccgctgc-aattagttctgaacatcacttcagaagtagaactctatct 4832200  T
Q  100 gcttctaatcagtgtt 115  Q
    |||||| |||||||||    
T  4832201 gcttctgatcagtgtt 4832216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 36 - 161
Target Start/End: Original strand, 13259257 - 13259381
Alignment:
Q  36 tctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttaggagaaaacga 135  Q
    ||||||||||||||||||||||| ||||||| | | | |||||||   || || || |||||||  |||| ||||||||| ||| |||||||||||||||    
T  13259257 tctctctctgttttatccgctgc-atttagtccggaacatcactttagaagcagaactctatttatttctgatcagtgttgtcagcttaggagaaaacga 13259355  T
Q  136 agaaaaagctaacataattcaacccc 161  Q
    ||||||||  |||| |||||||||||    
T  13259356 agaaaaagaaaacacaattcaacccc 13259381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 44 - 161
Target Start/End: Original strand, 13261497 - 13261613
Alignment:
Q  44 tgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaag 143  Q
    ||||||||||||||| ||||||| | | | ||||||||  || || || ||||||||||||| |||| ||| |||| |||||||||||||||||||||||    
T  13261497 tgttttatccgctgc-atttagtccggaacatcacttcagaagcagaactctatttgcttctgatcaatgtgttcagcttaggagaaaacgaagaaaaag 13261595  T
Q  144 ctaacataattcaacccc 161  Q
      |||| |||||||||||    
T  13261596 aaaacacaattcaacccc 13261613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 44 - 160
Target Start/End: Original strand, 16310777 - 16310892
Alignment:
Q  44 tgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaag 143  Q
    ||||||||||||||| ||| ||| ||| | ||||||||  || || |||| ||||||||||| || |||||||||| || |||| |||||||| ||||||    
T  16310777 tgttttatccgctgc-attcagtcctgaacatcacttcagaagcagaattatatttgcttctgattagtgttttcagctaaggacaaaacgaaaaaaaag 16310875  T
Q  144 ctaacataattcaaccc 160  Q
    |||||| ||||||||||    
T  16310876 ctaacacaattcaaccc 16310892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 28623136 - 28623290
Alignment:
Q  1 aggaacctgtataa-ttgctttgtatctttcttctttctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctattt 99  Q
    |||||||| ||||| ||||||||| ||||||||||    |||||||||| ||||||| | || |||||||| | ||||||||  ||  | || ||||| |    
T  28623136 aggaacctatataaattgctttgtgtctttcttct----ctctctgttt-atccgctac-atctagttctgaacatcacttcagaagtagaactctatct 28623229  T
Q  100 gcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaaccc 160  Q
    |||||| |||||||| |||| |||||||||||| ||||||||||| |||| ||||||||||    
T  28623230 gcttctgatcagtgtgttcagcttaggagaaaaagaagaaaaagccaacacaattcaaccc 28623290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 99 - 161
Target Start/End: Original strand, 16546213 - 16546275
Alignment:
Q  99 tgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||||||| ||||||||||||| |||||||||||| ||||||||||| |||| |||||||||||    
T  16546213 tgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagccaacacaattcaacccc 16546275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 99 - 161
Target Start/End: Complemental strand, 16619449 - 16619387
Alignment:
Q  99 tgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||||||| ||||||||||||| |||||||||||| ||||||||||| |||| |||||||||||    
T  16619449 tgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagccaacacaattcaacccc 16619387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 93 - 157
Target Start/End: Complemental strand, 15467203 - 15467139
Alignment:
Q  93 tctatttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaa 157  Q
    ||||| ||||||| ||||||||||||| |||||||||||| |||||||||| ||||| |||||||    
T  15467203 tctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagataacacaattcaa 15467139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 16557480 - 16557548
Alignment:
Q  93 tctatttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||||| ||||||| ||||||||||||| ||||||||| || ||||||||||| |||| |||||||||||    
T  16557480 tctatctgcttctgatcagtgttttcagcttaggagataaagaagaaaaagccaacacaattcaacccc 16557548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 93 - 161
Target Start/End: Complemental strand, 16608182 - 16608114
Alignment:
Q  93 tctatttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||||| ||||||| ||||||||||||| ||||||||| || ||||||||||| |||| |||||||||||    
T  16608182 tctatctgcttctgatcagtgttttcagcttaggagataaagaagaaaaagccaacacaattcaacccc 16608114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 2499443 - 2499400
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctct 44  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  2499443 aggaacctgtataaatgctttgtatctttcttctttctctctct 2499400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 36 - 142
Target Start/End: Original strand, 13034666 - 13034772
Alignment:
Q  36 tctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttaggagaaaacga 135  Q
    ||||||||||||||||||||||| | |||||  || | ||||||||  ||  | || | ||| ||||||| ||||||||||||| |||||||||||| ||    
T  13034666 tctctctctgttttatccgctgcaacttagtcatgaacatcacttcagaagtagaactgtatctgcttctgatcagtgttttcagcttaggagaaaatga 13034765  T
Q  136 agaaaaa 142  Q
    |||||||    
T  13034766 agaaaaa 13034772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 132
Target Start/End: Original strand, 16155529 - 16155649
Alignment:
Q  13 aattgctttgtatctttct--tctttctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatca 110  Q
    ||||||||||| |||||||  |||||||||||||| |||||| ||||| | | ||||||  | ||||||||  ||  | |||||||| ||||||| || |    
T  16155529 aattgctttgtgtctttctcttctttctctctctgatttatctgctgcaact-agttctaaatatcacttcagaagtagaattctatctgcttctgatta 16155627  T
Q  111 gtgttttcaacttaggagaaaa 132  Q
    ||||||||||||||||||||||    
T  16155628 gtgttttcaacttaggagaaaa 16155649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 161
Target Start/End: Complemental strand, 21691706 - 21691644
Alignment:
Q  99 tgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||||||| ||||||||||||| |||||||||||| | ||||||||| |||| |||||||||||    
T  21691706 tgcttctgatcagtgttttcagcttaggagaaaatgtagaaaaagccaacacaattcaacccc 21691644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 93 - 179
Target Start/End: Complemental strand, 2499316 - 2499228
Alignment:
Q  93 tctatttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaa--cccctttatgtatttttctcac 179  Q
    ||||| ||||||| || |||||||||| |||||||||||| |||||||||| ||||| |||||||  ||||||  ||| ||||||||||    
T  2499316 tctatctgcttctgattagtgttttcagcttaggagaaaatgaagaaaaagttaacacaattcaatcccccttcttgtgtttttctcac 2499228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 36 - 161
Target Start/End: Original strand, 48237649 - 48237773
Alignment:
Q  36 tctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttaggagaaaacga 135  Q
    ||||||||||||||||||| ||| || |||||||| |  |||||||  ||  | || ||||| | ||||| ||||||||||||| |||| ||||||| ||    
T  48237649 tctctctctgttttatccgatgc-atctagttctgaacttcacttcagaagtagaactctatctacttctgatcagtgttttcagcttaagagaaaaaga 48237747  T
Q  136 agaaaaagctaacataattcaacccc 161  Q
    ||||||||  |||| |||||||||||    
T  48237748 agaaaaagtcaacacaattcaacccc 48237773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 159
Target Start/End: Original strand, 9710648 - 9710770
Alignment:
Q  36 tctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtg-ttttcaacttaggagaaaacg 134  Q
    ||||||||||||||||||||||| || |||||||| | ||||||||  ||  | || ||||| ||||||| ||||||| |||||| |||||||||||| |    
T  9710648 tctctctctgttttatccgctgc-atctagttctgaacatcacttcagaagtagaactctatctgcttctgatcagtgtttttcagcttaggagaaaaag 9710746  T
Q  135 aagaaaaagctaacataattcaacc 159  Q
    ||  |||||| |||| |||||||||    
T  9710747 aa-taaaagcaaacacaattcaacc 9710770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 93 - 161
Target Start/End: Complemental strand, 13879431 - 13879363
Alignment:
Q  93 tctatttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||||| ||||||| ||||||||||||| | || ||||||| ||||||||||| |||| |||||||||||    
T  13879431 tctatctgcttctgatcagtgttttcagcataagagaaaaagaagaaaaagcaaacacaattcaacccc 13879363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 15705364 - 15705431
Alignment:
Q  93 tctatttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||||||||||||| ||| |||||||||  ||||||||||| ||||||||||| |||| |||||||||||    
T  15705364 tctatttgcttctgatctgtgttttcag-ttaggagaaaaagaagaaaaagccaacacaattcaacccc 15705431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 2914388 - 2914431
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctct 44  Q
    |||||||| |||||||||||||| ||||||||||||||||||||    
T  2914388 aggaacctatataattgctttgtgtctttcttctttctctctct 2914431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 4493955 - 4493912
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctct 44  Q
    ||||||||||||||||||||||| |||||||||| |||||||||    
T  4493955 aggaacctgtataattgctttgtgtctttcttctctctctctct 4493912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 5001603 - 5001646
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctct 44  Q
    ||||||||||||||||||||||| |||||||||| |||||||||    
T  5001603 aggaacctgtataattgctttgtgtctttcttctctctctctct 5001646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 13027676 - 13027719
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctct 44  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  13027676 aggaacctgtatacttgctttgtgtctttcttctttctctctct 13027719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 13034615 - 13034658
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctct 44  Q
    |||||||||||||||| |||||| ||||||||||||||||||||    
T  13034615 aggaacctgtataatttctttgtgtctttcttctttctctctct 13034658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 13879550 - 13879507
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctct 44  Q
    ||||||||||||||||||||||| |||||||||| |||||||||    
T  13879550 aggaacctgtataattgctttgtgtctttcttctatctctctct 13879507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 179
Target Start/End: Original strand, 33692536 - 33692681
Alignment:
Q  36 tctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgtttt-caacttaggagaaaacg 134  Q
    |||||||||||||||| |||||| || |||||||| | ||||||||  ||    || ||||| | ||||| |||| |||||| || |||||||||||| |    
T  33692536 tctctctctgttttattcgctgc-atctagttctgaacatcacttcagaagtggaactctatctacttctgatcaatgtttttcagcttaggagaaaagg 33692634  T
Q  135 aagaaaaagctaacataattcaa--cccctttatgtatttttctcac 179  Q
    ||||||||| ||||| |||||||  ||||||| ||| ||||||||||    
T  33692635 aagaaaaagttaacacaattcaactcccctttttgtgtttttctcac 33692681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 44466474 - 44466431
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctct 44  Q
    ||||||||||||||||||||||| |||||||||| |||||||||    
T  44466474 aggaacctgtataattgctttgtgtctttcttctctctctctct 44466431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 331031 - 330974
Alignment:
Q  1 aggaacctgtataa-ttgctttgtatctttcttctttctctctctgttttatccgctgc 58  Q
    |||||||||||||| |||||| || |||||||||||| |||||||||||||||||||||    
T  331031 aggaacctgtataaattgctt-gtgtctttcttctttttctctctgttttatccgctgc 330974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 93 - 159
Target Start/End: Original strand, 13027821 - 13027887
Alignment:
Q  93 tctatttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacc 159  Q
    ||||| ||||||| |||| |||||||  |||||||||||| ||||||||||| |||| |||||||||    
T  13027821 tctatctgcttctgatcaatgttttcggcttaggagaaaatgaagaaaaagcaaacacaattcaacc 13027887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 15087931 - 15087771
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttg 100  Q
    |||||||||||||||| |||||| || ||||||| ||||||| | ||||||||||||| || |||| ||| | ||||||||  ||  | || ||||| ||    
T  15087931 aggaacctgtataatttctttgtgtccttcttctctctctctgt-ttttatccgctgc-atctagtcctgaacatcacttcagaagtagaactctatctg 15087834  T
Q  101 cttctaatc-agtgttttcaacttaggag-aaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||||| ||| |||||||||| |||| ||| |||| ||||||||||  |||| | |||||||||    
T  15087833 cttctgatcaagtgttttcagcttatgagaaaaaagaagaaaaagtcaacacagttcaacccc 15087771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 19711788 - 19711860
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttc--tctctctgttttatccgctgctatttagttctgga 72  Q
    ||||||| ||||||||||||||| ||| |||||| ||  ||||||||||||||||||||| || ||||||||||    
T  19711788 aggaaccagtataattgctttgtgtctctcttctctccttctctctgttttatccgctgc-atctagttctgga 19711860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 107 - 161
Target Start/End: Original strand, 22580138 - 22580192
Alignment:
Q  107 atcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||||||||||||| | |||||||||| ||||||||||| |||| |||||||||||    
T  22580138 atcagtgttttcagcataggagaaaaagaagaaaaagccaacacaattcaacccc 22580192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 12367514 - 12367547
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttct 34  Q
    ||||||||||||||||||||||||||||||||||    
T  12367514 aggaacctgtataattgctttgtatctttcttct 12367547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 13138673 - 13138718
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctctgt 46  Q
    ||||||||||||||||||||||| |||||| ||| |||||||||||    
T  13138673 aggaacctgtataattgctttgtgtctttcctctctctctctctgt 13138718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 13138795 - 13138863
Alignment:
Q  93 tctatttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||||| ||||||| |||| |||||||| | || ||||||| ||||||||||| |||| |||||||||||    
T  13138795 tctatctgcttctgatcaatgttttcagcataagagaaaaagaagaaaaagccaacacaattcaacccc 13138863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 159
Target Start/End: Original strand, 13902553 - 13902589
Alignment:
Q  123 taggagaaaacgaagaaaaagctaacataattcaacc 159  Q
    ||||||||||||||||||||||||||| |||||||||    
T  13902553 taggagaaaacgaagaaaaagctaacacaattcaacc 13902589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 15574478 - 15574545
Alignment:
Q  93 tctatttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||||| ||||||| ||| || ||||||| ||||||||||| ||||||||||| |||| |||||||||||    
T  15574478 tctatctgcttctgatctgtattttcaa-ttaggagaaaaagaagaaaaagccaacacaattcaacccc 15574545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 161
Target Start/End: Original strand, 23280846 - 23280914
Alignment:
Q  94 ctatttgcttctaatcagtgtttt-caacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    |||| ||||||| ||||||||||| || |||||||||||| ||||||||| |||||| ||||| |||||    
T  23280846 ctatctgcttctgatcagtgtttttcagcttaggagaaaaagaagaaaaatctaacacaattctacccc 23280914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 9099007 - 9099050
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctct 44  Q
    |||||||| |||||||||||||| |||||||||| |||||||||    
T  9099007 aggaacctctataattgctttgtgtctttcttctctctctctct 9099050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 9099813 - 9099856
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctct 44  Q
    |||||||| |||||||||||||| |||||||||| |||||||||    
T  9099813 aggaacctctataattgctttgtgtctttcttctctctctctct 9099856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 11792290 - 11792247
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctct 44  Q
    ||||||||||||||||| ||||| |||||||||| |||||||||    
T  11792290 aggaacctgtataattgttttgtgtctttcttctctctctctct 11792247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 16317331 - 16317374
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctct 44  Q
    |||||||||||| |||||||||| |||||||||| |||||||||    
T  16317331 aggaacctgtatgattgctttgtgtctttcttctctctctctct 16317374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 21211321 - 21211364
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctct 44  Q
    |||||| |||||||||||||||| |||||||||| |||||||||    
T  21211321 aggaacttgtataattgctttgtgtctttcttctctctctctct 21211364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 162
Target Start/End: Original strand, 21211476 - 21211515
Alignment:
Q  123 taggagaaaacgaagaaaaagctaacataattcaacccct 162  Q
    |||||||||||||| |||||||||||| ||||||||||||    
T  21211476 taggagaaaacgaataaaaagctaacacaattcaacccct 21211515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 132
Target Start/End: Original strand, 30946276 - 30946315
Alignment:
Q  93 tctatttgcttctaatcagtgttttcaacttaggagaaaa 132  Q
    ||||| |||||||||||||||| |||||||||||||||||    
T  30946276 tctatctgcttctaatcagtgtattcaacttaggagaaaa 30946315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 39285280 - 39285323
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctct 44  Q
    ||||||||||||||||| ||||| |||||||||| |||||||||    
T  39285280 aggaacctgtataattgttttgtgtctttcttctctctctctct 39285323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 159
Target Start/End: Complemental strand, 1292312 - 1292275
Alignment:
Q  122 ttaggagaaaacgaagaaaaagctaacataattcaacc 159  Q
    ||||||||||| |||||||||||||||| |||||||||    
T  1292312 ttaggagaaaaagaagaaaaagctaacacaattcaacc 1292275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 16310684 - 16310717
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttct 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  16310684 aggaacctgtataattgctttgtgtctttcttct 16310717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 9710580 - 9710624
Alignment:
Q  1 aggaacctgtataa-ttgctttgtatctttcttctttctctctct 44  Q
    |||||||||||||| ||||||||| |||||||||| |||||||||    
T  9710580 aggaacctgtataaattgctttgtgtctttcttctctctctctct 9710624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 44
Target Start/End: Original strand, 13902396 - 13902432
Alignment:
Q  8 tgtataattgctttgtatctttcttctttctctctct 44  Q
    |||||||||||||||| |||||||||| |||||||||    
T  13902396 tgtataattgctttgtttctttcttctctctctctct 13902432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 16557365 - 16557409
Alignment:
Q  1 aggaacctgtataa-ttgctttgtatctttcttctttctctctct 44  Q
    |||||||||||||| ||||||||| |||||||||| |||||||||    
T  16557365 aggaacctgtataaattgctttgtgtctttcttctctctctctct 16557409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 16608297 - 16608253
Alignment:
Q  1 aggaacctgtataa-ttgctttgtatctttcttctttctctctct 44  Q
    |||||||||||||| ||||||||| |||||||||| |||||||||    
T  16608297 aggaacctgtataaattgctttgtgtctttcttctctctctctct 16608253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 160
Target Start/End: Complemental strand, 33421035 - 33420976
Alignment:
Q  100 gcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaaccc 160  Q
    |||||| ||| |||||||||  ||||||||||| ||||||||||| |||| ||||||||||    
T  33421035 gcttctgatctgtgttttcag-ttaggagaaaaagaagaaaaagccaacacaattcaaccc 33420976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 115; Significance: 2e-58; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 24575414 - 24575253
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctct--ctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatt 98  Q
    ||||||| ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||  || ||||| ||||||    
T  24575414 aggaaccagtataattgctttgtatctttcttctttctctatctctgttttatccgctgctatttagttctggaaatcacttcagaagcaaaactctatt 24575315  T
Q  99 tgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaaccc 160  Q
    ||||||| ||||||||||||| |||||||||||| |||||||||||||||| ||||||||||    
T  24575314 tgcttctgatcagtgttttcagcttaggagaaaatgaagaaaaagctaacacaattcaaccc 24575253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 20569471 - 20569629
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttg 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||  |||||||| ||||||||||||||||||||||||||  || || || ||||||||    
T  20569471 aggaacctgtataattgctttgtgtctttcttctttctctctct--tttatccgttgctatttagttctggaaatcacttcagaagcataactctatttg 20569568  T
Q  101 cttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||||| ||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||    
T  20569569 cttctgatcagtgttttcagcttaggagaaaacgaagaaaaagttaacacaattcaacccc 20569629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 10010472 - 10010648
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttg 100  Q
    ||||||||||||||||||||||| ||||||||||  |||||||||||||||||||||||||||||||||| | |||||||   || || || ||||||||    
T  10010472 aggaacctgtataattgctttgtgtctttcttct--ctctctctgttttatccgctgctatttagttctgaacatcactttagaagcagaactctatttg 10010569  T
Q  101 cttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccctttatgtatttttctcac 179  Q
    ||||| ||||||||||||| |||||||||||||||| ||||| |||||| |||| ||||||||  | ||||||||||||    
T  10010570 cttctgatcagtgttttcagcttaggagaaaacgaaaaaaaaactaacacaatttaaccccttcttatatttttctcac 10010648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 25828542 - 25828374
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctct--------gttttatccgctgctatttagttctggaaatcacttcgaaaacaaaat 92  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||   || || ||     
T  25828542 aggaacctgtataattggtttgtgtctttcttctttctctctctctctctctgttttatccgctgctatttagttctggaaatcactttagaagcataaa 25828443  T
Q  93 tctatttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||||||||||||| ||||||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  25828442 tctatttgcttctgatcagtgtttttaccttaggagaaaacgaagaaaaagctaacataattcaacccc 25828374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 39038362 - 39038517
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttg 100  Q
    |||||| |||||||||| ||||||||||||||||  |||||||||||||||||||||| |||||||  || | ||||||||  ||  | || ||||| ||    
T  39038362 aggaacatgtataattgatttgtatctttcttct--ctctctctgttttatccgctgcaatttagtcttgaacatcacttcagaagtataactctatctg 39038459  T
Q  101 cttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaac 158  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  39038460 cttctgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaattcaac 39038517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 36 - 161
Target Start/End: Original strand, 17964058 - 17964183
Alignment:
Q  36 tctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttaggagaaaacga 135  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||  || || || |||||||| || | ||||||||||||| |||||||||||||||    
T  17964058 tctctctctgttttatctgctgctatttagttctggaaatcacctcagaagcagaactctatttgtttatgatcagtgttttcagcttaggagaaaacga 17964157  T
Q  136 agaaaaagctaacataattcaacccc 161  Q
    |||||||| ||||| |||||||||||    
T  17964158 agaaaaagttaacacaattcaacccc 17964183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 21537906 - 21538087
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctct--gttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatt 98  Q
    ||||||||||||||||||||||| ||||||||||||||||||||  |||||||| ||||| |||||||  || | ||||||||  ||  | || |||||     
T  21537906 aggaacctgtataattgctttgtgtctttcttctttctctctctctgttttatctgctgc-atttagtcatgaacatcacttcagaagtagaactctatc 21538004  T
Q  99 tgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacc--cctttatgtatttttctcac 179  Q
    |||||||||||| |||||||| |||| ||||||||||||||||||| |||| ||||||| |  ||||  ||||||||||||||    
T  21538005 tgcttctaatcaatgttttcagcttaagagaaaacgaagaaaaagcaaacacaattcaatcttccttcttgtatttttctcac 21538087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 42 - 161
Target Start/End: Complemental strand, 22257528 - 22257409
Alignment:
Q  42 tctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaa 141  Q
    |||||||||||||| |||||||||||||||||||||||||  || || || ||||||||||||| || |||||||||| ||| |||||||| ||||||||    
T  22257528 tctgttttatccgcagctatttagttctggaaatcacttcagaagcataactctatttgcttctgataagtgttttcagctttggagaaaatgaagaaaa 22257429  T
Q  142 agctaacataattcaacccc 161  Q
    |||||||| |||| ||||||    
T  22257428 agctaacacaattgaacccc 22257409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 38631133 - 38630981
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctct----gttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattcta 96  Q
    |||||| |||||||||| ||||| |||||||||| |||||||||    |||||||||||||||| ||||||| |||||||| ||   || || |||| ||    
T  38631133 aggaacttgtataattgttttgtgtctttcttctctctctctctctctgttttatccgctgctacttagttccggaaatcattttagaagcagaattgta 38631034  T
Q  97 tttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaaca 149  Q
    ||||||||| ||||||||||||| |||||||||||||||| |||||| |||||    
T  38631033 tttgcttctgatcagtgttttcagcttaggagaaaacgaaaaaaaagttaaca 38630981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 36 - 161
Target Start/End: Complemental strand, 24778675 - 24778551
Alignment:
Q  36 tctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttaggagaaaacga 135  Q
    ||||||||||||||||||||||| ||||||| ||| | ||||||||  || || || ||||||||||||| ||||||||||||| |||||||| ||||||    
T  24778675 tctctctctgttttatccgctgc-atttagtcctgaacatcacttcagaagcataactctatttgcttctgatcagtgttttcagcttaggagtaaacga 24778577  T
Q  136 agaaaaagctaacataattcaacccc 161  Q
    ||||||||| |||| |||||||||||    
T  24778576 agaaaaagccaacacaattcaacccc 24778551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 22455680 - 22455839
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttg 100  Q
    |||||| |||||||||||||||| ||||||| || | ||||||| ||||||| ||||| |||||||  || | ||||||||  ||  | || ||||| ||    
T  22455680 aggaacatgtataattgctttgtgtctttctcctctttctctct-ttttatctgctgcaatttagtcatgaacatcacttcagaagtagaactctatctg 22455778  T
Q  101 cttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||||| ||||||||||| | ||||||||||||||||||||||||||||| |||||||||||    
T  22455779 cttctgatcagtgttttgagcttaggagaaaacgaagaaaaagctaacacaattcaacccc 22455839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 44 - 160
Target Start/End: Original strand, 24851436 - 24851551
Alignment:
Q  44 tgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaag 143  Q
    ||||||||||||||| ||||||||||| | ||||||||  ||  | || ||||| ||||||| ||||||||||||| |||||||||||||||||||||||    
T  24851436 tgttttatccgctgc-atttagttctgaacatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaag 24851534  T
Q  144 ctaacataattcaaccc 160  Q
    | |||| ||||||||||    
T  24851535 caaacacaattcaaccc 24851551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 36 - 160
Target Start/End: Complemental strand, 40780653 - 40780530
Alignment:
Q  36 tctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttaggagaaaacga 135  Q
    ||||||| |||||||| |||||| |||||||  || | ||||||||  || || || ||||||||||||| ||||||||||||| |||||||||||||||    
T  40780653 tctctctgtgttttatgcgctgc-atttagtcttgaacatcacttcagaagcagaactctatttgcttctgatcagtgttttcagcttaggagaaaacga 40780555  T
Q  136 agaaaaagctaacataattcaaccc 160  Q
    ||||||| |||||| ||||||||||    
T  40780554 agaaaaaactaacacaattcaaccc 40780530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 26367128 - 26367185
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctctgttttatccgctgc 58  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26367128 aggaacttgtataattgctttgtatctttcttctttctctctctgttttatccgctgc 26367185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 25188778 - 25188622
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttg 100  Q
    ||||||||||||| ||| ||||| ||||||||||    |||||||||||||||||||| |||   | ||  | ||||||||  ||    || ||||| ||    
T  25188778 aggaacctgtatacttgttttgtgtctttcttct----ctctctgttttatccgctgcaattagatcctaaacatcacttcagaagtggaactctatctg 25188683  T
Q  101 cttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||| ||||    
T  25188682 cttctgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaattcaccccc 25188622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 28141322 - 28141390
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctctgttttatccgctgctatttagttct 69  Q
    |||||| ||||||||| |||||| | |||||||||||||||||||||||||||| ||||||||||||||    
T  28141322 aggaacatgtataattactttgtgtatttcttctttctctctctgttttatccgttgctatttagttct 28141390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 28 - 161
Target Start/End: Original strand, 45087744 - 45087877
Alignment:
Q  28 ttcttctt-tctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttagg 126  Q
    |||||||| ||||||||||||||||||| ||| | | ||||||| | ||||||||  ||  | || ||||| ||||||| ||||||||||||| ||||||    
T  45087744 ttcttcttctctctctctgttttatccgttgcaact-agttctgaacatcacttcagaagtataaatctatctgcttctgatcagtgttttcagcttagg 45087842  T
Q  127 agaaaacgaagaaaaagctaacataattcaacccc 161  Q
    |||||| ||||||||||  |||| |||||||||||    
T  45087843 agaaaaagaagaaaaagaaaacacaattcaacccc 45087877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 157
Target Start/End: Original strand, 22188826 - 22188983
Alignment:
Q  4 aacctgtataattgctttgtatctttcttctttctct----ctctgtttt-atccgctgctatttagttctggaaatcacttcgaaaacaaaattctatt 98  Q
    |||||||||||||||||||| |||||||||| |||||    ||||||||| ||||||||| || |||||||| | ||||||||  ||  | || | |||     
T  22188826 aacctgtataattgctttgtgtctttcttctctctctttctctctgtttttatccgctgc-atctagttctgaacatcacttcagaagtagaactatatc 22188924  T
Q  99 tgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaa 157  Q
    ||||||| ||||||||||||| | |||||||||| ||||||||| | |||| |||||||    
T  22188925 tgcttctgatcagtgttttcagcataggagaaaaagaagaaaaaaccaacacaattcaa 22188983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 22316972 - 22316915
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctctgttttatccgctgc 58  Q
    |||||| |||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  22316972 aggaacttgtataattgctttgtgtctttcttctttctctctctattttatccgctgc 22316915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 28702036 - 28702104
Alignment:
Q  93 tctatttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||||||||||||| ||||||||||||| |||||||||||| ||||||||||  |||| |||||||||||    
T  28702036 tctatttgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagaaaacacaattcaacccc 28702104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 88 - 161
Target Start/End: Complemental strand, 27294784 - 27294711
Alignment:
Q  88 aaaattctatttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    |||| ||||| || |||| ||||||||||| | |||||||||||||||||||||| |||||| |||||||||||    
T  27294784 aaaaatctatatgtttctgatcagtgtttttagcttaggagaaaacgaagaaaaaactaacacaattcaacccc 27294711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 19539796 - 19539713
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctt--tctctctctg-ttttatccgctgctatttagttctggaaatcacttc 81  Q
    ||||||||||||||||||||||| |||||||||||  |||||||||| ||||||||||||| || |||| ||| | ||||||||    
T  19539796 aggaacctgtataattgctttgtgtctttcttcttcctctctctctgtttttatccgctgcaatctagtcctgaacatcacttc 19539713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 93 - 146
Target Start/End: Original strand, 20152806 - 20152859
Alignment:
Q  93 tctatttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagcta 146  Q
    ||||| ||||||| || ||||||||||||||||||||||| |||||||||||||    
T  20152806 tctatctgcttctgattagtgttttcaacttaggagaaaaagaagaaaaagcta 20152859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 158
Target Start/End: Original strand, 13964801 - 13964860
Alignment:
Q  99 tgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaac 158  Q
    ||||||| ||||||||||||| |||||||||||| ||||||||| | |||| ||||||||    
T  13964801 tgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaaacaaacacaattcaac 13964860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 63 - 161
Target Start/End: Original strand, 31801667 - 31801765
Alignment:
Q  63 tagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    |||||||| | |||||||  ||| || || ||||| ||||||| ||||||||||||| ||||||| | || ||||||||| | |||| |||||||||||    
T  31801667 tagttctgaacatcactttaaaagcagaactctatctgcttctgatcagtgttttcagcttaggaaagaaagaagaaaaaaccaacacaattcaacccc 31801765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 158
Target Start/End: Original strand, 28712518 - 28712583
Alignment:
Q  93 tctatttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaac 158  Q
    ||||| ||||||| |||| |||||||| ||||||||||||  |||||||||  |||||||||||||    
T  28712518 tctatctgcttctgatcaatgttttcagcttaggagaaaaataagaaaaagaaaacataattcaac 28712583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 161
Target Start/End: Original strand, 18377063 - 18377103
Alignment:
Q  121 cttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    |||||||||||||||||||||| |||||| |||||||||||    
T  18377063 cttaggagaaaacgaagaaaaaactaacacaattcaacccc 18377103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 44839813 - 44839653
Alignment:
Q  1 aggaacctgtataa-ttgctttgtatctttcttctttct--ctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctat 97  Q
    |||||||||||||| |||||| || |||||||||| |||  |||||||||||||||||||| ||||||||||| | |||  |||  ||  | || |||||    
T  44839813 aggaacctgtataaattgctt-gtgtctttcttctctctttctctctgttttatccgctgc-atttagttctgaacatcttttcagaagtagaactctat 44839716  T
Q  98 ttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
     ||||||||| | |  ||||| | ||||||||||| ||||||||| | |||| |||||||||||    
T  44839715 ctgcttctaaactgcattttc-agttaggagaaaaagaagaaaaatcaaacacaattcaacccc 44839653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 23234389 - 23234346
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctct 44  Q
    ||||||||||||||||||||||| || ||||||| |||||||||    
T  23234389 aggaacctgtataattgctttgtgtcattcttctctctctctct 23234346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 24376486 - 24376451
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttcttt 36  Q
    ||||||||||||||||||||||| ||||||||||||    
T  24376486 aggaacctgtataattgctttgtgtctttcttcttt 24376451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 161
Target Start/End: Original strand, 22782473 - 22782511
Alignment:
Q  123 taggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    |||||||||| |||||||||||||||| |||||||||||    
T  22782473 taggagaaaaagaagaaaaagctaacacaattcaacccc 22782511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 161
Target Start/End: Original strand, 23185172 - 23185210
Alignment:
Q  123 taggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    |||||||||| |||||||||||||||| |||||||||||    
T  23185172 taggagaaaaagaagaaaaagctaacacaattcaacccc 23185210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 161
Target Start/End: Original strand, 23596435 - 23596473
Alignment:
Q  123 taggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    |||||||||| |||||||||||||||| |||||||||||    
T  23596435 taggagaaaaagaagaaaaagctaacacaattcaacccc 23596473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 161
Target Start/End: Complemental strand, 24376384 - 24376338
Alignment:
Q  115 tttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||||| ||||||||||||||||||||||  ||||| |||||||||||    
T  24376384 tttcagcttaggagaaaacgaagaaaaacttaacacaattcaacccc 24376338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 67
Target Start/End: Complemental strand, 27296813 - 27296756
Alignment:
Q  12 taattgctttgtatctttcttct--ttctctctctgttttatccgctgctatttagtt 67  Q
    |||||||||||| ||||||||||  ||| |||||||||||||||||||| | ||||||    
T  27296813 taattgctttgtgtctttcttctctttccctctctgttttatccgctgcaagttagtt 27296756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 161
Target Start/End: Original strand, 31328729 - 31328853
Alignment:
Q  36 tctctctctgtttt-atccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttaggagaaaacg 134  Q
    |||||||||||||| ||||||||| ||| ||||||| | |||||||   ||  |||| | ||| ||||||||| |||||||||||  | ||||||||| |    
T  31328729 tctctctctgtttttatccgctgcaatt-agttctgaacatcacttatgaagtaaaactttatctgcttctaaacagtgttttcagat-aggagaaaaag 31328826  T
Q  135 aagaaaaagctaacataattcaacccc 161  Q
    |||||||| | |||| |||||||||||    
T  31328827 aagaaaaaacaaacacaattcaacccc 31328853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 161
Target Start/End: Original strand, 31335450 - 31335574
Alignment:
Q  36 tctctctctgtttt-atccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttaggagaaaacg 134  Q
    |||||||||||||| ||||||||| ||| ||||||| | |||||||   ||  |||| | ||| ||||||||| |||||||||||  | ||||||||| |    
T  31335450 tctctctctgtttttatccgctgcaatt-agttctgaacatcacttatgaagtaaaactttatctgcttctaaacagtgttttcagat-aggagaaaaag 31335547  T
Q  135 aagaaaaagctaacataattcaacccc 161  Q
    |||||||| | |||| |||||||||||    
T  31335548 aagaaaaaacaaacacaattcaacccc 31335574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 16494727 - 16494657
Alignment:
Q  1 aggaacctgtataa-ttgctttgtatctttcttctttct--ctctctgttttatccgctgctatttagttctg 70  Q
    |||||||||||||| |||||| || |||||||||| |||  |||||||||||||||||||| |||||||||||    
T  16494727 aggaacctgtataaattgctt-gtgtctttcttctctctttctctctgttttatccgctgc-atttagttctg 16494657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 21845542 - 21845485
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctctgttttatccgctgc 58  Q
    |||||| ||||||||||||||||||||||||  | |||||||||   |||||||||||    
T  21845542 aggaacttgtataattgctttgtatctttctcttctctctctctacattatccgctgc 21845485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 161
Target Start/End: Complemental strand, 6391954 - 6391886
Alignment:
Q  93 tctatttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||||| ||||||| ||||||||||||| |||| || | || ||||||||| | |||| |||||||||||    
T  6391954 tctatatgcttctgatcagtgttttcagcttaagaaagaaagaagaaaaaaccaacacaattcaacccc 6391886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 106; Significance: 4e-53; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 6513187 - 6513348
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttg 100  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  || || || ||||||||    
T  6513187 aggaacctgtataattgttttgtgtctttcttctttctctctctgttttatccgctgctacttagttctggaaatcacttcagaagcagaactctatttg 6513286  T
Q  101 cttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccct 162  Q
    ||| | ||||||||||||| |||| ||||||||||||||||||| |||| ||||||||||||    
T  6513287 cttatgatcagtgttttcagcttaagagaaaacgaagaaaaagccaacacaattcaacccct 6513348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 6498694 - 6498534
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttg 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | ||||| ||| | ||||||||  ||  | || ||||| ||    
T  6498694 aggaacctgtataattgctttgtgtctttcttctttctctctctgttttatccgctgcaacttagtcctgaacatcacttcagaagtagaactctatctg 6498595  T
Q  101 cttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  6498594 cttctaatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaattcaacccc 6498534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 17814345 - 17814186
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctct--gttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatt 98  Q
    ||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||| |||||||||||||  || || |||| ||||    
T  17814345 aggaacctgtataattgctttgtgtctttcttctttctctctctctgttttatccgctgctatttagttatggaaatcacttcagaagcagaattttatt 17814246  T
Q  99 tgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaac 158  Q
    |||||   |||| |||||||| ||||| |||||||||||||||| |||||| ||||||||    
T  17814245 tgctttcgatcaatgttttcagcttagaagaaaacgaagaaaaaactaacacaattcaac 17814186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 23413730 - 23413890
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctc--tgtttt-atccgctgctatttagttctggaaatcacttcgaaaacaaaattctat 97  Q
    ||||||||||||||||||||||| |||||||||||||||||||  |||||| ||||||||| || ||||  || | |||||||| ||| || || |||||    
T  23413730 aggaacctgtataattgctttgtgtctttcttctttctctctccctgtttttatccgctgcaatctagtcatgaacatcacttcaaaagcagaactctat 23413829  T
Q  98 ttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaac 158  Q
    || |||||  |||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  23413830 ttacttctggtcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaattcaac 23413890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 21075939 - 21076099
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctct--gttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatt 98  Q
    ||||| ||||||||||| ||||| |||||||||| |||||||||  |||||||||||||| ||||||||||| | ||||||||  ||  | || || ||     
T  21075939 aggaatctgtataattgttttgtgtctttcttctctctctctctctgttttatccgctgc-atttagttctgaacatcacttcagaagtagaactcaatc 21076037  T
Q  99 tgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaaccc 160  Q
    ||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  21076038 tgcttctgatcagtgttatcagcttaggagaaaacgaagaaaaagctaacataattcaaccc 21076099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 7746450 - 7746613
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctctgt---tttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctat 97  Q
    ||||||||||||||||||||||| |||||||||||||||||||| |   |||||||||| | | ||||| ||| | ||||||||  ||  | || |||||    
T  7746450 aggaacctgtataattgctttgtgtctttcttctttctctctctctgtttttatccgctacaagttagtcctgaacatcacttcagaagtagaactctat 7746549  T
Q  98 ttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
     ||||||| ||||||||||||| |||||||||||||||||||||||| |||| |||||||||||    
T  7746550 ctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagcaaacacaattcaacccc 7746613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 4 - 161
Target Start/End: Original strand, 22000786 - 22000944
Alignment:
Q  4 aacctgtataattgctttgtatctttcttctttctctctct--gttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgc 101  Q
    |||||||||||||||||||| ||||||||| ||||||||||  |||||||| ||||| ||| ||| ||| | |||| |||  || || || |||||||||    
T  22000786 aacctgtataattgctttgtgtctttcttccttctctctctttgttttatctgctgcaatt-agtcctgaacatcatttcagaagcataactctatttgc 22000884  T
Q  102 ttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||||| || ||||||||    
T  22000885 ttctgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaactcaacccc 22000944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 9399372 - 9399529
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttg 100  Q
    |||||| |||||||||| ||||| ||| |||||||||||||| ||||||||||||||| ||| ||| ||| | ||||||||  ||| | |||||||| ||    
T  9399372 aggaacttgtataattgttttgtgtctctcttctttctctctttgttttatccgctgcaatt-agtcctg-acatcacttcagaaatagaattctatctg 9399469  T
Q  101 cttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaaccc 160  Q
    ||||| || |||||||||| |||||||||||| ||||||||| |||||| ||||||||||    
T  9399470 cttctgattagtgttttcagcttaggagaaaatgaagaaaaaactaacacaattcaaccc 9399529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 36 - 161
Target Start/End: Complemental strand, 31487552 - 31487428
Alignment:
Q  36 tctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttaggagaaaacga 135  Q
    ||||||||||||||||||||||| || |||| ||| | |||||||| |||  | || ||||||||||||| ||||||||||||| |||||||||||||||    
T  31487552 tctctctctgttttatccgctgc-atctagtcctgaacatcacttcaaaattagaactctatttgcttctgatcagtgttttcagcttaggagaaaacga 31487454  T
Q  136 agaaaaagctaacataattcaacccc 161  Q
    ||||||| | |||| |||||||||||    
T  31487453 agaaaaaaccaacacaattcaacccc 31487428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 37395547 - 37395387
Alignment:
Q  1 aggaacctgtataa-ttgctttgtatctttcttctttctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctattt 99  Q
    |||||||||||||| ||||| ||| | |||||||| | ||| ||||||||||||||||| | | ||||||| | ||||||||  ||| | |||||||| |    
T  37395547 aggaacctgtataaattgctatgtgtttttcttctctttctttctgttttatccgctgcaact-agttctgaacatcacttcagaaatagaattctatct 37395449  T
