View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2018_low_84 (Length: 234)
Name: NF2018_low_84
Description: NF2018
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2018_low_84 |
 |  |
|
Alignment Details
Target: chr5 (Bit Score: 181; Significance: 6e-98; HSPs: 13)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 30242878 - 30242658
Alignment:
| Q |
1 |
aactctgtcaagctattccctttctctaaactaacaatgtacacacttaatgttcttagacaagatatttttccaatgttaggaaacatgagagacaaag |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| |
|
|
| T |
30242878 |
aactctgtcaagctattccctttctctaaactaacaatatacacacttaatgttcttagacaagttaattttccaatgttaggaaacatgagagacaaag |
30242779 |
T |
 |
| Q |
101 |
accgacattcttcaatgactatatgcctaagattttgtaagcaagccaagtgttttgggagagaactcagattaccacagtcttttattttcaagatttc |
200 |
Q |
| |
|
|||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| |||| ||| | |||||||||||||||||| |
|
|
| T |
30242778 |
accgacattctttaatgactatatgtctaagattttgtaagcaagccaagtgttttgggagacaactcagtttacgacaatgttttattttcaagatttc |
30242679 |
T |
 |
| Q |
201 |
cagcttttttaggttgtaaat |
221 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
30242678 |
cagcttttttaggttgtaaat |
30242658 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 177; E-Value: 1e-95
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 30059966 - 30060186
Alignment:
| Q |
1 |
aactctgtcaagctattccctttctctaaactaacaatgtacacacttaatgttcttagacaagatatttttccaatgttaggaaacatgagagacaaag |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| |
|
|
| T |
30059966 |
aactctgtcaagctattccctttctctaaactaacaatgtacacacttaatgttcttagacaagttaattttccaatgttaggaaacatgagagacaaag |
30060065 |
T |
 |
| Q |
101 |
accgacattcttcaatgactatatgcctaagattttgtaagcaagccaagtgttttgggagagaactcagattaccacagtcttttattttcaagatttc |
200 |
Q |
| |
|
|||||||| |||||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||| |||| |||||||||||||||||||||||| |
|
|
| T |
30060066 |
accgacatacttcaatgactatatgtctaagattttgtaagcaagccaagcgttttgggagacaactcagtttacgacagtcttttattttcaagatttc |
30060165 |
T |
 |
| Q |
201 |
cagcttttttaggttgtaaat |
221 |
Q |
| |
|
||| |||| || ||||||||| |
|
|
| T |
30060166 |
cagtttttgtaagttgtaaat |
30060186 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 177; E-Value: 1e-95
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 30483001 - 30483221
Alignment:
| Q |
1 |
aactctgtcaagctattccctttctctaaactaacaatgtacacacttaatgttcttagacaagatatttttccaatgttaggaaacatgagagacaaag |
100 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||| |
|
|
| T |
30483001 |
aactctgtcaagctattccctttctctacactaacaatgtacacacttaatgttcttagacaagttaattttccaatgttaggaaacatttgagacaaag |
30483100 |
T |
 |
| Q |
101 |
accgacattcttcaatgactatatgcctaagattttgtaagcaagccaagtgttttgggagagaactcagattaccacagtcttttattttcaagatttc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| |||||||||||||||||||||||| |
|
|
| T |
30483101 |
accgacattcttcaatgactatatgcctaagattttgtaagcaagccaagcgttttgggagacaactcagattacgacagtcttttattttcaagatttc |
30483200 |
T |
 |
| Q |
201 |
cagcttttttaggttgtaaat |
221 |
Q |
| |
|
||| |||| || ||||||||| |
|
|
| T |
30483201 |
cagtttttgtaagttgtaaat |
30483221 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 30339031 - 30338811
