View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20195_low_8 (Length: 347)

Name: NF20195_low_8
Description: NF20195
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20195_low_8
NF20195_low_8
[»] chr5 (22 HSPs)
chr5 (18-339)||(31329956-31330277)
chr5 (18-339)||(31378738-31379059)
chr5 (17-339)||(31313277-31313599)
chr5 (17-328)||(31363030-31363338)
chr5 (21-328)||(31279240-31279541)
chr5 (21-97)||(40843303-40843379)
chr5 (21-328)||(31643635-31643936)
chr5 (21-97)||(31475921-31475997)
chr5 (21-269)||(31281468-31281712)
chr5 (22-94)||(31407396-31407468)
chr5 (21-266)||(31284752-31284994)
chr5 (21-98)||(31462998-31463075)
chr5 (21-115)||(31317393-31317487)
chr5 (21-94)||(31332234-31332307)
chr5 (17-97)||(31390809-31390889)
chr5 (21-94)||(31381019-31381092)
chr5 (21-94)||(31416529-31416602)
chr5 (230-290)||(31505686-31505746)
chr5 (48-91)||(31483739-31483782)
chr5 (21-115)||(31368607-31368701)
chr5 (230-326)||(31493889-31493982)
chr5 (230-328)||(31317599-31317694)


Alignment Details
Target: chr5 (Bit Score: 314; Significance: 1e-177; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 314; E-Value: 1e-177
Query Start/End: Original strand, 18 - 339
Target Start/End: Original strand, 31329956 - 31330277
Alignment:
Q  18 agttcttccttcaactatctctttggagattggaatttgttcaagataattctttacactgttttcagcttcatcatttgtgtgttaattttatttgccg 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31329956 agttcttccttcaactatctctttggagattggaatttgttcaagataattctttacactgttttcagcttcatcatttgtgtgttaattttatttgccg 31330055  T
Q  118 caaggatatggcaacactcaagaagtcgttggttccaagcgcatacaacatatgttgtattggcaatcacgtcgctatattcatattttttcgataaatt 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  31330056 caaggatatggcaacactcaagaagtcgttggttccaagcgcatacaacatatgttgtattggcaatcacgtcgctatattcatatttttttgataaatt 31330155  T
Q  218 aatgcatataacaccagatgcatatagtctcatttcatgtgcatcctttgctgtcacggcgcttagtttgtcgaggaacaaaactcaatgcggatttgaa 317  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31330156 aatgcatataacaccagatgcatatagtctcatttcatgtgcatcctttgctgtcacggcgcttagtttgtcgaggaacaaaactcaatgcggatttgaa 31330255  T
Q  318 atcgatcttctatatattcttc 339  Q
    ||||||||||||||| ||||||    
T  31330256 atcgatcttctatattttcttc 31330277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 302; E-Value: 1e-170
Query Start/End: Original strand, 18 - 339
Target Start/End: Original strand, 31378738 - 31379059
Alignment:
Q  18 agttcttccttcaactatctctttggagattggaatttgttcaagataattctttacactgttttcagcttcatcatttgtgtgttaattttatttgccg 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||    
T  31378738 agttcttccttcaactatctctttggagattggaatttgttcaagataattctctatactgttttcagcttcatcatttgtgtgttaattttatttgccg 31378837  T
Q  118 caaggatatggcaacactcaagaagtcgttggttccaagcgcatacaacatatgttgtattggcaatcacgtcgctatattcatattttttcgataaatt 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  31378838 caaggatatggcaacactcaagaagtcgttggttccaagcgcatacaacatatgttgtattggcaatcacgtcgctatattcatattttttcgataagtt 31378937  T
Q  218 aatgcatataacaccagatgcatatagtctcatttcatgtgcatcctttgctgtcacggcgcttagtttgtcgaggaacaaaactcaatgcggatttgaa 317  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  31378938 aatgcatataacaccagatgcatatagtctcatttcatgtgcatcctttgctgtcacggtgcttagtttgtcgaggaacaaaactcaatgcggatttgaa 31379037  T
