View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF20194_high_1 (Length: 1334)
Name: NF20194_high_1
Description: NF20194
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20194_high_1 |
 |  |
|
Alignment Details
Target: chr6 (Bit Score: 1161; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 1161; E-Value: 0
Query Start/End: Original strand, 18 - 1328
Target Start/End: Original strand, 6184654 - 6185960
Alignment:
| Q |
18 |
caatgtcacaccaataattcccaaaaacaacttgctcttgaatattccttcaaagacattctttttctccaatttccttgcattaaactcattaaacact |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6184654 |
caatgtcacaccaataattcccaaaaacaacttgctcttgaatattccttcaaagacattctttttctccaatttccttgcattaaactcattaaacact |
6184753 |
T |
 |
| Q |
118 |
tgacatagaacaaatgtattaaaaatcaatgtgtcatttacctttgatgtcacaccaaaaatatcctcacctttgaattgaagagttaacaaaattacta |
217 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
6184754 |
tgacatagaacaaatgtattaaaaatcaatgtgtcatttacctttgatgtcacaccaaaaatatcctcacctttgaattgaagagttaacaaaattatta |
6184853 |
T |
 |
| Q |
218 |
tttggtacaaagcttgtgacacaagattcctccacataatgttagtaataagaggctttgttctaccaactggtttttcatccattaattccttagtagg |
317 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6184854 |
tttggtacaaagcttgtgacacaagattcctccacataatgttagtaataagaggctttgttctaccaactggtttttcatccattaattccttagtagg |
6184953 |
T |
 |
| Q |
318 |
tttttcagttgcaagagccaaagcacctaatgtatccataattaaattcacccataataattgaactgctgttaatggtacttcgccggctgaaaccgcg |
417 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
6184954 |
tttttcagttgcaagagccaaagcacctaatgtatccataatcaaattcacccataataattgaactgctgttaatggtacttcaccggctgaaaccgcc |
6185053 |
T |
 |
| Q |
418 |
gctacgaaattgataacaagtgctgccacattcactgttagttgaaattgaatgaatttttgaatgttgttgtaaacacatcttccccagtttaaaactg |
517 |
Q |
| |
|
|| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
6185054 |
gcaacgaaattgataacaagggctgccacattcactgttagttgaaattgaatgaatttttgaatgttgttgtaaacacatcttccccagtttaacactg |
6185153 |
T |
 |
| Q |
518 |
ttactatagatgcaaaattgtcatctaatataacaatatctgaactctcttttgctacttctgtaccttgaattcccattgaaagaccgatatcggcttc |
617 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
6185154 |
ttacgatagatgcaaaattgtcatctaatataacaatatctgaactctcttttgcaacttcagtaccttgaattcccattgaaagtccgatatcggcttc |
6185253 |
T |
 |
| Q |
618 |
tttcaatgccggtgcatcgtttgttccatctcctgttacagcaactacatgacctttttgttttaagcattgaaccattagaagtttgtcaaatggagat |
717 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6185254 |
tttcaatgccggtgcatcgtttgttccatctcctgttacagcaactacatgacctttttgttttaagcattgaaccattagaagtttgtcaaatggagat |
6185353 |
T |
 |
| Q |
718 |
gatcttgccatcacacatattttttcaaccttttctaatctctcttcgtgcgtaaagttgcgaaactgttcgccttcaaccaccgtttcatctgtgtcct |
817 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| |
|
|
| T |
6185354 |
gatcttgccatcacacatattttttcaaccttttctaatctctcttcgtgcgtaaagttgcgaaattgttcgccttcaaccaccgtttcatctatgtcct |
6185453 |
T |
 |
| Q |
818 |
gattaggttgaagaattccacattcaaatgctatagcttttgcagtgaaaacattgtcacctattataatcagaaataaagtttgccatcattttcgtat |
917 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| | |||||||||| | | |
|
|
| T |
6185454 |
gattaggttgaagaattccacattcaaatgctatagctttcgcagtgaaaacattgtcacctattataatcagagataaagttcggcatcattttcatgt |
6185553 |
T |
 |
| Q |
918 |
