View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20196_high_1 (Length: 716)

Name: NF20196_high_1
Description: NF20196
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20196_high_1
NF20196_high_1
[»] chr1 (78 HSPs)
chr1 (18-699)||(49888239-49888924)
chr1 (529-611)||(34952185-34952267)
chr1 (498-611)||(37842373-37842485)
chr1 (498-605)||(1432455-1432561)
chr1 (541-616)||(51695508-51695583)
chr1 (496-601)||(7069238-7069343)
chr1 (529-604)||(7218099-7218174)
chr1 (496-598)||(23544670-23544772)
chr1 (480-611)||(7472234-7472363)
chr1 (500-616)||(27820350-27820464)
chr1 (546-613)||(7137014-7137081)
chr1 (539-602)||(7244685-7244748)
chr1 (529-604)||(24915076-24915151)
chr1 (529-595)||(25006068-25006134)
chr1 (541-611)||(25479563-25479633)
chr1 (529-611)||(34290206-34290288)
chr1 (532-598)||(37295749-37295815)
chr1 (502-594)||(5421955-5422046)
chr1 (552-612)||(26946464-26946524)
chr1 (534-594)||(27976570-27976630)
chr1 (532-604)||(29793755-29793827)
chr1 (529-604)||(473134-473209)
chr1 (541-604)||(3234040-3234103)
chr1 (499-604)||(10744249-10744346)
chr1 (529-616)||(14576667-14576753)
chr1 (529-616)||(31517753-31517840)
chr1 (529-611)||(10809315-10809397)
chr1 (529-611)||(33204406-33204488)
chr1 (546-616)||(45975677-45975747)
chr1 (529-605)||(5592709-5592785)
chr1 (546-611)||(23902085-23902150)
chr1 (532-613)||(38018380-38018461)
chr1 (539-611)||(2777872-2777944)
chr1 (529-605)||(13809968-13810044)
chr1 (544-611)||(3924609-3924676)
chr1 (564-611)||(12564517-12564564)
chr1 (472-577)||(36070167-36070268)
chr1 (497-604)||(36151530-36151636)
chr1 (546-605)||(37241846-37241905)
chr1 (503-610)||(37517213-37517319)
chr1 (529-611)||(10199426-10199508)
chr1 (529-611)||(10799432-10799514)
chr1 (496-582)||(17269188-17269273)
chr1 (543-605)||(25005821-25005883)
chr1 (558-604)||(26779950-26779996)
chr1 (503-604)||(38882937-38883035)
chr1 (566-616)||(41195206-41195256)
chr1 (546-604)||(49938734-49938792)
chr1 (499-596)||(9572141-9572237)
chr1 (542-611)||(12287210-12287279)
chr1 (545-611)||(28689470-28689538)
chr1 (529-582)||(37841968-37842021)
chr1 (503-616)||(47432041-47432152)
chr1 (529-605)||(9656620-9656696)
chr1 (544-584)||(12564919-12564959)
chr1 (496-560)||(15687142-15687205)
chr1 (541-589)||(23445316-23445364)
chr1 (529-581)||(27738228-27738280)
chr1 (503-611)||(34795443-34795550)
chr1 (528-612)||(40394903-40394986)
chr1 (497-610)||(4256062-4256173)
chr1 (544-611)||(8130421-8130488)
chr1 (544-603)||(15515526-15515585)
chr1 (573-616)||(27820209-27820252)
chr1 (472-561)||(34619446-34619531)
chr1 (544-611)||(35590910-35590977)
chr1 (541-616)||(37631572-37631647)
chr1 (541-604)||(39596579-39596642)
chr1 (545-604)||(42174841-42174900)
chr1 (541-611)||(6279381-6279451)
chr1 (535-605)||(6556947-6557017)
chr1 (546-616)||(35179126-35179196)
chr1 (496-601)||(836367-836471)
chr1 (552-605)||(3224416-3224469)
chr1 (536-573)||(11218001-11218038)