Q  318 atcgatcttctatatattcttc 339  Q
    ||||||||||||||| ||||||    
T  31379038 atcgatcttctatattttcttc 31379059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 17 - 339
Target Start/End: Original strand, 31313277 - 31313599
Alignment:
Q  17 aagttcttccttcaactatctctttggagattggaatttgttcaagataattctttacactgttttcagcttcatcatttgtgtgttaattttatttgcc 116  Q
    ||||||||||||||||||||| |||||||  ||||   ||||   ||||| |||||||||||||||||| |||||| |||| |||||| |||||||||||    
T  31313277 aagttcttccttcaactatctatttggaggatggaccatgttggtgataactctttacactgttttcagtttcatcctttgcgtgttagttttatttgcc 31313376  T
Q  117 gcaaggatatggcaacactcaagaagtcgttggttccaagcgcatacaacatatgttgtattggcaatcacgtcgctatattcatattttttcgataaat 216  Q
    |||||||| ||||||||| ||||||||| |||||||  ||| |||||||||| ||||||||||||||||||||| || |||||||||||||| |||||||    
T  31313377 gcaaggatttggcaacacccaagaagtcattggttcgtagctcatacaacatttgttgtattggcaatcacgtcactgtattcatatttttttgataaat 31313476  T
Q  217 taatgcatataacaccagatgcatatagtctcatttcatgtgcatcctttgctgtcacggcgcttagtttgtcgaggaacaaaactcaatgcggatttga 316  Q
    ||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  31313477 taatggataatacaccagatgcatatagtctcatttcatgtgcatcctttgctgtcacggcgcttagtttgtcgaggaacaaaattcaatgcggatttga 31313576  T
Q  317 aatcgatcttctatatattcttc 339  Q
    |||||||||||||||| ||||||    
T  31313577 aatcgatcttctatattttcttc 31313599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 17 - 328
Target Start/End: Original strand, 31363030 - 31363338
Alignment:
Q  17 aagttcttccttcaactatctctttggagattggaatttgttcaagataattctttacactgttttcagcttcatcatttgtgtgttaattttatttgcc 116  Q
    |||||||||||||||||||||||||||||  ||||   ||||   ||||  |||||||||||||||||| |||  | |||| |||||| |||||||| |     
T  31363030 aagttcttccttcaactatctctttggaggatggaccatgttggtgatagctctttacactgttttcagtttcgccctttgcgtgttagttttatttcc- 31363128  T
Q  117 gcaaggatatggcaacactcaagaagtcgttggttccaagcgcatacaacatatgttgtattggcaatcacgtcgctatattcatattttttcgataaat 216  Q
      |||||||||||||||||||||||||| || ||||  |||  ||||||||| ||||||||||||||| || || || ||||| ||||| ||||||||||    
T  31363129 --aaggatatggcaacactcaagaagtcatttgttcatagctaatacaacatttgttgtattggcaatgacatcactgtattcgtatttcttcgataaat 31363226  T
Q  217 taatgcatataacaccagatgcatatagtctcatttcatgtgcatcctttgctgtcacggcgcttagtttgtcgaggaacaaaactcaatgcggatttga 316  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| ||||||||||||||||||||||||||    
T  31363227 taatgcataatacaccagatgcatatagtctcatttcatgtgcatcctttgctgtctcagcgcttagtttgtcaaggaacaaaactcaatgcggatttga 31363326  T
Q  317 aatcgatcttct 328  Q
    ||||||||||||    
T  31363327 aatcgatcttct 31363338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 21 - 328
Target Start/End: Complemental strand, 31279541 - 31279240
Alignment:
Q  21 tcttccttcaactatctctttggagattggaatttgttcaagataattctttacactgttttcagcttcatcatttgtgtgttaattttatttgccgcaa 120  Q
    |||||||||||||||||||||||||| |||||||| || |||||  | ||||||   |||||||||||||||||| |  || |  |||||||||    ||    
T  31279541 tcttccttcaactatctctttggagaatggaatttcttgaagattttcctttacggcgttttcagcttcatcattagcttggtcgttttatttgt---aa 31279445  T
Q  121 ggatatggcaacactcaagaagtcgttggttccaagcgcatacaacatatgttgtattggcaatcacgtcgctatattcatattttttcgataaattaat 220  Q
