View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20195_high_14 (Length: 237)
Name: NF20195_high_14
Description: NF20195
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20195_high_14 |
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Alignment Details
Target: chr4 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 28865089 - 28864869
Alignment:
| Q |
1 |
acatcattgattaatagatagatttggagataaacaatataaagaaataacactgctattatacttcacataaaaggatttagactagactagactagat |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
28865089 |
acatcattgattaatagatagatttggagataaacaatataaagaaataacactgctattatacttcacataaaaggatttagactagactagacaagat |
28864990 |
T |
|
| Q |
101 |
atggtattgatgaaggaatgatatgtactggtgttatgcagaagtgtgatgatgccaaccaacaagaaattacgttaatacattctttgtctaatgcctt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| |
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|
| T |
28864989 |
atggtattgatgaaggaatgatatgtactggtgttatgcagaagtgtgatgattccaaccatcaagaaattacgttaatacattctttgtctaatgcctt |
28864890 |
T |
|
| Q |
201 |
aatgatcttaattctaacaat |
221 |
Q |
| |
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||||||||||||||||||||| |
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| T |
28864889 |
aatgatcttaattctaacaat |
28864869 |
T |
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