Alignment:
| Q |
1 |
aactctgtcaagctattccctttctctaaactaacaatgtacacacttaatgttcttagacaagatatttttccaatgttaggaaacatgagagacaaag |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| |
|
|
| T |
30339031 |
aactctgtcaagctattccctttctctaaactaacaatgtacacacttaatgttcttagacaagataattttccaatgttaggaaacattagagacaaag |
30338932 |
T |
 |
| Q |
101 |
accgacattcttcaatgactatatgcctaagattttgtaagcaagccaagtgttttgggagagaactcagattaccacagtcttttattttcaagatttc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||| ||| |||| |||||||||||||||||| |
|
|
| T |
30338931 |
accgacattcttcaatgactatatgcctaagattttgtaagcaagccaagcgttttggaagacaactcagtttatcacaacgttttattttcaagatttc |
30338832 |
T |
 |
| Q |
201 |
cagcttttttaggttgtaaat |
221 |
Q |
| |
|
||| |||| || ||||||||| |
|
|
| T |
30338831 |
cagtttttgtaagttgtaaat |
30338811 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 29852908 - 29853128
Alignment:
| Q |
1 |
aactctgtcaagctattccctttctctaaactaacaatgtacacacttaatgttcttagacaagatatttttccaatgttaggaaacatgagagacaaag |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||||| |
|
|
| T |
29852908 |
aactctgtcaagctattccctttctctaaactaacaatgtacatgcttaatgttcttagacaagataatttgccaatgttaggaaacatgagagacaaag |
29853007 |
T |
 |
| Q |
101 |
accgacattcttcaatgactatatgcctaagattttgtaagcaagccaagtgttttgggagagaactcagattaccacagtcttttattttcaagatttc |
200 |
Q |
| |
|
| |||||| ||| |||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||| | ||| ||||||||||||||||| ||||| |
|
|
| T |
29853008 |
atcgacatcctttaatgactatatgtctaagattttgtaagcaagccaagtgtttcgggagacaactcagttcaccgcagtcttttattttcaatatttc |
29853107 |
T |
 |
| Q |
201 |
cagcttttttaggttgtaaat |
221 |
Q |
| |
|
||| |||| || ||||||||| |
|
|
| T |
29853108 |
cagtttttgtaagttgtaaat |
29853128 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 30749240 - 30749460
Alignment:
| Q |
1 |
aactctgtcaagctattccctttctctaaactaacaatgtacacacttaatgttcttagacaagatatttttccaatgttaggaaacatgagagacaaag |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| |
|
|
| T |
30749240 |
aactctgtcaagctattccctttctctaaactaacaatgtacacacttaatgttcttagacaagttaattttccaatgttaggaaacatgagagacaaag |
30749339 |
T |
 |
| Q |
101 |
accgacattcttcaatgactatatgcctaagattttgtaagcaagccaagtgttttgggagagaactcagattaccacagtcttttattttcaagatttc |
200 |
Q |
| |
|
| |||| |||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||| |||| |||| |||||||||||||||||| |
|
|
| T |
30749340 |
atttacatctgtcaatgactatatgtctaagattttgtaagcaagccaagcgttttgggagacaactcagtttacgacagcgttttattttcaagatttc |
30749439 |
T |
 |
| Q |
201 |
cagcttttttaggttgtaaat |
221 |
Q |
| |
|
||| |||| || ||||||||| |
|
|
| T |
30749440 |
cagtttttgtaagttgtaaat |
30749460 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 30713928 - 30713708
Alignment:
| Q |
1 |
aactctgtcaagctattccctttctctaaactaacaatgtacacacttaatgttcttagacaagatatttttccaatgttaggaaacatgagagacaaag |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||| |
|
|
| T |
30713928 |
aactctgtcaagctattccctttctctaaactaacaatgtacacacttaatgttcttagacaagttaattttccaatgttaggaaacattcgagacaaag |
30713829 |
T |
 |
| Q |
101 |
accgacattcttcaatgactatatgcctaagattttgtaagcaagccaagtgttttgggagagaactcagattaccacagtcttttattttcaagatttc |
200 |
Q |
| |
|
