View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20194_low_11 (Length: 531)

Name: NF20194_low_11
Description: NF20194
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20194_low_11
NF20194_low_11
[»] chr2 (15 HSPs)
chr2 (15-517)||(23853611-23854113)
chr2 (300-380)||(31327431-31327511)
chr2 (300-380)||(31334152-31334232)
chr2 (17-73)||(17495996-17496052)
chr2 (300-368)||(42926006-42926074)
chr2 (19-73)||(31275294-31275349)
chr2 (308-377)||(28603786-28603855)
chr2 (36-73)||(41256219-41256256)
chr2 (29-73)||(24048552-24048596)
chr2 (17-68)||(19541788-19541839)
chr2 (442-509)||(19577809-19577875)
chr2 (434-509)||(38592056-38592131)
chr2 (195-232)||(31327325-31327362)
chr2 (27-67)||(4112297-4112337)
chr2 (32-68)||(31000616-31000652)
[»] chr5 (15 HSPs)
chr5 (195-363)||(23688669-23688835)
chr5 (307-420)||(4872586-4872699)
chr5 (436-509)||(17162675-17162748)
chr5 (457-509)||(17159215-17159267)
chr5 (240-379)||(25688987-25689127)
chr5 (32-71)||(16617460-16617499)
chr5 (17-73)||(17029260-17029317)
chr5 (32-68)||(19571060-19571096)
chr5 (32-71)||(16621482-16621521)
chr5 (32-73)||(11273695-11273736)
chr5 (32-73)||(20715847-20715888)
chr5 (32-73)||(25682159-25682200)
chr5 (36-73)||(26327884-26327921)
chr5 (16-68)||(19443290-19443342)
chr5 (32-68)||(24518962-24518998)
[»] scaffold0171 (2 HSPs)
scaffold0171 (32-73)||(7369-7410)
scaffold0171 (29-73)||(22577-22621)
[»] chr8 (13 HSPs)
chr8 (300-496)||(7002328-7002525)
chr8 (32-73)||(12957568-12957609)
chr8 (24-73)||(28075670-28075719)
chr8 (22-70)||(18790061-18790109)
chr8 (300-470)||(22714241-22714412)
chr8 (19-73)||(13528954-13529008)
chr8 (19-73)||(13618493-13618547)
chr8 (32-73)||(13803108-13803149)
chr8 (32-73)||(32240458-32240499)
chr8 (32-64)||(26853620-26853652)
chr8 (34-73)||(28900142-28900181)
chr8 (20-67)||(32478445-32478492)
chr8 (32-73)||(27117427-27117468)
[»] chr7 (29 HSPs)
chr7 (32-73)||(7152131-7152172)
chr7 (17-73)||(2352144-2352200)
chr7 (17-73)||(19138786-19138842)
chr7 (17-73)||(20738185-20738241)
chr7 (308-379)||(13313625-13313696)
chr7 (35-73)||(7143589-7143627)
chr7 (32-73)||(3401086-3401127)
chr7 (17-70)||(11466915-11466968)
chr7 (32-73)||(21544691-21544732)
chr7 (22-70)||(10925074-10925122)
chr7 (300-379)||(26286482-26286561)
chr7 (35-73)||(3094189-3094227)
chr7 (32-73)||(4091357-4091398)
chr7 (32-73)||(7494503-7494544)
chr7 (32-73)||(18494566-18494607)
chr7 (37-73)||(7325835-7325871)
chr7 (33-68)||(9404615-9404650)
chr7 (32-67)||(14074495-14074530)
chr7 (32-67)||(14384523-14384558)
chr7 (17-52)||(17971182-17971217)
chr7 (32-71)||(18497209-18497248)
chr7 (32-74)||(9974263-9974305)
chr7 (240-278)||(11289485-11289523)
chr7 (27-73)||(12357718-12357764)
chr7 (32-73)||(9121037-9121078)
chr7 (32-73)||(9687091-9687132)
chr7 (300-369)||(30258781-30258850)
chr7 (32-68)||(7776367-7776403)
chr7 (32-68)||(21473037-21473073)
[»] chr6 (17 HSPs)
chr6 (17-73)||(17320777-17320833)
chr6 (29-73)||(22727247-22727291)
chr6 (32-73)||(13194289-13194330)
chr6 (32-73)||(13782417-13782458)
chr6 (32-73)||(13789739-13789780)
chr6 (32-73)||(13803994-13804035)
chr6 (32-74)||(8037056-8037098)
chr6 (32-73)||(6177912-6177953)
chr6 (19-68)||(11076968-11077017)
chr6 (32-72)||(9395432-9395472)
chr6 (32-68)||(15387173-15387209)
chr6 (300-379)||(12689664-12689743)
chr6 (32-67)||(15320095-15320130)
chr6 (34-73)||(15576203-15576242)
chr6 (27-73)||(9942437-9942483)
chr6 (195-231)||(2862978-2863014)
chr6 (195-231)||(2882282-2882318)
[»] chr4 (19 HSPs)
chr4 (300-396)||(8029663-8029759)
chr4 (17-73)||(25367723-25367779)
chr4 (17-74)||(7023033-7023091)
chr4 (32-73)||(20717951-20717992)
chr4 (431-517)||(16948814-16948900)
chr4 (19-73)||(17331493-17331547)
chr4 (32-73)||(10450309-10450350)
chr4 (32-73)||(22219957-22219998)
chr4 (34-67)||(24580023-24580056)
chr4 (32-73)||(30797712-30797753)
chr4 (32-64)||(12805788-12805820)
chr4 (300-435)||(19102659-19102794)
chr4 (17-73)||(24912141-24912197)
chr4 (17-73)||(32022947-32023003)
chr4 (300-379)||(19107289-19107368)
chr4 (22-72)||(39133640-39133691)
chr4 (27-85)||(7144409-7144467)
chr4 (32-73)||(13553468-13553509)
chr4 (32-73)||(51885895-51885936)
[»] chr1 (14 HSPs)
chr1 (17-73)||(23420486-23420542)
chr1 (29-72)||(30676676-30676719)
chr1 (307-435)||(16036305-16036434)
chr1 (300-401)||(23192142-23192243)
chr1 (32-73)||(27682941-27682982)
chr1 (32-73)||(34522132-34522173)
chr1 (24-87)||(27550147-27550209)
chr1 (305-396)||(40166647-40166738)
chr1 (15-73)||(13153609-13153667)
chr1 (300-378)||(39587697-39587775)
chr1 (32-73)||(17836800-17836841)
chr1 (32-73)||(25664823-25664864)
chr1 (477-509)||(5283478-5283510)
chr1 (28-72)||(14581341-14581385)
[»] scaffold0002 (1 HSPs)
scaffold0002 (240-368)||(150909-151038)
[»] chr3 (12 HSPs)
chr3 (240-368)||(13155950-13156079)
chr3 (241-368)||(12566031-12566159)
chr3 (241-368)||(13260434-13260562)
chr3 (305-377)||(29350924-29350996)
chr3 (29-73)||(33913408-33913452)
chr3 (300-401)||(2207115-2207216)
chr3 (32-73)||(25918097-25918138)
chr3 (21-72)||(8839666-8839717)
chr3 (39-73)||(14419353-14419387)
chr3 (32-69)||(5631512-5631549)
chr3 (416-480)||(20508427-20508491)
chr3 (27-67)||(22991546-22991586)
[»] scaffold0362 (1 HSPs)
scaffold0362 (29-73)||(9968-10012)
[»] scaffold0054 (1 HSPs)
scaffold0054 (300-379)||(26134-26213)
[»] scaffold0386 (2 HSPs)
scaffold0386 (32-70)||(7545-7583)
scaffold0386 (33-73)||(10564-10604)
[»] scaffold0855 (1 HSPs)
scaffold0855 (29-73)||(2026-2070)
[»] scaffold0847 (1 HSPs)
scaffold0847 (29-73)||(2191-2235)
[»] scaffold0006 (1 HSPs)
scaffold0006 (39-73)||(78573-78607)
[»] scaffold0999 (1 HSPs)
scaffold0999 (16-73)||(2875-2932)
[»] scaffold0103 (1 HSPs)
scaffold0103 (32-73)||(36503-36544)
[»] scaffold0804 (1 HSPs)
scaffold0804 (28-72)||(1058-1102)
[»] scaffold0108 (1 HSPs)
scaffold0108 (32-68)||(9911-9947)
[»] scaffold0107 (1 HSPs)
scaffold0107 (17-68)||(32853-32905)
[»] scaffold0009 (1 HSPs)
scaffold0009 (300-368)||(147740-147808)


Alignment Details
Target: chr2 (Bit Score: 433; Significance: 0; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 433; E-Value: 0
Query Start/End: Original strand, 15 - 517
Target Start/End: Complemental strand, 23854113 - 23853611
Alignment:
Q  15 cctgtggagacaataatttactactttattacttgttacgatttggtgcacttgtcaatagttgccctttcgtacatatatcatgctcatatgagcattc 114  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23854113 cctgtggagacaataatttactactttattacttgttatgatttggtgcacttgtcaatagttgccctttcgtacatatatcatgctcatatgagcattc 23854014  T
Q  115 ttaatttcaaaggaacattataccgnnnnnnnngactatagtcttaagaacactcttaaatttgatgtggcnnnnnnngaagattaagagaagaaagact 214  Q
    |||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||    
T  23854013 ttaatttcaaaggaacattataccgaaaaaaaagactatagtcttaagaacactcttaaatttgatgtggcaaaaaaagaagattaagagaagaaagact 23853914  T
Q  215 tgttaacacaagtcaaaannnnnnnagagagaagaaaaacattcaaagttttagaatacttttcagtgtaccgaatgaactagctagctatccttttata 314  Q
    ||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23853913 tgttaacacaagtcaaaaggggggaagagagaagaaaaacattcaaagttttagaatacttttcagtgtaccgaatgaactagctagctatccttttata 23853814  T
Q  315 ggaagagtttataactaatacagagaaacttagaaattaagtaaacttaaaaatcatgcaacccatggatcatctaaagtaaaaaacggatcggacaagc 414  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23853813 ggaagagtttataactaatacagagaaacttagaaattaagtaaacttaaaaatcatgcaacccatggatcatctaaagtaaaaaacggatcggacaagc 23853714  T