chr1 (500-581)||(38578469-38578549)
chr1 (544-605)||(44422684-44422745)
chr1 (500-585)||(49517012-49517096)
[»] chr5 (64 HSPs)
chr5 (496-616)||(39105402-39105521)
chr5 (496-604)||(12425509-12425616)
chr5 (496-605)||(9202772-9202880)
chr5 (530-605)||(6587131-6587206)
chr5 (498-616)||(4014437-4014554)
chr5 (541-611)||(10272449-10272519)
chr5 (496-604)||(11700100-11700208)
chr5 (503-605)||(7319032-7319136)
chr5 (496-611)||(7674586-7674700)
chr5 (532-610)||(7319379-7319457)
chr5 (529-605)||(2568627-2568704)
chr5 (496-605)||(42582850-42582958)
chr5 (544-604)||(28776978-28777038)
chr5 (503-611)||(39594753-39594859)
chr5 (502-605)||(10639897-10639999)
chr5 (529-604)||(41957476-41957551)
chr5 (546-604)||(15246820-15246878)
chr5 (546-616)||(15557260-15557330)
chr5 (530-611)||(25461062-25461143)
chr5 (496-616)||(6593238-6593356)
chr5 (496-611)||(1465038-1465151)
chr5 (497-611)||(12460019-12460131)
chr5 (532-611)||(42569731-42569810)
chr5 (546-604)||(15309018-15309076)
chr5 (546-616)||(36318761-36318831)
chr5 (555-616)||(7984965-7985026)
chr5 (529-616)||(11064400-11064489)
chr5 (503-604)||(29925786-29925886)
chr5 (496-561)||(42569048-42569112)
chr5 (496-616)||(4855636-4855755)
chr5 (552-600)||(32942611-32942659)
chr5 (552-600)||(34117565-34117613)
chr5 (529-605)||(41981889-41981965)
chr5 (558-610)||(43300877-43300929)
chr5 (496-559)||(465892-465954)
chr5 (541-584)||(5559707-5559750)
chr5 (541-596)||(12975329-12975384)
chr5 (544-611)||(17368661-17368728)
chr5 (529-600)||(32009662-32009733)
chr5 (529-600)||(32372594-32372665)
chr5 (529-611)||(32703294-32703374)
chr5 (496-611)||(34160669-34160783)
chr5 (541-604)||(35445868-35445931)
chr5 (545-616)||(37588373-37588444)
chr5 (529-595)||(12595774-12595840)
chr5 (563-605)||(24030425-24030467)
chr5 (552-606)||(34245717-34245771)
chr5 (569-611)||(38104875-38104917)
chr5 (529-603)||(40119894-40119968)
chr5 (529-611)||(40731439-40731521)
chr5 (544-610)||(41016164-41016230)
chr5 (551-593)||(41016569-41016611)
chr5 (541-582)||(5946726-5946767)
chr5 (530-602)||(14674927-14675000)
chr5 (541-610)||(17560433-17560502)
chr5 (541-611)||(19138735-19138807)
chr5 (539-616)||(25461329-25461406)
chr5 (541-594)||(31038276-31038329)
chr5 (541-594)||(31047500-31047553)
chr5 (543-612)||(32172637-32172706)
chr5 (565-614)||(32545040-32545089)
chr5 (546-611)||(36325998-36326063)
chr5 (530-611)||(42583120-42583201)
chr5 (529-598)||(42646885-42646954)
[»] chr6 (43 HSPs)
chr6 (496-611)||(9093574-9093688)
chr6 (503-605)||(6909896-6909998)
chr6 (536-612)||(837233-837309)
chr6 (529-616)||(2735039-2735126)
chr6 (529-604)||(20368205-20368280)
chr6 (504-613)||(29296311-29296417)
chr6 (534-611)||(836559-836636)
chr6 (478-613)||(4006637-4006768)
chr6 (504-604)||(35098981-35099082)
chr6 (529-596)||(415274-415341)
chr6 (528-611)||(26694847-26694930)
chr6 (500-603)||(31624200-31624302)
chr6 (541-616)||(34430474-34430549)
