View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20194_low_7 (Length: 600)
Name: NF20194_low_7
Description: NF20194
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20194_low_7 |
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Alignment Details
Target: chr6 (Bit Score: 565; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 565; E-Value: 0
Query Start/End: Original strand, 4 - 584
Target Start/End: Complemental strand, 35171271 - 35170691
Alignment:
| Q |
4 |
agatggacatcatcattttgacatgcttttcttacagacaaaggaatccttcccgtagttgatttcatattaactttttggagcctaacatctctatgcc |
103 |
Q |
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| T |
35171271 |
agatggccaacatcattttgacatgcttttcttacagacaaaggaatccttcccgtagttgatttcatattaactttttggagcctaacatctctatgcc |
35171172 |
T |
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| Q |
104 |
tggactcagtagtagtagtactactgagatcgacagagtcacctccgcagatattttctgcagaaagcataacaacttaaaaccatgccaataaataaaa |
203 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35171171 |
tggactcagtagtagtagtactactgagatcgacagagtcacctccgcagatattttctgcagaaagcataacaacttaaaaccatgccaataaataaaa |
35171072 |
T |
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| Q |
204 |
gaatagcaattagaaagttttgtcacaaattcatcctaacagatgatgatattagcatattactattttagccatgtgctcaaggttaattaagatgaat |
303 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35171071 |
gaatagcaattagaaagttttgtcacaaattcatcctaacagatgatgatattagcatattactattttagccatgtgctcaaggttaattaagatgaat |
35170972 |
T |
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| Q |
304 |
ataaacaagaatactatctaattaggacgtataatactatcatatgtatatatccttattcaaaccaaaagtaatattgatatcaaaattcaaaaagaga |
403 |
Q |
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||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35170971 |
ataaacaagaatactatctaattaggacgtataatactaccatatgtatatatccttattcaaaccaaaagtaatattgatatcaaaattcaaaaagaga |
35170872 |
T |
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| Q |
404 |
gcaaaggtaaaccttttaaggaggacccagtttctgaaggctcggtagtataatgacccggaagcattttccaatatttaagagcttgtaaaaccgcatc |
503 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35170871 |
gcaaaggtaaaccttttaaggaggacccagtttccgaaggctcggtagtataatgacccggaagcattttccaatatttaagagcttgtaaaaccgcatc |
35170772 |
T |
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| Q |
504 |
cctcaccggtttgacctataaacgattattcatatatacacatataagttagttaatgagaaacatgaatattgagaaatg |
584 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35170771 |
cctcaccggtttgacctataaacgattattcatatatacacatataagttagttaatgagaaacatgaatattgagaaatg |
35170691 |
T |
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