Q  415 taaaaagaaataaactcacaaaagtggaagaaccaaattaactgaatatgaatgaagaaaatataggaaactcaattggattttcaatcttatcataaac 514  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23853713 taaaaagaaataaactcacaaaagtggaagaaccaaattaactgaatatgaatgaagaaaatataggaaactcaattggattttcaatcttatcataaac 23853614  T
Q  515 aac 517  Q
    |||    
T  23853613 aac 23853611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 300 - 380
Target Start/End: Original strand, 31327431 - 31327511
Alignment:
Q  300 agctatccttttataggaagagtttataactaatacagagaaacttagaaattaagtaaacttaaaaatcatgcaacccat 380  Q
    |||| |||||||||||| ||||||| ||||||||   ||||||||||  |||||||||||||||||||| | |||||||||    
T  31327431 agctctccttttatagggagagtttgtaactaatttggagaaacttaagaattaagtaaacttaaaaattaagcaacccat 31327511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 300 - 380
Target Start/End: Original strand, 31334152 - 31334232
Alignment:
Q  300 agctatccttttataggaagagtttataactaatacagagaaacttagaaattaagtaaacttaaaaatcatgcaacccat 380  Q
    |||| |||||||||||| ||||||| ||||||||   ||||||||||  |||||||||||||||||||| | |||||||||    
T  31334152 agctctccttttatagggagagtttgtaactaatttggagaaacttaagaattaagtaaacttaaaaattaagcaacccat 31334232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 17496052 - 17495996
Alignment:
Q  17 tgtggagacaataatttactactttattacttgttacgatttggtgcacttgtcaat 73  Q
    |||| |||| |||| |||||||| ||||||||||| |||||||||||||||||||||    
T  17496052 tgtgaagactataacttactactatattacttgttccgatttggtgcacttgtcaat 17495996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 300 - 368
Target Start/End: Complemental strand, 42926074 - 42926006
Alignment:
Q  300 agctatccttttataggaagagtttataactaatacagagaaacttagaaattaagtaaacttaaaaat 368  Q
    |||| |||||||||||| ||||||| ||||||||  ||||||| |||  ||||||||||||||||||||    
T  42926074 agctctccttttatagggagagtttgtaactaatttagagaaatttaagaattaagtaaacttaaaaat 42926006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 31275294 - 31275349
Alignment:
Q  19 tggagacaataatttactactttattacttg-ttacgatttggtgcacttgtcaat 73  Q
    ||||||| |||| |||||||||||||||||| ||||||||||||||||||| ||||    
T  31275294 tggagacgataacttactactttattacttgtttacgatttggtgcacttgccaat 31275349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 308 - 377
Target Start/End: Original strand, 28603786 - 28603855
Alignment:
Q  308 ttttataggaagagtttataactaatacagagaaacttagaaattaagtaaacttaaaaatcatgcaacc 377  Q
    ||||||||| ||||||| ||||||||   ||||||||||  |||||||||||||||||||| | ||||||    
T  28603786 ttttatagggagagtttgtaactaatttggagaaacttaagaattaagtaaacttaaaaattaagcaacc 28603855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 36 - 73
Target Start/End: Complemental strand, 41256256 - 41256219
Alignment:
Q  36 tactttattacttgttacgatttggtgcacttgtcaat 73  Q
    |||||||||| |||||||||||||||||||||||||||    
T  41256256 tactttattatttgttacgatttggtgcacttgtcaat 41256219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 29 - 73
Target Start/End: Original strand, 24048552 - 24048596
Alignment:
Q  29 aatttactactttattacttgttacgatttggtgcacttgtcaat 73  Q
    ||||||||||| ||||| |||||||||||||||||| ||||||||    
T  24048552 aatttactactgtattatttgttacgatttggtgcatttgtcaat 24048596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 68
Target Start/End: Original strand, 19541788 - 19541839
Alignment:
Q  17 tgtggagacaataatttactactttattacttgttacgatttggtgcacttg 68  Q
    ||||||||| ||||||||||||||||||| ||| || | |||||||||||||    
T  19541788 tgtggagacgataatttactactttattatttgatatggtttggtgcacttg 19541839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 442 - 509
Target Start/End: Complemental strand, 19577875 - 19577809
Alignment:
Q  442 aagaaccaaattaactgaatatgaatgaagaaaatataggaaactcaattggattttcaatcttatca 509  Q
    ||||| |||| ||| || |||||||||||| |||||||| |||||| |||||||| ||||||||||||    
T  19577875 aagaaacaaactaattggatatgaatgaaggaaatatagaaaactc-attggattctcaatcttatca 19577809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 434 - 509
Target Start/End: Original strand, 38592056 - 38592131
Alignment:
Q  434 aaaagtggaagaaccaaattaactgaatatgaatgaagaaaatataggaaactcaattggattttcaatcttatca 509  Q
    |||| |||| ||| |||| ||| |||||||||||| || |||||||||| |||||||| |||  ||||||||||||    
T  38592056 aaaaatggaggaaacaaactaaatgaatatgaatggaggaaatataggatactcaattagatactcaatcttatca 38592131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 232
Target Start/End: Original strand, 31327325 - 31327362
Alignment:
Q  195 agattaagagaagaaagacttgttaacacaagtcaaaa 232  Q
    |||| |||||||||||||||||| ||||||||||||||    
T  31327325 agatgaagagaagaaagacttgtcaacacaagtcaaaa 31327362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 27 - 67
Target Start/End: Original strand, 4112297 - 4112337
Alignment:
Q  27 ataatttactactttattacttgttacgatttggtgcactt 67  Q
    |||| |||||||||||||||||| |||| ||||||||||||    
T  4112297 ataacttactactttattacttgctacggtttggtgcactt 4112337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 32 - 68
Target Start/End: Original strand, 31000616 - 31000652
Alignment:
Q  32 ttactactttattacttgttacgatttggtgcacttg 68  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  31000616 ttactactttattacttgttacaatttgatgcacttg 31000652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 8e-16; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 195 - 363
Target Start/End: Original strand, 23688669 - 23688835
Alignment:
Q  195 agattaagagaagaaagacttgttaacacaagtcaaaannnnnnnagagagaagaaaaacattcaaagttttagaatacttttcagtgtaccgaatgaac 294  Q
    |||| ||||||||||| |||||| ||||||||||||||       ||||||||||||   |||| |||||| | |||||||||  ||||| ||||| |||    
T  23688669 agatgaagagaagaaacacttgtcaacacaagtcaaaagggg---agagagaagaaaggtattcgaagtttcaaaatacttttatgtgtagcgaattaac 23688765  T
Q  295 tag-ctagctatccttttataggaagagtttataactaatacagagaaacttagaaattaagtaaactta 363  Q
    ||| | |||| ||||||||||| || ||||| |||| |||  |||||||||||  |||||||||||||||    
T  23688766 taggcgagctctccttttatagtaaaagtttgtaacaaatctagagaaacttaagaattaagtaaactta 23688835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 307 - 420
Target Start/End: Original strand, 4872586 - 4872699
Alignment:
Q  307 cttttataggaagagtttataactaatacagagaaacttagaaattaagtaaacttaaaaatcatgcaacccatggatcatctaaagtaaaaaacggatc 406  Q
    |||||||||| ||||||| ||||||||   ||||||||||  |||||| ||||||||||||| | |||||||| | | || || |||||| |||| ||||    
T  4872586 cttttatagggagagtttgtaactaatttggagaaacttaagaattaaataaacttaaaaattaagcaacccacgtaccagctcaagtaacaaactgatc 4872685  T
Q  407 ggacaagctaaaaa 420  Q
    ||| ||| ||||||    
T  4872686 ggataagttaaaaa 4872699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 436 - 509
Target Start/End: Original strand, 17162675 - 17162748
Alignment:
Q  436 aagtggaagaaccaaattaactgaatatgaatgaagaaaatataggaaactcaattggattttcaatcttatca 509  Q
    ||||||| ||| ||||  || ||||||||||||||||||| |||||||||||| ||||| | ||||||||||||    
T  17162675 aagtggaggaaacaaacgaattgaatatgaatgaagaaaagataggaaactcagttggactctcaatcttatca 17162748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 457 - 509
Target Start/End: Original strand, 17159215 - 17159267
Alignment:
Q  457 tgaatatgaatgaagaaaatataggaaactcaattggattttcaatcttatca 509  Q
    ||||||||||||||||||| |||||||||| | ||||| ||||||||||||||    
T  17159215 tgaatatgaatgaagaaaagataggaaacttagttggagtttcaatcttatca 17159267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 240 - 379
Target Start/End: Complemental strand, 25689127 - 25688987
Alignment:
Q  240 agagagaagaaaaacattcaaagttttagaatacttttcagtgtaccgaatgaactag-ctagctatccttttataggaagagtttataactaatacaga 338  Q