chr6 (547-613)||(13907573-13907639)
chr6 (529-611)||(31671092-31671174)
chr6 (551-605)||(31812037-31812091)
chr6 (496-577)||(29274281-29274361)
chr6 (567-611)||(835267-835311)
chr6 (497-589)||(20671905-20671996)
chr6 (496-615)||(25099980-25100099)
chr6 (529-611)||(281866-281948)
chr6 (529-611)||(2112171-2112252)
chr6 (566-604)||(6647394-6647432)
chr6 (497-603)||(10400208-10400313)
chr6 (497-611)||(27893986-27894098)
chr6 (497-611)||(33787763-33787876)
chr6 (539-604)||(6536595-6536660)
chr6 (530-579)||(7485118-7485167)
chr6 (503-584)||(24626240-24626320)
chr6 (529-611)||(34910427-34910511)
chr6 (496-604)||(9559567-9559673)
chr6 (551-611)||(19800454-19800514)
chr6 (529-605)||(28621134-28621210)
chr6 (530-582)||(33828617-33828669)
chr6 (504-595)||(1402942-1403032)
chr6 (544-599)||(31327638-31327693)
chr6 (530-616)||(8364989-8365075)
chr6 (497-605)||(24836226-24836330)
chr6 (554-604)||(31624085-31624135)
chr6 (541-611)||(32386581-32386651)
chr6 (574-611)||(160970-161007)
chr6 (565-614)||(2205605-2205654)
chr6 (552-589)||(2727896-2727933)
[»] chr3 (76 HSPs)
chr3 (528-616)||(21367636-21367724)
chr3 (500-605)||(44061047-44061151)
chr3 (496-604)||(39602235-39602341)
chr3 (503-596)||(30956659-30956751)
chr3 (503-596)||(30972471-30972563)
chr3 (529-605)||(14145882-14145958)
chr3 (496-616)||(402555-402673)
chr3 (505-605)||(2719416-2719514)
chr3 (496-602)||(34637998-34638097)
chr3 (529-611)||(33405184-33405267)
chr3 (502-589)||(36646422-36646508)
chr3 (503-605)||(21335620-21335721)
chr3 (546-603)||(22203417-22203474)
chr3 (503-616)||(35959469-35959581)
chr3 (504-616)||(36631064-36631175)
chr3 (497-616)||(36783347-36783466)
chr3 (546-605)||(18405855-18405914)
chr3 (564-611)||(33883768-33883815)
chr3 (534-616)||(28622012-28622094)
chr3 (496-616)||(30573927-30574044)
chr3 (503-616)||(53789474-53789586)
chr3 (503-611)||(3845580-3845687)
chr3 (529-605)||(20170732-20170808)
chr3 (553-617)||(50600190-50600254)
chr3 (529-604)||(1217825-1217900)
chr3 (496-611)||(21661452-21661566)
chr3 (529-616)||(30443863-30443950)
chr3 (568-611)||(34924556-34924599)
chr3 (568-611)||(44488892-44488935)
chr3 (551-610)||(44747427-44747486)
chr3 (536-603)||(46886718-46886785)
chr3 (503-605)||(583991-584092)
chr3 (529-611)||(1816553-1816635)
chr3 (529-595)||(10101510-10101576)
chr3 (529-595)||(10212435-10212501)
chr3 (529-611)||(34610824-34610906)
chr3 (543-616)||(22214672-22214745)
chr3 (563-616)||(26990504-26990557)
chr3 (498-603)||(36189506-36189610)
chr3 (531-604)||(39980701-39980774)
chr3 (500-605)||(51510217-51510321)
chr3 (528-600)||(20257504-20257576)
chr3 (535-603)||(20669595-20669663)
chr3 (503-611)||(24684841-24684948)
chr3 (568-612)||(25075075-25075119)
chr3 (508-584)||(25447289-25447364)
chr3 (563-611)||(36887508-36887556)
chr3 (529-581)||(37788830-37788882)
chr3 (530-605)||(50952304-50952379)
chr3 (533-604)||(5436233-5436304)
chr3 (529-616)||(10357403-10357490)