Q  100 gcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    |||||||||||||||||||| |||||||||| | ||||||||||  |||| |||||||||||    
T  37395448 gcttctaatcagtgttttcagcttaggagaagaagaagaaaaagtaaacacaattcaacccc 37395387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 44 - 159
Target Start/End: Original strand, 90234 - 90349
Alignment:
Q  44 tgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgtttt-caacttaggagaaaacgaagaaaaa 142  Q
    ||||||||||||||| |||||||  || | ||||||||| || || || ||||||||||||| ||||||||||| || ||||||||||||||||||||||    
T  90234 tgttttatccgctgc-atttagtcatgaacatcacttcggaagcagaactctatttgcttctgatcagtgtttttcagcttaggagaaaacgaagaaaaa 90332  T
Q  143 gctaacataattcaacc 159  Q
    ||||||| |||||||||    
T  90333 gctaacacaattcaacc 90349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 161
Target Start/End: Original strand, 19546279 - 19546447
Alignment:
Q  2 ggaacctgtataattgctttgtatctttcttctttctctctct----------gttttatccgctgctatttagttctggaaatcacttcgaaaacaaaa 91  Q
    |||||||||||||||||||||| |||||||||| |||||||||          |||||||||||||| ||||||| ||| | ||||||||  || || ||    
T  19546279 ggaacctgtataattgctttgtgtctttcttctctctctctctctctctctctgttttatccgctgc-atttagtcctgaacatcacttcagaagcataa 19546377  T
Q  92 ttctatttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
     | ||||||||||| |||||||| |||| |||||||| ||||||||||||| | |||| |||||||||||    
T  19546378 ctatatttgcttctgatcagtgtcttcagcttaggaggaaacgaagaaaaaaccaacacaattcaacccc 19546447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 13546277 - 13546443
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctc------tctgtttt-atccgctgctatttagttctggaaatcacttcgaaaacaaaatt 93  Q
    ||||||||||||||||| ||||| |||||||||||||||||      |||||||| ||||||||  | |||||| || | ||||||||  ||  | || |    
T  13546277 aggaacctgtataattgttttgtgtctttcttctttctctccctctctctgtttttatccgctgtaagttagttatgaacatcacttcagaagtagaact 13546376  T
Q  94 ctatttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaaccc 160  Q
    |||| ||||||| |||| |||||||| ||||| |||||||||||||||||  |||| ||||||||||    
T  13546377 ctatctgcttctgatcattgttttcagcttagaagaaaacgaagaaaaagtaaacacaattcaaccc 13546443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 31117260 - 31117095
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctctgt-----tttatccgctgctatttagttctggaaatcacttcgaaaacaaaattct 95  Q
    |||||||||||||| | |||||| |||||||||||||||||||| |     ||||||| |||| | ||||||||  | ||||||||  ||  | || |||    
T  31117260 aggaacctgtataactactttgtgtctttcttctttctctctctctctgtttttatccactgcaagttagttctaaacatcacttcagaagtagaactct 31117161  T
Q  96 atttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    || || || | ||||||||||||| |||||||||||||||||||||||  ||||  ||||||||||    
T  31117160 atctggttttgatcagtgttttcagcttaggagaaaacgaagaaaaagtaaacactattcaacccc 31117095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 36 - 161
Target Start/End: Complemental strand, 33932611 - 33932487
Alignment:
Q  36 tctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttaggagaaaacga 135  Q
    ||||||||||||||||||||||| | | ||||||| | |||| |||  ||  | || ||||||||||||| ||||||||||||| ||||| ||||||  |    
T  33932611 tctctctctgttttatccgctgcaact-agttctgaacatcatttcagaagtagaaatctatttgcttctgatcagtgttttcagcttagaagaaaaaaa 33932513  T
Q  136 agaaaaagctaacataattcaacccc 161  Q
    ||||||||| |||| |||||||||||    
T  33932512 agaaaaagccaacacaattcaacccc 33932487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 21100599 - 21100667
Alignment:
Q  93 tctatttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||||| ||||||| ||||||||||||| |||||||||||| ||||||||| |||||| |||||||||||    
T  21100599 tctatctgcttctgatcagtgttttcagcttaggagaaaatgaagaaaaaactaacacaattcaacccc 21100667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 11993271 - 11993109
Alignment:
Q  1 aggaacctgtataa-ttgctttgtatctttcttctttctctctctgt---tttatccgctgctatttagttctggaaatcacttcgaaaacaaaattcta 96  Q
    |||||||||||||| ||||||||| ||||||||| ||| |||||| |   |||||||| ||  ||| ||||||| | ||||||||  || || || ||||    
T  11993271 aggaacctgtataaattgctttgtgtctttcttccttccctctctttgtttttatccgttgaaatt-agttctgaacatcacttcagaagcagaactcta 11993173  T
Q  97 tttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    | |||| || ||||||||||| |  ||||||||||| ||||||||||| |||| |||||||||||    
T  11993172 tctgctcctgatcagtgtttttag-ttaggagaaaaagaagaaaaagcaaacacaattcaacccc 11993109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 161
Target Start/End: Original strand, 12353718 - 12353780
Alignment:
Q  99 tgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||||||| ||||| ||||||| ||||||||||| ||||||||||| ||||| |||||||||||    
T  12353718 tgcttctgatcagagttttcagcttaggagaaatcgaagaaaaagttaacacaattcaacccc 12353780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 93 - 159
Target Start/End: Original strand, 13736955 - 13737021
Alignment:
Q  93 tctatttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacc 159  Q
    ||||| || |||| |||||||||||||  ||||||||||| |||||||||||||||| |||||||||    
T  13736955 tctatctgtttctgatcagtgttttcagtttaggagaaaaagaagaaaaagctaacacaattcaacc 13737021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 26766591 - 26766637
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctctgtt 47  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||    
T  26766591 aggaacctgtataattgctttgtgtctttcttctttctctctttgtt 26766637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 643456 - 643588
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttg 100  Q
    |||||| |||||||||| ||||| ||||||||||  ||||||| |||||||||| |||  |||||| ||  | |||||||| |||  | || |  || |     
T  643456 aggaacttgtataattgttttgtgtctttcttct--ctctctccgttttatccgttgcattttagtcctaaacatcacttcaaaagtagaacttcatcta 643553  T
Q  101 cttctaatcagtgttttcaacttaggagaaaacga 135  Q
     |||||||||||||||||| |||||||||||||||    
T  643554 tttctaatcagtgttttcagcttaggagaaaacga 643588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 123 - 161
Target Start/End: Original strand, 21199890 - 21199928
Alignment:
Q  123 taggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  21199890 taggagaaaacgaagaaaaagctaacacaattcaacccc 21199928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 142
Target Start/End: Complemental strand, 33022003 - 33021898
Alignment:
Q  36 tctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttaggagaaaacga 135  Q
    ||||||||| ||||||||  ||| || |||||||| | ||||||||| ||  | || ||||| ||||||| ||||||||||||| |||||||||||| |     
T  33022003 tctctctctattttatccattgc-atctagttctgaacatcacttcggaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaaagg 33021905  T
Q  136 agaaaaa 142  Q
    |||||||    
T  33021904 agaaaaa 33021898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 124
Target Start/End: Complemental strand, 23880356 - 23880269
Alignment:
Q  36 tctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaactta 124  Q
    ||||||||||||||||||||||| ||||||| ||| | ||||||||  ||  | || ||||| ||||||| ||||||||||||| ||||    
T  23880356 tctctctctgttttatccgctgc-atttagtcctgaacatcacttcagaagtagaactctatctgcttctgatcagtgttttcagctta 23880269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 159
Target Start/End: Original strand, 25097920 - 25097956
Alignment:
Q  123 taggagaaaacgaagaaaaagctaacataattcaacc 159  Q
    |||||||||||||||||||||| ||||||||||||||    
T  25097920 taggagaaaacgaagaaaaagcaaacataattcaacc 25097956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 159
Target Start/End: Original strand, 25157012 - 25157048
Alignment:
Q  123 taggagaaaacgaagaaaaagctaacataattcaacc 159  Q
    |||||||||||||||||||||| ||||||||||||||    
T  25157012 taggagaaaacgaagaaaaagcaaacataattcaacc 25157048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 21100459 - 21100502
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctct 44  Q
    ||||||||||||||||| ||||| |||||||||| |||||||||    
T  21100459 aggaacctgtataattgttttgtgtctttcttctctctctctct 21100502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 25097582 - 25097625
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctct 44  Q
    ||||||||||||||||||||||| |||||| ||| |||||||||    
T  25097582 aggaacctgtataattgctttgtgtctttcctctctctctctct 25097625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 31487619 - 31487576
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctct 44  Q
    ||||||||||||||||| ||||| |||||||| |||||||||||    
T  31487619 aggaacctgtataattgttttgtgtctttcttttttctctctct 31487576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 132
Target Start/End: Complemental strand, 42242895 - 42242856
Alignment:
Q  93 tctatttgcttctaatcagtgttttcaacttaggagaaaa 132  Q
    ||||||||||||| ||||||||||||| ||||||||||||    
T  42242895 tctatttgcttctgatcagtgttttcagcttaggagaaaa 42242856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 21207533 - 21207575
Alignment:
Q  2 ggaacctgtataattgctttgtatctttcttctttctctctct 44  Q
    ||||||||||| |||||||||| |||||||||| |||||||||    
T  21207533 ggaacctgtatgattgctttgtgtctttcttctctctctctct 21207575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 25155552 - 25155594
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctc 43  Q
    ||||||||||||||||||||||| |||||| ||| ||||||||    
T  25155552 aggaacctgtataattgctttgtgtctttcctctctctctctc 25155594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 161
Target Start/End: Original strand, 31146482 - 31146520
Alignment:
Q  123 taggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    |||||||||| |||||||||||||||| |||||||||||    
T  31146482 taggagaaaaagaagaaaaagctaacacaattcaacccc 31146520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 35932762 - 35932921
Alignment:
Q  1 aggaacctgtataa-ttgctttgtatctttcttctttct--ctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctat 97  Q
    |||||||||||||| |||||| || |||||||||| |||  |||||||||||||||||||| ||||||||||| | ||| ||||  ||  | || |||||    
T  35932762 aggaacctgtataaattgctt-gtgtctttcttctctctttctctctgttttatccgctgc-atttagttctgaacatctcttcagaagtagaactctat 35932859  T
Q  98 ttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacc 159  Q
     ||||||| | | |  | ||  |  |||||||||| |||||||||||||||| |||||||||    
T  35932860 ctgcttctgaactgcttatttcagataggagaaaaagaagaaaaagctaacacaattcaacc 35932921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 69
Target Start/End: Complemental strand, 26783682 - 26783649
Alignment:
Q  36 tctctctctgttttatccgctgctatttagttct 69  Q
    ||||||||| ||||||||||||||||||||||||    
T  26783682 tctctctctattttatccgctgctatttagttct 26783649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 39799596 - 39799637
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctct 42  Q
    |||||| |||||||||||||||| |||||||||| |||||||    
T  39799596 aggaacatgtataattgctttgtgtctttcttctctctctct 39799637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 161
Target Start/End: Complemental strand, 20967270 - 20967238
Alignment:
Q  129 aaaacgaagaaaaagctaacataattcaacccc 161  Q
    |||| ||||||||||||||||||||||||||||    
T  20967270 aaaaagaagaaaaagctaacataattcaacccc 20967238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 104; Significance: 6e-52; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 15301600 - 15301438
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctct--gttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatt 98  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||  ||||||||||||||||||||||| ||||||||||||   || || || ||||||    
T  15301600 aggaacctgtataattgttttgtgtctttcttctttctctctctctgttttatccgctgctatttagttatggaaatcactttagaagcagaactctatt 15301501  T
Q  99 tgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  15301500 tgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaattcaacccc 15301438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 25593453 - 25593292
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctct--gttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatt 98  Q
    ||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||  || || || ||||||    
T  25593453 aggaacctgtataattgctttgtgtctttcttctttctctctctctgttttatccgctgctatttagttctggaaatcacttcataagcataactctatt 25593354  T
Q  99 tgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||  ||||| |||||||||||    
T  25593353 tgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaa-ataacacaattcaacccc 25593292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 13601551 - 13601387
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttcttt----ctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattcta 96  Q
    ||||||||||||||||||||||| ||||||||||||    |||||||||||||||| ||||||| ||||||||||||||||||||  || || || ||||    
T  13601551 aggaacctgtataattgctttgtgtctttcttctttttctctctctctgttttatctgctgctacttagttctggaaatcacttcagaagcagaactcta 13601452  T
Q  97 tttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||||||||| ||||||||||||| ||||||||||||| |||||||||||||||  ||||||||||    
T  13601451 tttgcttctgatcagtgttttcagcttaggagaaaactaagaaaaagctaacacgattcaacccc 13601387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 14732882 - 14733044
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctct--ctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatt 98  Q
    ||||||||||||||||||||||| ||||||||||||||| ||  |||||||||| |||||||||||||| |||||||||||||  || || || ||||||    
T  14732882 aggaacctgtataattgctttgtgtctttcttctttctcgctttctgttttatctgctgctatttagttttggaaatcacttcagaagcataactctatt 14732981  T
Q  99 tgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    || |||| ||||||||||| | ||||||||||||||||||||||||||||| |||||||||||    
T  14732982 tgtttctgatcagtgtttttagcttaggagaaaacgaagaaaaagctaacacaattcaacccc 14733044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 19623364 - 19623207
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttg 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||  |||||||||||||| ||| ||||||| | ||||||||  || ||  | ||||||||    
T  19623364 aggaacctgtataattgctttgtgtctttcttctttctctct--gttttatccgctgcaatt-agttctgaacatcacttcagaagcaggactctatttg 19623268  T
Q  101 cttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||||| ||||||||||| | |||||||||||||||||||||||| ||||||||||||||||    
T  19623267 cttctgatcagtgtttttagcttaggagaaaacgaagaaaaagccaacataattcaacccc 19623207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 16528695 - 16528535
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttg 100  Q
    ||||||||||||||||| ||||| ||||| |||| | |||||||||||||||| || | |||||||  || | ||||||||  ||| | || ||||| ||    
T  16528695 aggaacctgtataattgttttgtgtctttattctctttctctctgttttatccactccaatttagtcatgaacatcacttcagaaatagaactctatctg 16528596  T
Q  101 cttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  16528595 cttcttatcagtgttttcaacttaggagaaaacgaagaaaaagctaacacaattcaacccc 16528535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 4 - 161
Target Start/End: Original strand, 20113404 - 20113563
Alignment:
Q  4 aacctgtataattgctttgtatctttcttctttctctctct--gttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgc 101  Q
    |||||||||||||||||||| |||||||||| |||||||||  |||||||||||||| ||||||||||| | ||||||||  ||  | || ||||| |||    
T  20113404 aacctgtataattgctttgtgtctttcttctctctctctctcagttttatccgctgc-atttagttctgaacatcacttcagaagtagaactctatctgc 20113502  T
Q  102 ttctaatca-gtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    |||| |||| ||||||||| |||||||||||||||||||||||| |||| |||||||||||    
T  20113503 ttctgatcaagtgttttcagcttaggagaaaacgaagaaaaagcaaacacaattcaacccc 20113563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 13435270 - 13435105
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctctgt-----tttatccgctgctatttagttctggaaatcacttcgaaaacaaaattct 95  Q
    ||||||||| ||||||||||||| |||||||||||||| ||||| |     |||||||||||| | ||||| ||| | ||||||||  ||  | || |||    
T  13435270 aggaacctgcataattgctttgtgtctttcttctttctatctctctcagtttttatccgctgcaagttagtcctgaacatcacttcagaagtagaactct 13435171  T
Q  96 atttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    || ||||||| ||||||||||||| ||||||||||||| |||||||||| |||| |||||||||||    
T  13435170 atctgcttctgatcagtgttttcagcttaggagaaaacaaagaaaaagcaaacacaattcaacccc 13435105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 36 - 161
Target Start/End: Complemental strand, 21234500 - 21234376
Alignment:
Q  36 tctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttaggagaaaacga 135  Q
    ||||||||||||||||||||||| || |||||||| | ||||||||  ||  | |||||||| ||||||| ||||||||||||| |||||||||||| ||    
T  21234500 tctctctctgttttatccgctgc-atctagttctgaacatcacttcagaagtagaattctatctgcttctgatcagtgttttcagcttaggagaaaaaga 21234402  T
Q  136 agaaaaagctaacataattcaacccc 161  Q
     ||||||||||||| |||||||||||    
T  21234401 ggaaaaagctaacacaattcaacccc 21234376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 21624476 - 21624312
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctctgt-----tttatccgctgctatttagttctggaaatcacttcgaaaacaaaattct 95  Q
    |||||| |||||||||||||||| |||||||||||||||||||| |     || ||||||||| || || | ||| | ||||||||  ||  |||| |||    
T  21624476 aggaacttgtataattgctttgtgtctttcttctttctctctctctctattttaatccgctgc-atctattcctgaacatcacttcagaagtaaaactct 21624378  T
Q  96 atttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    || ||||||| ||||||||||||| |||||||||||| ||||||||||| |||| |||||||||||    
T  21624377 atctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagccaacacaattcaacccc 21624312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 36 - 155
Target Start/End: Original strand, 12716250 - 12716369
Alignment:
Q  36 tctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttaggagaaaacga 135  Q
    |||||||||||||||||||||| | |||||||||||||||||||||  || || || | |||||| |||| || |||||||||| |||||||||| ||||    
T  12716250 tctctctctgttttatccgctgatgtttagttctggaaatcacttcagaagcagaactatatttgtttcttattagtgttttcagcttaggagaagacga 12716349  T
Q  136 agaaaaagctaacataattc 155  Q
    ||||||| | |||| |||||    
T  12716350 agaaaaatcaaacacaattc 12716369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 16876289 - 16876129
Alignment:
Q  1 aggaacctgtataa-ttgctttgtatctttcttctttctctctctg-ttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatt 98  Q
    |||||||||||||| ||||||||| ||||||||| ||||||||||| ||||||||||||| ||||||||||| | ||||||||  || || || |||||     
T  16876289 aggaacctgtataaattgctttgtgtctttcttccttctctctctgtttttatccgctgc-atttagttctgaacatcacttcagaagcagaactctatc 16876191  T
Q  99 tgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    | || || |||||||||||| | ||| |||||||  |||||||| | ||||||||||||||||    
T  16876190 tactcctgatcagtgttttc-agttaagagaaaaataagaaaaaacaaacataattcaacccc 16876129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 36 - 160
Target Start/End: Complemental strand, 32543607 - 32543484
Alignment:
Q  36 tctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttaggagaaaacga 135  Q
    ||||||||||||||||||||||| || |||||||| | ||||||||  ||    || ||||| ||||||| |||||||||||||  ||||||||||| ||    
T  32543607 tctctctctgttttatccgctgc-atctagttctgaacatcacttcagaagtggaactctatctgcttctgatcagtgttttcaggttaggagaaaaaga 32543509  T
Q  136 agaaaaagctaacataattcaaccc 160  Q
    |||||||||||||| ||||||||||    
T  32543508 agaaaaagctaacacaattcaaccc 32543484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 36 - 161
Target Start/End: Original strand, 14101247 - 14101373
Alignment:
Q  36 tctctctctgtttt-atccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttaggagaaaacg 134  Q
    |||||||||||||| ||||||||| | || || ||| | ||||||||  ||  | || ||||| ||||||| |||||| |||||| ||||||||||||||    
T  14101247 tctctctctgtttttatccgctgcaagtttgtcctgaacatcacttcataagtagaactctatctgcttctgatcagtattttcagcttaggagaaaacg 14101346  T
Q  135 aagaaaaagctaacataattcaacccc 161  Q
    ||||||||||||||| |||||||||||    
T  14101347 aagaaaaagctaacacaattcaacccc 14101373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 93 - 163
Target Start/End: Original strand, 15532491 - 15532561
Alignment:
Q  93 tctatttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccctt 163  Q
    |||||||||| || ||||||||||||| |||||||||||| |||||||||||||||| |||||||||||||    
T  15532491 tctatttgctcctgatcagtgttttcagcttaggagaaaaagaagaaaaagctaacacaattcaacccctt 15532561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 36 - 161
Target Start/End: Complemental strand, 19085476 - 19085352
Alignment:
Q  36 tctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttaggagaaaacga 135  Q
    |||||||||||||||||  |||| |||| || |||   ||||||||  || || || ||||||||||||| ||||||||||||| |||| ||||||||||    
T  19085476 tctctctctgttttatctactgc-attttgtcctgaccatcacttcagaagcagaactctatttgcttcttatcagtgttttcagcttatgagaaaacga 19085378  T
Q  136 agaaaaagctaacataattcaacccc 161  Q
    ||||||||| |||| |||||||||||    
T  19085377 agaaaaagccaacacaattcaacccc 19085352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 93 - 161
Target Start/End: Complemental strand, 17380851 - 17380783
Alignment:
Q  93 tctatttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||||||||||||| ||||||||||||| |||||||||||| ||||||||||| |||| |||||||||||    
T  17380851 tctatttgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagccaacacaattcaacccc 17380783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 22801525 - 22801363
Alignment:
Q  1 aggaacctgtataa-ttgctttgtatctttcttctttct--ctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctat 97  Q
    ||||| |||||||| ||||||||| |||||||||| |||  |||||| ||||||||||||| || |||||||| | ||||||||  ||  | || |||||    
T  22801525 aggaatctgtataaattgctttgtgtctttcttctctctttctctctcttttatccgctgc-atctagttctgaacatcacttcagaagtagaactctat 22801427  T
Q  98 ttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
     ||||||| ||||||||| | | |||||| |||||  ||||||||||||||| |||||||||||    
T  22801426 ctgcttctgatcagtgttattagcttaggtgaaaaataagaaaaagctaacacaattcaacccc 22801363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 93 - 160
Target Start/End: Complemental strand, 10631425 - 10631358
Alignment:
Q  93 tctatttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaaccc 160  Q
    ||||| ||||||| ||||||||||||| |||||||||||| |||||||||||||||| ||||||||||    
T  10631425 tctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagctaacacaattcaaccc 10631358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 36 - 149
Target Start/End: Complemental strand, 24116162 - 24116049
Alignment:
Q  36 tctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgtttt-caacttaggagaaaacg 134  Q
    ||||||||||||||||||||||| |||||||  || | || |||||  || || || ||||||||||||| | ||||||||| |||||||||||||||||    
T  24116162 tctctctctgttttatccgctgc-atttagtcttgaacattacttcagaagcagaactctatttgcttctgaccagtgtttttcaacttaggagaaaacg 24116064  T
Q  135 aagaaaaagctaaca 149  Q
    |||||||||| ||||    
T  24116063 aagaaaaagccaaca 24116049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 156
Target Start/End: Original strand, 20731511 - 20731630
Alignment:
Q  36 tctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttaggagaaaacga 135  Q
    ||||||||||||||||||||||| || ||||| || | ||||||||  ||  | || ||||| ||||||| ||||||||||||| ||||| |||||| ||    
T  20731511 tctctctctgttttatccgctgc-atctagttttgaacatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttagtagaaaaaga 20731609  T
Q  136 agaaaaagctaacataattca 156  Q
    | |||||| ||||| ||||||    
T  20731610 ataaaaaggtaacacaattca 20731630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 93 - 159
Target Start/End: Complemental strand, 9717114 - 9717048
Alignment:
Q  93 tctatttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacc 159  Q
    ||||| ||||| | |||||||||||||||||||||||||| |||||||| || |||| |||||||||    
T  9717114 tctatctgcttttgatcagtgttttcaacttaggagaaaaagaagaaaatgcaaacacaattcaacc 9717048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 36 - 161
Target Start/End: Complemental strand, 16333073 - 16332950
Alignment:
Q  36 tctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttaggagaaaacga 135  Q
    ||||||||||||||||||||||  ||| ||||||| | ||||||||  ||  | || ||||| ||||||| ||| || ||||||  ||||||||||| ||    
T  16333073 tctctctctgttttatccgctggaatt-agttctgaacatcacttcagaagtagaactctatctgcttctgatctgtattttcag-ttaggagaaaaaga 16332976  T
Q  136 agaaaaagctaacataattcaacccc 161  Q
    ||||||||| |||| |||||||||||    
T  16332975 agaaaaagccaacacaattcaacccc 16332950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 25929863 - 25929807
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctctgttttatccgctgc 58  Q
    ||||||||||||||||||||||| |||||||||| ||||||| | |||||||||||||    
T  25929863 aggaacctgtataattgctttgtgtctttcttctctctctctgt-ttttatccgctgc 25929807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 161
Target Start/End: Complemental strand, 19625035 - 19624996
Alignment:
Q  122 ttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  19625035 ttaggtgaaaacgaagaaaaagctaacataattcaacccc 19624996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 23296171 - 23296128
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctct 44  Q
    ||||||||||||||||||||||| |||||||||| |||||||||    
T  23296171 aggaacctgtataattgctttgtgtctttcttctctctctctct 23296128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 25592007 - 25591964
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctct 44  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||    
T  25592007 aggaacctgtataattgctatgtgtctttcttctttctctctct 25591964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 15986738 - 15986582
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttg 100  Q
    ||||| ||||||||||||||||| |||||||    | ||||||| |||||| |||||| ||| ||| ||| | ||||||||  ||  | || ||||| ||    
T  15986738 aggaaactgtataattgctttgtgtctttctc---tatctctcttttttatacgctgcaatt-agtcctgaacatcacttcataagtagaactctatctg 15986643  T
Q  101 cttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
     |||| ||||||||||| | |||||| |||||||||||||||| ||| | ||||| |||||    
T  15986642 tttctgatcagtgtttttagcttaggtgaaaacgaagaaaaagttaatacaattcgacccc 15986582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 123 - 161
Target Start/End: Original strand, 17304155 - 17304193
Alignment:
Q  123 taggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  17304155 taggagaaaacgaagaaaaagctaacacaattcaacccc 17304193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 161
Target Start/End: Complemental strand, 19688015 - 19687954
Alignment:
Q  99 tgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||||||| ||||||||||||||| |||||||||| ||||||||| | |||| |||||||||||    
T  19688015 tgcttctgatcagtgttttcaacataggagaaaa-gaagaaaaaaccaacacaattcaacccc 19687954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 101 - 159
Target Start/End: Complemental strand, 29537901 - 29537843
Alignment:
Q  101 cttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacc 159  Q
    ||||| || |||||||||| |||||||| ||||||||||||| |||||| |||||||||    
T  29537901 cttctgattagtgttttcagcttaggagtaaacgaagaaaaaactaacacaattcaacc 29537843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 44
Target Start/End: Complemental strand, 26941814 - 26941777
Alignment:
Q  7 ctgtataattgctttgtatctttcttctttctctctct 44  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  26941814 ctgtataattgctttgtgtctttcttctttctctctct 26941777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 14101202 - 14101245
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctct 44  Q
    ||||||||||||||||| ||| | ||||||||||||||||||||    
T  14101202 aggaacctgtataattgatttatgtctttcttctttctctctct 14101245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 17927177 - 17927134
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctct 44  Q
    ||||||||||||||||| ||||| |||||||||| |||||||||    
T  17927177 aggaacctgtataattgatttgtttctttcttctctctctctct 17927134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 161
Target Start/End: Complemental strand, 18377761 - 18377647
Alignment:
Q  46 ttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagct 145  Q
    ||||||||||||| || |||||||| | ||||||||  ||  | || ||||| || || | |||||| |||||| |||| ||||||| |||||||||||     
T  18377761 ttttatccgctgc-atctagttctgaacatcacttcagaagtagaactctatctgtttttgatcagtattttcagcttatgagaaaaagaagaaaaagcc 18377663  T
Q  146 aacataattcaacccc 161  Q
    |||| |||||||||||    
T  18377662 aacacaattcaacccc 18377647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 161
Target Start/End: Complemental strand, 18434845 - 18434730
Alignment:
Q  46 ttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagct 145  Q
    ||||||||||||| |  |||||||| | ||||||||  ||  | || ||||| ||||||| || ||||||| || ||| |||||||| ||||||||||      
T  18434845 ttttatccgctgcaagctagttctgaacatcacttcagaagtagaactctatctgcttctgattagtgtttccagctttggagaaaatgaagaaaaagta 18434746  T
Q  146 aacataattcaacccc 161  Q
    |||| |||||||||||    
T  18434745 aacacaattcaacccc 18434730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 24717678 - 24717748
Alignment:
Q  93 tctatttgcttctaatcagtgttttcaacttaggagaaaa--cgaagaaaaagctaacataattcaacccc 161  Q
    ||||| ||||||| ||||||||||||| ||||||||||||   ||||||||||  |||| |||||||||||    
T  24717678 tctatctgcttctgatcagtgttttcagcttaggagaaaaattgaagaaaaagaaaacacaattcaacccc 24717748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 32335227 - 32335184
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctct 44  Q
    ||||||||||||||||||||||| ||||| |||||||| |||||    
T  32335227 aggaacctgtataattgctttgtgtcttttttctttctttctct 32335184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 3680498 - 3680464
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctt 35  Q
    ||||||||||||||||||||||| |||||||||||    
T  3680498 aggaacctgtataattgctttgtgtctttcttctt 3680464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 174
Target Start/End: Complemental strand, 21617541 - 21617461
Alignment:
Q  93 tctatttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccctttatgtattttt 174  Q
    ||||| ||||||| ||| |||||||||  ||||||||||| ||||||| ||| |||| ||||||||||| || ||| |||||    
T  21617541 tctatctgcttctgatctgtgttttcag-ttaggagaaaaagaagaaacagccaacacaattcaacccccttttgtgttttt 21617461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 17380962 - 17380918
Alignment:
Q  1 aggaacctgtataa-ttgctttgtatctttcttctttctctctct 44  Q
    |||||||||||||| ||||||||| |||||||||| |||||||||    
T  17380962 aggaacctgtataaattgctttgtgtctttcttctctctctctct 17380918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 44
Target Start/End: Complemental strand, 18434916 - 18434880
Alignment:
Q  8 tgtataattgctttgtatctttcttctttctctctct 44  Q
    |||||||||||||||| |||||||||| |||||||||    
T  18434916 tgtataattgctttgtgtctttcttctctctctctct 18434880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 44
Target Start/End: Complemental strand, 19085536 - 19085500
Alignment:
Q  8 tgtataattgctttgtatctttcttctttctctctct 44  Q
    |||||||||||||||| |||||||||| |||||||||    
T  19085536 tgtataattgctttgtgtctttcttctctctctctct 19085500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 19833850 - 19833917
Alignment:
Q  93 tctatttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||||| ||||||| |||||||||||||  ||||||||||| || |||||||  |||| |||||||||||    
T  19833850 tctatctgcttctgatcagtgttttcag-ttaggagaaaaagatgaaaaagaaaacacaattcaacccc 19833917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 102; Significance: 9e-51; HSPs: 67)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 8 - 158
Target Start/End: Complemental strand, 20645531 - 20645379
Alignment:
Q  8 tgtataattgctttgtatctttcttctttctctctct--gttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttct 105  Q
    |||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||||| | ||||||||  || ||||||||||||||||| |    
T  20645531 tgtataattgctttgtgtctttcttctttctctctctctgttttatccgctgctatttagttctgaacatcacttcagaagcaaaattctatttgctttt 20645432  T
Q  106 aatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaac 158  Q
     ||||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  20645431 gatcagtgttttcaacttagaagaaaacgaagaaaaagctaacacaattcaac 20645379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 13781361 - 13781521
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctct--gttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatt 98  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||  || |||||  |||||    
T  13781361 aggaacctgtataattgttttgtgtctttcttctttctctctctctgttttatccgctgctatttagttctggaaatcacttcataagcaaaa--ctatt 13781458  T
Q  99 tgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||||| | |||||||||| || ||||||||||||||||||||||||||||| |||||||||||    
T  13781459 tgcttttgatcagtgtttccagcttaggagaaaacgaagaaaaagctaacacaattcaacccc 13781521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 49643537 - 49643697
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctc--tctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatt 98  Q
    ||||| ||||||||||||||||| ||||||||| |||||  |||||||||||||||||| |||||||||||||||||||||||  || || || ||||||    
T  49643537 aggaatctgtataattgctttgtgtctttcttccttctctctctctgttttatccgctgttatttagttctggaaatcacttcataagcagaactctatt 49643636  T
Q  99 tgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacc 159  Q
    ||||| | ||||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  49643637 tgcttttgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaattcaacc 49643697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 13939280 - 13939118
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctct--gttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatt 98  Q
    |||||| |||||||||||||||| ||||||||||||||||||||  |||||||| |||||||||||||||||||||||| ||   || || || ||||||    
T  13939280 aggaacttgtataattgctttgtgtctttcttctttctctctctctgttttatctgctgctatttagttctggaaatcaatttagaagcagaaatctatt 13939181  T
Q  99 tgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||||||| || |||||||||| ||||||||||||| ||||||||||||||| |||||||||||    
T  13939180 tgcttctgattagtgttttcagcttaggagaaaacaaagaaaaagctaacacaattcaacccc 13939118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 15902580 - 15902417
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctc---tgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctat 97  Q
    ||||||||||||||||||||||| ||||||||||| | |||||   ||||||||| ||| ||||||||||||||||||||||||  || || || | |||    
T  15902580 aggaacctgtataattgctttgtgtctttcttcttgccctctcctctgttttatctgctactatttagttctggaaatcacttcagaagcagaactttat 15902481  T
Q  98 ttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    |||| ||| ||||||||||||| |||||||||||| |||||||||||||||| |||||||||||    
T  15902480 ttgcctctgatcagtgttttcagcttaggagaaaaagaagaaaaagctaacacaattcaacccc 15902417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 12963860 - 12964020
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctct--gttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatt 98  Q
    ||||||||||||||||||||||| |||||||||| |||||||||  |||||||||||| | ||||||| ||| | ||||||||| || || || ||||||    
T  12963860 aggaacctgtataattgctttgtgtctttcttctctctctctctctgttttatccgctac-atttagtcctgaatatcacttcgtaagcagaactctatt 12963958  T
Q  99 tgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaaccc 160  Q
    ||||||| ||||||||||||| || ||||||||| |||||||||||||||| ||||||||||    
T  12963959 tgcttcttatcagtgttttcagctgaggagaaaatgaagaaaaagctaacacaattcaaccc 12964020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 29952211 - 29952372
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctct--ctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatt 98  Q
    ||||||||||||||||||||||| |||||||| |||||||  |||||||||||||| ||| ||||||| ||| | ||||||||  ||  | || |||||     
T  29952211 aggaacctgtataattgctttgtgtctttcttttttctctttctctgttttatccgttgc-atttagtcctgaacatcacttcagaagtagaactctatc 29952309  T
Q  99 tgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  29952310 tgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaattcaacccc 29952372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 30001365 - 30001526
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctct--ctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatt 98  Q
    ||||||||||||||||||||||| |||||||| |||||||  |||||||||||||| ||| ||||||| ||| | ||||||||  ||  | || |||||     
T  30001365 aggaacctgtataattgctttgtgtctttcttttttctctttctctgttttatccgttgc-atttagtcctgaacatcacttcagaagtagaactctatc 30001463  T
Q  99 tgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  30001464 tgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaattcaacccc 30001526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 36 - 161
Target Start/End: Original strand, 19889750 - 19889874
Alignment:
Q  36 tctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttaggagaaaacga 135  Q
    |||||||||||||||| |||||| ||||||| ||||| ||||||||  || || || ||||||||||||||||||||||||||| |||||||||||||||    
T  19889750 tctctctctgttttattcgctgc-atttagtcctggacatcacttcagaagcagaactctatttgcttctaatcagtgttttcagcttaggagaaaacga 19889848  T
Q  136 agaaaaagctaacataattcaacccc 161  Q
    |||||||||||||| |||||||||||    
T  19889849 agaaaaagctaacaaaattcaacccc 19889874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 6090111 - 6089952
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctctgtttt-atccgctgctatttagttctggaaatcacttcgaaaacaaaattctattt 99  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||| | ||||| | | | ||||||||  ||  | || ||||| |    
T  6090111 aggaacctgtataatggctttgtgtctttcttctttctctctctgtttttatccgctgcaagttagtcccgaacatcacttcagaagtagaactctatct 6090012  T
Q  100 gcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacc 159  Q
    |||||| ||||||||||||| ||||||||||||||| ||||||||||||| |||||||||    
T  6090011 gcttctgatcagtgttttcagcttaggagaaaacgatgaaaaagctaacacaattcaacc 6089952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 17239697 - 17239864
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctct--------gttttatccgctgctatttagttctggaaatcacttcgaaaacaaaat 92  Q
    ||||||||||||||||||||||| |||||||||| |||||||||        |||||||||||||| ||||||| ||| | |||||||| ||| || ||     
T  17239697 aggaacctgtataattgctttgtgtctttcttctctctctctctctctctctgttttatccgctgc-atttagtcctgaacatcacttcaaaagcagaac 17239795  T
Q  93 tctatttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||||||||||| | |||| |||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  17239796 tctatttgcttttgatcattgttttcagcttaggagaaaacgaagaaaaagctaacacaattcaacccc 17239864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 36 - 161
Target Start/End: Complemental strand, 17667717 - 17667592
Alignment:
Q  36 tctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttaggagaaaacga 135  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||  || || || ||||||||||| | ||||||||||||| |||||||||||| ||    
T  17667717 tctctctctgttttatccgttgctatttagttctggaaattacttcagaagcagaactctatttgcttatgatcagtgttttcagcttaggagaaaatga 17667618  T
Q  136 agaaaaagctaacataattcaacccc 161  Q
    ||||||| |||||| |||||||||||    
T  17667617 agaaaaaactaacacaattcaacccc 17667592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 12727010 - 12727170
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctctgtttt-atccgctgctatttagttctggaa-atcacttcgaaaacaaaattctatt 98  Q
    |||||||| |||||||| ||||| ||||||||||||||||||||||||| ||||||||| |  || |||| ||| ||||||||  ||  | ||||||||     
T  12727010 aggaacctatataattgttttgtgtctttcttctttctctctctgtttttatccgctgcaagata-ttcttgaacatcacttcagaagtagaattctatc 12727108  T
Q  99 tgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaaccc 160  Q
    ||||||| ||||||||||||| |||||||||||||||| |||||||||||| ||||||||||    
T  12727109 tgcttctgatcagtgttttcagcttaggagaaaacgaaaaaaaagctaacacaattcaaccc 12727170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 41494383 - 41494225
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttg 100  Q
    ||||||||||||||||||||||| |||||||||  ||||||||||||| ||||||||| || |||| |||   ||||||||  ||| | || |||||||     
T  41494383 aggaacctgtataattgctttgtgtctttcttccatctctctctgtttaatccgctgc-atctagtcctgagcatcacttcagaaatagaactctattta 41494285  T
Q  101 cttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||||| ||||||||||||| |||||||||||| ||||||||||| |||| |||||||||||    
T  41494284 cttctgatcagtgttttcagcttaggagaaaa-gaagaaaaagccaacacaattcaacccc 41494225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 10 - 149
Target Start/End: Original strand, 22804806 - 22804944
Alignment:
Q  10 tataattgctttgtatctttcttctttctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatc 109  Q
    |||||||||||||| || | ||||||||||||||||||||||||||||| ||| ||  ||| | |||||||| |||  | || ||||| ||||||| |||    
T  22804806 tataattgctttgtgtcctccttctttctctctctgttttatccgctgcaatt-agacctgaacatcacttcaaaagtagaactctatctgcttctgatc 22804904  T
Q  110 agtgttttcaacttaggagaaaacgaagaaaaagctaaca 149  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  22804905 agtgttttcaacttaggagaaaacgaagaaaaaactaaca 22804944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 2560570 - 2560407
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctctgt---tttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctat 97  Q
    ||||||||||||||||||||||| |||||||||||||||||||| |   ||||||| |||| | ||||| ||| | |||||||| |||  | || |||||    
T  2560570 aggaacctgtataattgctttgtgtctttcttctttctctctctctgtttttatcctctgcaagttagtcctgaacatcacttcaaaagtagaactctat 2560471  T
Q  98 ttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
     ||||||| ||||||||||||  |||||||||| ||||||||||||  |||| |||||||||||    
T  2560470 ctgcttcttatcagtgttttcggcttaggagaagacgaagaaaaagtaaacacaattcaacccc 2560407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 13823451 - 13823292
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttg 100  Q
    |||||| ||||||||||||||||||||||||| | ||||||||||||||||||||||| || |||| ||| | ||||||||  ||  | || | ||| ||    
T  13823451 aggaacatgtataattgctttgtatctttcttttctctctctctgttttatccgctgc-atctagtcctgaagatcacttcagaattagaactttatctg 13823353  T
Q  101 cttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||||| ||||||||||||  |||||||||||| ||||||||| | |||| |||||||||||    
T  13823352 cttctgatcagtgttttcggcttaggagaaaaagaagaaaaatccaacacaattcaacccc 13823292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 36 - 157
Target Start/End: Original strand, 16659371 - 16659494
Alignment:
Q  36 tctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttaggagaaaacga 135  Q
    ||||||||||||| ||||||||||||||||||||| | ||||||    ||||| |||| ||||||||||| ||||||||||||| |||||||||||||||    
T  16659371 tctctctctgtttcatccgctgctatttagttctgaacatcactatagaaacagaattttatttgcttctgatcagtgttttcagcttaggagaaaacga 16659470  T
Q  136 ag--aaaaagctaacataattcaa 157  Q
    ||  |||||||||||| |||||||    
T  16659471 agaaaaaaagctaacaaaattcaa 16659494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 36 - 162
Target Start/End: Original strand, 8874935 - 8875061
Alignment:
Q  36 tctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttaggagaaaacga 135  Q
    |||||||||||||||||| |||| ||||||| ||| | ||||||||  || ||||| | ||||||||||| ||||||||||||| ||||||| |||||||    
T  8874935 tctctctctgttttatccactgccatttagtcctgaacatcacttcagaagcaaaactttatttgcttctgatcagtgttttcagcttaggaaaaaacga 8875034  T
Q  136 agaaaaagctaacataattcaacccct 162  Q
    ||||||| | |||| ||||||||||||    
T  8875035 agaaaaaaccaacacaattcaacccct 8875061  T