    |||||||||||||  |||  |||||| |||||||||||| |||   | |||||||||| | |||| |||||||||||| | ||||| |||| ||| |  |    
T  25689127 agagagaagaaaaggatttgaagtttcagaatacttttcggtgagtcaaatgaactaggcgagctctccttttataggtaaagtttgtaacaaatccgta 25689028  T
Q  339 gaaacttagaaattaagtaaacttaaaaatcatgcaaccca 379  Q
    ||||||||  |||||||||||||||||| | | ||||||||    
T  25689027 gaaacttaataattaagtaaacttaaaagttaagcaaccca 25688987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 32 - 71
Target Start/End: Complemental strand, 16617499 - 16617460
Alignment:
Q  32 ttactactttattacttgttacgatttggtgcacttgtca 71  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  16617499 ttactactttattactagttacgatttggtgcacttgtca 16617460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 17029260 - 17029317
Alignment:
Q  17 tgtggagacaataat-ttactactttattacttgttacgatttggtgcacttgtcaat 73  Q
    ||||||||||||||  |||||| |||||| ||||||||||||||||||||||| ||||    
T  17029260 tgtggagacaataaaattactattttatttcttgttacgatttggtgcacttgccaat 17029317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 68
Target Start/End: Original strand, 19571060 - 19571096
Alignment:
Q  32 ttactactttattacttgttacgatttggtgcacttg 68  Q
    |||||||||||||| ||||||||||||||||||||||    
T  19571060 ttactactttattatttgttacgatttggtgcacttg 19571096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 71
Target Start/End: Complemental strand, 16621521 - 16621482
Alignment:
Q  32 ttactactttattacttgttacgatttggtgcacttgtca 71  Q
    |||||| ||||||||| |||||||||||||||||||||||    
T  16621521 ttactattttattactagttacgatttggtgcacttgtca 16621482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 73
Target Start/End: Complemental strand, 11273736 - 11273695
Alignment:
Q  32 ttactactttattacttgttacgatttggtgcacttgtcaat 73  Q
    |||||||||||||||||||||| ||||| |||||||| ||||    
T  11273736 ttactactttattacttgttacaatttgatgcacttgccaat 11273695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 73
Target Start/End: Original strand, 20715847 - 20715888
Alignment:
Q  32 ttactactttattacttgttacgatttggtgcacttgtcaat 73  Q
    ||||||| ||||||||| |||| |||||||||||||||||||    
T  20715847 ttactaccttattacttattacaatttggtgcacttgtcaat 20715888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 73
Target Start/End: Original strand, 25682159 - 25682200
Alignment:
Q  32 ttactactttattacttgttacgatttggtgcacttgtcaat 73  Q
    |||||| |||||||||||||||||||| ||||||||| ||||    
T  25682159 ttactattttattacttgttacgatttagtgcacttgccaat 25682200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 73
Target Start/End: Complemental strand, 26327921 - 26327884
Alignment:
Q  36 tactttattacttgttacgatttggtgcacttgtcaat 73  Q
    |||||||||||||||||| || ||||||||||||||||    
T  26327921 tactttattacttgttaccatgtggtgcacttgtcaat 26327884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 19443342 - 19443290
Alignment:
Q  16 ctgtggagacaataatttactactttattacttgttacgatttggtgcacttg 68  Q
    ||||| ||||||||| | ||||||||||||| ||| ||||||||| |||||||    
T  19443342 ctgtgaagacaataactcactactttattacctgtaacgatttggggcacttg 19443290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 32 - 68
Target Start/End: Original strand, 24518962 - 24518998
Alignment:
Q  32 ttactactttattacttgttacgatttggtgcacttg 68  Q
    |||||||||||||||||||||||||||| | ||||||    
T  24518962 ttactactttattacttgttacgatttgatacacttg 24518998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 32 - 73
Target Start/End: Original strand, 7369 - 7410
Alignment:
Q  32 ttactactttattacttgttacgatttggtgcacttgtcaat 73  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  7369 ttactactttattacttgttacgatttggtgcacttgtcaat 7410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 29 - 73
Target Start/End: Original strand, 22577 - 22621
Alignment:
Q  29 aatttactactttattacttgttacgatttggtgcacttgtcaat 73  Q
    ||||||||||||||||||||||||| || || |||||||| ||||    
T  22577 aatttactactttattacttgttacaatatgatgcacttgccaat 22621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 300 - 496
Target Start/End: Original strand, 7002328 - 7002525
Alignment:
Q  300 agctatccttttataggaagagtttataactaatacagagaaacttagaaattaagtaaacttaaaaatcatgcaacccatggatcatctaaagtaaaaa 399  Q
    |||| |||||||||||  | ||||| ||| ||||   ||||||||||  |||||||||||||||||||| | ||||||||   |||| || |||||| ||    
T  7002328 agctctccttttatagagatagtttgtaaataatttggagaaacttaataattaagtaaacttaaaaattacgcaacccacaaatcagctcaagtaacaa 7002427  T
Q  400 acggatcggacaag-ctaaaaagaaataaactcacaaaagtggaagaaccaaattaactgaatatgaatgaagaaaatataggaaactcaattggatt 496  Q
    ||| ||| || |||  |||||||||| |||| |||||||||||||  |  | ||||| |  |||||||||||||||| |||| ||||| | |||||||    
T  7002428 acgaatcagataagtttaaaaagaaagaaacccacaaaagtggaatgaatagattaatttgatatgaatgaagaaaagatagaaaactgagttggatt 7002525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 32 - 73
Target Start/End: Original strand, 12957568 - 12957609
Alignment:
Q  32 ttactactttattacttgttacgatttggtgcacttgtcaat 73  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  12957568 ttactactttattacttgttacgatttagtgcacttgtcaat 12957609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 28075670 - 28075719
Alignment:
Q  24 acaataatttactactttattacttgttacgatttggtgcacttgtcaat 73  Q
    ||||||| |||||||||||||||||||||| |||||||| ||||||||||    
T  28075670 acaataacttactactttattacttgttacaatttggtgtacttgtcaat 28075719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 22 - 70
Target Start/End: Original strand, 18790061 - 18790109
Alignment:
Q  22 agacaataatttactactttattacttgttacgatttggtgcacttgtc 70  Q
    |||| |||| |||||||||||||||||| ||||||||||||||||||||    
T  18790061 agacgataacttactactttattacttgatacgatttggtgcacttgtc 18790109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 300 - 470
Target Start/End: Complemental strand, 22714412 - 22714241
Alignment:
Q  300 agctatccttttataggaagagtttataactaatacagagaaacttagaaattaagtaaacttaaaaatcatgcaacccatggatcatctaaagtaaaaa 399  Q
    |||| ||||||||||||  |||||| ||| ||||   ||||||||||  ||||||||||||||| |||| | ||||||||  ||||| || |||||| ||    
T  22714412 agctctccttttatagggggagtttgtaaataatttggagaaacttaagaattaagtaaacttagaaattaagcaacccacagatcagctcaagtaacaa 22714313  T
Q  400 acggatcggacaagct-aaaaagaaataaactcacaaaagtggaagaaccaaattaactgaatatgaatgaa 470  Q
    ||  |||| | ||||| ||||||||| |||| || |||| | || ||| |||| | | ||||||||||||||    
T  22714312 actaatcgcataagctaaaaaagaaacaaacccaaaaaattagatgaaacaaactcattgaatatgaatgaa 22714241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 13529008 - 13528954
Alignment:
Q  19 tggagacaataatttactactttattacttgttacgatttggtgcacttgtcaat 73  Q
    ||||||| |||| ||||||||||||||||| ||| |||||||||||||| |||||    
T  13529008 tggagacgataacttactactttattacttattatgatttggtgcacttatcaat 13528954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 13618547 - 13618493
Alignment:
Q  19 tggagacaataatttactactttattacttgttacgatttggtgcacttgtcaat 73  Q
    ||||||| |||| ||||||||||||||||| ||| |||||||||||||| |||||    
T  13618547 tggagacgataacttactactttattacttattatgatttggtgcacttatcaat 13618493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 32 - 73
Target Start/End: Complemental strand, 13803149 - 13803108
Alignment:
Q  32 ttactactttattacttgttacgatttggtgcacttgtcaat 73  Q
    |||||| ||||||||||||||||||||| |||||||||||||    
T  13803149 ttactattttattacttgttacgatttgatgcacttgtcaat 13803108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 32 - 73
Target Start/End: Original strand, 32240458 - 32240499
Alignment:
Q  32 ttactactttattacttgttacgatttggtgcacttgtcaat 73  Q
    |||||||||||||||||||||| |||||||||||||| ||||    