chr3 (541-596)||(12862281-12862335)
chr3 (529-604)||(20170493-20170568)
chr3 (573-616)||(28795866-28795909)
chr3 (529-584)||(37795566-37795621)
chr3 (541-616)||(45541553-45541628)
chr3 (541-604)||(47132313-47132376)
chr3 (549-600)||(49092769-49092820)
chr3 (563-605)||(2825151-2825193)
chr3 (545-611)||(14548739-14548805)
chr3 (566-616)||(20669179-20669229)
chr3 (535-605)||(20880452-20880522)
chr3 (553-611)||(24085356-24085414)
chr3 (528-574)||(35450559-35450605)
chr3 (566-604)||(37273141-37273179)
chr3 (497-611)||(38462220-38462333)
chr3 (543-581)||(41057022-41057060)
chr3 (496-616)||(46030926-46031047)
chr3 (550-604)||(47319296-47319350)
chr3 (568-605)||(466202-466239)
chr3 (564-605)||(8933792-8933833)
chr3 (566-611)||(12985363-12985408)
chr3 (496-605)||(31403296-31403404)
chr3 (544-605)||(42733961-42734022)
chr3 (496-605)||(49465689-49465795)
chr3 (542-611)||(54837052-54837121)
[»] chr2 (80 HSPs)
chr2 (476-616)||(18066049-18066185)
chr2 (497-611)||(42457887-42458000)
chr2 (530-611)||(1625871-1625952)
chr2 (503-616)||(12464486-12464598)
chr2 (529-616)||(11513868-11513955)
chr2 (529-614)||(40279167-40279252)
chr2 (496-616)||(9174752-9174872)
chr2 (521-603)||(26626835-26626917)
chr2 (541-611)||(680485-680555)
chr2 (500-613)||(26143656-26143769)
chr2 (531-605)||(41851507-41851581)
chr2 (503-616)||(45229457-45229568)
chr2 (541-605)||(22681209-22681273)
chr2 (546-614)||(43985018-43985086)
chr2 (541-604)||(656802-656865)
chr2 (529-611)||(8017404-8017486)
chr2 (526-584)||(9750913-9750971)
chr2 (546-616)||(18179253-18179323)
chr2 (529-611)||(29316793-29316875)
chr2 (546-616)||(39983329-39983399)
chr2 (496-605)||(3611164-3611272)
chr2 (542-611)||(29628761-29628830)
chr2 (503-604)||(32592532-32592631)
chr2 (503-616)||(41241145-41241257)
chr2 (528-602)||(42907328-42907404)
chr2 (496-616)||(2416251-2416370)
chr2 (496-584)||(3673745-3673832)
chr2 (496-616)||(5133710-5133829)
chr2 (529-605)||(6167307-6167383)
chr2 (532-583)||(423552-423603)
chr2 (529-604)||(12313198-12313273)
chr2 (552-611)||(29510585-29510644)
chr2 (529-616)||(33942120-33942207)
chr2 (542-613)||(35378548-35378619)
chr2 (547-613)||(1893297-1893363)
chr2 (566-616)||(33319825-33319875)
chr2 (565-611)||(35993398-35993444)
chr2 (543-605)||(41875677-41875739)
chr2 (544-605)||(750656-750716)
chr2 (499-616)||(9395071-9395187)
chr2 (566-611)||(35379034-35379079)
chr2 (496-605)||(36114357-36114465)
chr2 (563-604)||(40279411-40279452)
chr2 (529-582)||(43199384-43199437)
chr2 (500-605)||(43570356-43570460)
chr2 (534-611)||(43911017-43911094)
chr2 (568-604)||(10646314-10646350)
chr2 (529-616)||(15757671-15757759)
chr2 (529-605)||(17221564-17221640)
chr2 (541-577)||(23143030-23143066)
chr2 (541-577)||(23554820-23554856)
chr2 (497-577)||(35755554-35755633)
chr2 (552-604)||(36863650-36863702)
chr2 (563-611)||(40279271-40279319)
chr2 (563-611)||(40279341-40279389)