agactcgtatgtataaatagaggattttgtagtcaatatcgatcgaaagattaagttactgataaatgagatattttagcaatacctgtgatcattttga |
1017 |
Q |
| |
|
||||| ||||||||||||||| |||||| || || |||| || |||||| |||||||| |||||||||||||| ||| ||||||||| |||||||||| |
|
|
| T |
6185554 |
agacttgtatgtataaatagacgattttatattcgatat---tc-aaagatcaagttactcataaatgagatattatagtaatacctgtaatcattttga |
6185649 |
T |
 |
| Q |
1018 |
cattcacaccagcatgttggcaagcttccaccgctgtcttcacccctgggcgacatggatccttaatgccgacaagtcctaacaatgttaaatcattctc |
1117 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6185650 |
cattcacaccggcatgttggcaagcttccaccgctgtcttcacccctgggcgacatggatccttaatgccgacaagtcctaacaatgttaaatcattctc |
6185749 |
T |
 |
| Q |
1118 |
ttttaccaccatcttggtgttgtctccttcatgtcctagcttttcgtctgagacttctgtacacgctaaagcgatgcaacgaagactactagctgccata |
1217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6185750 |
ttttaccaccatcttggtgttgtctccttcatgtcctagcttttcgtctgagacttctgtacacgctaaagcgatgcaacgaagactactagctgccata |
6185849 |
T |
 |
| Q |
1218 |
ccttgaataatgctttcgaatttcagcatagattcattgtcaagatctttcaaaattccataaccatcatagtatcttgaacacattcttagtaccatct |
1317 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6185850 |
ccttgaataatgctttcgaatttcagcatagattcattgtcaagatctttcaaaattccataaccatcatagtatcttgaacacattcttagtaccatct |
6185949 |
T |
 |
| Q |
1318 |
ctgctcctcct |
1328 |
Q |
| |
|
| ||| ||||| |
|
|
| T |
6185950 |
cggctgctcct |
6185960 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 626; Significance: 0; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 626; E-Value: 0
Query Start/End: Original strand, 18 - 879
Target Start/End: Original strand, 4235530 - 4236391
Alignment:
| Q |
18 |
caatgtcacaccaataattcccaaaaacaacttgctcttgaatattccttcaaagacattctttttctccaatttccttgcattaaactcattaaacact |
117 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||| ||||| |||||||| |||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
4235530 |
caatgtcacaccaacaattcccaaaaacaacttgctcttaaatatcccttcaaacacattcttcttctccaatttccttgcattaaactcattaaacact |
4235629 |
T |
 |
| Q |
118 |
tgacatagaacaaatgtattaaaaatcaatgtgtcatttacctttgatgtcacaccaaaaatatcctcacctttgaattgaagagttaacaaaattacta |
217 |
Q |
| |
|
||||| |||||||||||||| || || ||||||||||||||||| || ||||||||||||||| ||||||||| || ||||||||||| |||||||||| |
|
|
| T |
4235630 |
tgacaaagaacaaatgtattgaatattaatgtgtcatttaccttcgaagtcacaccaaaaatactctcacctttaaactgaagagttaataaaattacta |
4235729 |
T |
 |
| Q |
218 |
tttggtacaaagcttgtgacacaagattcctccacataatgttagtaataagaggctttgttctaccaactggtttttcatccattaattccttagtagg |
317 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| |||| || ||||||||| ||||||||||| |
|
|
| T |
4235730 |
tttggtacaaagcttgtgacaaaagattcctccacataatgttagttataagaggctttgttctaccaacaggttctttatccattaaatccttagtagg |
4235829 |
T |
 |
| Q |
318 |
tttttcagttgcaagagccaaagcacctaatgtatccataattaaattcacccataataattgaactgctgttaatggtacttcgccggctgaaaccgcg |
417 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| || |||||||| ||||||||||| |
|
|
| T |
4235830 |
tttttcagttgcaagagccaatgcacctaatgtatccataatcaaattcacccataataattgaactgctgttaacggaacttcgcctgctgaaaccgcc |
4235929 |
T |
 |
| Q |
418 |
gctacgaaattgataacaagtgctgccacattcactgttagttgaaattgaatgaatttttgaatgttgttgtaaacacatcttccccagtttaaaactg |
517 |
Q |
| |
|
|| || ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| |
|
|
| T |
4235930 |