T  32240458 ttactactttattacttgttacaatttggtgcacttgccaat 32240499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 64
Target Start/End: Original strand, 26853620 - 26853652
Alignment:
Q  32 ttactactttattacttgttacgatttggtgca 64  Q
    |||||||||||||||||||||||||||||||||    
T  26853620 ttactactttattacttgttacgatttggtgca 26853652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 73
Target Start/End: Complemental strand, 28900181 - 28900142
Alignment:
Q  34 actactttattacttgttacgatttggtgcacttgtcaat 73  Q
    |||||||||||||||||||| |||||||| ||||||||||    
T  28900181 actactttattacttgttacaatttggtgtacttgtcaat 28900142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 67
Target Start/End: Complemental strand, 32478492 - 32478445
Alignment:
Q  20 ggagacaataatttactactttattacttgttacgatttggtgcactt 67  Q
    ||||||||||||||||||||||||||||||  ||||||| ||| ||||    
T  32478492 ggagacaataatttactactttattacttggaacgatttagtgaactt 32478445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 73
Target Start/End: Complemental strand, 27117468 - 27117427
Alignment:
Q  32 ttactactttattacttgttacgatttggtgcacttgtcaat 73  Q
    |||||||||||||||||| |||||||||||||| ||| ||||    
T  27117468 ttactactttattacttgatacgatttggtgcatttgccaat 27117427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 32 - 73
Target Start/End: Original strand, 7152131 - 7152172
Alignment:
Q  32 ttactactttattacttgttacgatttggtgcacttgtcaat 73  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  7152131 ttactactttattacttgttacgatttggtgcacttgtcaat 7152172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 2352200 - 2352144
Alignment:
Q  17 tgtggagacaataatttactactttattacttgttacgatttggtgcacttgtcaat 73  Q
    ||||||||  |||| |||||||||||||||||||||||||||| |||||||||||||    
T  2352200 tgtggagatgataacttactactttattacttgttacgatttgatgcacttgtcaat 2352144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 19138842 - 19138786
Alignment:
Q  17 tgtggagacaataatttactactttattacttgttacgatttggtgcacttgtcaat 73  Q
    ||||||||||||||||||||||||||||||||||| | ||| |||||| ||||||||    
T  19138842 tgtggagacaataatttactactttattacttgtttcaattaggtgcatttgtcaat 19138786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 20738241 - 20738185
Alignment:
Q  17 tgtggagacaataatttactactttattacttgttacgatttggtgcacttgtcaat 73  Q
    ||||||||||||||||||||||||||||||||||| | ||| |||||| ||||||||    
T  20738241 tgtggagacaataatttactactttattacttgtttcaattaggtgcatttgtcaat 20738185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 308 - 379
Target Start/End: Complemental strand, 13313696 - 13313625
Alignment:
Q  308 ttttataggaagagtttataactaatacagagaaacttagaaattaagtaaacttaaaaatcatgcaaccca 379  Q
    ||||||||||||||||| ||||||||   ||||||||||  |||||||||||||||||||| | ||||||||    
T  13313696 ttttataggaagagtttgtaactaatttggagaaacttaagaattaagtaaacttaaaaattaagcaaccca 13313625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 35 - 73
Target Start/End: Original strand, 7143589 - 7143627
Alignment:
Q  35 ctactttattacttgttacgatttggtgcacttgtcaat 73  Q
    |||||||||||||||||||||||||||||||||||||||    
T  7143589 ctactttattacttgttacgatttggtgcacttgtcaat 7143627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 32 - 73
Target Start/End: Original strand, 3401086 - 3401127
Alignment:
Q  32 ttactactttattacttgttacgatttggtgcacttgtcaat 73  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  3401086 ttactactttattacttgttacgattttgtgcacttgtcaat 3401127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 17 - 70
Target Start/End: Complemental strand, 11466968 - 11466915
Alignment:
Q  17 tgtggagacaataatttactactttattacttgttacgatttggtgcacttgtc 70  Q
    ||||||||||||||  |||||||||||||||| |||||||||| ||||||||||    
T  11466968 tgtggagacaataacctactactttattacttcttacgatttgatgcacttgtc 11466915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 32 - 73
Target Start/End: Complemental strand, 21544732 - 21544691
Alignment:
Q  32 ttactactttattacttgttacgatttggtgcacttgtcaat 73  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  21544732 ttactactttattacttgttacgatttggtgcacttgccaat 21544691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 22 - 70
Target Start/End: Original strand, 10925074 - 10925122
Alignment:
Q  22 agacaataatttactactttattacttgttacgatttggtgcacttgtc 70  Q
    |||| |||| |||||||||||||||||| ||||||||||||||||||||    
T  10925074 agacgataacttactactttattacttgatacgatttggtgcacttgtc 10925122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 300 - 379
Target Start/End: Complemental strand, 26286561 - 26286482
Alignment:
Q  300 agctatccttttataggaagagtttataactaatacagagaaacttagaaattaagtaaacttaaaaatcatgcaaccca 379  Q
    |||| |||||||| | | ||||||| ||||||||   ||||||||||  |||||||||||||||||||| ||||||||||    
T  26286561 agctctccttttacaaggagagtttgtaactaatttggagaaacttaagaattaagtaaacttaaaaattatgcaaccca 26286482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 35 - 73
Target Start/End: Original strand, 3094189 - 3094227
Alignment:
Q  35 ctactttattacttgttacgatttggtgcacttgtcaat 73  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  3094189 ctactttattacttgttacgatttggtgctcttgtcaat 3094227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 32 - 73
Target Start/End: Complemental strand, 4091398 - 4091357
Alignment:
Q  32 ttactactttattacttgttacgatttggtgcacttgtcaat 73  Q
    |||||||||||||||||||||||||||||| |||||| ||||    
T  4091398 ttactactttattacttgttacgatttggtacacttgccaat 4091357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 32 - 73
Target Start/End: Original strand, 7494503 - 7494544
Alignment:
Q  32 ttactactttattacttgttacgatttggtgcacttgtcaat 73  Q
    |||||| |||||||||||||||||||||||||||||| ||||    
T  7494503 ttactaatttattacttgttacgatttggtgcacttgccaat 7494544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 32 - 73
Target Start/End: Complemental strand, 18494607 - 18494566
Alignment:
Q  32 ttactactttattacttgttacgatttggtgcacttgtcaat 73  Q
    ||||||| ||||||||||||||||||||||||||||| ||||    
T  18494607 ttactaccttattacttgttacgatttggtgcacttgccaat 18494566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 7325871 - 7325835
Alignment:
Q  37 actttattacttgttacgatttggtgcacttgtcaat 73  Q
    ||||||||||||||||||||||| |||||||||||||    
T  7325871 actttattacttgttacgatttgatgcacttgtcaat 7325835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 33 - 68
Target Start/End: Complemental strand, 9404650 - 9404615
Alignment:
Q  33 tactactttattacttgttacgatttggtgcacttg 68  Q
    |||||||||||||||||| |||||||||||||||||    
T  9404650 tactactttattacttgtcacgatttggtgcacttg 9404615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 14074495 - 14074530
Alignment:
Q  32 ttactactttattacttgttacgatttggtgcactt 67  Q
    ||||||||||||||||||||||||||| ||||||||    
T  14074495 ttactactttattacttgttacgattttgtgcactt 14074530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 14384523 - 14384558
Alignment:
Q  32 ttactactttattacttgttacgatttggtgcactt 67  Q
    ||||||||||||||||||||||||||| ||||||||    
T  14384523 ttactactttattacttgttacgattttgtgcactt 14384558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 17971182 - 17971217
Alignment:
Q  17 tgtggagacaataatttactactttattacttgtta 52  Q
    |||||||||||||| |||||||||||||||||||||    
T  17971182 tgtggagacaataacttactactttattacttgtta 17971217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 71
Target Start/End: Original strand, 18497209 - 18497248
Alignment:
Q  32 ttactactttattacttgttacgatttggtgcacttgtca 71  Q
    ||||||| || |||||||||||||||||||||||||||||    