chr2 (529-584)||(914051-914106)
chr2 (496-611)||(4026755-4026869)
chr2 (530-581)||(5759623-5759674)
chr2 (549-604)||(9477942-9477997)
chr2 (496-571)||(25609734-25609808)
chr2 (541-584)||(25800811-25800854)
chr2 (541-604)||(33941891-33941954)
chr2 (546-604)||(938535-938593)
chr2 (541-611)||(1810647-1810716)
chr2 (496-594)||(3102631-3102728)
chr2 (566-604)||(10884546-10884584)
chr2 (526-604)||(31096268-31096346)
chr2 (529-603)||(37292373-37292447)
chr2 (553-611)||(44590028-44590086)
chr2 (529-605)||(2142623-2142700)
chr2 (572-605)||(4606938-4606971)
chr2 (529-582)||(5043607-5043660)
chr2 (552-605)||(6993748-6993801)
chr2 (529-605)||(7103506-7103583)
chr2 (547-604)||(10285848-10285905)
chr2 (546-603)||(16353848-16353905)
chr2 (529-582)||(29300615-29300668)
chr2 (544-605)||(37474741-37474802)
chr2 (531-604)||(39659534-39659607)
chr2 (529-570)||(43199852-43199893)
[»] chr8 (58 HSPs)
chr8 (496-611)||(10114428-10114541)
chr8 (526-616)||(8062491-8062581)
chr8 (535-616)||(27028807-27028888)
chr8 (496-611)||(9956832-9956944)
chr8 (500-611)||(3537047-3537159)
chr8 (497-603)||(4558737-4558842)
chr8 (496-605)||(27754341-27754450)
chr8 (499-616)||(16210899-16211015)
chr8 (529-616)||(21653051-21653138)
chr8 (549-616)||(31862483-31862550)
chr8 (541-616)||(43504733-43504808)
chr8 (529-611)||(2595015-2595097)
chr8 (529-611)||(7918791-7918873)
chr8 (535-589)||(24558829-24558883)
chr8 (507-605)||(42043369-42043466)
chr8 (496-581)||(7514516-7514600)
chr8 (503-616)||(12976158-12976269)
chr8 (503-604)||(26771210-26771310)
chr8 (530-603)||(37353275-37353348)
chr8 (563-616)||(38307666-38307719)
chr8 (551-611)||(8062321-8062381)
chr8 (498-582)||(31884534-31884617)
chr8 (529-589)||(34770862-34770922)
chr8 (529-616)||(35534626-35534711)
chr8 (541-584)||(9834834-9834877)
chr8 (529-616)||(10758270-10758356)
chr8 (552-611)||(30389092-30389151)
chr8 (541-616)||(38874628-38874703)
chr8 (529-611)||(11376673-11376755)
chr8 (530-604)||(27049338-27049411)
chr8 (500-602)||(30627929-30628030)
chr8 (529-599)||(31804484-31804554)
chr8 (496-578)||(42597339-42597420)
chr8 (529-602)||(900725-900796)
chr8 (496-605)||(3936787-3936895)
chr8 (563-604)||(26473777-26473818)
chr8 (529-611)||(36338280-36338364)
chr8 (530-599)||(38648322-38648391)
chr8 (546-602)||(11861791-11861847)
chr8 (543-611)||(12851160-12851228)
chr8 (497-616)||(7646145-7646263)
chr8 (536-611)||(10120733-10120808)
chr8 (553-616)||(14247237-14247300)
chr8 (496-611)||(28769357-28769471)
chr8 (563-602)||(35749597-35749636)
chr8 (566-613)||(44236839-44236886)
chr8 (467-531)||(1929963-1930024)
chr8 (544-618)||(7714227-7714301)
chr8 (530-616)||(25930567-25930653)
chr8 (498-588)||(27728062-27728151)
chr8 (552-614)||(30013211-30013273)
chr8 (546-596)||(32841341-32841391)
chr8 (529-611)||(42215100-42215181)
chr8 (529-599)||(42237452-42237522)
chr8 (529-614)||(6509318-6509403)
chr8 (555-616)||(6966881-6966942)