| ||||||||||||||||||||||| |||||||||||||| ||||||||| |||| || || |||| || ||| ||||| |||||||||||||||||| |
|
|
| T |
30713828 |
atcgacattcttcaatgactatatgtctaagattttgtaaacaagccaagcgtttcggaaggcaactaagtttattacagtgttttattttcaagatttc |
30713729 |
T |
 |
| Q |
201 |
cagcttttttaggttgtaaat |
221 |
Q |
| |
|
||| |||| || ||||||||| |
|
|
| T |
30713728 |
cagtttttgtaagttgtaaat |
30713708 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 29871783 - 29872003
Alignment:
| Q |
1 |
aactctgtcaagctattccctttctctaaactaacaatgtacacacttaatgttcttagacaagatatttttccaatgttaggaaacatgagagacaaag |
100 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||||||||| |||||||| |
|
|
| T |
29871783 |
aactctgtcaaactattccctttctctaaactaacaatgtacacacttaatgttcttaaacaagttaattttccaatgttaggaaacatactagacaaag |
29871882 |
T |
 |
| Q |
101 |
accgacattcttcaatgactatatgcctaagattttgtaagcaagccaagtgttttgggagagaactcagattaccacagtcttttattttcaagatttc |
200 |
Q |
| |
|
| ||||||||||||||||||||||| |||||||||||||| ||||||||| |||| || || | || || ||| |||||| |||||||||||||||||| |
|
|
| T |
29871883 |
atcgacattcttcaatgactatatgtctaagattttgtaaacaagccaagcgtttcggaagccagctaagtttatcacagtattttattttcaagatttc |
29871982 |
T |
 |
| Q |
201 |
cagcttttttaggttgtaaat |
221 |
Q |
| |
|
|||||||||||| |||||||| |
|
|
| T |
29871983 |
cagcttttttagattgtaaat |
29872003 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 30677674 - 30677454
Alignment:
| Q |
1 |
aactctgtcaagctattccctttctctaaactaacaatgtacacacttaatgttcttagacaagatatttttccaatgttaggaaacatgagagacaaag |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||| ||||||||||||||| ||||||||| |
|
|
| T |
30677674 |
aactctgtcaagctattccctttctctaaactaacaatgtacacacttaatgttcttaaacaagttaattttctaatgttaggaaacatacgagacaaag |
30677575 |
T |
 |
| Q |
101 |
accgacattcttcaatgactatatgcctaagattttgtaagcaagccaagtgttttgggagagaactcagattaccacagtcttttattttcaagatttc |
200 |
Q |
| |
|
| ||| | ||||||||||||||| |||||||||||||| ||||||||| ||||||| || | || || ||| |||||| |||||||||||||||||| |
|
|
| T |
30677574 |
attcacaatattcaatgactatatgtctaagattttgtaaacaagccaagcgttttggaagccagctaagtttatcacagtgttttattttcaagatttc |
30677475 |
T |
 |
| Q |
201 |
cagcttttttaggttgtaaat |
221 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
30677474 |
cagcttttttaggttgtaaat |
30677454 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 30435419 - 30435639
Alignment:
| Q |
1 |
aactctgtcaagctattccctttctctaaactaacaatgtacacacttaatgttcttagacaagatatttttccaatgttaggaaacatgagagacaaag |
100 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| |||||||| || | |||| |
|
|
| T |
30435419 |
aactctgtcaagctatttcctttctctaaactaacaatgtacacacttaatgttcttagacaagttaattttccaatgttgggaaacattcgaaataaag |
30435518 |
T |
 |
| Q |
101 |
accgacattcttcaatgactatatgcctaagattttgtaagcaagccaagtgttttgggagagaactcagattaccacagtcttttattttcaagatttc |
200 |
Q |
| |
|
| | |||| |||||||||||||||| |||||||||||||||||| ||||| ||||||||||| ||||||| | || ||| | |||||||||||||||||| |
|
|
| T |
30435519 |
atccacatccttcaatgactatatgtctaagattttgtaagcaaaccaagcgttttgggagacaactcagttcacgacaatattttattttcaagatttc |
30435618 |
T |
 |
| Q |
201 |
cagcttttttaggttgtaaat |
221 |
Q |
| |
|
||| |||| || ||||||||| |
|
|
| T |
30435619 |
cagtttttgtaagttgtaaat |
30435639 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 30399674 - 30399894