T  18497209 ttactacattgttacttgttacgatttggtgcacttgtca 18497248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 32 - 74
Target Start/End: Original strand, 9974263 - 9974305
Alignment:
Q  32 ttactactttattacttgttacgatttggtgcacttgtcaata 74  Q
    ||||||||||||||| |||||| ||||||||||||||| ||||    
T  9974263 ttactactttattacatgttaccatttggtgcacttgttaata 9974305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 240 - 278
Target Start/End: Complemental strand, 11289523 - 11289485
Alignment:
Q  240 agagagaagaaaaacattcaaagttttagaatacttttc 278  Q
    |||||||||||||| ||||||||||| ||||||||||||    
T  11289523 agagagaagaaaaagattcaaagtttcagaatacttttc 11289485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 27 - 73
Target Start/End: Complemental strand, 12357764 - 12357718
Alignment:
Q  27 ataatttactactttattacttgttacgatttggtgcacttgtcaat 73  Q
    |||| ||||||||||| ||||||||||||| ||||||||||| ||||    
T  12357764 ataacttactactttaatacttgttacgatctggtgcacttgacaat 12357718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 73
Target Start/End: Complemental strand, 9121078 - 9121037
Alignment:
Q  32 ttactactttattacttgttacgatttggtgcacttgtcaat 73  Q
    ||||||| ||||||||||||||||||||| ||||||| ||||    
T  9121078 ttactaccttattacttgttacgatttggcgcacttgacaat 9121037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 73
Target Start/End: Complemental strand, 9687132 - 9687091
Alignment:
Q  32 ttactactttattacttgttacgatttggtgcacttgtcaat 73  Q
    ||||||||||||||||| |||||||||| | |||||||||||    
T  9687132 ttactactttattacttattacgatttgatacacttgtcaat 9687091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 369
Target Start/End: Original strand, 30258781 - 30258850
Alignment:
Q  300 agctatccttttataggaagagtttataactaatacagagaaacttagaaattaagtaaacttaaaaatc 369  Q
    |||| ||||| |||||| ||| ||| |||||||| |  |||||||||  |||||||||||||||||||||    
T  30258781 agctctccttatatagggagaatttgtaactaattcgaagaaacttaagaattaagtaaacttaaaaatc 30258850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 32 - 68
Target Start/End: Complemental strand, 7776403 - 7776367
Alignment:
Q  32 ttactactttattacttgttacgatttggtgcacttg 68  Q
    |||||||||| |||||||||| |||||||||||||||    
T  7776403 ttactactttgttacttgttaagatttggtgcacttg 7776367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 32 - 68
Target Start/End: Original strand, 21473037 - 21473073
Alignment:
Q  32 ttactactttattacttgttacgatttggtgcacttg 68  Q
    |||||||||||| |||||||| |||||||||||||||    
T  21473037 ttactactttataacttgttatgatttggtgcacttg 21473073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 17320777 - 17320833
Alignment:
Q  17 tgtggagacaataatttactactttattacttgttacgatttggtgcacttgtcaat 73  Q
    |||||||||||||| | ||||||||||||||| ||||||||||||||||||| ||||    
T  17320777 tgtggagacaataactaactactttattacttattacgatttggtgcacttgccaat 17320833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 29 - 73
Target Start/End: Original strand, 22727247 - 22727291
Alignment:
Q  29 aatttactactttattacttgttacgatttggtgcacttgtcaat 73  Q
    ||||||||||||||||||||||||| |||||||||||||||||||    
T  22727247 aatttactactttattacttgttacaatttggtgcacttgtcaat 22727291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 32 - 73
Target Start/End: Original strand, 13194289 - 13194330
Alignment:
Q  32 ttactactttattacttgttacgatttggtgcacttgtcaat 73  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  13194289 ttactactttattacttgttacgatttggtgcacttgccaat 13194330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 32 - 73
Target Start/End: Original strand, 13782417 - 13782458
Alignment:
Q  32 ttactactttattacttgttacgatttggtgcacttgtcaat 73  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  13782417 ttactactttattaattgttacgatttggtgcacttgtcaat 13782458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 32 - 73
Target Start/End: Original strand, 13789739 - 13789780
Alignment:
Q  32 ttactactttattacttgttacgatttggtgcacttgtcaat 73  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  13789739 ttactactttattaattgttacgatttggtgcacttgtcaat 13789780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 32 - 73
Target Start/End: Original strand, 13803994 - 13804035
Alignment:
Q  32 ttactactttattacttgttacgatttggtgcacttgtcaat 73  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  13803994 ttactactttattaattgttacgatttggtgcacttgtcaat 13804035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 32 - 74
Target Start/End: Original strand, 8037056 - 8037098
Alignment:
Q  32 ttactactttattacttgttacgatttggtgcacttgtcaata 74  Q
    ||||||||||||||||||||||||||| ||||||||| |||||    
T  8037056 ttactactttattacttgttacgatttagtgcacttgccaata 8037098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 32 - 73
Target Start/End: Original strand, 6177912 - 6177953
Alignment:
Q  32 ttactactttattacttgttacgatttggtgcacttgtcaat 73  Q
    |||||||||| ||||||||||||||||| |||||||||||||    
T  6177912 ttactactttgttacttgttacgatttgatgcacttgtcaat 6177953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 11076968 - 11077017
Alignment:
Q  19 tggagacaataatttactactttattacttgttacgatttggtgcacttg 68  Q
    |||||||||||| |||||||||| |||||||||||  |||||||||||||    
T  11076968 tggagacaataacttactacttttttacttgttacagtttggtgcacttg 11077017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 72
Target Start/End: Complemental strand, 9395472 - 9395432
Alignment:
Q  32 ttactactttattacttgttacgatttggtgcacttgtcaa 72  Q
    ||||||||| |||||||||||||||||| ||||||||||||    
T  9395472 ttactacttcattacttgttacgatttgttgcacttgtcaa 9395432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 68
Target Start/End: Original strand, 15387173 - 15387209
Alignment:
Q  32 ttactactttattacttgttacgatttggtgcacttg 68  Q
    ||||||||||||| |||||||||||||||||||||||    
T  15387173 ttactactttattgcttgttacgatttggtgcacttg 15387209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 300 - 379
Target Start/End: Original strand, 12689664 - 12689743
Alignment:
Q  300 agctatccttttataggaagagtttataactaatacagagaaacttagaaattaagtaaacttaaaaatcatgcaaccca 379  Q
    |||| |||||||||| | ||||||||||| | ||   ||||||||||  |||||||||||||||||||| | ||||||||    
T  12689664 agctctccttttataaggagagtttataattgatttggagaaacttaagaattaagtaaacttaaaaattaagcaaccca 12689743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 15320095 - 15320130
Alignment:
Q  32 ttactactttattacttgttacgatttggtgcactt 67  Q
    ||||||||||||| ||||||||||||||||||||||    
T  15320095 ttactactttattgcttgttacgatttggtgcactt 15320130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 73
Target Start/End: Original strand, 15576203 - 15576242
Alignment:
Q  34 actactttattacttgttacgatttggtgcacttgtcaat 73  Q
    |||||||||||||||||||||||||| |||||||| ||||    
T  15576203 actactttattacttgttacgatttgatgcacttgccaat 15576242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 27 - 73
Target Start/End: Complemental strand, 9942483 - 9942437
Alignment:
Q  27 ataatttactactttattacttgttacgatttggtgcacttgtcaat 73  Q
    ||||| ||||||||||||||||||||  |||||||||||||| ||||    
T  9942483 ataatatactactttattacttgttataatttggtgcacttgccaat 9942437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 195 - 231
Target Start/End: Complemental strand, 2863014 - 2862978
Alignment:
Q  195 agattaagagaagaaagacttgttaacacaagtcaaa 231  Q
    |||| ||||||||||||||| ||||||||||||||||    
T  2863014 agatgaagagaagaaagactcgttaacacaagtcaaa 2862978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 195 - 231
Target Start/End: Complemental strand, 2882318 - 2882282
Alignment:
Q  195 agattaagagaagaaagacttgttaacacaagtcaaa 231  Q
    |||| ||||||||||||||| ||||||||||||||||    
T  2882318 agatgaagagaagaaagactcgttaacacaagtcaaa 2882282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 300 - 396
Target Start/End: Complemental strand, 8029759 - 8029663
Alignment:
Q  300 agctatccttttataggaagagtttataactaatacagagaaacttagaaattaagtaaacttaaaaatcatgcaacccatggatcatctaaagtaa 396  Q
    |||| |||||||||||| ||||||| ||||||||   ||||||||||  |||||||||||||||||||| | ||||||||  ||||| || ||||||    
T  8029759 agctctccttttatagggagagtttgtaactaatttggagaaacttaagaattaagtaaacttaaaaattaagcaacccacagatcagctcaagtaa 8029663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 25367723 - 25367779
Alignment:
Q  17 tgtggagacaataatttactactttattacttgttacgatttggtgcacttgtcaat 73  Q
    |||||||||  ||| |||||||||||||||||||| |||||||||||||||||||||    
T  25367723 tgtggagactgtaacttactactttattacttgtttcgatttggtgcacttgtcaat 25367779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 7023091 - 7023033
Alignment:
Q  17 tgtggagacaataat-ttactactttattacttgttacgatttggtgcacttgtcaata 74  Q
    ||||||||||||||  |||||||||||||| ||||||||||||||||||||| ||||||    
T  7023091 tgtggagacaataaacttactactttattatttgttacgatttggtgcacttatcaata 7023033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 32 - 73
Target Start/End: Original strand, 20717951 - 20717992
Alignment:
Q  32 ttactactttattacttgttacgatttggtgcacttgtcaat 73  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  20717951 ttactactttattacttgttacgatttggtgcacttgccaat 20717992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 431 - 517
Target Start/End: Original strand, 16948814 - 16948900
Alignment:
Q  431 cacaaaagtggaagaaccaaattaactgaatatgaatgaagaaaatataggaaactcaattggattttcaatcttatcataaacaac 517  Q
    |||||||||| | ||| |||| ||| || ||||| |||||| | |||||||||||||| || |||| ||||||||||||||| ||||    
T  16948814 cacaaaagtgaatgaaacaaactaattggatatggatgaaggagatataggaaactcagttcgattctcaatcttatcataaccaac 16948900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 17331547 - 17331493
Alignment:
Q  19 tggagacaataatttactactttattacttgttacgatttggtgcacttgtcaat 73  Q
    ||||||| |||| |||||||||||||||||  ||||||||||||||||| |||||    
T  17331547 tggagactataacttactactttattacttactacgatttggtgcacttttcaat 17331493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 32 - 73
Target Start/End: Complemental strand, 10450350 - 10450309
Alignment:
Q  32 ttactactttattacttgttacgatttggtgcacttgtcaat 73  Q
    |||||||||||||| |||||||||||||||||||||| ||||    
T  10450350 ttactactttattatttgttacgatttggtgcacttgccaat 10450309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 32 - 73
Target Start/End: Original strand, 22219957 - 22219998
Alignment:
Q  32 ttactactttattacttgttacgatttggtgcacttgtcaat 73  Q
    ||||||||||||||||||||| ||||| ||||||||||||||    
T  22219957 ttactactttattacttgttatgatttagtgcacttgtcaat 22219998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 34 - 67
Target Start/End: Original strand, 24580023 - 24580056
Alignment:
Q  34 actactttattacttgttacgatttggtgcactt 67  Q
    ||||||||||||||||||||||||||||||||||    
T  24580023 actactttattacttgttacgatttggtgcactt 24580056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 32 - 73
Target Start/End: Original strand, 30797712 - 30797753
Alignment:
Q  32 ttactactttattacttgttacgatttggtgcacttgtcaat 73  Q
    |||||||||||||||||||||||||||| |||||||| ||||    
T  30797712 ttactactttattacttgttacgatttgatgcacttgccaat 30797753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 64
Target Start/End: Complemental strand, 12805820 - 12805788
Alignment:
Q  32 ttactactttattacttgttacgatttggtgca 64  Q
    |||||||||||||||||||||||||||||||||    
T  12805820 ttactactttattacttgttacgatttggtgca 12805788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 300 - 435
Target Start/End: Original strand, 19102659 - 19102794
Alignment:
Q  300 agctatccttttataggaagagtttataactaatacagagaaacttagaaattaagtaaacttaaaaatcatgcaacccatggatcatctaaagtaaaaa 399  Q
    |||| |||||||||||| ||||||| ||||||||   ||||||||||  |||| ||||||||||||||| | ||||||||   |||| || |||||| ||    
T  19102659 agctctccttttatagggagagtttgtaactaatttggagaaacttaagaatt-agtaaacttaaaaattaagcaacccacatatcagctcaagtaacaa 19102757  T
Q  400 acggatcggacaagct-aaaaagaaataaactcacaa 435  Q
    ||| || ||| ||| | ||||||||| |||| |||||    
T  19102758 acgaataggataagttcaaaaagaaacaaacccacaa 19102794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 24912197 - 24912141
Alignment:
Q  17 tgtggagacaataatttactactttattacttgttacgatttggtgcacttgtcaat 73  Q
    ||||||||  |||| || ||||||||||||||||| | |||||||||||||||||||    
T  24912197 tgtggagatgataacttgctactttattacttgtttcaatttggtgcacttgtcaat 24912141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 32022947 - 32023003
Alignment:
Q  17 tgtggagacaataatttactactttattacttgttacgatttggtgcacttgtcaat 73  Q
    ||||||||  |||| ||| ||||||||||||||||||||||| || |||||||||||    
T  32022947 tgtggagaagataacttattactttattacttgttacgatttagtacacttgtcaat 32023003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 300 - 379
Target Start/End: Original strand, 19107289 - 19107368
Alignment:
Q  300 agctatccttttataggaagagtttataactaatacagagaaacttagaaattaagtaaacttaaaaatcatgcaaccca 379  Q
    |||| |||||||||||| ||| ||| ||||||||   |||||| |||  |||||||||||||||||||| | ||||||||    
T  19107289 agctctccttttatagggagaatttgtaactaatttggagaaatttaagaattaagtaaacttaaaaattaagcaaccca 19107368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 22 - 72
Target Start/End: Complemental strand, 39133691 - 39133640
Alignment:
Q  22 agacaataatttactactttattactt-gttacgatttggtgcacttgtcaa 72  Q
    ||||||||||| |||||||||||||||   ||||||||||||||||||||||    
T  39133691 agacaataattaactactttattacttaagtacgatttggtgcacttgtcaa 39133640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 27 - 85
Target Start/End: Original strand, 7144409 - 7144467
Alignment:
Q  27 ataatttactactttattacttgttacgatttggtgcacttgtcaatagttgccctttc 85  Q
    |||| |||||||||||||| || |||||||||||| |||||| ||||| || |||||||    
T  7144409 ataacttactactttattatttattacgatttggtacacttgccaataattaccctttc 7144467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 73
Target Start/End: Complemental strand, 13553509 - 13553468
Alignment:
Q  32 ttactactttattacttgttacgatttggtgcacttgtcaat 73  Q
    ||||||||||||||||| |||||||||| | |||||||||||    
T  13553509 ttactactttattacttattacgatttgatacacttgtcaat 13553468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 73
Target Start/End: Original strand, 51885895 - 51885936
Alignment:
Q  32 ttactactttattacttgttacgatttggtgcacttgtcaat 73  Q
    |||||||||||||||||| ||||||| |||||||||| ||||    
T  51885895 ttactactttattacttgatacgattcggtgcacttgccaat 51885936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 23420542 - 23420486
Alignment:
Q  17 tgtggagacaataatttactactttattacttgttacgatttggtgcacttgtcaat 73  Q
    ||||||||| |||| |||||||||||||||||||||||||||||| |||||| ||||    
T  23420542 tgtggagacgataacttactactttattacttgttacgatttggtacacttgccaat 23420486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 29 - 72
Target Start/End: Original strand, 30676676 - 30676719
Alignment:
Q  29 aatttactactttattacttgttacgatttggtgcacttgtcaa 72  Q
    |||||||||||||||||||||||||||||||||| |||||||||    
T  30676676 aatttactactttattacttgttacgatttggtgaacttgtcaa 30676719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 307 - 435
Target Start/End: Original strand, 16036305 - 16036434
Alignment:
Q  307 cttttataggaagagtttataactaatacagagaaacttagaaattaagtaaacttaaaaatcatgcaacccatggatcatctaaagtaaaaaacggatc 406  Q