      ||||||| |||||||||||||| | | ||| |||| || ||| ||||| | |||||| |||| || ||||||||||||| ||| ||||||||||| ||    
T  31279444 atatatggcgacactcaagaagtcttcgattcaaagcacacacagcatatttggtattgacaatgacctcgctatattcatttttcttcgataaattgat 31279345  T
Q  221 gcatataacaccagatgcatatagtctcatttcatgtgcatcctttgctgtcacggcgcttagtttgtcgaggaacaaaactcaatgcggatttgaaatc 320  Q
    | ||   | ||| |||| |||||| |||||||||||||| ||||||||| ||| | | |||||||||||| ||    ||||||| |||||||||||| |     
T  31279344 gaatgggaaacctgatggatatagcctcatttcatgtgcttcctttgctatcatgtcacttagtttgtcgcgg---caaactcagtgcggatttgaagtt 31279248  T
Q  321 gatcttct 328  Q
    ||||||||    
T  31279247 gatcttct 31279240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 40843379 - 40843303
Alignment:
Q  21 tcttccttcaactatctctttggagattggaatttgttcaagataattctttacactgttttcagcttcatcatttg 97  Q
    ||||||||||||||||| |||||| ||||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  40843379 tcttccttcaactatctatttggaaattggaatttgttgaagataattctttacactgttttcagtttcatcatttg 40843303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 21 - 328
Target Start/End: Complemental strand, 31643936 - 31643635
Alignment:
Q  21 tcttccttcaactatctctttggagattggaatttgttcaagataattctttacactgttttcagcttcatcatttgtgtgttaattttatttgccgcaa 120  Q
    ||||||||||||||||| ||||||||||||||| |||| |||||  | |||||||  |||||||| ||||||||  |  |  | |||||||||||   ||    
T  31643936 tcttccttcaactatctatttggagattggaatctgttgaagattttcctttacagcgttttcagtttcatcatcagcctcatgattttatttgc---aa 31643840  T
Q  121 ggatatggcaacactcaagaagtcgttggttccaagcgcatacaacatatgttgtattggcaatcacgtcgctatattcatattttttcgataaattaat 220  Q
      || ||||||| ||||||||||  | | ||| |||| || ||| ||||| | |||||  ||||||| ||| ||||||||| ||| || |||||| |  |    
T  31643839 aaatgtggcaaccctcaagaagtattcgattcaaagcacacacagcatatttggtattaacaatcacttcgttatattcatttttctttgataaagtggt 31643740  T
Q  221 gcatataacaccagatgcatatagtctcatttcatgtgcatcctttgctgtcacggcgcttagtttgtcgaggaacaaaactcaatgcggatttgaaatc 320  Q
    | ||  || ||||||||||||||| |||||||| ||||| ||||||||| ||| | | ||||||||||||| |    ||||| | |||||||||||| ||    
T  31643739 gaatggaaaaccagatgcatatagcctcatttcttgtgcttcctttgctatcatgtcacttagtttgtcgacg---caaactgagtgcggatttgaattc 31643643  T
Q  321 gatcttct 328  Q
    ||||||||    
T  31643642 gatcttct 31643635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 31475997 - 31475921
Alignment:
Q  21 tcttccttcaactatctctttggagattggaatttgttcaagataattctttacactgttttcagcttcatcatttg 97  Q
    |||||||| |||||||| |||||| | ||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  31475997 tcttcctttaactatctatttggaaactggaatttgttgaagataattctttacactgttttcagtttcatcatttg 31475921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 21 - 269
Target Start/End: Original strand, 31281468 - 31281712
Alignment:
Q  21 tcttccttcaactatctctttggagattggaatttgttcaagataattctttacactgttttcagcttcatcatttgtgtgttaattttatttgccgcaa 120  Q
    ||||||||||| |||||||||||||||||||||||||| |||||  | ||||||   |||||||||||||||||| |  || |  ||||||||   ||||    
T  31281468 tcttccttcaattatctctttggagattggaatttgttgaagattttcctttacggcgttttcagcttcatcattagcttggtcgttttattt---gcaa 31281564  T
Q  121 ggatatggcaacactcaagaagtcgttggttccaagcgcatacaacatatgttgtattggcaatcacgtcgctatattcatattttttcgataaattaat 220  Q
      ||||||| |||||||||||||| | | ||| |||| ||  |  ||||| | |||||  ||||||| ||||| ||||| | ||| || |||||| | ||    