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Target: chr3; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 36 - 179
Target Start/End: Original strand, 14393806 - 14393951
Alignment:
Q  36 tctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttaggagaaaacga 135  Q
    ||||||||| ||||||||| ||| ||||||| ||| | ||||||||  ||  | || ||||||| ||||| |||||||||||||||||||||||||||||    
T  14393806 tctctctctattttatccgatgc-atttagtcctgaacatcacttcagaagtagaactctattttcttctgatcagtgttttcaacttaggagaaaacga 14393904  T
Q  136 agaaaaagctaacataattcaa---cccctttatgtatttttctcac 179  Q
    |||||||||||||| |||||||   ||||||  ||||||||||||||    
T  14393905 agaaaaagctaacacaattcaacgcccccttcttgtatttttctcac 14393951  T

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Target: chr3; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 162
Target Start/End: Complemental strand, 14968744 - 14968590
Alignment:
Q  5 acctgtataattgctttgtatctttcttctttctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttc 104  Q
    ||||||||||||||||||| || ||||||   |||||||| ||||||||||||| || |||| ||| | ||||||||  ||  | || ||||| ||||||    
T  14968744 acctgtataattgctttgtgtccttcttca--ctctctctattttatccgctgc-atctagtcctgaacatcacttcagaagtagaactctatctgcttc 14968648  T
Q  105 taatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccct 162  Q
    | ||||||||||||| |||||||||||| ||||||||||| |||| ||||||||||||    
T  14968647 tgatcagtgttttcagcttaggagaaaaagaagaaaaagccaacacaattcaacccct 14968590  T