gcgacaaaatttataacaagtgctgccacattcactgttaattgaaattgaatgaatttttgaatgttgttgtaaacacatcttccccaatttataactg |
4236029 |
T |
 |
| Q |
518 |
ttactatagatgcaaaattgtcatctaatataacaatatctgaactctcttttgctacttctgtaccttgaattcccattgaaagaccgatatcggcttc |
617 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| ||||| |
|
|
| T |
4236030 |
ttacaatagatgcaaaattgtcatctaatataacaatatctgaactctcttttgctacttcagtaccttgaattcccattgaaagtccaatatcagcttc |
4236129 |
T |
 |
| Q |
618 |
tttcaatgccggtgcatcgtttgttccatctcctgttacagcaactacatgacctttttgttttaagcattgaaccattagaagtttgtcaaatggagat |
717 |
Q |
| |
|
||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| |
|
|
| T |
4236130 |
tttcaatgctggtgcatcgtttgttccgtctccggttacagcaactacatgacctttttgttttaagcattgtaccattagaagtttatcaaatggagaa |
4236229 |
T |
 |
| Q |
718 |
gatcttgccatcacacatattttttcaaccttttctaatctctcttcgtgcgtaaagttgcgaaactgttcgccttcaaccaccgtttcatctgtgtcct |
817 |
Q |
| |
|
||||||||||||||| | ||||| ||||| || | || ||||||||||| || ||||| ||||| ||||||||||||||||| |||||||| ||||||| |
|
|
| T |
4236230 |
gatcttgccatcacagagattttctcaactttcgccaacctctcttcgtgtgtgaagttacgaaattgttcgccttcaaccactgtttcatccgtgtcct |
4236329 |
T |
 |
| Q |
818 |
gattaggttgaagaattccacattcaaatgctatagcttttgcagtgaaaacattgtcacct |
879 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4236330 |
gattaggttgaagaattccacattcaaatgctatagcttttgcagtgaaaacattgtcacct |
4236391 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 978 - 1328
Target Start/End: Original strand, 4236517 - 4236867
Alignment:
| Q |
978 |
gataaatgagatattttagcaatacctgtgatcattttgacattcacaccagcatgttggcaagcttccaccgctgtcttcacccctgggcgacatggat |
1077 |
Q |
| |
|
||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||| |
|
|
| T |
4236517 |
gataaataagatattttagtaatacctgtaatcattttgacattcacaccagcatgttggcaagcttccactgtcgtcttcacccccgggcgacatggat |
4236616 |
T |
 |
| Q |
1078 |
ccttaatgccgacaagtcctaacaatgttaaatcattctcttttaccaccatcttggtgttgtctccttcatgtcctagcttttcgtctgagacttctgt |
1177 |
Q |
| |
|
|||||||||| ||||||||||||||||||||| |||| |||||||||||||||||| | | ||||||||| | | |||| |||||||| |||| ||| |
|
|
| T |
4236617 |
ccttaatgcctacaagtcctaacaatgttaaaccattgtcttttaccaccatcttgttcatatctccttcaacttcaagctcttcgtctgtaacttttgt |
4236716 |
T |
 |
| Q |
1178 |
acacgctaaagcgatgcaacgaagactactagctgccataccttgaataatgctttcgaatttcagcatagattcattgtcaagatctttcaaaattcca |
1277 |
Q |
| |
|
| ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||| | ||||||||||||||||||| |||||||| |
|
|
| T |
4236717 |
atacgctaaagcgatgcaacgaagactactagccgccataccttgaataatcctttcgaatttcaacatggtttcattgtcaagatctttcgaaattcca |
4236816 |
T |
 |
| Q |
1278 |
taaccatcatagtatcttgaacacattcttagtaccatctctgctcctcct |
1328 |
Q |
| |
|
||||||||| |||| ||||||||||||||||||||||||||||| ||||| |
|
|
| T |
4236817 |
aaaccatcatggtattttgaacacattcttagtaccatctctgctgctcct |
4236867 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 65 - 396
Target Start/End: Complemental strand, 30441730 - 30441398
Alignment:
| Q |
65 |
cttcaaagacattctttttctccaatttccttgcattaaactcattaaacacttgacatagaacaaatgtattaaaaatcaatgtgtcatttacctttga |
164 |
Q |
| |
|
||||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |
|
|
| T |
30441730 |
cttcaaacacatttttgttctccaatttccttgcattaaactcattaaacacttgacatagaacaaatgtattaaatatcaatgtgtcatttacctttaa |
30441631 |
T |
 |
| Q |
165 |
