View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20193_low_15 (Length: 251)
Name: NF20193_low_15
Description: NF20193
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20193_low_15 |
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Alignment Details
Target: chr5 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 30 - 242
Target Start/End: Original strand, 14327689 - 14327901
Alignment:
| Q |
30 |
gcacttagaaagaatttaaggaaaaaagaagtttggtttaggttaagtggaaaagagcttgtttgagaagtttgtagaaaagtgaggggacagaaggaaa |
129 |
Q |
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| T |
14327689 |
gcacttagaaagaatttaaggaaaaaagaagtttggtttaggttaagtggaaaagagcttgtttgagaagtttgtagaaaagtgaggggacagaaggaaa |
14327788 |
T |
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| Q |
130 |
gtaggttgaaagagtttgaggacttttaaatatatagggaattttgatgagcgtgtaaaaatgattgtagtgnnnnnnnagatatagaaatggaaattac |
229 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
14327789 |
gtaggttgaaagagtttgaggacttttaaatatatagggaattttgatgagcgtgtaaaaatgattgtagtgtttttttagatatagaaatggaaattac |
14327888 |
T |
|
| Q |
230 |
tttcaagaataat |
242 |
Q |
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||||||||||||| |
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| T |
14327889 |
tttcaagaataat |
14327901 |
T |
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