T  31281565 atatatggcgacactcaagaagtcttcgcttcaaagcacactcggcatat-tggtattaacaatcacttcgctgtattcctttttctttgataaagtgat 31281663  T
Q  221 gcatataacaccagatgcatatagtctcatttcatgtgcatcctttgct 269  Q
    | ||  || |||||||||||| ||||| |||||||||||  ||||||||    
T  31281664 gaatggaaaaccagatgcatacagtctaatttcatgtgccgcctttgct 31281712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 22 - 94
Target Start/End: Complemental strand, 31407468 - 31407396
Alignment:
Q  22 cttccttcaactatctctttggagattggaatttgttcaagataattctttacactgttttcagcttcatcat 94  Q
    ||||||||||| |||| |||||| ||||||||||||| |||||| ||||||||||| ||||||| ||||||||    
T  31407468 cttccttcaaccatctatttggaaattggaatttgttgaagatatttctttacactcttttcagtttcatcat 31407396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 21 - 266
Target Start/End: Original strand, 31284752 - 31284994
Alignment:
Q  21 tcttccttcaactatctctttggagattggaatttgttcaagataattctttacactgttttcagcttcatcatttgtgtgttaattttatttgccgcaa 120  Q
    |||||||||||||||||||||||||| |||||| || | |||||||| || ||||   ||||||||||||||||  |  || |  |||| |||   ||||    
T  31284752 tcttccttcaactatctctttggagactggaatctgctgaagataatcctctacagcattttcagcttcatcatcagcttggtggttttgttt---gcaa 31284848  T
Q  121 ggatatggcaacactcaagaagtcgttggttccaagcgcatacaacatatgttgtattggcaatcacgtcgctatattcatattttttcgataaattaat 220  Q
    |||| |||||| |||| ||||||| | ||||| |||| ||| |  | | | | |||||| ||||||| ||  ||||||||| ||| || |||||| || |    
T  31284849 ggatgtggcaaaactcgagaagtcttcggttcaaagctcatgctgcgtttttggtattgacaatcacctcattatattcatttttctttgataaagtagt 31284948  T
Q  221 gcatataacaccagatgcatatagtctcatttcatgtgcatccttt 266  Q
      ||  || ||||||||||||||| |||||||||||||| ||||||    
T  31284949 taatggaaaaccagatgcatatagcctcatttcatgtgcttccttt 31284994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 21 - 98
Target Start/End: Complemental strand, 31463075 - 31462998
Alignment:
Q  21 tcttccttcaactatctctttggagattggaatttgttcaagataattctttacactgttttcagcttcatcatttgt 98  Q
    |||||||||||| |||| |||||| ||||||| ||||| ||||| ||||| |||||||||||||| ||||| ||||||    
T  31463075 tcttccttcaaccatctatttggaaattggaacttgttgaagattattctctacactgttttcagtttcattatttgt 31462998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 21 - 115
Target Start/End: Original strand, 31317393 - 31317487
Alignment:
Q  21 tcttccttcaactatctctttggagattggaatttgttcaagataattctttacactgttttcagcttcatcatttgtgtgttaattttatttgc 115  Q
    |||||||| ||||||||||||||||| ||||||||||| || ||| |||||||||  | |||||| |||||||| ||  || | |||||||||||    
T  31317393 tcttcctttaactatctctttggagaatggaatttgttgaaaatatttctttacagcgctttcagtttcatcatctgcttggtgattttatttgc 31317487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 94
Target Start/End: Original strand, 31332234 - 31332307
Alignment:
Q  21 tcttccttcaactatctctttggagattggaatttgttcaagataattctttacactgttttcagcttcatcat 94  Q
    |||||||||||||| ||||||||||| ||||||||||| || ||| |||| |||| || |||||| ||||||||    
T  31332234 tcttccttcaactacctctttggagaatggaatttgttgaaaatatttctctacagtgctttcagtttcatcat 31332307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 31390889 - 31390809
Alignment:
Q  17 aagttcttccttcaactatctctttggagattggaatttgttcaagataattctttacactgttttcagcttcatcatttg 97  Q
    |||||||||||||||| |||| |||||| | ||||| ||||| |||||  |||| |||||||||||||| ||||| |||||    