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Target: chr3; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 36 - 179
Target Start/End: Original strand, 19885889 - 19886033
Alignment:
Q  36 tctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttaggagaaaacga 135  Q
    ||||||||||||||||||||||| ||||||| ||| | ||||||||  ||  | || ||||||||||||| || |||||||||| |||||||||||||||    
T  19885889 tctctctctgttttatccgctgc-atttagtcctgaacatcacttcagaagtagaactctatttgcttctgataagtgttttcagcttaggagaaaacga 19885987  T
Q  136 agaaaaagctaacataattcaa--cccctttatgtatttttctcac 179  Q
    |||||||| ||||| | |||||  ||||||| ||| ||||||||||    
T  19885988 agaaaaagataacacatttcaacccccctttttgtgtttttctcac 19886033  T

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Target: chr3; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 3238076 - 3237916
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttc-tttctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctattt 99  Q
    ||||||||||||||||||||||| || |||||| |||||||||||||||||||||||||    |||||||| | |||||| |  || ||  |||| | ||    
T  3238076 aggaacctgtataattgctttgtgtccttcttcttttctctctctgttttatccgctgcatactagttctgaacatcactccagaagcagtattccaatt 3237977  T
Q  100 gcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||||||||||||| ||||| | |||| |||||| | |||||||||||||| |||||||||||    
T  3237976 gcttctaatcagtcttttc-agttagaagaaaatgtagaaaaagctaacacaattcaacccc 3237916  T

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Target: chr3; HSP #24
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 3 - 160
Target Start/End: Original strand, 38178419 - 38178579
Alignment:
Q  3 gaacctgtataattgctttgtatctttcttctttctctctct----gttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatt 98  Q
    |||||||||||||| |||||| |||||||||| |||||||||    |||||||||||||| || |||| ||| | ||||||||  ||  | || |||||     
T  38178419 gaacctgtataattactttgtgtctttcttctctctctctctctctgttttatccgctgc-atatagtcctgaacatcacttcagaagaagaactctatc 38178517  T
Q  99 tgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaaccc 160  Q
    ||||||| || |||||||||| |||||||||||| ||||||||||| |||| ||||||||||    
T  38178518 tgcttctgattagtgttttcagcttaggagaaaaagaagaaaaagccaacacaattcaaccc 38178579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 46 - 161
Target Start/End: Complemental strand, 52919761 - 52919646
Alignment:
Q  46 ttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagct 145  Q
    ||||||||||||| | ||||||||| | |||||||| |||| | || ||||| ||||| | ||||||||||||| |||||||||||||||||||||| ||    
T  52919761 ttttatccgctgcaagttagttctgaacatcacttcaaaaatagaactctatctgcttgtgatcagtgttttcagcttaggagaaaacgaagaaaaaact 52919662  T
Q  146 aacataattcaacccc 161  Q
    |||| |||||| ||||    
T  52919661 aacacaattcagcccc 52919646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 8 - 161
Target Start/End: Original strand, 25399036 - 25399190
Alignment:
Q  8 tgtataattgctttgtatctttcttctttct--ctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttct 105  Q
    |||||||||| ||||| |||||||||| |||  |||||||||||||||||||| || |||| ||| | ||||||||  ||  | || ||||| |||||||    
T  25399036 tgtataattgttttgtgtctttcttctctctttctctctgttttatccgctgc-atctagtcctgaacatcacttcagaagtagaactctatctgcttct 25399134  T
Q  106 aatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
     || ||||||||| ||||||||||||  ||||||||||  ||||||||||||||||    
T  25399135 gattagtgttttcgacttaggagaaacagaagaaaaagtcaacataattcaacccc 25399190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 36 - 161
Target Start/End: Original strand, 1241886 - 1242010
Alignment:
Q  36 tctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttaggagaaaacga 135  Q
    ||||||||||||||||||||||| | | ||||||| | ||||||||  ||  | || ||||| ||||||| ||||||||||||| |||||||||||| ||    
T  1241886 tctctctctgttttatccgctgcaact-agttctgaacatcacttcagaagtagaaatctatctgcttctgatcagtgttttcagcttaggagaaaaaga 1241984  T
Q  136 agaaaaagctaacataattcaacccc 161  Q
    ||||||| | |||| |||||||||||    
T  1241985 agaaaaaaccaacacaattcaacccc 1242010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 36 - 161
Target Start/End: Original strand, 20628273 - 20628397
Alignment:
Q  36 tctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttaggagaaaacga 135  Q
    ||||||||| ||||||||| ||| || |||||||| | ||||||||  ||  | || ||||| ||||||| |||| |||||||| |||||||||||| ||    
T  20628273 tctctctctattttatccgttgc-atctagttctgaacatcacttcagaagtagaactctatctgcttctgatcactgttttcagcttaggagaaaaaga 20628371  T
Q  136 agaaaaagctaacataattcaacccc 161  Q
    |||||||||||||| |||||||||||    
T  20628372 agaaaaagctaacacaattcaacccc 20628397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 25 - 141
Target Start/End: Complemental strand, 50299595 - 50299480
Alignment:
Q  25 tctttcttctttctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaactta 124  Q
    |||||||||| ||||||||||||||||||||||| | | ||||||| | |||| |||  ||  | || ||||| ||||||| ||||||||||||||||||    
T  50299595 tctttcttctctctctctctgttttatccgctgcaact-agttctgaacatcagttcagaagtagaaatctatctgcttctgatcagtgttttcaactta 50299497  T
Q  125 ggagaaaacgaagaaaa 141  Q
    |||||||| ||||||||    
T  50299496 ggagaaaaagaagaaaa 50299480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 46350621 - 46350772
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttg 100  Q
    ||||||||||||||||| ||||| | ||||||||    || ||||||||||| ||||| || |||||||| | |||| ||| |||  | || ||||| ||    
T  46350621 aggaacctgtataattgatttgtgtatttcttct----ctttctgttttatctgctgc-atctagttctgcacatcatttcaaaagtagaactctatctg 46350715  T
Q  101 cttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaa 157  Q
    ||||| |||||| ||||||||||||||||||| ||||||||||  |||| |||||||    
T  46350716 cttctcatcagtattttcaacttaggagaaaaagaagaaaaagtcaacacaattcaa 46350772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 52283174 - 52283017
Alignment:
Q  1 aggaacctgtataa-ttgctttgtatctttcttctttctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctattt 99  Q
    |||||||||||||| ||||||||| ||||||||||  |||||||||||| ||||||||| |  ||||| || | ||||||||  ||  | || ||||| |    
T  52283174 aggaacctgtataaattgctttgtgtctttcttct--ctctctctgttt-atccgctgc-aggtagttatgaacatcacttcagaagtagaactctatct 52283079  T
Q  100 gcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    |||||| ||||||||||||| |||||||||||| ||| ||||||  |||| |||||||||||    
T  52283078 gcttctgatcagtgttttcagcttaggagaaaaagaataaaaagtcaacacaattcaacccc 52283017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 93 - 161
Target Start/End: Complemental strand, 14954700 - 14954632
Alignment:
Q  93 tctatttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||||| ||||||| ||||||||||||| |||||||||||| ||||||||||| |||| |||||||||||    
T  14954700 tctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagccaacacaattcaacccc 14954632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 45 - 161
Target Start/End: Complemental strand, 40799227 - 40799112
Alignment:
Q  45 gttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagc 144  Q
    |||||||||||||| || |||||||| | ||||||||  ||  | || ||||| ||||||| ||||||||||||| |||||||||||| ||||||||||     
T  40799227 gttttatccgctgc-atctagttctgaacatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaaga 40799129  T
Q  145 taacataattcaacccc 161  Q
     |||| |||||||||||    
T  40799128 aaacacaattcaacccc 40799112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 2025473 - 2025416
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctctgttttatccgctgc 58  Q
    |||||||||||||| |  ||||| ||||||||||||||||||||||||||||||||||    
T  2025473 aggaacctgtataaattgtttgtgtctttcttctttctctctctgttttatccgctgc 2025416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 31302733 - 31302571
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctctgt---tttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctat 97  Q
    |||||| |||||||||||||||| |||||||| | || |||||| |   |||||||||||| || |||||||| |  ||||||   ||  | || |||||    
T  31302733 aggaacatgtataattgctttgtgtctttcttatctcgctctctctatttttatccgctgc-atatagttctgaacgtcactttagaagtagaactctat 31302635  T
Q  98 ttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
     ||||||| ||||||||||||| | |||||||||| ||||||||| | |||| |||||||||||    
T  31302634 ctgcttctgatcagtgttttcagcataggagaaaaagaagaaaaaaccaacacaattcaacccc 31302571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 47406196 - 47406323
Alignment:
Q  1 aggaacctgtataa-ttgctttgtatctttcttctttctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctattt 99  Q
    |||||||||||||| ||||||||| ||||||||||    |||||||||||||||||||| || |||||||| | ||||||||  ||  |  | ||||| |    
T  47406196 aggaacctgtataaattgctttgtgtctttcttct----ctctctgttttatccgctgc-atctagttctgaacatcacttcacaagtagcactctatct 47406290  T
Q  100 gcttctaatcagtgttttcaacttaggagaaaa 132  Q
     ||||| ||||||||||||| ||||||||||||    
T  47406291 ccttctgatcagtgttttcagcttaggagaaaa 47406323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 49554377 - 49554445
Alignment:
Q  93 tctatttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||||| ||||||| |||| |||||||| |||||||||||| ||||||||| | |||| |||||||||||    
T  49554377 tctatctgcttctgatcaatgttttcagcttaggagaaaaagaagaaaaaaccaacacaattcaacccc 49554445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 179
Target Start/End: Complemental strand, 11189275 - 11189196
Alignment:
Q  101 cttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaac-ccctttatgtatttttctcac 179  Q
    ||||| ||||||||||||| |||||||||||| ||||||||| | |||| |||||||| |||||  ||| ||||||||||    
T  11189275 cttctgatcagtgttttcatcttaggagaaaaagaagaaaaaaccaacacaattcaacacccttcttgtgtttttctcac 11189196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 161
Target Start/End: Complemental strand, 28581364 - 28581317
Alignment:
Q  114 ttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    |||||| |||||||||||| |||||||||||||||| |||||||||||    
T  28581364 ttttcagcttaggagaaaaagaagaaaaagctaacacaattcaacccc 28581317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 93 - 159
Target Start/End: Complemental strand, 29854700 - 29854635
Alignment:
Q  93 tctatttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacc 159  Q
    ||||| ||||||| ||| |||||||||  ||||||||||| |||||||||||||||| |||||||||    
T  29854700 tctatctgcttctgatc-gtgttttcagtttaggagaaaaagaagaaaaagctaacacaattcaacc 29854635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 161
Target Start/End: Complemental strand, 2782832 - 2782706
Alignment:
Q  36 tctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttaggagaaa--ac 133  Q
    |||||||||||||||| |||||| | | ||||||| | ||||||||  ||  | |||||||| || |||| ||||||||||||| || ||||||||  |     
T  2782832 tctctctctgttttattcgctgcaact-agttctgaacatcacttcagaagtagaattctatctgattctgatcagtgttttcagctaaggagaaaagaa 2782734  T
Q  134 gaagaaaaagctaacataattcaacccc 161  Q
    ||||||||| | |||| |||||||||||    
T  2782733 gaagaaaaaaccaacacaattcaacccc 2782706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 18122515 - 18122583
Alignment:
Q  93 tctatttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||||| |||| || ||||||||||||| | |||||||||| | ||||||| |||||| |||||||||||    
T  18122515 tctatctgctcctgatcagtgttttcagcgtaggagaaaaaggagaaaaaactaacacaattcaacccc 18122583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 6252805 - 6252762
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctct 44  Q
    ||||||||||||||||| ||||| |||||||||| |||||||||    
T  6252805 aggaacctgtataattgatttgtgtctttcttctctctctctct 6252762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 17667790 - 17667747
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctct 44  Q
    ||||||||||||||||||||||| |||||| ||| |||||||||    
T  17667790 aggaacctgtataattgctttgtttctttcctctctctctctct 17667747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 18122387 - 18122430
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctct 44  Q
    |||||||| |||||||||||||| |||||||||| |||||||||    
T  18122387 aggaacctttataattgctttgtgtctttcttctctctctctct 18122430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 162
Target Start/End: Original strand, 19250285 - 19250324
Alignment:
Q  123 taggagaaaacgaagaaaaagctaacataattcaacccct 162  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  19250285 taggagaaaacgaagtaaaagctaacacaattcaacccct 19250324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 161
Target Start/End: Original strand, 22465376 - 22465415
Alignment:
Q  122 ttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||||||||||| |||||||||||||||| |||||||||||    
T  22465376 ttaggagaaaaggaagaaaaagctaacacaattcaacccc 22465415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 26418451 - 26418494
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctct 44  Q
    ||||||||||||||||||||||| |||||||| | |||||||||    
T  26418451 aggaacctgtataattgctttgtgtctttcttttctctctctct 26418494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 28581490 - 28581447
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctct 44  Q
    ||||||||||||||||||||||| |||||| ||| |||||||||    
T  28581490 aggaacctgtataattgctttgtgtctttcctctctctctctct 28581447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 158
Target Start/End: Complemental strand, 12967574 - 12967540
Alignment:
Q  124 aggagaaaacgaagaaaaagctaacataattcaac 158  Q
    |||||||||||||||||||||||||| ||||||||    
T  12967574 aggagaaaacgaagaaaaagctaacacaattcaac 12967540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 143
Target Start/End: Complemental strand, 16031793 - 16031743
Alignment:
Q  93 tctatttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaag 143  Q
    ||||||||||||| ||||||  ||||| |||||||||||| ||||||||||    
T  16031793 tctatttgcttctgatcagtaatttcagcttaggagaaaaagaagaaaaag 16031743  T

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Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 161
Target Start/End: Original strand, 16199943 - 16199981
Alignment:
Q  123 taggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    |||||||||||||||||||||| |||| |||||||||||    
T  16199943 taggagaaaacgaagaaaaagccaacacaattcaacccc 16199981  T