    |||||||||| ||||||| ||||||||   ||||||||||  |||||||||||||||||||| | ||||||||  ||||| || ||| || ||||  |||    
T  16036305 cttttatagggagagtttgtaactaatttggagaaacttaagaattaagtaaacttaaaaattaagcaacccacagatcagctcaagaaacaaactaatc 16036404  T
Q  407 ggacaagct-aaaaagaaataaactcacaa 435  Q
    ||| ||| | ||||||||| |||| |||||    
T  16036405 ggataagttcaaaaagaaacaaacccacaa 16036434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 300 - 401
Target Start/End: Complemental strand, 23192243 - 23192142
Alignment:
Q  300 agctatccttttataggaagagtttataactaatacagagaaacttagaaattaagtaaacttaaaaatcatgcaacccatggatcatctaaagtaaaaa 399  Q
    |||| |||||||||||| ||||||| ||||||||   |||||||| |  |||||||||||||||||||| | ||||||||  ||||| || |||||| ||    
T  23192243 agctctccttttatagggagagtttgtaactaatttggagaaactaaagaattaagtaaacttaaaaattaagcaacccacagatcagctcaagtaacaa 23192144  T
Q  400 ac 401  Q
    ||    
T  23192143 ac 23192142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 32 - 73
Target Start/End: Original strand, 27682941 - 27682982
Alignment:
Q  32 ttactactttattacttgttacgatttggtgcacttgtcaat 73  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  27682941 ttactactttattacttgttacggtttggtgcacttgtcaat 27682982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 32 - 73
Target Start/End: Original strand, 34522132 - 34522173
Alignment:
Q  32 ttactactttattacttgttacgatttggtgcacttgtcaat 73  Q
    |||||| |||||||||||||||||||||||||||||| ||||    
T  34522132 ttactattttattacttgttacgatttggtgcacttgccaat 34522173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 87
Target Start/End: Complemental strand, 27550209 - 27550147
Alignment:
Q  24 acaataatttactactttattacttgttacgatttggtgcacttgtcaatagttgccctttcgt 87  Q
    ||||||| ||||||||||||||||| |||| |||||| ||| ||||||||| || |||||||||    
T  27550209 acaataacttactactttattacttattaccatttggagcaattgtcaata-tttccctttcgt 27550147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 396
Target Start/End: Original strand, 40166647 - 40166738
Alignment:
Q  305 tccttttataggaagagtttataactaatacagagaaacttagaaattaagtaaacttaaaaatcatgcaacccatggatcatctaaagtaa 396  Q
    ||||||| |||| | | ||||||||||||   ||||||||||  |||||||||||||||||||| | ||||||||  ||||| || ||||||    
T  40166647 tccttttttagggataatttataactaatttggagaaacttaagaattaagtaaacttaaaaattaagcaacccacagatcagctcaagtaa 40166738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 13153609 - 13153667
Alignment:
Q  15 cctgtggagacaataatttactactttattacttgttacgatttggtgcacttgtcaat 73  Q
    ||||||||||| ||||| ||||  |||||||||||||  |||||||||||| |||||||    
T  13153609 cctgtggagacgataatctactgttttattacttgttttgatttggtgcacctgtcaat 13153667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 300 - 378
Target Start/End: Complemental strand, 39587775 - 39587697
Alignment:
Q  300 agctatccttttataggaagagtttataactaatacagagaaacttagaaattaagtaaacttaaaaatcatgcaaccc 378  Q
    |||| |||||||| ||| ||||||| ||||||||   ||||||| ||  |||||||||||||||||||| | |||||||    
T  39587775 agctctccttttacagggagagtttgtaactaatttggagaaacataagaattaagtaaacttaaaaattaagcaaccc 39587697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 73
Target Start/End: Complemental strand, 17836841 - 17836800
Alignment:
Q  32 ttactactttattacttgttacgatttggtgcacttgtcaat 73  Q
    |||||||||| |||||||||| ||||||||||||||| ||||    
T  17836841 ttactactttcttacttgttatgatttggtgcacttgccaat 17836800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 73
Target Start/End: Complemental strand, 25664864 - 25664823
Alignment:
Q  32 ttactactttattacttgttacgatttggtgcacttgtcaat 73  Q
    |||||||||||||||||| || ||||||||||||||| ||||    
T  25664864 ttactactttattacttgatatgatttggtgcacttgccaat 25664823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 477 - 509
Target Start/End: Complemental strand, 5283510 - 5283478
Alignment:
Q  477 ataggaaactcaattggattttcaatcttatca 509  Q
    ||||||||||||||| |||||||||||||||||    
T  5283510 ataggaaactcaattagattttcaatcttatca 5283478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 14581341 - 14581385
Alignment:
Q  28 taatttactactttattacttgttacgatttggtgcacttgtcaa 72  Q
    ||||||| |||||||||||||  ||| ||||||||||||||||||    
T  14581341 taatttattactttattacttagtacaatttggtgcacttgtcaa 14581385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 240 - 368
Target Start/End: Original strand, 150909 - 151038
Alignment:
Q  240 agagagaagaaaaacattcaaagttttagaatacttttcagtgtaccgaatgaactagct-agctatccttttataggaagagtttataactaatacaga 338  Q
    |||||||||||||  |||  |||||| ||||||||| || ||| | |||||||||||| | |||| |||||||||||| |||||| || | ||||   ||    
T  150909 agagagaagaaaagtatttgaagtttcagaatacttctcggtgcatcgaatgaactaggtgagctctccttttatagggagagttcatgattaatctgga 151008  T
Q  339 gaaacttagaaattaagtaaacttaaaaat 368  Q
    ||||||||  | ||||||||||||||||||    
T  151009 gaaacttaagagttaagtaaacttaaaaat 151038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000003; HSPs: 12)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 240 - 368
Target Start/End: Complemental strand, 13156079 - 13155950
Alignment:
Q  240 agagagaagaaaaacattcaaagttttagaatacttttcagtgtaccgaatgaactagct-agctatccttttataggaagagtttataactaatacaga 338  Q
    |||||||||||||  |||  |||||| ||||||||| || ||| | |||||||||||| | |||| |||||||||||| |||||| || | ||||   ||    
T  13156079 agagagaagaaaagtatttgaagtttcagaatacttctcggtgcatcgaatgaactaggtgagctctccttttatagggagagttcatgattaatctgga 13155980  T
Q  339 gaaacttagaaattaagtaaacttaaaaat 368  Q
    ||||||||  | ||||||||||||||||||    
T  13155979 gaaacttaagagttaagtaaacttaaaaat 13155950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 241 - 368
Target Start/End: Complemental strand, 12566159 - 12566031
Alignment:
Q  241 gagagaagaaaaacattcaaagttttagaatacttttcagtgtaccgaatgaacta-gctagctatccttttataggaagagtttataactaatacagag 339  Q
    ||||||||||||| |||  |||||| ||||||||| || ||| | ||||||||||| || |||| | |||||||||| |||||| || | ||||   |||    
T  12566159 gagagaagaaaaatatttgaagtttcagaatacttctcggtgcatcgaatgaactaggcgagctctgcttttatagggagagttcatgattaatctggag 12566060  T
Q  340 aaacttagaaattaagtaaacttaaaaat 368  Q
    ||||||   ||||||||||||||||||||    
T  12566059 aaacttcagaattaagtaaacttaaaaat 12566031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 241 - 368
Target Start/End: Complemental strand, 13260562 - 13260434
Alignment:
Q  241 gagagaagaaaaacattcaaagttttagaatacttttcagtgtaccgaatgaacta-gctagctatccttttataggaagagtttataactaatacagag 339  Q
    ||||||||||||| |||  |||||| ||||||||| || ||| | ||||||||||| || |||| | |||||||||| |||||| || | ||||   |||    
T  13260562 gagagaagaaaaatatttgaagtttcagaatacttctcggtgcatcgaatgaactaggcgagctctgcttttatagggagagttcatgattaatctggag 13260463  T
Q  340 aaacttagaaattaagtaaacttaaaaat 368  Q
    ||||||   ||||||||||||||||||||    
T  13260462 aaacttcagaattaagtaaacttaaaaat 13260434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 305 - 377
Target Start/End: Original strand, 29350924 - 29350996
Alignment:
Q  305 tccttttataggaagagtttataactaatacagagaaacttagaaattaagtaaacttaaaaatcatgcaacc 377  Q
    |||||||||||| ||||||| ||||||||   ||||||||||  |||||||||||||||||||| | ||||||    
T  29350924 tccttttatagggagagtttgtaactaatttggagaaacttaagaattaagtaaacttaaaaattaagcaacc 29350996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 29 - 73
Target Start/End: Complemental strand, 33913452 - 33913408
Alignment:
Q  29 aatttactactttattacttgttacgatttggtgcacttgtcaat 73  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||    