Alignment:
| Q |
1 |
aactctgtcaagctattccctttctctaaactaacaatgtacacacttaatgttcttagacaagatatttttccaatgttaggaaacatgagagacaaag |
100 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| || || ||||||||||||||||||||| ||||||||| |
|
|
| T |
30399674 |
aactctgacaagctattccctttctctaaactaacaatgtacacacttaatgtttttagactagttaattttccaatgttaggaaacattcgagacaaag |
30399773 |
T |
 |
| Q |
101 |
accgacattcttcaatgactatatgcctaagattttgtaagcaagccaagtgttttgggagagaactcagattaccacagtcttttattttcaagatttc |
200 |
Q |
| |
|
| ||| | |||||| |||||||| ||||||||||||||| |||||||| ||||||||||| || |||| | |||||| | ||||||||||||| |||| |
|
|
| T |
30399774 |
atatacaatattcaataactatatgtctaagattttgtaagaaagccaagcgttttgggagacaaatcagttcaccacaatgttttattttcaaggtttc |
30399873 |
T |
 |
| Q |
201 |
cagcttttttaggttgtaaat |
221 |
Q |
| |
|
||| |||| || ||||||||| |
|
|
| T |
30399874 |
cagtttttgtaagttgtaaat |
30399894 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 30206122 - 30206342
Alignment:
| Q |
1 |
aactctgtcaagctattccctttctctaaactaacaatgtacacacttaatgttcttagacaagatatttttccaatgttaggaaacatgagagacaaag |
100 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| | || ||||||||||| ||||||||| || |||| | |
|
|
| T |
30206122 |
aactctgccaagctattccctttctctaaactaacaatgtacacacttaatgttcttagacaggttaattttccaatgtatggaaacatgtgaaacaatg |
30206221 |
T |
 |
| Q |
101 |
accgacattcttcaatgactatatgcctaagattttgtaagcaagccaagtgttttgggagagaactcagattaccacagtcttttattttcaagatttc |
200 |
Q |
| |
|
| | || |||| |||||| | ||| || ||||| ||||| ||||||||| ||| || ||| | || || || ||| |||||||||||||||||||| |
|
|
| T |
30206222 |
aatggcaatctttaatgacaagatgtctgagattctgtaaacaagccaagcctttcggaagacagctaagtttttgacaatcttttattttcaagatttc |
30206321 |
T |
 |
| Q |
201 |
cagcttttttaggttgtaaat |
221 |
Q |
| |
|
||| |||| || ||||||||| |
|
|
| T |
30206322 |
cagtttttgtaagttgtaaat |
30206342 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 88
Target Start/End: Complemental strand, 17418655 - 17418576
Alignment:
| Q |
9 |
caagctattccctttctctaaactaacaatgtacacacttaatgttcttagacaagatatttttccaatgttaggaaaca |
88 |
Q |
| |
|
||||||||| ||| ||||| ||||||||||||| | ||||||||||||||| ||| || |||||| ||| |||||||| |
|
|
| T |
17418655 |
caagctattacctctctctgaactaacaatgtataagcttaatgttcttagagaagttaattttccgatgcaaggaaaca |
17418576 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 149; Significance: 8e-79; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 26706941 - 26707161
Alignment:
| Q |
1 |
aactctgtcaagctattccctttctctaaactaacaatgtacacacttaatgttcttagacaagatatttttccaatgttaggaaacatgagagacaaag |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| |||||||||| ||||||||| |
|
|
| T |
26706941 |
aactctgtcaagctattccctttctctaaactaacaatgtacacacttaatgttcttagacaggataattttccaatgctaggaaacattcgagacaaag |
26707040 |
T |
 |
| Q |
101 |
accgacattcttcaatgactatatgcctaagattttgtaagcaagccaagtgttttgggagagaactcagattaccacagtcttttattttcaagatttc |
200 |
Q |
| |
|
| | |||| |||||||||||||||| |||||||||||||| |||| ||||||||| || ||| ||||||||||| |||| |||||||||||||||||||| |
|
|
| T |
26707041 |
atccacatccttcaatgactatatgtctaagattttgtaaacaagtcaagtgtttaggaagacaactcagattatcacaatcttttattttcaagatttc |
26707140 |
T |
 |
| Q |
201 |
cagcttttttaggttgtaaat |