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Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 22770631 - 22770673
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctc 43  Q
    ||||||||||||||||| ||||  |||||||||||||||||||    
T  22770631 aggaacctgtataattgttttgcgtctttcttctttctctctc 22770673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 161
Target Start/End: Original strand, 26418618 - 26418656
Alignment:
Q  123 taggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    |||||||||||||||||||||| |||| |||||||||||    
T  26418618 taggagaaaacgaagaaaaagcaaacacaattcaacccc 26418656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 132
Target Start/End: Complemental strand, 47207003 - 47206914
Alignment:
Q  42 tctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttaggagaaaa 132  Q
    ||||||||||||||||| || |||||||  | ||||||||  ||  | || ||||| ||||||| ||||||||||||| ||||||||||||    
T  47207003 tctgttttatccgctgc-atctagttctaaacatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaa 47206914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 49669263 - 49669418
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttg 100  Q
    ||||| |||||||| |  ||||| |||||||||| |||||||||||||||||| |||| | |||| |||| | ||| ||||  ||  | || ||||| ||    
T  49669263 aggaatctgtataaattgtttgtgtctttcttctctctctctctgttttatccactgc-aattag-tctgaatatctcttcagaagtagaactctatctg 49669360  T
Q  101 cttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacc 159  Q
    ||||| ||| ||  |||||| ||||||||||| ||||||||| | |||| |||||||||    
T  49669361 cttctgatctgtactttcaa-ttaggagaaaaagaagaaaaaacgaacacaattcaacc 49669418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 158
Target Start/End: Complemental strand, 2783222 - 2783099
Alignment:
Q  36 tctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttaggagaaa--ac 133  Q
    |||||||||||||||| |||||| | | ||||||| | ||||||||  ||  | |||||||| || |||| ||||||||||||| || ||||||||  |     
T  2783222 tctctctctgttttattcgctgcaact-agttctgaacatcacttcagaagtagaattctatctgattctgatcagtgttttcagctaaggagaaaagaa 2783124  T
Q  134 gaagaaaaagctaacataattcaac 158  Q
    ||||||||| | |||| ||||||||    
T  2783123 gaagaaaaaaccaacacaattcaac 2783099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 161
Target Start/End: Complemental strand, 11222086 - 11222015
Alignment:
Q  93 tctatttgcttctaatcagtgttttcaacttagg---agaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||||| ||||||| ||||||||||||| ||||||   |||| | ||||||||||| |||| |||||||||||    
T  11222086 tctatctgcttctgatcagtgttttcagcttaggagaagaagatgaagaaaaagccaacacaattcaacccc 11222015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 161
Target Start/End: Complemental strand, 11222838 - 11222767
Alignment:
Q  93 tctatttgcttctaatcagtgttttcaacttagg---agaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||||| ||||||| ||||||||||||| ||||||   |||| | ||||||||||| |||| |||||||||||    
T  11222838 tctatctgcttctgatcagtgttttcagcttaggagaagaagatgaagaaaaagccaacacaattcaacccc 11222767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 44
Target Start/End: Original strand, 14393749 - 14393786
Alignment:
Q  7 ctgtataattgctttgtatctttcttctttctctctct 44  Q
    ||||||||||||||||| |||||||||| |||||||||    
T  14393749 ctgtataattgctttgtttctttcttctctctctctct 14393786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 19885832 - 19885873
Alignment:
Q  3 gaacctgtataattgctttgtatctttcttctttctctctct 44  Q
    ||||||||||||||| ||||| |||||||||| |||||||||    
T  19885832 gaacctgtataattgttttgtgtctttcttctctctctctct 19885873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 22128462 - 22128408
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctctgttttatccgctg 57  Q
    ||||||||||||||||| ||| | |||||||||  ||||||| ||||||||||||||    
T  22128462 aggaacctgtataattgttttatgtctttcttc--tctctctgtgttttatccgctg 22128408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 44
Target Start/End: Complemental strand, 6174713 - 6174677
Alignment:
Q  8 tgtataattgctttgtatctttcttctttctctctct 44  Q
    |||||||||||||||| |||||||||| |||||||||    
T  6174713 tgtataattgctttgtgtctttcttctctctctctct 6174677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 19250129 - 19250169
Alignment:
Q  4 aacctgtataattgctttgtatctttcttctttctctctct 44  Q
    |||||||||||||| ||||| |||||||||| |||||||||    
T  19250129 aacctgtataattgttttgtgtctttcttctctctctctct 19250169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 21639149 - 21639216
Alignment:
Q  93 tctatttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||||| ||||||| ||| || ||||||  ||||||||||| ||||||||||| |||| |||||||||||    
T  21639149 tctatctgcttctgatctgtattttcag-ttaggagaaaaagaagaaaaagccaacacaattcaacccc 21639216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 46797170 - 46797229
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctc--tctctgttttatccgctgc 58  Q
    |||||||||||||| |  ||||| |||||||||| ||||  |||||||||||||||||||    
T  46797170 aggaacctgtataaattgtttgtgtctttcttctctctctatctctgttttatccgctgc 46797229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 52919846 - 52919806
Alignment:
Q  4 aacctgtataattgctttgtatctttcttctttctctctct 44  Q
    |||||||||||||||||| | |||||||| |||||||||||    
T  52919846 aacctgtataattgctttttgtctttcttttttctctctct 52919806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 101; Significance: 3e-50; HSPs: 2)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 31971 - 31811
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttg 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||   || || || | ||||||    
T  31971 aggaacctgtataattgctttgtgtctttcttctttctctctctgttttatccgcttctatttagttctggaaatcaatttagaagcagaactttatttg 31872  T
Q  101 cttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||||| ||||||||||  | ||||||||||||||||||||||||||||| |||||||||||    
T  31871 cttctgatcagtgtttcaagcttaggagaaaacgaagaaaaagctaacacaattcaacccc 31811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 56 - 161
Target Start/End: Complemental strand, 48643 - 48538
Alignment:
Q  56 tgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattc 155  Q
    |||||||||||||||||||||||||| ||| ||||| |||||| |||||| |||||||||| || |||||||||||| |||||||||||||||| |||||    
T  48643 tgctatttagttctggaaatcacttcaaaagcaaaactctattcgcttctgatcagtgtttccagcttaggagaaaatgaagaaaaagctaacacaattc 48544  T
Q  156 aacccc 161  Q
    ||||||    
T  48543 aacccc 48538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 99; Significance: 5e-49; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 19665744 - 19665587
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttg 100  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  ||  | || ||||||||    
T  19665744 aggaacctgtataattgctttgtgtctttcttctttgtctctctgttttatccgctgctatttagttctggaaatcacttcagaagaagaactctatttg 19665645  T
Q  101 cttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacc 159  Q
    ||||| |||||| |||||| |||||||||||||||||||||| |||||| ||| |||||    
T  19665644 cttctgatcagt-ttttcagcttaggagaaaacgaagaaaaatctaacacaatccaacc 19665587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 37986344 - 37986505
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttg 100  Q
    ||||||||||||||||| ||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||| |||||  ||  | || ||||||||    
T  37986344 aggaacctgtataattgttttgtgtctttcttatttctctctctgttttatccactgctatttagttctggaaattacttcagaataagaactctatttg 37986443  T
Q  101 cttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccct 162  Q
    ||| | |||||||||||||  ||||||||||||||||||||| |||||| ||||||||||||    
T  37986444 cttatgatcagtgttttcagtttaggagaaaacgaagaaaaaactaacacaattcaacccct 37986505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 29681248 - 29681407
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttg 100  Q
    ||||||||||||||||| ||||| |  |||||||||||||||||||||||||||||||||||||| | |||||||||||||  || ||  | ||||||||    
T  29681248 aggaacctgtataattgttttgtgttgttcttctttctctctctgttttatccgctgctatttagctatggaaatcacttcagaagcagtactctatttg 29681347  T
Q  101 cttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaaccc 160  Q
    ||| | ||||||||||||| |||||||||||||||||||||||||||||  |||||||||    
T  29681348 cttatgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacactattcaaccc 29681407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 23120916 - 23120756
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttg 100  Q
    |||||| |||||||||| ||||| ||||||||||||||||||||||||||| | |||||| ||||||||||||||||||||  || || || ||||||||    
T  23120916 aggaacatgtataattgttttgtgtctttcttctttctctctctgttttatacactgctacttagttctggaaatcacttcagaagcagaactctatttg 23120817  T
Q  101 cttctaatcagt-gttttcaacttaggagaaaacgaagaaaaagctaacataattcaaccc 160  Q
    ||||| || |||  |||||| |||||||||||| |||||||||||||||| ||||||||||    
T  23120816 cttctgattagtctttttcagcttaggagaaaatgaagaaaaagctaacacaattcaaccc 23120756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 23749903 - 23749748
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttg 100  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| ||| | ||||||||  ||  | || ||||| |     
T  23749903 aggaatctgtataattgctttgtgtctttcttctttctctctctgttttatccgctgc-atttagtcctgaacatcacttcagaagtagaactctatcta 23749805  T
Q  101 cttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaa 157  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  23749804 cttctgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaattcaa 23749748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 36470294 - 36470135
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttg 100  Q
    ||||||||||||||||||||||| ||| ||| || |||||||||| |||||||| ||||| |||||||||||||||||||   || || || ||||||||    
T  36470294 aggaacctgtataattgctttgtgtctctct-ctctctctctctgatttatccgttgctacttagttctggaaatcactttagaagcagaactctatttg 36470196  T
Q  101 cttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
     ||||  ||||| |||||||||||||||||||||||||||||| ||||| |||||||||||    
T  36470195 tttctggtcagtattttcaacttaggagaaaacgaagaaaaagataacacaattcaacccc 36470135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 16631819 - 16631657
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctct--gttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatt 98  Q
    ||||||||||||||||||||| | |||||||| |||||||||||  |||||||||||||||  |||||||||||||||| ||   || ||||| ||||||    
T  16631819 aggaacctgtataattgctttctgtctttcttatttctctctctctgttttatccgctgctgcttagttctggaaatcattttagaagcaaaactctatt 16631720  T
Q  99 tgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||||| | ||||||||||||| |||||||||||| ||||||||| | |||| |||||||||||    
T  16631719 tgcttttgatcagtgttttcagcttaggagaaaaggaagaaaaaaccaacacaattcaacccc 16631657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 36 - 157
Target Start/End: Complemental strand, 12600098 - 12599977
Alignment:
Q  36 tctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttaggagaaaacga 135  Q
    |||||||||||||||||||||||||||||||||| |||||||||||  ||  | || | ||||||||||| ||||||||||||| |||||||||||||||    
T  12600098 tctctctctgttttatccgctgctatttagttctagaaatcacttcagaagtagaactttatttgcttctgatcagtgttttcagcttaggagaaaacga 12599999  T
Q  136 agaaaaagctaacataattcaa 157  Q
    |||||||||||||| |||||||    
T  12599998 agaaaaagctaacacaattcaa 12599977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 14605637 - 14605793
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctctgttttatccgctgctatttagttctggaaatcacttc-gaaaacaaaattctattt 99  Q
    |||||| |||||||||||||||| |||||||||||||||||| | ||||||||||||| | ||| | ||| | |||||||| ||||  | |||| ||| |    
T  14605637 aggaacttgtataattgctttgtgtctttcttctttctctctgt-ttttatccgctgcaagttattcctgaacatcacttcagaaagtagaattatatct 14605735  T
Q  100 gcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaa 157  Q
    |||||| ||||||||||||| |||||||||||||||| |||||||||||| |||||||    
T  14605736 gcttctgatcagtgttttcagcttaggagaaaacgaataaaaagctaacacaattcaa 14605793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 36 - 161
Target Start/End: Original strand, 19611138 - 19611263
Alignment:
Q  36 tctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttaggagaaaacga 135  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||  || || || ||||| ||||||| ||| |||||| ||  ||||||||||||||    
T  19611138 tctctctgtgttttatccgctgctatttagttctggaaatcacttcagaagcagaactctatgtgcttctgatctgtgtttacagtttaggagaaaacga 19611237  T
Q  136 agaaaaagctaacataattcaacccc 161  Q
    ||||||| |||||| |||||||||||    
T  19611238 agaaaaaactaacacaattcaacccc 19611263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 3395029 - 3394889
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctctgt---tttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctat 97  Q
    ||||||||||||||||| ||||| ||||||||| |||||||||| |   |||||||||||| || |||||||| |||| |||||  || || ||||||||    
T  3395029 aggaacctgtataattgttttgtgtctttcttccttctctctctctatttttatccgctgcaatctagttctgaaaattacttcagaagcataattctat 3394930  T
Q  98 ttgcttctaatcagtgttttcaacttaggagaaaacgaaga 138  Q
    |||||||| || |||||||| | ||||||||||||||||||    
T  3394929 ttgcttctgattagtgtttttagcttaggagaaaacgaaga 3394889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 55379689 - 55379534
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttg 100  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |||| |||||||  || | ||||||||  ||  | || | ||| ||    
T  55379689 aggaacctgtataattgttttgtgtctttcttctttctctctctgttttatccactgc-atttagtcttgaacatcacttcagaagtagaactttatctg 55379591  T
Q  101 cttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaa 157  Q
    ||||| ||||||||||||| |||||||||||| |||| |||| || ||| |||||||    
T  55379590 cttctgatcagtgttttcagcttaggagaaaatgaaggaaaaactcacacaattcaa 55379534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 40 - 161
Target Start/End: Original strand, 19621761 - 19621881
Alignment:
Q  40 tctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttaggagaaaacgaagaa 139  Q
    ||||||||||||||||||| ||||||||||| | |||||||   || || || | ||||||||| | ||| ||||||||| |||||||||||||||||||    
T  19621761 tctctgttttatccgctgc-atttagttctgaacatcactttagaagcagaactttatttgcttttgatccgtgttttcatcttaggagaaaacgaagaa 19621859  T
Q  140 aaagctaacataattcaacccc 161  Q
    |||||||||| |||||||||||    
T  19621860 aaagctaacacaattcaacccc 19621881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 44 - 161
Target Start/End: Complemental strand, 10072224 - 10072108
Alignment:
Q  44 tgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaag 143  Q
    ||||||||||||||| || |||||||| | ||||||||  ||   ||| |||| |||||||| ||||||||||||| |||||||||||| ||||||||||    
T  10072224 tgttttatccgctgc-atctagttctgaacatcacttcagaagtgaaactctagttgcttctgatcagtgttttcatcttaggagaaaaagaagaaaaag 10072126  T
Q  144 ctaacataattcaacccc 161  Q
    |||||| |||||||||||    
T  10072125 ctaacacaattcaacccc 10072108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 36 - 161
Target Start/End: Original strand, 22676327 - 22676451
Alignment:
Q  36 tctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttaggagaaaacga 135  Q
    ||||||||||||||||||||||| || |||| ||| | |||||||| |||  | || ||||| ||||||| ||||||||||||| |||||||||||| ||    
T  22676327 tctctctctgttttatccgctgc-atctagtcctgaacatcacttcaaaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaaaga 22676425  T
Q  136 agaaaaagctaacataattcaacccc 161  Q
    ||||||||| |||| |||||| ||||    
T  22676426 agaaaaagccaacacaattcaccccc 22676451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 29120745 - 29120586
Alignment:
Q  1 aggaacctgtataa-ttgctttgtatctttcttctttctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctattt 99  Q
    |||||||||||||| ||||||||| ||| |||||| ||||||| || || ||||||||| ||| ||||||| | ||||||||  ||  | || ||||| |    
T  29120745 aggaacctgtataaattgctttgtgtctctcttctctctctctatgctt-atccgctgcaatt-agttctgaacatcacttcagaagtagaactctatct 29120648  T
Q  100 gcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    |||||| ||||||||||||| |||||||||||| ||||| ||||| |||| |||||||||||    
T  29120647 gcttctgatcagtgttttcagcttaggagaaaaagaagagaaagccaacacaattcaacccc 29120586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 93 - 158
Target Start/End: Original strand, 24628720 - 24628785
Alignment:
Q  93 tctatttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaac 158  Q
    ||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  24628720 tctatctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaattcaac 24628785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 93 - 161
Target Start/End: Complemental strand, 15135005 - 15134937
Alignment:
Q  93 tctatttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||| | |||||| |||||||||||    
T  15135005 tctatttgcttctgatcagtgttttcaacttaagagaaaacgaagaaataactaacacaattcaacccc 15134937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 93 - 161
Target Start/End: Complemental strand, 3792619 - 3792551
Alignment:
Q  93 tctatttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||||| ||||||||| ||||||||||| |||||||||||| ||||||||||| |||| |||||||||||    
T  3792619 tctatctgcttctaagcagtgttttcagcttaggagaaaaagaagaaaaagccaacacaattcaacccc 3792551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 37436264 - 37436402
Alignment:
Q  1 aggaacctgtataa-ttgctttgtatctttcttctttctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctattt 99  Q
    |||||||||||||| ||||||||| |||||||||| ||||| |   |||||| ||||||| | |||||||| | ||||||||  ||  | || ||||| |    
T  37436264 aggaacctgtataaattgctttgtgtctttcttctctctctgt---ttttattcgctgct-tctagttctgaacatcacttcataagtagaactctatct 37436359  T
Q  100 gcttctaatcagtgttttcaacttaggagaaaacgaagaaaaa 142  Q
    |||||| ||||||||||||||| |||||||||| |||||||||    
T  37436360 gcttctgatcagtgttttcaacataggagaaaaagaagaaaaa 37436402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 8686175 - 8686331
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctctgttttatccgctgctatttagt-tctggaaatcacttcgaaaacaaaattctattt 99  Q
    |||||| |||||||||| ||||| ||||||||||  ||| |||||||||||||||||| ||||||  |||| | |||||||| ||| || || || || |    
T  8686175 aggaacttgtataattgttttgtgtctttcttct--ctcgctctgttttatccgctgc-atttagaatctgaacatcacttcaaaagcagaactcaatct 8686271  T
Q  100 gcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    |||||| |||||||  ||||   || ||||||||||||||||||| |||| |||||||||||    
T  8686272 gcttctgatcagtgacttcag--taagagaaaacgaagaaaaagcaaacacaattcaacccc 8686331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 36 - 158
Target Start/End: Complemental strand, 10071846 - 10071725
Alignment:
Q  36 tctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttaggagaaaacga 135  Q
    |||||||||||||||||  |||| || |||||||| | ||||||||  ||    || ||||||||||||| ||||||||||||| ||||||| |||| ||    
T  10071846 tctctctctgttttatctactgc-atctagttctgaacatcacttcagaagtggaactctatttgcttcttatcagtgttttcagcttaggaaaaaaaga 10071748  T
Q  136 agaaaaagctaacataattcaac 158  Q
    |||||||| ||||| ||||||||    
T  10071747 agaaaaagataacacaattcaac 10071725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 36 - 142
Target Start/End: Complemental strand, 17246952 - 17246847
Alignment:
Q  36 tctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttaggagaaaacga 135  Q
    |||||||||||||||||||| || || |||||||| | ||||||||  ||  | || ||||| ||||||| ||||||||||||| |||||||||||| ||    
T  17246952 tctctctctgttttatccgccgc-atctagttctgaacatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaaaga 17246854  T
Q  136 agaaaaa 142  Q
    |||||||    
T  17246853 agaaaaa 17246847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 36 - 161
Target Start/End: Complemental strand, 54679203 - 54679079
Alignment:
Q  36 tctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttaggagaaaacga 135  Q
    ||||||||||||||||||||||| || | ||| || | ||||||||  ||  | || ||||| ||||| | ||||||||||||| |||||||||||| ||    
T  54679203 tctctctctgttttatccgctgc-atcttgttttgaacatcacttcagaagtagaactctatctgcttttgatcagtgttttcagcttaggagaaaaaga 54679105  T
Q  136 agaaaaagctaacataattcaacccc 161  Q
    ||||||||  |||| |||||||||||    
T  54679104 agaaaaagaaaacacaattcaacccc 54679079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 93 - 161
Target Start/End: Complemental strand, 44397495 - 44397427
Alignment:
Q  93 tctatttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||||| ||||||| ||||||||||||| |||| ||||||| ||||||||||| |||| |||||||||||    
T  44397495 tctatctgcttctgatcagtgttttcagcttaagagaaaaagaagaaaaagccaacacaattcaacccc 44397427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 90 - 161
Target Start/End: Complemental strand, 19883982 - 19883911
Alignment:
Q  90 aattctatttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    |||||||| ||||||| || |||||||| | |||||||||||| ||||||||| |||||| |||||||||||    
T  19883982 aattctatctgcttctgattagtgtttttagcttaggagaaaaagaagaaaaaactaacacaattcaacccc 19883911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 3106150 - 3106321
Alignment:
Q  1 aggaacctgtataa-ttgctttgtatctttcttctttctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctattt 99  Q
    |||||||||||||| |||||| || ||||||||||  |||||||||||||||||||||| ||| |||| || | ||| ||||  ||  | || ||||| |    
T  3106150 aggaacctgtataaattgctt-gtgtctttcttct--ctctctctgttttatccgctgcaatt-agttatgaacatctcttcagaagtagaactctatct 3106245  T
Q  100 gcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccctttatgtatttttct 176  Q
    |||||| | | |  ||||||  ||||||||||| |||||||||||||||| |||||||||||||  ||| |||||||    
T  3106246 gcttctgaactgcattttcag-ttaggagaaaaagaagaaaaagctaacacaattcaaccccttcttgtgtttttct 3106321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 177 - 221
Target Start/End: Complemental strand, 12599773 - 12599729
Alignment:
Q  177 cacgagtatgacaaccttggttgattcccttagtggatttacaag 221  Q
    ||||||||||||||||||  |||||||||||||||||||||||||    
T  12599773 cacgagtatgacaaccttatttgattcccttagtggatttacaag 12599729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 159
Target Start/End: Original strand, 13576915 - 13577037
Alignment:
Q  36 tctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtg-ttttcaacttaggagaaaacg 134  Q
    ||||||||||||||||||||||| || |||||||| | ||||||||  ||  | || ||||| ||||||| ||||||| |||||| |||||||||||| |    
T  13576915 tctctctctgttttatccgctgc-atctagttctgaacatcacttcagaagtagaactctatctgcttctgatcagtgtttttcagcttaggagaaaaag 13577013  T
Q  135 aagaaaaagctaacataattcaacc 159  Q
    ||  |||||| |||| |||||||||    
T  13577014 aa-taaaagcaaacacaattcaacc 13577037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 93 - 157
Target Start/End: Original strand, 14905148 - 14905212
Alignment:
Q  93 tctatttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaa 157  Q
    ||||| ||||||| |||| |||||||| |||||||||||| ||||||||||| |||| |||||||    
T  14905148 tctatctgcttctgatcaatgttttcagcttaggagaaaaagaagaaaaagccaacacaattcaa 14905212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 19884112 - 19884069
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctct 44  Q
    ||||||||||||||||||||||| |||||||||| |||||||||    
T  19884112 aggaacctgtataattgctttgtgtctttcttctctctctctct 19884069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 160
Target Start/End: Complemental strand, 56033814 - 56033747
Alignment:
Q  93 tctatttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaaccc 160  Q
    ||||| ||||||| || |||||||||| |||||||||||| ||||||||| | |||| ||||||||||    
T  56033814 tctatctgcttctgataagtgttttcagcttaggagaaaaagaagaaaaaaccaacacaattcaaccc 56033747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 17788772 - 17788806
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctt 35  Q
    |||||||||||||||||||||||||||||||||||    
T  17788772 aggaacctgtataattgctttgtatctttcttctt 17788806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 161
Target Start/End: Complemental strand, 6640945 - 6640910
Alignment:
Q  126 gagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    |||||||||||||||||||||||| |||||||||||    
T  6640945 gagaaaacgaagaaaaagctaacacaattcaacccc 6640910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 11900570 - 11900527
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctct 44  Q
    |||||||||||||||| |||||| |||||||||| |||||||||    
T  11900570 aggaacctgtataattactttgtgtctttcttctctctctctct 11900527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 14357738 - 14357695
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctct 44  Q
    ||||||||||||||||| ||||| |||||||||| |||||||||    
T  14357738 aggaacctgtataattgttttgtgtctttcttctctctctctct 14357695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 22676254 - 22676297
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctct 44  Q
    ||||||||||||||||||||||| |||||||| | |||||||||    
T  22676254 aggaacctgtataattgctttgtgtctttcttttctctctctct 22676297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 45832766 - 45832723
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctct 44  Q
    ||||||||||||||||||||||| |||||||||| | |||||||    
T  45832766 aggaacctgtataattgctttgtgtctttcttctctgtctctct 45832723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 15475879 - 15475951
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttc--tctctctgttttatccgctgctatttagttctgga 72  Q
    ||||||| ||||||||||||||| ||| |||||| ||  ||||||||||||||| ||||| || ||||||||||    
T  15475879 aggaaccagtataattgctttgtgtctctcttctctctttctctctgttttatctgctgc-atctagttctgga 15475951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 22089665 - 22089623
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctc 43  Q
    ||||||||||||||||||||||| |||||||||| ||| ||||    
T  22089665 aggaacctgtataattgctttgtgtctttcttctatctatctc 22089623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 161
Target Start/End: Complemental strand, 40859963 - 40859925
Alignment:
Q  123 taggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    |||||||||| |||||||||||||||| |||||||||||    
T  40859963 taggagaaaaagaagaaaaagctaacacaattcaacccc 40859925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 41115489 - 41115523
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctt 35  Q
    ||||||||||||||||||||||| |||||||||||    
T  41115489 aggaacctgtataattgctttgtgtctttcttctt 41115523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 157
Target Start/End: Complemental strand, 11914955 - 11914893
Alignment:
Q  93 tctatttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaa 157  Q
    ||||||||||||| | ||||| |||||   ||||||||||||||||||||| ||||| |||||||    
T  11914955 tctatttgcttctgaccagtgatttcag--taggagaaaacgaagaaaaagttaacacaattcaa 11914893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 13576847 - 13576891
Alignment:
Q  1 aggaacctgtataa-ttgctttgtatctttcttctttctctctct 44  Q
    |||||||||||||| ||||||||| |||||||||| |||||||||    
T  13576847 aggaacctgtataaattgctttgtgtctttcttctctctctctct 13576891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 16852883 - 16852839
Alignment:
Q  1 aggaacctgtataa-ttgctttgtatctttcttctttctctctct 44  Q
    |||||||||||||| ||||||||| ||||||||| ||||||||||    
T  16852883 aggaacctgtataaattgctttgtgtctttcttccttctctctct 16852839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 161
Target Start/End: Complemental strand, 18473321 - 18473289
Alignment:
Q  129 aaaacgaagaaaaagctaacataattcaacccc 161  Q
    |||| ||||||||||||||||||||||||||||    
T  18473321 aaaaagaagaaaaagctaacataattcaacccc 18473289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 93; Significance: 2e-45; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 10 - 163
Target Start/End: Original strand, 378283 - 378442
Alignment:
Q  10 tataattgctttgtatctttcttctttctc------tctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgctt 103  Q
    |||||||||||||| |||||||||||||||      ||||||||||||||||||||||||||||||||||||||||||  || || || |||||||||||    
T  378283 tataattgctttgtgtctttcttctttctctctctctctctgttttatccgctgctatttagttctggaaatcacttcagaagcagaactctatttgctt 378382  T
Q  104 ctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccctt 163  Q
    || || ||||||||||  |||||||||||||||||||||||||||| |||||||||||||    
T  378383 ctgattagtgttttcagattaggagaaaacgaagaaaaagctaacacaattcaacccctt 378442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 161
Target Start/End: Complemental strand, 219622 - 219461
Alignment:
Q  4 aacctgtataattgctttgtatctttcttctttctctctct-----gttttatccgctgctatttagttc-tggaaatcacttcgaaaacaaaattctat 97  Q
    |||||||||||||||||||| |||||||||| |||||||||      |||||||||||||  ||||| || || | ||||||||  ||    || |||||    
T  219622 aacctgtataattgctttgtgtctttcttctctctctctctctctgtttttatccgctgc-gtttagatcatgaatatcacttcagaagtggaactctat 219524  T
Q  98 ttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
     || |||| ||||||||||||| |||||||||||||||| |||||  ||||| |||||||||||    
T  219523 ctg-ttctgatcagtgttttcagcttaggagaaaacgaaaaaaaaagtaacacaattcaacccc 219461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 245006 - 245049
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctct 44  Q
    ||||||||||||||||||||||| |||||||||| |||||||||    
T  245006 aggaacctgtataattgctttgtgtctttcttctctctctctct 245049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530 (Bit Score: 92; Significance: 8e-45; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 2741 - 2903
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttct--ctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatt 98  Q
    |||||||| |||||||||||||| ||||||||||| ||  |||||||||||||||| ||||| |||||||| |||||||||||  || || || ||||||    
T  2741 aggaacctatataattgctttgtgtctttcttcttactttctctctgttttatccgttgctacttagttctagaaatcacttcagaagcagaactctatt 2840  T
Q  99 tgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||||||| || |||||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  2841 tgcttctgataagtgttttcagcttaggagaaaacgaagaaaaagctaacacaattcaacccc 2903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 92; Significance: 8e-45; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 12758510 - 12758678
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctc--------tctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaat 92  Q
    ||||||||||||||||||||||| |||||||||| ||||        ||||||||||||||||||||| |||||||||||||||||||   || |||||     
T  12758510 aggaacctgtataattgctttgtgtctttcttctctctctctctctctctctgttttatccgctgctacttagttctggaaatcactttagaagcaaaac 12758609  T
Q  93 tctatttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||||||||||||| |||||||||||||  |||||||||||||||||||||||||||| |||||||||||    
T  12758610 tctatttgcttctgatcagtgttttcagtttaggagaaaacgaagaaaaagctaacacaattcaacccc 12758678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 36 - 161
Target Start/End: Complemental strand, 19153364 - 19153239
Alignment:
Q  36 tctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttaggagaaaacga 135  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  || || || ||||||||||||| ||||||||||||| |||||||||||||||    
T  19153364 tctctctctgttttatccgctgctatttagttctggaaatcacttcagaagcataactctatttgcttctgatcagtgttttcagcttaggagaaaacga 19153265  T
Q  136 agaaaaagctaacataattcaacccc 161  Q
    |||| ||||||||| |||||||||||    
T  19153264 agaataagctaacacaattcaacccc 19153239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 3 - 147
Target Start/End: Original strand, 16682029 - 16682175
Alignment:
Q  3 gaacctgtataattgctttgtatctttcttctttctc--tctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttg 100  Q
    |||| |||||||||| ||||| |||||| ||||||||  ||||||||||||| ||||||||||||||||||||||||||||  || |  || | ||||||    
T  16682029 gaacttgtataattgttttgtgtctttcctctttctctctctctgttttatctgctgctatttagttctggaaatcacttcagaagccgaactatatttg 16682128  T
Q  101 cttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaa 147  Q
    ||||| |||| |||||||| |||||||||||||||||||||||||||    
T  16682129 cttctgatcattgttttcagcttaggagaaaacgaagaaaaagctaa 16682175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 20256286 - 20256408
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctc--tctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatt 98  Q
    |||||| |||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||||| |||||||||||||  || || || ||||||    
T  20256286 aggaacttgtataattgctttgtgtctttcttctttctctctctctgttttatccgctgctatttagttttggaaatcacttcagaagcagaactctatt 20256385  T
Q  99 tgcttctaatcagtgttttcaac 121  Q
    ||||||| |||||||||||||||    
T  20256386 tgcttctgatcagtgttttcaac 20256408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 43 - 161
Target Start/End: Complemental strand, 17007643 - 17007525
Alignment:
Q  43 ctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaa 142  Q
    |||||||||||||||||||||||||||||||||||||||  || || || | ||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  17007643 ctgttttatccgctgctatttagttctggaaatcacttcagaagcagaactatatttgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaa 17007544  T
Q  143 gctaacataattcaacccc 161  Q
     | |||| |||||||||||    
