View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2018_high_76 (Length: 236)
Name: NF2018_high_76
Description: NF2018
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2018_high_76 |
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Alignment Details
Target: chr1 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 39029005 - 39028783
Alignment:
| Q |
1 |
tggtggtagttggataagcagttctagtaaaccaagaaatgaattaagatcacaagaaccaaccaatgatgaaagtgtgtgtctaagtgtgggacaatgc |
100 |
Q |
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|||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39029005 |
tggtggtagttggataagcaattctagtaaaccaagaaatgaattgagatcacaagaaccaaccaatgatgaaagtgtgtgtctaagtgtgggacaatgc |
39028906 |
T |
|
| Q |
101 |
tggaagggaacacaaaaatcatatgttaaaatgggaagaaaaggttctgttcatcaaggtgaaatagaagaatctggaggagaatcaagcaatcctgaac |
200 |
Q |
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|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39028905 |
tggaagggaacacaaaaatcctatgttaaaatgggaagaaaaggttctgttcatcaaggtgaaatagaagaatctggaggagaatcaagcaatcctgaac |
39028806 |
T |
|
| Q |
201 |
cattaagtggaaagaagtttttg |
223 |
Q |
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||||||||||||||||||||||| |
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| T |
39028805 |
cattaagtggaaagaagtttttg |
39028783 |
T |
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