221 |
Q |
| |
|
||| ||||||| ||||||||| |
|
|
| T |
26707141 |
cagtttttttaagttgtaaat |
26707161 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 130; Significance: 2e-67; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 20297097 - 20296896
Alignment:
| Q |
1 |
aactctgtcaagctattccctttctctaaactaacaatgtacacacttaatgttcttagacaagatatttttccaatgttaggaaacatgagagacaaag |
100 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||| |
|
|
| T |
20297097 |
aactctgtcaagctattccctttctttaaactaacaatgtacacacttaatgttcttagacaagataattttccaatgctaggaaacattcgagacaaag |
20296998 |
T |
 |
| Q |
101 |
accgacattcttcaatgactatatgcctaagattttgtaagcaagccaagtgttttgggagagaactcagattaccacagtcttttattttcaagatttc |
200 |
Q |
| |
|
||| ||| ||||||||||||||||| ||||||||||||| ||| ||||||||||| || ||| ||||||||||| ||||| | ||||||||||| |||| |
|
|
| T |
20296997 |
accaacaatcttcaatgactatatgtctaagattttgtaggcaggccaagtgtttcggaagacaactcagattatcacagcgtattattttcaaggtttc |
20296898 |
T |
 |
| Q |
201 |
ca |
202 |
Q |
| |
|
|| |
|
|
| T |
20296897 |
ca |
20296896 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 62; Significance: 6e-27; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 7099021 - 7099190
Alignment:
| Q |
1 |
aactctgtcaagctattccctttctctaaactaacaatgtacacacttaatgttcttagacaagatatttttccaatgttaggaaacatgagagacaaag |
100 |
Q |
| |
|
||||||| ||||||| |||||||| ||| ||||||| || |||||||| ||||||| ||||||| ||||||||||| |||||||||| ||||||| | |
|
|
| T |
7099021 |
aactctgctaagctatgtcctttctcgaaattaacaatataaacacttaaggttcttaagcaagataattttccaatgtgaggaaacatgcgagacaatg |
7099120 |
T |
 |
| Q |
101 |
accgacattcttcaatgactatatgcctaagattttgtaagcaagccaagtgttttgggagagaactcag |
170 |
Q |
| |
|
| ||| ||||||||| || ||| ||||||||||||||||||| |||||||| ||| ||| ||||||| |
|
|
| T |
7099121 |
aattacaaccttcaatgattaaatgtctaagattttgtaagcaagacaagtgttctggaagacaactcag |
7099190 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 34 - 154
Target Start/End: Complemental strand, 7582192 - 7582072
Alignment:
| Q |
34 |
acaatgtacacacttaatgttcttagacaagatatttttccaatgttaggaaacatgagagacaaagaccgacattcttcaatgactatatgcctaagat |
133 |
Q |
| |
|
||||| || |||||||||||||||| ||||||| |||||||| | | |||||||| ||||||| | |||| ||||||||||||| ||| ||||||| |
|
|
| T |
7582192 |
acaatataaacacttaatgttcttaagcaagataattttccaacatgacgaaacatgcgagacaacaaatgacaatcttcaatgactaaatgtctaagat |
7582093 |
T |
 |
| Q |
134 |
tttgtaagcaagccaagtgtt |
154 |
Q |
| |
|
|||||||||||| |||||||| |
|
|
| T |
7582092 |
tttgtaagcaagacaagtgtt |
7582072 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 114 - 221
Target Start/End: Complemental strand, 25294262 - 25294155
Alignment:
| Q |
114 |
aatgactatatgcctaagattttgtaagcaagccaagtgttttgggagagaactcagattaccacagtcttttattttcaagatttccagcttttttagg |
213 |
Q |
| |
|
||||| || ||| ||||||||||||||||||||||| |||||||| ||| |||||| ||| || | | ||||||||| ||||||||||| |||||| | |
|
|
| T |
25294262 |
aatgattagatgtctaagattttgtaagcaagccaaatgttttggaagaccactcagtttatcataatattttatttttaagatttccagtatttttaag |
25294163 |
T |
 |
| Q |
214 |
ttgtaaat |
221 |
Q |
| |
|
|||||||| |
|
|
| T |
25294162 |
ttgtaaat |
25294155 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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