T  17007543 acaaacacaattcaacccc 17007525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 43 - 161
Target Start/End: Original strand, 17541307 - 17541425
Alignment:
Q  43 ctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaa 142  Q
    |||||||||||||||||||||||||||||||||||||||  || || || | ||||||||||| ||||||||||||| |||||||||||| |||||||||    
T  17541307 ctgttttatccgctgctatttagttctggaaatcacttcagaagcagaactatatttgcttctgatcagtgttttcagcttaggagaaaatgaagaaaaa 17541406  T
Q  143 gctaacataattcaacccc 161  Q
     |||||| |||||||||||    
T  17541407 actaacacaattcaacccc 17541425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 25163448 - 25163286
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctctgt---tttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctat 97  Q
    ||||||||||||||||||||||| || ||||||||||||||||| |   |||||||||||| ||| ||| | | | ||||||||  || || || ||| |    
T  25163448 aggaacctgtataattgctttgtgtcgttcttctttctctctctctgtttttatccgctgcaatt-agtccggaacatcacttcagaagcagaactctgt 25163350  T
Q  98 ttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  25163349 ttgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaattcaacccc 25163286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 19942613 - 19942451
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctctg---ttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctat 97  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    ||||||| ||||| | ||||| ||| | ||||||||  ||  | || |||||    
T  19942613 aggaacctgtataattgctttgtgtctttcttctttctctctctacgtttttatcggctgcaagttagtcctgaacatcacttcagaagtagaactctat 19942514  T
Q  98 ttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
     ||||| | ||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  19942513 ctgctt-tgatcggtgttttcagcttaggagaaaacgaagaaaaagccaacataattcaacccc 19942451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 29692689 - 29692564
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctct--gttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatt 98  Q
    |||||||| |||||||||||||| || |||||||||||||||||  |||||||  |||||||||||||| |||||||||||||  || || || ||||||    
T  29692689 aggaacctatataattgctttgtctccttcttctttctctctctcggttttatttgctgctatttagttatggaaatcacttcagaagcagaactctatt 29692590  T
Q  99 tgcttctaatcagtgttttcaactta 124  Q
    ||||||| ||||||||||||| ||||    
T  29692589 tgcttctgatcagtgttttcagctta 29692564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 36 - 162
Target Start/End: Original strand, 30422242 - 30422367
Alignment:
Q  36 tctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttaggagaaaacga 135  Q
    ||||||||||||||||||||||| || |||||| | | ||||||||  ||  | || ||||||||||||| ||||||||||||| |||||||||||| ||    
T  30422242 tctctctctgttttatccgctgc-atctagttcagaacatcacttcagaagtagaactctatttgcttctgatcagtgttttcagcttaggagaaaaaga 30422340  T
Q  136 agaaaaagctaacataattcaacccct 162  Q
    ||||||||| |||| ||||||||||||    
T  30422341 agaaaaagcaaacacaattcaacccct 30422367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 36 - 159
Target Start/End: Original strand, 20383162 - 20383284
Alignment:
Q  36 tctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttaggagaaaacga 135  Q
    ||||||||| ||||||||||||| ||||||| ||| | ||||||||  || || || | ||||||||||| || ||||||||||||||||||||||||||    
T  20383162 tctctctctattttatccgctgc-atttagtcctgaacatcacttcagaagcataactttatttgcttctgattagtgttttcaacttaggagaaaacga 20383260  T
Q  136 agaaaaagctaacataattcaacc 159  Q
    ||||||||| | || |||||||||    
T  20383261 agaaaaagccatcacaattcaacc 20383284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 36 - 161
Target Start/End: Complemental strand, 17796756 - 17796632
Alignment:
Q  36 tctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttaggagaaaacga 135  Q
    ||||||||||||||||||||||| | | ||||||| | ||||||||  ||  | || ||||| ||||||| ||||||||||||| |||||||||||| ||    
T  17796756 tctctctctgttttatccgctgcaact-agttctgaacatcacttcagaagtataactctatctgcttctgatcagtgttttcagcttaggagaaaaaga 17796658  T
Q  136 agaaaaagctaacataattcaacccc 161  Q
    ||||||||| |||| |||||||||||    
T  17796657 agaaaaagccaacacaattcaacccc 17796632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 13 - 179
Target Start/End: Original strand, 23185531 - 23185700
Alignment:
Q  13 aattgctttgtatctttctt----ctttctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaat 108  Q
    ||||||||||| ||||||||    |||||||||||||||||||||||| | || |||||||| | ||| ||||  ||  | || ||||| ||||||| ||    
T  23185531 aattgctttgtgtctttcttttctctttctctctctgttttatccgctac-atctagttctgaacatcgcttcagaagtagaactctatctgcttctgat 23185629  T
Q  109 cagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccctttatgtatttttctcac 179  Q
    ||||||||||| ||||| |||||| ||||||||| | |||| |||||||||||  | ||| ||||||||||    
T  23185630 cagtgttttcagcttagaagaaaaagaagaaaaaaccaacacaattcaacccccctttgtgtttttctcac 23185700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 15336862 - 15337019
Alignment:
Q  1 aggaacctgtataa-ttgctttgtatctttcttctttctctctctg-ttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatt 98  Q
    |||||| ||||||| ||||||||| ||||||||| ||||||||||| ||||||||||||| |  |||||||| | ||||||||  || || || |||||     
T  15336862 aggaacatgtataaattgctttgtgtctttcttccttctctctctgtttttatccgctgc-aaatagttctgaacatcacttcagaagcagaactctatc 15336960  T
Q  99 tgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaac 158  Q
    |||| || ||||||| |||| | ||||||||||| ||||||||||| |||| ||||||||    
T  15336961 tgctcctgatcagtgatttc-agttaggagaaaaagaagaaaaagcaaacacaattcaac 15337019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 15425927 - 15426084
Alignment:
Q  1 aggaacctgtataa-ttgctttgtatctttcttctttctctctctg-ttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatt 98  Q
    |||||| ||||||| ||||||||| ||||||||| ||||||||||| ||||||||||||| |  |||||||| | ||||||||  || || || |||||     
T  15425927 aggaacatgtataaattgctttgtgtctttcttccttctctctctgtttttatccgctgc-aaatagttctgaacatcacttcagaagcagaactctatc 15426025  T
Q  99 tgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaac 158  Q
    |||| || ||||||| |||| | ||||||||||| ||||||||||| |||| ||||||||    
T  15426026 tgctcctgatcagtgatttc-agttaggagaaaaagaagaaaaagcaaacacaattcaac 15426084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 15517231 - 15517388
Alignment:
Q  1 aggaacctgtataa-ttgctttgtatctttcttctttctctctctg-ttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatt 98  Q
    |||||| ||||||| ||||||||| ||||||||| ||||||||||| ||||||||||||| |  |||||||| | ||||||||  || || || |||||     
T  15517231 aggaacatgtataaattgctttgtgtctttcttccttctctctctgtttttatccgctgc-aaatagttctgaacatcacttcagaagcagaactctatc 15517329  T
Q  99 tgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaac 158  Q
    |||| || ||||||| |||| | ||||||||||| ||||||||||| |||| ||||||||    
T  15517330 tgctcctgatcagtgatttc-agttaggagaaaaagaagaaaaagcaaacacaattcaac 15517388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 46 - 121
Target Start/End: Original strand, 20256418 - 20256493
Alignment:
Q  46 ttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaac 121  Q
    |||||||||||||||||||||| |||||||||||||  || || || ||||||||||||| |||||||||||||||    
T  20256418 ttttatccgctgctatttagttttggaaatcacttcagaagcagaactctatttgcttctgatcagtgttttcaac 20256493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 18321930 - 18321987
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctctgttttatccgctgc 58  Q
    |||||| ||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  18321930 aggaacatgtataattactttgtgtctttcttctttctctctctgttttatccgctgc 18321987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 17526510 - 17526558
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctctgtttt 49  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  17526510 aggaacctgtataattgctttgtgtctttcttctttctctctctgtttt 17526558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 18679191 - 18679112
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctctgttttatccgctgctatttagttctggaaatcacttc 81  Q
    ||||||||||||||||||||||| |||||||||| ||| ||||| ||||||| ||||| ||||||||||| | ||||||||    
T  18679191 aggaacctgtataattgctttgtgtctttcttctctctttctctattttatctgctgc-atttagttctgaacatcacttc 18679112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 18718380 - 18718301
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctctgttttatccgctgctatttagttctggaaatcacttc 81  Q
    ||||||||||||||||||||||| |||||||||| ||| ||||| ||||||| ||||| ||||||||||| | ||||||||    
T  18718380 aggaacctgtataattgctttgtgtctttcttctctctttctctattttatctgctgc-atttagttctgaacatcacttc 18718301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 55 - 159
Target Start/End: Complemental strand, 39692862 - 39692758
Alignment:
Q  55 ctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataatt 154  Q
    |||||||||||||||| |||||| |||  || || || |||||||| || | |||| |||||||| ||||||||||||||||||||||  ||||| ||||    
T  39692862 ctgctatttagttctgaaaatcatttcagaagcagaactctatttgtttatgatcaatgttttcagcttaggagaaaacgaagaaaaaattaacacaatt 39692763  T
Q  155 caacc 159  Q
    |||||    
T  39692762 caacc 39692758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 161
Target Start/End: Complemental strand, 9319944 - 9319787
Alignment:
Q  3 gaacctgtataa-ttgctttgtatctttcttctttctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgc 101  Q
    |||||||||||| ||| ||||| |||||||||| ||||||||||||| ||||||||| | | ||||||| | ||||||||  ||  | || ||||| |||    
T  9319944 gaacctgtataaattgttttgtgtctttcttctctctctctctgttt-atccgctgcaagt-agttctgaacatcacttcagaagtagaactctatctgc 9319847  T
Q  102 ttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    |||| ||||||||||||| ||||| |||||| ||| |||||   |||| |||||||||||    
T  9319846 ttctgatcagtgttttcagcttagaagaaaaagaataaaaaatcaacacaattcaacccc 9319787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 90 - 161
Target Start/End: Original strand, 23264492 - 23264563
Alignment:
Q  90 aattctatttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    |||||||| | ||||| ||||||||||||| |||||||||||| ||||||||||| |||| |||||||||||    
T  23264492 aattctatctacttctgatcagtgttttcagcttaggagaaaaggaagaaaaagccaacacaattcaacccc 23264563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 18772069 - 18771892
Alignment:
Q  1 aggaacctgtataattgctttgtatctttct-tctttctctctctgttttatccgctgctatttag-ttctggaaatcacttcgaaaacaaaattctatt 98  Q
    ||||||||||||||||||||||| ||| ||| ||| ||||||||||||||||||||| | |||||| ||||| | |||| |||  ||    || |||||     
T  18772069 aggaacctgtataattgctttgtctctctctctctctctctctctgttttatccgctac-atttagattctgaacatcaattcagaagttgaactctatg 18771971  T
Q  99 tgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccctttatgtatttttctcac 179  Q
    ||||||| | |||||  ||||   |||||||| | |||||||||||||||| ||||||||||| || ||| ||||||||||    
T  18771970 tgcttctgaacagtgacttca--gtaggagaagatgaagaaaaagctaacacaattcaacccccttctgtgtttttctcac 18771892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 36104717 - 36104560
Alignment:
Q  1 aggaacctgtataa-ttgctttgtatctttcttctttctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctattt 99  Q
    |||||||||||||| |||||| || |||||||||| ||||||| | ||||||||||||| ||| ||||||||| ||| ||||  ||  | || || || |    
T  36104717 aggaacctgtataaattgctt-gtgtctttcttctctctctctgt-ttttatccgctgcaatt-agttctggacatctcttcagaagtagaactcaatct 36104621  T
Q  100 gcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    |||||| ||| |||||||||  ||||||||||| ||||||||||| |||| |||||||||||    
T  36104620 gcttctgatctgtgttttcag-ttaggagaaaatgaagaaaaagccaacacaattcaacccc 36104560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 45539352 - 45539420
Alignment:
Q  93 tctatttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||||| ||||||| ||||||||||||| |||||||||||| ||||||||||  |||| |||||||||||    
T  45539352 tctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagaaaacacaattcaacccc 45539420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 93 - 151
Target Start/End: Complemental strand, 16206514 - 16206456
Alignment:
Q  93 tctatttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacata 151  Q
    ||||| ||||||| ||||||||||||| |||||||||||| ||||||||||| ||||||    
T  16206514 tctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagccaacata 16206456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 93 - 161
Target Start/End: Complemental strand, 19706794 - 19706728
Alignment:
Q  93 tctatttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||||| ||||||| |||||||  |||||  ||||||||||||||||||||||||||| |||||||||||    
T  19706794 tctatctgcttctgatcagtgacttcaa--taggagaaaacgaagaaaaagctaacacaattcaacccc 19706728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 18122000 - 18122068
Alignment:
Q  93 tctatttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||||| ||||||| |||| |||||||| || ||||||||| ||||||||||| |||| |||||||||||    
T  18122000 tctatctgcttctgatcaatgttttcagctaaggagaaaaagaagaaaaagccaacacaattcaacccc 18122068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 19957111 - 19957269
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctct---gttttatccgctgctatttag-ttctggaaatcacttcgaaaacaaaattcta 96  Q
    ||||||||||||||||||||||| |||||||||| || ||||||    ||||||||||||| ||||||  |||| | |||||||| ||| |  || | ||    
T  19957111 aggaacctgtataattgctttgtgtctttcttctctccctctctctatttttatccgctgc-atttagaatctgaacatcacttcaaaagctgaaattta 19957209  T
Q  97 tttgcttctaatcagtg-ttttcaacttaggagaaaacgaagaaaaagctaacataattcaa 157  Q
    | ||||||| |||||||   ||||   ||||||||||||||||||||||||||| |||||||    
T  19957210 tctgcttctgatcagtgaacttca--gtaggagaaaacgaagaaaaagctaacacaattcaa 19957269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 16206648 - 16206605
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctct 44  Q
    ||||||||||||||||||||||| |||||||||| |||||||||    
T  16206648 aggaacctgtataattgctttgtgtctttcttctctctctctct 16206605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 26832453 - 26832410
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctct 44  Q
    ||||||||||||||||||||||| |||||||||| |||||||||    
T  26832453 aggaacctgtataattgctttgtgtctttcttctatctctctct 26832410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 93 - 154
Target Start/End: Complemental strand, 21932159 - 21932097
Alignment:
Q  93 tctatttgcttctaatcagtgtttt-caacttaggagaaaacgaagaaaaagctaacataatt 154  Q
    ||||| ||||||| ||||||||||| || |||||||||||| |||||||||||||||| ||||    
T  21932159 tctatctgcttctgatcagtgtttttcagcttaggagaaaaagaagaaaaagctaacacaatt 21932097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 15934435 - 15934476
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctct 42  Q
    ||||||||||||||||||||||| |||||||||| |||||||    
T  15934435 aggaacctgtataattgctttgtgtctttcttctctctctct 15934476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 13431393 - 13431463
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttct--ctctctgttttatccgctgctatttagttctg 70  Q
    |||||||||||||| |  ||||| |||||||||| |||  |||||||||||||||||||| |||||||||||    
T  13431393 aggaacctgtataaattgtttgtgtctttcttctctctttctctctgttttatccgctgc-atttagttctg 13431463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 18121882 - 18121925
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctct 44  Q
    |||||| |||||||||||||||| |||||||||| |||||||||    
T  18121882 aggaacttgtataattgctttgtgtctttcttctctctctctct 18121925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 154
Target Start/End: Complemental strand, 17914376 - 17914338
Alignment:
Q  116 ttcaacttaggagaaaacgaagaaaaagctaacataatt 154  Q
    |||| ||||||||||||||||||||||||||||| ||||    
T  17914376 ttcagcttaggagaaaacgaagaaaaagctaacacaatt 17914338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 161
Target Start/End: Complemental strand, 16188553 - 16188485
Alignment:
Q  93 tctatttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||||| || |||| ||||||| ||||| ||||||| |||| ||| ||||| |||||| |||||||||||    
T  16188553 tctatctgtttctgatcagtgctttcagcttaggaaaaaaagaataaaaaactaacacaattcaacccc 16188485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 161
Target Start/End: Complemental strand, 18676924 - 18676872
Alignment:
Q  109 cagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    |||||||| || ||||||||||   |||||||||||||||| |||||||||||    
T  18676924 cagtgtttccagcttaggagaatttgaagaaaaagctaacacaattcaacccc 18676872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 162
Target Start/End: Complemental strand, 22662326 - 22662286
Alignment:
Q  122 ttaggagaaaacgaagaaaaagctaacataattcaacccct 162  Q
    ||||||||||| ||||||||||| |||| ||||||||||||    
T  22662326 ttaggagaaaaagaagaaaaagccaacacaattcaacccct 22662286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 30422174 - 30422218
Alignment:
Q  1 aggaacctgtataa-ttgctttgtatctttcttctttctctctct 44  Q
    |||||||||||||| ||||||||| |||||||||| |||||||||    
T  30422174 aggaacctgtataaattgctttgtgtctttcttctctctctctct 30422218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 161
Target Start/End: Complemental strand, 31445385 - 31445317
Alignment:
Q  93 tctatttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||||| ||||||| ||||||||||||| ||||||| ||||  || ||||| | |||| |||||||||||    
T  31445385 tctatctgcttctgatcagtgttttcagcttaggaaaaaaaaaaaaaaaaaccaacacaattcaacccc 31445317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 45539209 - 45539253
Alignment:
Q  1 aggaacctgtataa-ttgctttgtatctttcttctttctctctct 44  Q
    |||||||||||||| ||||||||| |||||||||| |||||||||    
T  45539209 aggaacctgtataaattgctttgtgtctttcttctctctctctct 45539253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 85; Significance: 1e-40; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 20195 - 20354
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttg 100  Q
    ||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||| ||||||||||| | ||||||||  || || || |||||||     
T  20195 aggaacctgtataattgttttgtatctttcttctctctttctctgttttatccgctgc-atttagttctgaatatcacttcagaagcagaactctattta 20293  T
Q  101 cttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||||| |||||| |||| | |||||||||||||||||||||| |||||| |||||||||||    
T  20294 cttctgatcagtttttttagcttaggagaaaacgaagaaaaaactaacacaattcaacccc 20354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 110413 - 110480
Alignment:
Q  93 tctatttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||||| ||||||| ||| || ||||||  ||||||||||||||||||||| | |||| |||||||||||    
T  110413 tctatctgcttctgatctgtattttcag-ttaggagaaaacgaagaaaaaaccaacacaattcaacccc 110480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 84; Significance: 5e-40; HSPs: 3)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 36815 - 36651
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctct----ctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattcta 96  Q
    ||||||||||||||||| ||| | ||||||||||||||||    ||||||||||| |||||||| |||||||||| |||||||||  ||||| || | ||    
T  36815 aggaacctgtataattgttttttgtctttcttctttctctatgtctctgttttattcgctgctacttagttctgggaatcacttcagaaacagaacttta 36716  T
Q  97 tttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||||||| | || |||||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  36715 tttgcttatgattagtgttttcagcttaggagaaaacgaagaaaaagctaacacaattcaacccc 36651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 134875 - 134711
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctct----ctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattcta 96  Q
    ||||||||||||||||| ||| | ||||||||||||||||    ||||||||||| |||||||| |||||||||| |||||||||  ||||| || | ||    
T  134875 aggaacctgtataattgttttttgtctttcttctttctctatgtctctgttttattcgctgctacttagttctgggaatcacttcagaaacagaacttta 134776  T
Q  97 tttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||||||| | || |||||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  134775 tttgcttatgattagtgttttcagcttaggagaaaacgaagaaaaagctaacacaattcaacccc 134711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 158530 - 158375
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttct----ttctctctctgttttatccgctgctatttag-ttctggaaatcacttcgaaaacaaaattct 95  Q
    ||||||||||||||||||||||| ||||||||||     ||||||| |||||||||||||||   |||| || || | ||||||||  ||    || |||    
T  158530 aggaacctgtataattgctttgtgtctttcttctctccctctctctatgttttatccgctgc---ttagattatgaacatcacttcagaagtggaactct 158434  T
Q  96 atttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataatt 154  Q
    || |||||||||| |||| ||||| ||||||| ||||||||||| |||| |||| ||||    
T  158433 atctgcttctaataagtgatttcagcttaggataaaacgaagaataagcaaacacaatt 158375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 78; Significance: 2e-36; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 36 - 161
Target Start/End: Original strand, 22202615 - 22202740
Alignment:
Q  36 tctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttaggagaaaacga 135  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||  || || || ||||||||||| | |||||||||||||  ||||||||||||||    
T  22202615 tctctctctgttttatccgctgctatttagttctggaaatcacgtcagaagcagaactctatttgcttatgatcagtgttttcagtttaggagaaaacga 22202714  T
Q  136 agaaaaagctaacataattcaacccc 161  Q
    |||||||| ||||| |||||||||||    
T  22202715 agaaaaagataacacaattcaacccc 22202740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 36 - 158
Target Start/End: Original strand, 33257102 - 33257224
Alignment:
Q  36 tctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttaggagaaaacga 135  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||| ||| || || | ||||||||||| ||| ||||||||| ||||||||||| |||    
T  33257102 tctctctctgttttatctgctgctacttagttctggaaatcacttcaaaagcataactatatttgcttctgatcggtgttttcagcttaggagaaagcga 33257201  T
Q  136 agaaaaagctaacataattcaac 158  Q
    |||||||||||||| ||||||||    
T  33257202 agaaaaagctaacacaattcaac 33257224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 36 - 158
Target Start/End: Original strand, 33277274 - 33277396
Alignment:
Q  36 tctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttaggagaaaacga 135  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||| ||| || || | ||||||||||| ||| ||||||||| ||||||||||| |||    
T  33277274 tctctctctgttttatctgctgctacttagttctggaaatcacttcaaaagcataactatatttgcttctgatcggtgttttcagcttaggagaaagcga 33277373  T
Q  136 agaaaaagctaacataattcaac 158  Q
    |||||||||||||| ||||||||    
T  33277374 agaaaaagctaacacaattcaac 33277396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 36 - 143
Target Start/End: Original strand, 22202493 - 22202600
Alignment:
Q  36 tctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttaggagaaaacga 135  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||  || || || ||||||||||| | |||||||||||||  ||||||||||||||    
T  22202493 tctctctctgttttatccgctgctatttagttctggaaatcacgtcagaagcagaactctatttgcttatgatcagtgttttcagtttaggagaaaacga 22202592  T
Q  136 agaaaaag 143  Q
    ||||||||    
T  22202593 agaaaaag 22202600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 36 - 179
Target Start/End: Original strand, 28493054 - 28493196
Alignment:
Q  36 tctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttaggagaaaacga 135  Q
    |||||||||||||||||||||| || ||||||||| ||||||||||  || || || ||||||||||| | ||| ||||||||| |||||||||| ||||    
T  28493054 tctctctctgttttatccgctgttacttagttctgaaaatcacttcagaagcagaactctatttgcttatgatctgtgttttcaccttaggagaagacga 28493153  T
Q  136 agaaaaagctaacataattcaacccctttatgtatttttctcac 179  Q
    ||||||| |||||| |||||||||||  | ||||||||||||||    
T  28493154 agaaaaaactaacacaattcaacccccct-tgtatttttctcac 28493196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 10756808 - 10756654
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttg 100  Q
    |||||| |||||||||| ||||| ||||||||||    |||||||||||||||||||| ||||||||||| | |||||| |  ||  | |||| ||| |     
T  10756808 aggaacatgtataattgatttgtgtctttcttct----ctctctgttttatccgctgc-atttagttctgaacatcactccagaagtagaattttatata 10756714  T
Q  101 cttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaaccc 160  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||| ||||||||||    
T  10756713 cttctaatcagtgttttcaacttagaagaaaacgaagaaaaaactaacacaattcaaccc 10756654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 22428034 - 22428194
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctct--ctgtttt-atccgctgctatttagttctggaaatcacttcgaaaacaaaattctat 97  Q
    ||||||||||||||||| ||||| |||||||| |||||||||  ||||||| ||| ||||| | ||||||||| | |||| |||  ||  | || |||||    
T  22428034 aggaacctgtataattgatttgtgtctttcttatttctctctatctgtttttatctgctgcaagttagttctgaacatcatttcagaagtagaactctat 22428133  T
Q  98 ttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaac 158  Q
     ||||||| ||||||||||||| |||||||||||||||||||||||  |||| ||||||||    
T  22428134 ctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagtaaacacaattcaac 22428194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 36 - 161
Target Start/End: Complemental strand, 48703596 - 48703471
Alignment:
Q  36 tctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttaggagaaaacga 135  Q
    ||||||||||||||||||||||||| |||||||| |||||||| ||  || ||||| |||||||| |||| || |||||||||| |||| |||| || ||    
T  48703596 tctctctctgttttatccgctgctacttagttcttgaaatcacgtcagaagcaaaactctatttgtttctgataagtgttttcagcttaagagataagga 48703497  T
Q  136 agaaaaagctaacataattcaacccc 161  Q
    |||||||  ||||| |||||||||||    
T  48703496 agaaaaaattaacacaattcaacccc 48703471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 26702826 - 26702906
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctctgttttatccgctgctatttagttctggaaatcacttc 81  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| || |||||||| | ||||||||    
T  26702826 aggaacctgtataattgctttgtatctttcttctctttctctctgttttatccgctgcaatctagttctgaacatcacttc 26702906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 2834041 - 2833876
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctct------gttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattc 94  Q
    |||||| |||||||||| ||||| |||||||||| |||||||||      |||||||||||||| || |||||||| | ||||||||  ||  | |  ||    
T  2834041 aggaacttgtataattgttttgtgtctttcttctctctctctctctctctgttttatccgctgc-atctagttctgaacatcacttcagaagtagagctc 2833943  T
Q  95 tatttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||| ||||||| ||||||||||||| |||||||||||| ||||||||||| |||| |||||||||||    
T  2833942 tatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagccaacacaattcaacccc 2833876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 36 - 161
Target Start/End: Complemental strand, 30892409 - 30892285
Alignment:
Q  36 tctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttaggagaaaacga 135  Q
    ||||||||| ||||||||| ||| ||||||||||| | |||||||   ||  | || ||||||||||||| ||||||||||||| ||||| ||||| |||    
T  30892409 tctctctctattttatccgttgc-atttagttctgaacatcactttagaagtagaactctatttgcttctgatcagtgttttcagcttagaagaaatcga 30892311  T
Q  136 agaaaaagctaacataattcaacccc 161  Q
    |||||||||||||| |||||||||||    
T  30892310 agaaaaagctaacacaattcaacccc 30892285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 36 - 161
Target Start/End: Complemental strand, 7309136 - 7309011
Alignment:
Q  36 tctctctctgtttt-atccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttaggagaaaacg 134  Q
    |||||||||||||| ||||||||| | ||||| ||| | |||||||   || || |||||||||||||||| |||||||||||| | |||||||||||||    
T  7309136 tctctctctgtttttatccgctgcaacttagtcctgaacatcactttagaagcagaattctatttgcttctgatcagtgttttc-agttaggagaaaacg 7309038  T
Q  135 aagaaaaagctaacataattcaacccc 161  Q
    |||||||| | |||| |||||||||||    
T  7309037 aagaaaaaaccaacacaattcaacccc 7309011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 36133588 - 36133431
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttg 100  Q
    ||||||||||||||||||||||| ||||||||||  |||||| | ||||||||||||| || |||| | | | ||||||||  ||  |||| |||||       
T  36133588 aggaacctgtataattgctttgtttctttcttct--ctctctgttttttatccgctgc-atctagtcccgaacatcacttcataagtaaaactctatcga 36133492  T
Q  101 cttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||| | ||||||||||||| |||| ||||||| ||||||||||| |||| |||||||||||    
T  36133491 cttatgatcagtgttttcagcttaagagaaaaagaagaaaaagccaacacaattcaacccc 36133431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 20959821 - 20959889
Alignment:
Q  93 tctatttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||||| ||||||| ||||||||||||| |||||||||||||||||||||| |||||| |||||||||||    
T  20959821 tctatctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaaactaacacaattcaacccc 20959889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 32786634 - 32786797
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttcttt----ctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattcta 96  Q
    ||||||||||||||||||||||| |||||||||| |    |||||||||||||||||||||| || || ||  | | ||||||||  ||    || | ||    
T  32786634 aggaacctgtataattgctttgtgtctttcttctctttctctctctctgttttatccgctgc-atctaattacgaacatcacttcagaagtggaacttta 32786732  T
Q  97 tttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    | ||||||| |||||||||| ||||||||||||||| ||| ||||| |||||| |||||||||||    
T  32786733 tctgcttctgatcagtgtttacaacttaggagaaaaagaaaaaaaatctaacacaattcaacccc 32786797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 36 - 158
Target Start/End: Complemental strand, 12283737 - 12283617
Alignment:
Q  36 tctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttaggagaaaacga 135  Q
    ||||||||||||||||||||||| ||||||| ||| | |||| |||  ||  | || |||| |||||| | | ||||||||||| |||||||||||||||    
T  12283737 tctctctctgttttatccgctgc-atttagtcctgaatatcatttcagaaggagaactctacttgcttatga-cagtgttttcagcttaggagaaaacga 12283640  T
Q  136 agaaaaagctaacataattcaac 158  Q
    |||||||||||||| ||||||||    
T  12283639 agaaaaagctaacacaattcaac 12283617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 22600882 - 22601045
Alignment:
Q  1 aggaacctgtataattgctttgtatctttct---tctttctctctctgtttt-atccgctgctatttagttctggaaatcacttcgaaaacaaaattcta 96  Q
    ||||||||||||||||||||||| ||| |||   ||| |||||||||||||| ||||||||| || |||| ||| | ||||||||  ||  | || ||||    
T  22600882 aggaacctgtataattgctttgtgtctctctctctctctctctctctgtttttatccgctgc-atctagtcctgaacatcacttcagaagtagaactcta 22600980  T
Q  97 tttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    | || |||| |||| ||||||||  ||||||||||| ||||||||||| |||| |||||||||||    
T  22600981 tctgattctgatcaatgttttcaggttaggagaaaaagaagaaaaagccaacacaattcaacccc 22601045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 8 - 174
Target Start/End: Complemental strand, 1899724 - 1899554
Alignment:
Q  8 tgtataattgctttgtatctttcttctttctctctctgt-----tttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgct 102  Q
    |||||||||||||||| |||||||||| ||||||||| |     |||||||||||| || ||||  || | |||||||   ||  | || ||||| ||||    
T  1899724 tgtataattgctttgtgtctttcttctctctctctctctctgtttttatccgctgc-atctagtcatgaacatcactttagaagtagaactctatctgct 1899626  T
Q  103 tctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccctttatgtattttt 174  Q
    ||| ||||||||||||| |||||||||||| ||||||||||  |||| ||||||||||| || ||| |||||    
T  1899625 tctgatcagtgttttcagcttaggagaaaaagaagaaaaagtcaacacaattcaacccccttttgtgttttt 1899554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 158
Target Start/End: Complemental strand, 29215160 - 29215023
Alignment:
Q  20 ttgtatctttcttctttctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttca 119  Q
    |||| ||| |||||| ||| ||||||||||||||||||| || |||||||| | ||||||||  ||    || ||||| ||||||| |||||||||||||    
T  29215160 ttgtgtctctcttctctctttctctgttttatccgctgc-atctagttctgaatatcacttcagaagtggaactctatctgcttctgatcagtgttttca 29215062  T
Q  120 acttaggagaaaacgaagaaaaagctaacataattcaac 158  Q
     ||||| |||||| ||||||||| |||| | ||||||||    
T  29215061 gcttagaagaaaaagaagaaaaaactaatacaattcaac 29215023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 36 - 161
Target Start/End: Original strand, 23037258 - 23037382
Alignment:
Q  36 tctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttaggagaaaacga 135  Q
    ||||||||||||||||||||||| || |||| ||| | ||||||||  ||  | || ||||| ||||||| ||||||||||||| |||| || |||| ||    
T  23037258 tctctctctgttttatccgctgc-atctagtcctgaacatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttatgataaaaaga 23037356  T
Q  136 agaaaaagctaacataattcaacccc 161  Q
    ||||||||| |||  |||||||||||    
T  23037357 agaaaaagccaacccaattcaacccc 23037382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 36 - 143
Target Start/End: Complemental strand, 2266430 - 2266324
Alignment:
Q  36 tctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttaggagaaaacga 135  Q
    ||||||||||||||||||||||| || ||||| |  | ||||||||  ||  | || ||||| || |||| ||||||||||||| |||||||||||||||    
T  2266430 tctctctctgttttatccgctgc-atctagttatatacatcacttcagaagtagaactctatctgattctgatcagtgttttcagcttaggagaaaacga 2266332  T
Q  136 agaaaaag 143  Q
    ||||||||    
T  2266331 agaaaaag 2266324  T