tgtcacaccaaaaatatcctcacctttgaattgaagagttaacaaaattactatttggtacaaagcttgtgacacaagattcctccacataatgttagta |
264 |
Q |
| |
|
||||||||||||| ||| |||||||||||||||| ||| ||||||||| |||||| ||||| |||||||||| |||||||||| || ||||| | ||| |
|
|
| T |
30441630 |
tgtcacaccaaaattattgtcacctttgaattgaaaagtcaacaaaattgatatttgatacaaggcttgtgacataagattcctctacgtaatgcttgta |
30441531 |
T |
 |
| Q |
265 |
ataagaggctttgttctaccaac-tggtttttcatccattaattccttagtaggtttttcagttgcaagagccaaagcacctaatgtatccataattaaa |
363 |
Q |
| |
|
|||||||||||| |||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| |
|
|
| T |
30441530 |
ataagaggctttattctaccaacaattttttttatccattagttccttagtaggtttttcagttgcaagagccaaagcatctaatgtatccataatcaaa |
30441431 |
T |
 |
| Q |
364 |
ttcacccataataattgaactgctgttaatggt |
396 |
Q |
| |
|
|||||||||||||||||||||| | |||||||| |
|
|
| T |
30441430 |
ttcacccataataattgaactgatattaatggt |
30441398 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 135; Significance: 1e-69; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 135; E-Value: 1e-69
Query Start/End: Original strand, 27 - 234
Target Start/End: Complemental strand, 29475961 - 29475752
Alignment:
| Q |
27 |
accaataattcccaaaaacaacttgctcttgaatattccttcaaagacattctttttctccaatttccttgcattaaactcattaaacacttgacataga |
126 |
Q |
| |
|
||||||| ||||| ||||||||||||| || |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29475961 |
accaatatttccctaaaacaacttgcttttacatatcccttcaaaaacattctttttctccaatttccttgcattaaactcattaaacacttgacataga |
29475862 |
T |
 |
| Q |
127 |
acaaatgtatta--aaaatcaatgtgtcatttacctttgatgtcacaccaaaaatatcctcacctttgaattgaagagttaacaaaattactatttggta |
224 |
Q |
| |
|
||||||||||| || |||||| ||||||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||||||||||| | |
|
|
| T |
29475861 |
gcaaatgtattaagaatatcaatatgtcatttacctttgatgtcataccaaaaataatatcacctttaaattgaagagttaacaaaattactatttggaa |
29475762 |
T |
 |
| Q |
225 |
caaagcttgt |
234 |
Q |
| |
|
|||||||||| |
|
|
| T |
29475761 |
caaagcttgt |
29475752 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 120; Significance: 9e-61; HSPs: 4)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 120; E-Value: 9e-61
Query Start/End: Original strand, 425 - 644
Target Start/End: Original strand, 19592829 - 19593039
Alignment:
| Q |
425 |
aattgataacaagtgctgccacattcactgttagttgaaattgaatgaatttttgaatgttgttgtaaacacatcttccccagtttaaaactgttactat |
524 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| |
|
|
| T |
19592829 |
aattgataacaagtgctgccacattcact---------aattgaatgaatttttgaatgttgttgtaaacacatcttccccaatttaaaattgttactat |
19592919 |
T |
 |
| Q |
525 |
agatgcaaaattgtcatctaatataacaatatctgaactctcttttgctacttctgtaccttgaattcccattgaaagaccgatatcggcttctttcaat |
624 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||| |||| ||||| | |||| |||||||||| | |
|
|
| T |
19592920 |
agatgcaaaattgtcatctaatataacaatatctgagctctcttttgcaacttcggtaccttgaatttccatggaaagttcaatattagcttctttcagt |
19593019 |
T |
 |
| Q |
625 |
gccggtgcatcgtttgttcc |
644 |
Q |
| |
|
|| | |||||| ||| |||| |
|
|
| T |
19593020 |
gctgatgcatcatttcttcc |
19593039 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 300 - 728
Target Start/End: Original strand, 38356756 - 38357184
Alignment:
| Q |
300 |
cattaattccttagtaggtttttcagttgcaagagccaaagcacctaatgtatccataattaaattcacccataataattgaactgctgttaatggtact |
399 |
Q |
| |
|
