View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2018_low_23 (Length: 435)
Name: NF2018_low_23
Description: NF2018
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2018_low_23 |
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Alignment Details
Target: chr1 (Bit Score: 291; Significance: 1e-163; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 14 - 376
Target Start/End: Original strand, 7452325 - 7452685
Alignment:
| Q |
14 |
gacatcatcctaccatataggttttaatttttaatctctaaccaccggaatattttgatctaccacccaccccaaacctatttcactagtttctttaatt |
113 |
Q |
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| T |
7452325 |
gacatcatactaccatataggttttaatttttaatctctaaccaccggaatattttgatctaccacccaccccaaacctatttcactagtttctttaatt |
7452424 |
T |
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| Q |
114 |
gttgacaagagcattgcatttgcataaccttnnnnnnnnttgaatacttcagttaatgaaatagagtccaacacaaatttaaattgatgtcaattactta |
213 |
Q |
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| T |
7452425 |
gttgacaagagcattgcatttgcataaccttaaaaaaaattgaatacttcagttaatgaaatagagtccaacacaaatttaaattgatgtcaattactta |
7452524 |
T |
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| Q |
214 |
gtaacaacaattaggacacaaatatagggagtatgcatcacttgtcacatctaacatatatggttgaagtaaaatgaannnnnnnnnnnnnatgtcaatt |
313 |
Q |
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| T |
7452525 |
gtaacaacaattaggacacaaatatagggagtatgcatcacttgtcacatctaacatatatggttgaagtaaaatgaa--acacacacacaatgtcaatt |
7452622 |
T |
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| Q |
314 |
caacatgcttgtctagttgtctacctaggaaaagcaagcaatgtaaaacactgattttgatcc |
376 |
Q |
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| T |
7452623 |
caacatgcttgtctagttgtctacctaggaaaagcaagcaatgtaaaacactgattttgatcc |
7452685 |
T |
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