T  33913452 aatttactactttattacttgttacaatttggtgcacttgccaat 33913408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 300 - 401
Target Start/End: Complemental strand, 2207216 - 2207115
Alignment:
Q  300 agctatccttttataggaagagtttataactaatacagagaaacttagaaattaagtaaacttaaaaatcatgcaacccatggatcatctaaagtaaaaa 399  Q
    |||| |||||||| ||| ||||||| ||||| ||    |||||||||  |||||||||||||||||||| | ||||||||| ||||| || |||||| ||    
T  2207216 agctctccttttacagggagagtttgtaactgatttgaagaaacttaataattaagtaaacttaaaaattaagcaacccatagatcagctcaagtaacaa 2207117  T
Q  400 ac 401  Q
    ||    
T  2207116 ac 2207115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 32 - 73
Target Start/End: Complemental strand, 25918138 - 25918097
Alignment:
Q  32 ttactactttattacttgttacgatttggtgcacttgtcaat 73  Q
    ||||||| |||||||||||||| |||||||||||||||||||    
T  25918138 ttactacgttattacttgttacaatttggtgcacttgtcaat 25918097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 72
Target Start/End: Original strand, 8839666 - 8839717
Alignment:
Q  21 gagacaataatttactactttattacttgttacgatttggtgcacttgtcaa 72  Q
    ||||| |||| ||||||||||||||||| ||||| |||| ||||||||||||    
T  8839666 gagacgataacttactactttattacttattacgttttgatgcacttgtcaa 8839717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 39 - 73
Target Start/End: Original strand, 14419353 - 14419387
Alignment:
Q  39 tttattacttgttacgatttggtgcacttgtcaat 73  Q
    |||||||||||||||||||||||||||||| ||||    
T  14419353 tttattacttgttacgatttggtgcacttgccaat 14419387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 69
Target Start/End: Complemental strand, 5631549 - 5631512
Alignment:
Q  32 ttactactttattacttgttacgatttggtgcacttgt 69  Q
    |||||| ||||||||||| |||||||||||||||||||    
T  5631549 ttactaatttattacttggtacgatttggtgcacttgt 5631512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 416 - 480
Target Start/End: Original strand, 20508427 - 20508491
Alignment:
Q  416 aaaaagaaataaactcacaaaagtggaagaaccaaattaactgaatatgaatgaagaaaatatag 480  Q
    |||| |||| |||| |||||||||||| ||| |||| ||| |||||||||| |||||||| ||||    
T  20508427 aaaatgaaacaaacccacaaaagtggaggaaacaaactaattgaatatgaacgaagaaaagatag 20508491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 22991586 - 22991546
Alignment:
Q  27 ataatttactactttattacttgttacgatttggtgcactt 67  Q
    |||||||||||||||||||||||||| |||| | |||||||    
T  22991586 ataatttactactttattacttgttatgattagatgcactt 22991546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0362 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 29 - 73
Target Start/End: Original strand, 9968 - 10012
Alignment:
Q  29 aatttactactttattacttgttacgatttggtgcacttgtcaat 73  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||    
T  9968 aatttactactttattacttgttacgatttggtgcatttgccaat 10012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 300 - 379
Target Start/End: Original strand, 26134 - 26213
Alignment:
Q  300 agctatccttttataggaagagtttataactaatacagagaaacttagaaattaagtaaacttaaaaatcatgcaaccca 379  Q
    |||| |||||||||||| ||||||| ||||||||   ||||||||||  |||||||| ||||||||||| | ||||||||    
T  26134 agctctccttttatagggagagtttgtaactaatttggagaaacttaagaattaagttaacttaaaaattaagcaaccca 26213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 32 - 70
Target Start/End: Complemental strand, 7583 - 7545
Alignment:
Q  32 ttactactttattacttgttacgatttggtgcacttgtc 70  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  7583 ttactactttattacttgttatgatttggtgcacttgtc 7545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 33 - 73
Target Start/End: Complemental strand, 10604 - 10564
Alignment:
Q  33 tactactttattacttgttacgatttggtgcacttgtcaat 73  Q
    |||||| ||||||||||||| ||||||||||||||||||||    
T  10604 tactacattattacttgttatgatttggtgcacttgtcaat 10564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0855 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0855
Description:

Target: scaffold0855; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 29 - 73
Target Start/End: Complemental strand, 2070 - 2026
Alignment:
Q  29 aatttactactttattacttgttacgatttggtgcacttgtcaat 73  Q
    |||||||||||||| || |||||||||||||||||||||| ||||    
T  2070 aatttactactttaatatttgttacgatttggtgcacttgccaat 2026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0847 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0847
Description:

Target: scaffold0847; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 29 - 73
Target Start/End: Complemental strand, 2235 - 2191
Alignment:
Q  29 aatttactactttattacttgttacgatttggtgcacttgtcaat 73  Q
    |||||||||||||| || |||||||||||||||||||||| ||||    
T  2235 aatttactactttaatatttgttacgatttggtgcacttgccaat 2191  T

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Target: scaffold0006 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 39 - 73
Target Start/End: Complemental strand, 78607 - 78573
Alignment:
Q  39 tttattacttgttacgatttggtgcacttgtcaat 73  Q
    |||| ||||||||||||||||||||||||||||||    
T  78607 tttactacttgttacgatttggtgcacttgtcaat 78573  T

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Target: scaffold0999 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0999
Description:

Target: scaffold0999; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 2875 - 2932
Alignment:
Q  16 ctgtggagacaataatttactactttattacttgttacgatttggtgcacttgtcaat 73  Q
    |||||||||| ||||| ||||  |||||||||||||  |||||||||||| |||||||    
T  2875 ctgtggagacgataatctactgttttattacttgttttgatttggtgcacctgtcaat 2932  T

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Target: scaffold0103 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 73
Target Start/End: Complemental strand, 36544 - 36503
Alignment:
Q  32 ttactactttattacttgttacgatttggtgcacttgtcaat 73  Q
    ||||||||||||||||||||  ||||||||||||||| ||||    
T  36544 ttactactttattacttgttgtgatttggtgcacttgccaat 36503  T

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Target: scaffold0804 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0804
Description:

Target: scaffold0804; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 1058 - 1102
Alignment:
Q  28 taatttactactttattacttgttacgatttggtgcacttgtcaa 72  Q
    ||||||| |||||||||||||  ||| ||||||||||||||||||    
T  1058 taatttattactttattacttagtacaatttggtgcacttgtcaa 1102  T

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Target: scaffold0108 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 32 - 68
Target Start/End: Original strand, 9911 - 9947
Alignment:
Q  32 ttactactttattacttgttacgatttggtgcacttg 68  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  9911 ttactactttattacttgttacaatttgatgcacttg 9947  T

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Target: scaffold0107 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 17 - 68
Target Start/End: Original strand, 32853 - 32905
Alignment:
Q  17 tgtggagacaat-aatttactactttattacttgttacgatttggtgcacttg 68  Q
    |||||||||||| || | |||||||||||||||| ||||||||||| ||||||    
T  32853 tgtggagacaattaactaactactttattacttggtacgatttggtacacttg 32905  T

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Target: scaffold0009 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 300 - 368
Target Start/End: Complemental strand, 147808 - 147740
Alignment:
Q  300 agctatccttttataggaagagtttataactaatacagagaaacttagaaattaagtaaacttaaaaat 368  Q
    |||| |||||||||| | ||||||| ||||||||   ||||||||||  ||||| ||||||||||||||    
T  147808 agctctccttttatatggagagtttgtaactaatttggagaaacttaagaattaggtaaacttaaaaat 147740  T

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