|||||| ||||| ||||| |||| ||||| || ||||||||||||| |||||||||||| | ||||||||| | | |||||||| |||||| || || |
|
|
| T |
38356756 |
cattaactcctttgtaggcctttctgttgctagtgccaaagcacctagtgtatccataatgagattcacccaaagaagttgaactgttgttaagggaaca |
38356855 |
T |
 |
| Q |
400 |
tcgccggctgaaaccgcggctacgaaattgataacaagtgctgccacattcactgttagttgaaattgaatgaatttttgaatgttgttgtaaacacatc |
499 |
Q |
| |
|
|| || | ||||| || || | || || || ||||||||||| |||||||||||||||||||| ||||| ||||| || ||||||||||||||||||| |
|
|
| T |
38356856 |
tcaccagaagaaactgctgcaataaagtttatcacaagtgctgcaacattcactgttagttgaaactgaataaatttctggatgttgttgtaaacacatc |
38356955 |
T |
 |
| Q |
500 |
ttccccagtttaaaactgttactatagatgcaaaattgtcatctaatataacaatatctgaactctcttttgctacttctgtaccttgaattcccattga |
599 |
Q |
| |
|
||||||| ||||||| ||| | | ||| || ||||| ||||| || || ||||| ||||| ||||| || ||||| || ||||| |||||||| || |
|
|
| T |
38356956 |
ttccccaccttaaaacagttgcaacagaattgaagttgtcgtctaagatgacgatatcggaactttctttggcgacttcggttccttggattcccataga |
38357055 |
T |
 |
| Q |
600 |
aagaccgatatcggcttctttcaatgccggtgcatcgtttgttccatctcctgttacagcaactacatgacctttttgttttaagcattgaaccattaga |
699 |
Q |
| |
|
||| || ||||| |||||||| || || |||||||||||||| || || ||||| || ||||||||||||||||| | | |||||||||| ||||| | | |
|
|
| T |
38357056 |
aagtcctatatcagcttcttttaaggcaggtgcatcgtttgtgccgtcgcctgtgaccgcaactacatgacctttctttcttaagcattgcaccatcaaa |
38357155 |
T |
 |
| Q |
700 |
agtttgtcaaatggagatgatcttgccat |
728 |
Q |
| |
|
|||||||| | || |||||||||||||| |
|
|
| T |
38357156 |
agtttgtccataggggatgatcttgccat |
38357184 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 84; E-Value: 3e-39
Query Start/End: Original strand, 100 - 235
Target Start/End: Original strand, 19592636 - 19592771
Alignment:
| Q |
100 |
ttaaactcattaaacacttgacatagaacaaatgtattaaaaatcaatgtgtcatttacctttgatgtcacaccaaaaatatcctcacctttgaattgaa |
199 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||| ||| |||||||||||||||| |
|
|
| T |
19592636 |
ttaaactcattaaacacttgacatagaacaaatgtattaaatatcaatgtgtcgtttacctttagtgtcacaccaaaattattgtcacctttgaattgaa |
19592735 |
T |
 |
| Q |
200 |
gagttaacaaaattactatttggtacaaagcttgtg |
235 |
Q |
| |
|
||| |||| |||| |||||||||||| ||||||| |
|
|
| T |
19592736 |
aagtcaacataattggtatttggtacaaggcttgtg |
19592771 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 363 - 401
Target Start/End: Original strand, 19592786 - 19592824
Alignment:
| Q |
363 |
attcacccataataattgaactgctgttaatggtacttc |
401 |
Q |
| |
|
||||||||||||||||||||||| | ||||||||||||| |
|
|
| T |
19592786 |
attcacccataataattgaactgttattaatggtacttc |
19592824 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 61; Significance: 2e-25; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 61; E-Value: 2e-25
Query Start/End: Original strand, 1232 - 1328
Target Start/End: Original strand, 21847622 - 21847718
Alignment:
| Q |
1232 |
ttcgaatttcagcatagattcattgtcaagatctttcaaaattccataaccatcatagtatcttgaacacattcttagtaccatctctgctcctcct |
1328 |
Q |
| |
|
||||||||||| ||||||| |||||||||||||||||||||||||| | ||| || ||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
21847622 |
ttcgaatttcaacatagatccattgtcaagatctttcaaaattccacagccaatgtaatatcttgaacacattcttagtaccatctctgcttctcct |
21847718 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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