T  31390889 aagttcttccttcaaccatctatttggaaactggaacttgttaaagatttttctgtacactgttttcagtttcattatttg 31390809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 21 - 94
Target Start/End: Original strand, 31381019 - 31381092
Alignment:
Q  21 tcttccttcaactatctctttggagattggaatttgttcaagataattctttacactgttttcagcttcatcat 94  Q
    ||||||||||| || ||||||||||| ||||||||||| || ||| |||| |||| || |||||| ||||||||    
T  31381019 tcttccttcaattacctctttggagaatggaatttgttgaaaatatttctctacagtgctttcagtttcatcat 31381092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 21 - 94
Target Start/End: Complemental strand, 31416602 - 31416529
Alignment:
Q  21 tcttccttcaactatctctttggagattggaatttgttcaagataattctttacactgttttcagcttcatcat 94  Q
    ||||| |||||| |||| |||||| ||||||||||||| ||| |||||||||| ||| ||| ||| ||||||||    
T  31416602 tcttctttcaaccatctatttggaaattggaatttgttgaaggtaattctttatactctttccagtttcatcat 31416529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 290
Target Start/End: Complemental strand, 31505746 - 31505686
Alignment:
Q  230 accagatgcatatagtctcatttcatgtgcatcctttgctgtcacggcgcttagtttgtcg 290  Q
    ||||||||||||||| ||||||||| |||| ||||||||| ||| | |||| |||||||||    
T  31505746 accagatgcatatagcctcatttcaagtgcttcctttgctatcatgtcgctcagtttgtcg 31505686  T

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Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 48 - 91
Target Start/End: Original strand, 31483739 - 31483782
Alignment:
Q  48 tggaatttgttcaagataattctttacactgttttcagcttcat 91  Q
    |||| |||||| |||||||||||||||||||||||||| |||||    
T  31483739 tggagtttgttgaagataattctttacactgttttcagtttcat 31483782  T

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Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 115
Target Start/End: Original strand, 31368607 - 31368701
Alignment:
Q  21 tcttccttcaactatctctttggagattggaatttgttcaagataattctttacactgttttcagcttcatcatttgtgtgttaattttatttgc 115  Q
    |||||||| ||||||||||||||||| || |||||||| || ||| |||||||||  | | |||| |||||||| ||  || | |||||||||||    
T  31368607 tcttcctttaactatctctttggagaatgaaatttgttgaaaatatttctttacagcgctgtcagtttcatcatctgcttggtgattttatttgc 31368701  T

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Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 326
Target Start/End: Complemental strand, 31493982 - 31493889
Alignment:
Q  230 accagatgcatatagtctcatttcatgtgcatcctttgctgtcacggcgcttagtttgtcgaggaacaaaactcaatgcggatttgaaatcgatctt 326  Q
    |||||||||||||||||| ||  |||||||  |||||||| ||| | ||||||| ||||||||   | ||| ||| |||||||||||| ||||||||    
T  31493982 accagatgcatatagtctaataacatgtgctgcctttgctatcatgtcgcttagcttgtcgag---ccaaattcagtgcggatttgaagtcgatctt 31493889  T

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Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 328
Target Start/End: Original strand, 31317599 - 31317694
Alignment:
Q  230 accagatgcatatagtctcatttcatgtgcatcctttgctgtcacggcgcttagtttgtcgaggaacaaaactcaatgcggatttgaaatcgatcttct 328  Q
    |||||||||||||||| | |||||||||||  |||||||| | | | | ||||||||||| |||    ||||||| || ||||||||||| ||||||||    
T  31317599 accagatgcatatagtttaatttcatgtgctgcctttgctattatgtcacttagtttgtcaagg---caaactcagtggggatttgaaattgatcttct 31317694  T

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