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Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 101 - 179
Target Start/End: Original strand, 14294081 - 14294159
Alignment:
Q  101 cttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccctttatgtatttttctcac 179  Q
    ||||| ||||||||||||| |||||||||||| ||||||||||| |||| |||| | ||||||  ||| ||||||||||    
T  14294081 cttctgatcagtgttttcagcttaggagaaaatgaagaaaaagcaaacacaattaacccccttcttgtgtttttctcac 14294159  T

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Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 14264130 - 14264285
Alignment:
Q  1 aggaacctgtataa-ttgctttgtatctttcttctttctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctattt 99  Q
    |||||||||||||| |||||| || ||||||||||  |||||||||||||||||||||| |  |||||||| | ||||||||  ||  | |||||||| |    
T  14264130 aggaacctgtataaattgctt-gtgtctttcttct--ctctctctgttttatccgctgc-aactagttctgaacatcacttcagaagtagaattctatct 14264225  T
Q  100 gcttctaatcagtg-ttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    |||| | ||||||| |||||| |||||||||||   |||||||||  |||| |||||||||||    
T  14264226 gcttttgatcagtgtttttcagcttaggagaaa---aagaaaaagaaaacacaattcaacccc 14264285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 160
Target Start/End: Complemental strand, 18614172 - 18614135
Alignment:
Q  123 taggagaaaacgaagaaaaagctaacataattcaaccc 160  Q
    ||||||||||||||||||||||||||||||||||||||    
T  18614172 taggagaaaacgaagaaaaagctaacataattcaaccc 18614135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 21215372 - 21215530
Alignment:
Q  1 aggaacctgtataa-ttgctttgtatctttcttctttct--ctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctat 97  Q
    |||||||||||||| |||||| || |||||||||| |||  |||||||||||||||||||| ||||||||||| | ||| |||| |||  | || |||||    
T  21215372 aggaacctgtataaattgctt-gtgtctttcttctgtctttctctctgttttatccgctgc-atttagttctgaacatctcttcaaaagtagaactctat 21215469  T
Q  98 ttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
     ||||||| | |  ||  ||||  ||||||||||| |||||||||||||||| |||||||||||    
T  21215470 ctgcttctgaac--tgcattcag-ttaggagaaaaagaagaaaaagctaacacaattcaacccc 21215530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 44824455 - 44824611
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttg 100  Q
    |||||||||||||| |  ||||| ||||||||||  |||||||||||||||||||||| | ||||||||| | ||| ||||  ||  | || |  || ||    
T  44824455 aggaacctgtataaattgtttgtgtctttcttct--ctctctctgttttatccgctgc-aattagttctgaacatctcttcagaagtagaactacatctg 44824551  T
Q  101 cttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||||| ||| |||||||| | ||||||||||| |||||||| || |||| |||||||||||    
T  44824552 cttctgatctgtgttttc-agttaggagaaaaagaagaaaaggccaacacaattcaacccc 44824611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 28492977 - 28493020
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctct 44  Q
    ||||||||||||||||||||||| |||||||||| |||||||||    
T  28492977 aggaacctgtataattgctttgtgtctttcttctctctctctct 28493020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 161
Target Start/End: Complemental strand, 38281642 - 38281583
Alignment:
Q  102 ttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    |||| ||||||||||||| |||||||||||| ||||||||||| |||| ||| |||||||    
T  38281642 ttctgatcagtgttttcagcttaggagaaaaggaagaaaaagccaacacaatccaacccc 38281583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 38281950 - 38281907
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctct 44  Q
    ||||||||||||||||||||||| |||||||||| |||||||||    
T  38281950 aggaacctgtataattgctttgtgtctttcttctatctctctct 38281907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 161
Target Start/End: Complemental strand, 22153172 - 22153046
Alignment:
Q  36 tctctctctgtttt-atccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttaggagaaaacg 134  Q
    |||||||||||||| ||||||||| | || || ||| | ||||||||  ||  | || ||||| ||||||| ||||  ||||||| || ||||||||| |    
T  22153172 tctctctctgtttttatccgctgcaagtttgtcctgaacatcacttcagaagtagaactctatctgcttctgatcaaagttttcagctaaggagaaaaag 22153073  T
Q  135 aagaaaaagctaacataattcaacccc 161  Q
    |||||||||| |||| |||||||||||    
T  22153072 aagaaaaagccaacacaattcaacccc 22153046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 179
Target Start/End: Original strand, 22465611 - 22465691
Alignment:
Q  101 cttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaa--cccctttatgtatttttctcac 179  Q
    ||||| ||||||||||||| |||||||| ||||||| ||||||  |||| |||||||  ||||||  ||||||||||||||    
T  22465611 cttctgatcagtgttttcagcttaggagtaaacgaataaaaagtaaacacaattcaaccccccttcttgtatttttctcac 22465691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 161
Target Start/End: Complemental strand, 1577137 - 1577069
Alignment:
Q  93 tctatttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||||| ||||||| ||||||||||||| | || ||||||| ||||||||| | |||| |||||||||||    
T  1577137 tctatctgcttctgatcagtgttttcagcataagagaaaaagaagaaaaaaccaacacaattcaacccc 1577069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 162
Target Start/End: Original strand, 21135977 - 21136017
Alignment:
Q  122 ttaggagaaaacgaagaaaaagctaacataattcaacccct 162  Q
    ||||||||||| |||||||||||||||| ||||||||||||    
T  21135977 ttaggagaaaaagaagaaaaagctaacacaattcaacccct 21136017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 161
Target Start/End: Original strand, 21205596 - 21205715
Alignment:
Q  38 tctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttaggagaaaacgaag 137  Q
    ||||||||||||||||||||| ||||||||||| | ||| |||| |||  | || ||||| ||||||| | |  ||  ||||  ||||||||||| ||||    
T  21205596 tctctctgttttatccgctgc-atttagttctgaacatctcttcaaaagtagaactctatctgcttctgaac--tgcattcag-ttaggagaaaaagaag 21205691  T
Q  138 aaaaagctaacataattcaacccc 161  Q
    |||||||||||| |||||||||||    
T  21205692 aaaaagctaacacaattcaacccc 21205715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 16236002 - 16236045
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctct 44  Q
    ||||||||||||||||| ||||| |||||||||| |||||||||    
T  16236002 aggaacctgtataattgttttgtgtctttcttctctctctctct 16236045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 161
Target Start/End: Original strand, 21121871 - 21121910
Alignment:
Q  122 ttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||||||||||| |||||||||||||||| |||||||||||    
T  21121871 ttaggagaaaaagaagaaaaagctaacacaattcaacccc 21121910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 22202430 - 22202473
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctct 44  Q
    ||||| ||||||||||||||||| |||||||||| |||||||||    
T  22202430 aggaagctgtataattgctttgtgtctttcttctctctctctct 22202473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 30892478 - 30892435
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctct 44  Q
    ||||| ||||||||||||||||| |||||||||| |||||||||    
T  30892478 aggaatctgtataattgctttgtgtctttcttctctctctctct 30892435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 161
Target Start/End: Original strand, 21192703 - 21192741
Alignment:
Q  123 taggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||||||||||||||||||||||| ||| |||||||||||    
T  21192703 taggagaaaacgaagaaaaagcttacacaattcaacccc 21192741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 161
Target Start/End: Original strand, 25449333 - 25449445
Alignment:
Q  47 tttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagcta 146  Q
    |||||||||||| ||| ||||||| | ||||||||  ||  | || ||||| ||||||| |||||||||||||  ||||||||||| ||| ||| ||| |    
T  25449333 tttatccgctgcaatt-agttctgaacatcacttcagaagtataactctatctgcttctgatcagtgttttcag-ttaggagaaaaagaaaaaatagcca 25449430  T
Q  147 acataattcaacccc 161  Q
    ||| |||||||||||    
T  25449431 acacaattcaacccc 25449445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 160
Target Start/End: Original strand, 12625367 - 12625404
Alignment:
Q  123 taggagaaaacgaagaaaaagctaacataattcaaccc 160  Q
    |||||||||||||||||||| |||||| ||||||||||    
T  12625367 taggagaaaacgaagaaaaaactaacacaattcaaccc 12625404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 10250373 - 10250314
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctc--tctctgttttatccgctgc 58  Q
    |||||||||||||| |  ||||| |||||||||| ||||  |||||||||||||||||||    
T  10250373 aggaacctgtataaattgtttgtgtctttcttctctctctatctctgttttatccgctgc 10250314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 19214996 - 19214952
Alignment:
Q  1 aggaacctgtataa-ttgctttgtatctttcttctttctctctct 44  Q
    |||||||||||||| ||||||||| ||||||||| ||||||||||    
T  19214996 aggaacctgtataaattgctttgtgtctttcttccttctctctct 19214952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 21121760 - 21121830
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttct--ctctctgttttatccgctgctatttagttctg 70  Q
    |||||||||||||| |  ||||| || ||||||| |||  |||||||||||||||||||| |||||||||||    
T  21121760 aggaacctgtataaattgtttgtgtccttcttctctctttctctctgttttatccgctgc-atttagttctg 21121830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 21983980 - 21983910
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttct--ctctctgttttatccgctgctatttagttctg 70  Q
    |||||||||||||| |  ||||| |||||||| | |||  |||||||||||||||||||| |||||||||||    
T  21983980 aggaacctgtataaattttttgtgtctttcttttctctttctctctgttttatccgctgc-atttagttctg 21983910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 44
Target Start/End: Original strand, 22465513 - 22465549
Alignment:
Q  8 tgtataattgctttgtatctttcttctttctctctct 44  Q
    |||||||||||||| | ||||||||||||||||||||    
T  22465513 tgtataattgctttatgtctttcttctttctctctct 22465549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 14503 - 14336
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctct--------gttttatccgctgctatttagttctggaaatcacttcgaaaacaaaat 92  Q
    ||||||||||||||||||||||| |||||||||| |||||||||        |||||||||||||| ||||||| ||| | |||||||| ||| || ||     
T  14503 aggaacctgtataattgctttgtgtctttcttctctctctctctctctctctgttttatccgctgc-atttagtcctgaacatcacttcaaaagcagaac 14405  T
Q  93 tctatttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||||||||||| | |||| |||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  14404 tctatttgcttttgatcattgttttcagcttaggagaaaacgaagaaaaagctaacacaattcaacccc 14336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 14351 - 14203
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctct--gttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatt 98  Q
    |||| |||||||||||||||||| ||||| ||||||||||||||  |||||||||||||||||||||||||||||||||||||  || |  || ||||||    
T  14351 aggagcctgtataattgctttgtgtctttattctttctctctctctgttttatccgctgctatttagttctggaaatcacttcagaagccgaactctatt 14252  T
Q  99 tgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaa 147  Q
    ||||||| |||||| |||| | ||||||||| |||||| ||||| ||||    
T  14251 tgcttctgatcagtatttttagcttaggagagaacgaataaaaaactaa 14203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 28153 - 28300
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctc------tctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattc 94  Q
    ||||||||||||||||||||||| |||||||||||||||      ||||||||||||||||||||| ||||||||||||||||||||  || ||||| |     
T  28153 aggaacctgtataattgctttgtgtctttcttctttctctctctctctctgttttatccgctgctacttagttctggaaatcacttcagaagcaaaactt 28252  T
Q  95 tatttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaag 143  Q
    ||||||| |||||| |||||||| | ||||||||||||||| |||||||    
T  28253 tatttgc-tctaataagtgtttttagcttaggagaaaacgaggaaaaag 28300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 1393 - 1245
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctct--gttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatt 98  Q
    |||| |||||||||||||||||| ||||| ||||||||||||||  |||||||||||||||||||||||||||||||||||||  || |  || ||||||    
T  1393 aggagcctgtataattgctttgtgtctttattctttctctctctctgttttatccgctgctatttagttctggaaatcacttcagaagccgaactctatt 1294  T
Q  99 tgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaa 147  Q
    ||||||| |||||| |||| | ||||||||| |||||| ||||| ||||    
T  1293 tgcttctgatcagtatttttagcttaggagagaacgaataaaaaactaa 1245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 70; Significance: 1e-31; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 36 - 161
Target Start/End: Complemental strand, 7226 - 7101
Alignment:
Q  36 tctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttaggagaaaacga 135  Q
    ||||||||| |||||||||||||||||||||||||||||||||||   || || || ||||||||||||| ||||||||||||| ||||||||||||  |    
T  7226 tctctctctattttatccgctgctatttagttctggaaatcacttaagaagcataactctatttgcttctgatcagtgttttcagcttaggagaaaaata 7127  T
Q  136 agaaaaagctaacataattcaacccc 161  Q
    |||||||| ||||| | |||||||||    
T  7126 agaaaaagttaacagagttcaacccc 7101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 7311 - 7268
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctct 44  Q
    ||||||||||||||||||| ||| |||||||||| |||||||||    
T  7311 aggaacctgtataattgctatgtgtctttcttctctctctctct 7268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 211741 - 211585
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctctgttttatccgctgctatttagttctggaaatcacttc-gaaaacaaaattctattt 99  Q
    |||||| |||||||||||||||| |||||||||||||||||| | ||||||||||||| | ||| | ||| | |||||||| ||||  | |||| ||| |    
T  211741 aggaacttgtataattgctttgtgtctttcttctttctctctgt-ttttatccgctgcaagttattcctgaacatcacttcagaaagtagaattatatct 211643  T
Q  100 gcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaa 157  Q
    |||||| ||||||||||||| |||||||||||||||| |||||||||||| |||||||    
T  211642 gcttctgatcagtgttttcagcttaggagaaaacgaataaaaagctaacacaattcaa 211585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0479 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0479
Description:

Target: scaffold0479; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 9349 - 9188
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctctgtttt-atccgctgctatttagttctggaa-atcacttcgaaaacaaaattctatt 98  Q
    |||||||| |||||||||||||| | |||||||||| |||||||||||| ||||||||| |   | |||| ||| ||||||||  ||  | ||||||||     
T  9349 aggaacctatataattgctttgtgtgtttcttctttgtctctctgtttttatccgctgcaagaca-ttcttgaacatcacttcagaagtagaattctatc 9251  T
Q  99 tgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  9250 tgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaattcaacccc 9188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0567 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0567
Description:

Target: scaffold0567; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 9291 - 9120
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctctgt-----------tttatccgctgctatttagttctggaaatcacttcgaaaacaa 89  Q
    ||||||||||||||||||||||| |||||||||||||||||||| |           ||||||||| || | |||||  || | ||||||||  || ||     
T  9291 aggaacctgtataattgctttgtgtctttcttctttctctctctctctctctctgtttttatccgcggcaagttagtgttgaacatcacttcagaagcag 9192  T
Q  90 aattctatttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
     ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||    
T  9191 tattctatttgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagcttacacaattcaacccc 9120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0315 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0315
Description:

Target: scaffold0315; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 8044 - 7890
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttg 100  Q
    |||||| |||||||||||||||| ||||||||||  |||||||||||||||||||||| ||| || |||      ||||||  ||    || ||||| ||    
T  8044 aggaacatgtataattgctttgtgtctttcttct--ctctctctgttttatccgctgcaatt-agatctta----cacttcagaagtggaactctatctg 7952  T
Q  101 cttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccct 162  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  7951 cttctgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaattcaacccct 7890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 10833 - 10985
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctctgt---tttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctat 97  Q
    |||||||||||||||||| |||| |||||||||||||||||||| |   ||| |||||||| | ||||| ||| | ||||||||  ||  | || |||||    
T  10833 aggaacctgtataattgcattgtgtctttcttctttctctctctctgtttttttccgctgcaagttagtcctgaacatcacttcagaagtagaactctat 10932  T
Q  98 ttgctt-ctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaaca 149  Q
     ||||| || |||||| |||||| |||||||||||||||||||||||||||||    
T  10933 ctgctttctgatcagtattttcagcttaggagaaaacgaagaaaaagctaaca 10985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 15497 - 15649
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctctgt---tttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctat 97  Q
    |||||||||||||||||| |||| |||||||||||||||||||| |   ||| |||||||| | ||||| ||| | ||||||||  ||  | || |||||    
T  15497 aggaacctgtataattgcattgtgtctttcttctttctctctctctgtttttttccgctgcaagttagtcctgaacatcacttcagaagtagaactctat 15596  T
Q  98 ttgctt-ctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaaca 149  Q
     ||||| || |||||| |||||| |||||||||||||||||||||||||||||    
T  15597 ctgctttctgatcagtattttcagcttaggagaaaacgaagaaaaagctaaca 15649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 36 - 161
Target Start/End: Original strand, 717 - 841
Alignment:
Q  36 tctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttaggagaaaacga 135  Q
    ||||||||||||||||||||||| || |||||||| | ||||||||  ||  | ||||| || ||||||| ||||||||||||| |||||||||||  ||    
T  717 tctctctctgttttatccgctgc-atctagttctgaacatcacttcagaagtagaattccatctgcttctgatcagtgttttcagcttaggagaaataga 815  T
Q  136 agaaaaagctaacataattcaacccc 161  Q
    |||||||| ||||| |||||||||||    
T  816 agaaaaagttaacacaattcaacccc 841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 46 - 161
Target Start/End: Complemental strand, 25765 - 25650
Alignment:
Q  46 ttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagct 145  Q
    ||||||||||||| | ||||| ||| | ||||||||  ||  | || ||||||||||||| ||||||||||||| |||||||||||||||||||||||      
T  25765 ttttatccgctgcaagttagtcctgaacatcacttcagaagtagaactctatttgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagta 25666  T
Q  146 aacataattcaacccc 161  Q
    |||| |||||||||||    
T  25665 aacacaattcaacccc 25650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 25845 - 25802
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctct 44  Q
    ||||||||||||||||||||||| ||||| ||| ||||||||||    
T  25845 aggaacctgtataattgctttgtgtcttttttccttctctctct 25802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 7278 - 7163
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctct--gttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatt 98  Q
    ||||||||||||||||||||||| ||||||||||||||||||||   ||||||||||||| |||||||| || | |||||||| |||  | || ||||||    
T  7278 aggaacctgtataattgctttgtgtctttcttctttctctctcttatttttatccgctgc-atttagttgtgaacatcacttcaaaagtagaactctatt 7180  T
Q  99 tgcttctaatcagtgtt 115  Q
    ||||||| || ||||||    
T  7179 tgcttctgataagtgtt 7163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 90 - 157
Target Start/End: Complemental strand, 914 - 847
Alignment:
Q  90 aattctatttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaa 157  Q
    |||||||| ||||||| ||||||||||||| ||||||||||||||||||||||| ||||| |||||||    
T  914 aattctatctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagttaacacaattcaa 847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 1044 - 1001
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctct 44  Q
    ||||||||||||||||||||||| |||||||||| |||||||||    
T  1044 aggaacctgtataattgctttgtgtctttcttctctctctctct 1001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 7209 - 7055
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttg 100  Q
    ||||||||||||||||| ||||| |||| ||||  ||||||||||||||||||| ||| || ||||||| || ||||||||  ||    ||  |||| ||    
T  7209 aggaacctgtataattgatttgtgtcttccttc--tctctctctgttttatccggtgc-atctagttctcgacatcacttcagaagtggaacactatctg 7113  T
Q  101 cttctaatcagtg-ttttcaacttaggagaaaacgaagaaaaagctaacataattcaa 157  Q
    ||||| ||||||| |||||| |||  ||||||| |||||||||||||||| |||||||    
T  7112 cttctgatcagtgtttttcagcttccgagaaaaagaagaaaaagctaacacaattcaa 7055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 36 - 161
Target Start/End: Complemental strand, 2315 - 2191
Alignment:
Q  36 tctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttaggagaaaacga 135  Q
    ||||||||||||||||||||| | || |||||| | | ||||||||  ||  | || ||||| ||||||| |||||||| |||| |||||||||||| ||    
T  2315 tctctctctgttttatccgctac-atctagttcagaacatcacttcagaagtagaactctatctgcttctgatcagtgtattcagcttaggagaaaaaga 2217  T
Q  136 agaaaaagctaacataattcaacccc 161  Q
    ||||||||  |||| |||||||||||    
T  2216 agaaaaagaaaacacaattcaacccc 2191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 2833 - 2676
Alignment:
Q  1 aggaacctgtataa-ttgctttgtatctttcttctttctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctattt 99  Q
    |||||||||||||| |||||| || |||||||||| ||||||| | ||||||||||||| ||| ||||||||| ||| ||||  ||  | || || || |    
T  2833 aggaacctgtataaattgctt-gtgtctttcttctctctctctgt-ttttatccgctgcaatt-agttctggacatctcttcagaagtagaactcaatct 2737  T
Q  100 gcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    |||||| ||| |||||||||  ||||||||||| ||||||||||| |||| |||||||||||    
T  2736 gcttctgatctgtgttttcag-ttaggagaaaatgaagaaaaagccaacacaattcaacccc 2676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 93 - 161
Target Start/End: Complemental strand, 16276 - 16208
Alignment:
Q  93 tctatttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||||| ||||||| ||||||  ||||| |||||||||||||||||||| |||||||| |||||||||||    
T  16276 tctatctgcttctgatcagtaatttcagcttaggagaaaacgaagaaatagctaacacaattcaacccc 16208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 161
Target Start/End: Complemental strand, 17677 - 17551
Alignment:
Q  36 tctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttaggagaaa--ac 133  Q
    ||||||||||||||||||||||  | | ||||||| | ||||||||  ||  | || ||||||||||||| ||||||||||||| |||||||||||  |     
T  17677 tctctctctgttttatccgctggaact-agttctgaacatcacttcagaagtagaaatctatttgcttctgatcagtgttttcagcttaggagaaaagaa 17579  T
Q  134 gaagaaaaagctaacataattcaacccc 161  Q
    ||||||||||| |||| ||||| |||||    
T  17578 gaagaaaaagccaacacaattcgacccc 17551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 161
Target Start/End: Original strand, 21758 - 21824
Alignment:
Q  95 tatttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||||||||| | ||||||||||||||||||  |||||||||||||||||  |||| |||||||||||    
T  21758 tatttgcttatgatcagtgttttcaacttaaaagaaaacgaagaaaaagaaaacacaattcaacccc 21824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 36 - 158
Target Start/End: Complemental strand, 102902 - 102780
Alignment:
Q  36 tctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttaggagaaaacga 135  Q
    |||||||||  ||||||| |||| | ||||| ||| | ||||||||  ||  | || ||||| ||||| | ||||||||||||| |||||||||||||||    
T  102902 tctctctcttctttatccactgcaagttagtcctgaacatcacttcagaagtagaactctatctgcttatgatcagtgttttcagcttaggagaaaacga 102803  T
Q  136 agaaaaagctaacataattcaac 158  Q
    |||||||| ||| | ||||||||    
T  102802 agaaaaagttaatacaattcaac 102780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 36 - 161
Target Start/End: Original strand, 19419 - 19543
Alignment:
Q  36 tctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttaggagaaaacga 135  Q
    ||||| ||| ||||||||||||| || |||||||| | ||||| ||  ||  | || ||||| ||||||| || |||||||||| | || ||||||||||    
T  19419 tctctatctattttatccgctgc-atctagttctgaacatcacgtcagaagtagaactctatctgcttctgattagtgttttcagcataagagaaaacga 19517  T
Q  136 agaaaaagctaacataattcaacccc 161  Q
    ||||||||| |||| |||||||||||    
T  19518 agaaaaagccaacacaattcaacccc 19543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 18417 - 18257
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttg 100  Q
    |||||||| ||||||| ||||||  ||| ||||| ||||||| ||||||||||||||| ||||||||||| | ||||||||  ||    ||   ||| ||    
T  18417 aggaacctatataatttctttgtggcttccttctctctctctttgttttatccgctgc-atttagttctgaacatcacttcagaagtggaacattatctg 18319  T
Q  101 cttctaatcagtg-ttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||  | ||||||| |||||| |||||||||||| ||||||||||  |||| |||||||||||    
T  18318 ctcttgatcagtgtttttcagcttaggagaaaaagaagaaaaagaaaacacaattcaacccc 18257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 159
Target Start/End: Original strand, 756 - 817
Alignment:
Q  99 tgcttctaatcagtgtttt-caacttaggagaaaacgaagaaaaagctaacataattcaacc 159  Q
    ||||||| ||||||||||| || |||||||||||| ||||||||||  ||||||||||||||    
T  756 tgcttctgatcagtgtttttcagcttaggagaaaaagaagaaaaagaaaacataattcaacc 817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 24502 - 24664
Alignment:
Q  1 aggaacctgtataa-ttgctttgtatctttcttctttctct--ctctgtttt-atccgctgctatttagttctggaaatcacttcgaaaacaaaattcta 96  Q
    ||||| |||||||| ||||| ||| ||||||||| ||||||  ||||||||| ||||||||| ||| ||||||| | ||||||||  ||  | |  ||||    
T  24502 aggaatctgtataaattgctctgtgtctttcttccttctctatctctgtttttatccgctgcaatt-agttctgaacatcacttcagaagtagagctcta 24600  T
Q  97 tttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    | ||||||| || ||||||||||  ||||||||||| ||||||| ||| ||||||||||||||||    
T  24601 tctgcttctgattagtgttttcag-ttaggagaaaaagaagaaagagcaaacataattcaacccc 24664  T

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Target: scaffold0028; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 161
Target Start/End: Complemental strand, 80623 - 80585
Alignment:
Q  123 taggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||||||||||||||||||||||||||| |||| ||||||    
T  80623 taggagaaaacgaagaaaaagctaacacaatttaacccc 80585  T

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Target: scaffold0009 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 93 - 157
Target Start/End: Complemental strand, 83651 - 83586
Alignment:
Q  93 tctatttgcttctaatcagtgtttt-caacttaggagaaaacgaagaaaaagctaacataattcaa 157  Q
    ||||| ||||||| ||||||||||| || |||||||||||| |||||||||||||||| |||||||    
T  83651 tctatctgcttctgatcagtgtttttcagcttaggagaaaaagaagaaaaagctaacacaattcaa 83586  T

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Target: scaffold0009; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 159
Target Start/End: Complemental strand, 83579 - 83520
Alignment:
Q  101 cttctaatcagtgtttt-caacttaggagaaaacgaagaaaaagctaacataattcaacc 159  Q
    ||||| ||||||||||| || |||||||||||| |||||||||||||||| |||||||||    
T  83579 cttctgatcagtgtttttcagcttaggagaaaaagaagaaaaagctaacacaattcaacc 83520  T

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Target: scaffold0439 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 7530 - 7597
Alignment:
Q  93 tctatttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||||| ||||||| |||||||||||||  ||||||||||| ||||||||||| |||| |||||||||||    
T  7530 tctatctgcttctgatcagtgttttcag-ttaggagaaaaagaagaaaaagccaacacaattcaacccc 7597  T

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Target: scaffold0330 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 492 - 560
Alignment:
Q  93 tctatttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||||| ||||||| ||||||||||||| |||||||||||| ||||||||| | |||  |||||||||||    
T  492 tctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaaaccaactcaattcaacccc 560  T

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Target: scaffold0330; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 377 - 420
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctct 44  Q
    ||||||||||||||||||||||| || |||||||||||||||||    
T  377 aggaacctgtataattgctttgtgtcattcttctttctctctct 420  T

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Target: scaffold0036 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 111421 - 111489
Alignment:
Q  93 tctatttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||||| ||||||| ||||||||||||| ||||||| | || ||||||||||| |||| |||||||||||    
T  111421 tctatctgcttctgatcagtgttttcagcttaggaaagaaagaagaaaaagccaacacaattcaacccc 111489  T

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Target: scaffold0018 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 114 - 158
Target Start/End: Complemental strand, 50553 - 50509
Alignment:
Q  114 ttttcaacttaggagaaaacgaagaaaaagctaacataattcaac 158  Q
    |||||| |||||||||||||||||||||| |||||||||||||||    
T  50553 ttttcagcttaggagaaaacgaagaaaaaactaacataattcaac 50509  T

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Target: scaffold1359 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1359
Description:

Target: scaffold1359; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 162
Target Start/End: Original strand, 33 - 96
Alignment:
Q  99 tgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccct 162  Q
    ||||||| ||||||||||| |  ||||||||||||||||||||||  |||| ||||||||||||    
T  33 tgcttctgatcagtgtttttagattaggagaaaacgaagaaaaagtaaacacaattcaacccct 96  T

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Target: scaffold0324 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 9342 - 9299
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctct 44  Q
    ||||||||||||||||||||||| || |||||||||||||||||    
T  9342 aggaacctgtataattgctttgtgtcattcttctttctctctct 9299  T

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Target: scaffold0081 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 179
Target Start/End: Complemental strand, 13254 - 13196
Alignment:
Q  123 taggagaaaacgaagaaaaagctaacataattcaa--cccctttatgtatttttctcac 179  Q
    ||||||||||||||||||||||||||| |||||||  ||||||| ||| ||||||||||    
T  13254 taggagaaaacgaagaaaaagctaacacaattcaacccccctttttgtgtttttctcac 13196  T

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Target: scaffold0081; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 13429 - 13386
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctct 44  Q
    |||||||||||||||||||||||||||||||||  |||||||||    
T  13429 aggaacctgtataattgctttgtatctttcttccctctctctct 13386  T

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Target: scaffold0040 (Bit Score: 35; Significance: 0.00000000008; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 123 - 161
Target Start/End: Original strand, 2919 - 2957
Alignment:
Q  123 taggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  2919 taggagaaaacgaagaaaaagctaacacaattcaacccc 2957  T

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Target: scaffold0040; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 2785 - 2828
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctct 44  Q
    |||||| |||||||||||||||| |||||||||| |||||||||    
T  2785 aggaacttgtataattgctttgtgtctttcttctctctctctct 2828  T

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Target: scaffold0607 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 5511 - 5455
Alignment:
Q  2 ggaacctgtataa-ttgctttgtatctttcttctttctctctctgttttatccgctgc 58  Q
    ||||||||||||| |||||| || |||||||||| |||||||||||||||||||||||    
T  5511 ggaacctgtataaattgctt-gtgtctttcttctctctctctctgttttatccgctgc 5455  T

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Target: scaffold0498 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 159
Target Start/End: Original strand, 1058 - 1094
Alignment:
Q  123 taggagaaaacgaagaaaaagctaacataattcaacc 159  Q
    ||||||||||||||||||||||||||| |||||||||    
T  1058 taggagaaaacgaagaaaaagctaacacaattcaacc 1094  T

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Target: scaffold0598 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 2506 - 2673
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctctgt---------tttatccgctgctatttag-ttctggaaatcacttcgaaaacaaa 90  Q
    ||||||||||||||||||||| | |||||||||| ||||||||| |         |||||||||||| |||||| ||||| | ||||||||  || |  |    
T  2506 aggaacctgtataattgctttttgtctttcttctctctctctctctctctcagtttttatccgctgc-atttagattctgaacatcacttcagaagctga 2604  T
Q  91 attctatttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    | ||||| ||||||| | |||||  ||||   |||||||||||||||||||||| |||| |||||||||||    
T  2605 actctatctgcttctgaacagtgacttcag--taggagaaaacgaagaaaaagcaaacacaattcaacccc 2673  T

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Target: scaffold0359 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 6415 - 6458
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctct 44  Q
    ||||||||||||||||||||||| || ||||||| |||||||||    
T  6415 aggaacctgtataattgctttgtgtcattcttctctctctctct 6458  T

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Target: scaffold0359; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 6545 - 6613
Alignment:
Q  93 tctatttgcttctaatcagtgttttcaacttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||||| ||||| | || |||||||||  |||||||||||| ||||||||||  |||| |||||||||||    
T  6545 tctatctgcttttgataagtgttttcggcttaggagaaaaagaagaaaaagaaaacacaattcaacccc 6613  T

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Target: scaffold0327 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 7201 - 7244
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctct 44  Q
    ||||||||||||||||| ||||| |||||||||| |||||||||    
T  7201 aggaacctgtataattgttttgtgtctttcttctctctctctct 7244  T

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Target: scaffold0201 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 18586 - 18543
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctct 44  Q
    |||||||  |||||||||||||| ||||||||||||||||||||    
T  18586 aggaaccactataattgctttgtgtctttcttctttctctctct 18543  T

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Target: scaffold0120 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 37471 - 37510
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctct 40  Q
    ||||||||||||||||||||||| |||||||||| |||||    
T  37471 aggaacctgtataattgctttgtgtctttcttctctctct 37510  T

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Target: scaffold0056 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 161
Target Start/End: Original strand, 26499 - 26538
Alignment:
Q  122 ttaggagaaaacgaagaaaaagctaacataattcaacccc 161  Q
    ||||||||||| |||||||||||||||| |||||||||||    
T  26499 ttaggagaaaaagaagaaaaagctaacacaattcaacccc 26538  T

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Target: scaffold0047 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 8014 - 7971
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctct 44  Q
    |||||| |||||||||||||||| |||||||||| |||||||||    
T  8014 aggaacatgtataattgctttgtgtctttcttctctctctctct 7971  T

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Target: scaffold0025 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 73967 - 73924
Alignment:
Q  1 aggaacctgtataattgctttgtatctttcttctttctctctct 44  Q
    |||||||| |||||||||||||| |||||||||| |||||||||    
T  73967 aggaacctatataattgctttgtgtctttcttctctctctctct 73924  T

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Target: scaffold0280 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 161
Target Start/End: Original strand, 3448 - 3571
Alignment:
Q  36 tctctctctgttttatccgctgctatttagttctggaaatcacttcgaaaacaaaattctatttgcttctaatcagtgttttcaacttaggagaaaacga 135  Q
    ||||||||| ||||||||||||| ||| ||||||| | ||| ||||  ||  | || ||||| ||||||| ||| || ||||||  ||||||||||| ||    
T  3448 tctctctctattttatccgctgcaatt-agttctgaacatctcttcagaagtagaactctatctgcttctgatctgtattttcag-ttaggagaaaaaga 3545  T
Q  136 agaaaaagctaacataattcaacccc 161  Q
    ||||||||  |||| |||||||||||    
T  3546 agaaaaagaaaacacaattcaacccc 3571  T

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Target: scaffold1281 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1281
Description:

Target: scaffold1281; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 44
Target Start/End: Original strand, 2117 - 2153
Alignment:
Q  8 tgtataattgctttgtatctttcttctttctctctct 44  Q
    |||||||||||||||| |||||||||| |||||||||    
T  2117 tgtataattgctttgtgtctttcttctctctctctct 2153  T

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Target: scaffold0249 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 18491 - 18551
Alignment:
Q  1 aggaacctgtataa-ttgctttgtatctttcttctttctctctctgttttatccgctgctattt 63  Q
    |||||||||||||| |||||| || ||||||||||  |||||||||||||||||||||| ||||    
T  18491 aggaacctgtataaattgctt-gtgtctttcttct--ctctctctgttttatccgctgcaattt 18551  T

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Target: scaffold0064 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 44587 - 44631
Alignment:
Q  1 aggaacctgtataa-ttgctttgtatctttcttctttctctctct 44  Q
    |||||||||||||| ||||||||| |||||||||| |||||||||    
T  44587 aggaacctgtataaattgctttgtgtctttcttctctctctctct 44631  T

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Target: scaffold0011 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 58947 - 58911
Alignment:
Q  4 aacctgtataattgctttgtatctttcttctttctct 40  Q
    |||||||||||||| ||||| ||||||||||||||||    
T  58947 aacctgtataattgatttgtgtctttcttctttctct 58911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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