chr8 (568-605)||(10075575-10075612)
chr8 (496-561)||(14280469-14280533)
[»] chr7 (69 HSPs)
chr7 (495-611)||(20881654-20881769)
chr7 (529-616)||(39907773-39907860)
chr7 (529-604)||(39967890-39967965)
chr7 (529-603)||(12110330-12110404)
chr7 (500-605)||(47177578-47177682)
chr7 (497-616)||(34743968-34744085)
chr7 (529-616)||(22283757-22283844)
chr7 (496-604)||(17248491-17248598)
chr7 (507-605)||(40689010-40689107)
chr7 (496-605)||(27548201-27548309)
chr7 (565-605)||(33552874-33552914)
chr7 (541-605)||(38010696-38010760)
chr7 (504-611)||(48507667-48507775)
chr7 (529-604)||(420330-420405)
chr7 (472-611)||(28613552-28613690)
chr7 (529-616)||(33601423-33601509)
chr7 (529-603)||(30456476-30456550)
chr7 (472-616)||(30535480-30535620)
chr7 (530-604)||(44821930-44822004)
chr7 (529-603)||(47046134-47046208)
chr7 (552-613)||(2825247-2825308)
chr7 (502-611)||(45790443-45790551)
chr7 (541-605)||(30812130-30812194)
chr7 (532-616)||(46280285-46280369)
chr7 (541-604)||(5569661-5569724)
chr7 (497-576)||(30496643-30496721)
chr7 (533-604)||(33678754-33678825)
chr7 (541-603)||(4970819-4970881)
chr7 (563-605)||(48917370-48917412)
chr7 (530-611)||(17944361-17944442)
chr7 (541-598)||(18350738-18350795)
chr7 (496-585)||(36874009-36874097)
chr7 (530-611)||(37064482-37064563)
chr7 (555-604)||(40530434-40530483)
chr7 (544-605)||(46104326-46104387)
chr7 (563-604)||(47130810-47130851)
chr7 (503-603)||(119855-119954)
chr7 (529-605)||(20526416-20526492)
chr7 (551-611)||(27863743-27863803)
chr7 (568-616)||(36517588-36517636)
chr7 (500-616)||(37832154-37832267)
chr7 (541-605)||(39393602-39393665)
chr7 (529-605)||(40252131-40252207)
chr7 (544-604)||(43648225-43648285)
chr7 (529-580)||(1417234-1417285)
chr7 (544-611)||(3610758-3610825)
chr7 (529-616)||(5947155-5947241)
chr7 (529-604)||(15309590-15309665)
chr7 (557-604)||(19022610-19022657)
chr7 (565-604)||(34035923-34035962)
chr7 (528-603)||(37064246-37064324)
chr7 (553-604)||(44178950-44179001)
chr7 (530-600)||(7241361-7241431)
chr7 (570-616)||(8690411-8690457)
chr7 (541-595)||(28340878-28340932)
chr7 (529-571)||(30180021-30180063)
chr7 (541-611)||(33602045-33602114)
chr7 (503-605)||(48469989-48470090)
chr7 (494-576)||(1432017-1432101)
chr7 (529-610)||(5628585-5628666)
chr7 (566-611)||(7244687-7244732)
chr7 (566-611)||(9050642-9050687)
chr7 (541-610)||(14768105-14768174)
chr7 (543-612)||(21453278-21453347)
chr7 (530-603)||(40377878-40377951)
chr7 (532-605)||(43694594-43694667)
chr7 (530-611)||(45264066-45264147)
chr7 (552-605)||(46104591-46104644)
chr7 (566-611)||(47559619-47559664)
[»] scaffold0018 (1 HSPs)
scaffold0018 (529-611)||(178343-178425)
[»] chr4 (74 HSPs)
chr4 (542-604)||(35571656-35571718)
chr4 (498-611)||(3155543-3155655)
chr4 (499-611)||(17884009-17884120)
chr4 (530-616)||(53294127-53294213)
chr4 (496-604)||(54392844-54392950)
chr4 (496-604)||(1706560-1706667)
chr4 (529-605)||(17822889-17822965)
chr4 (496-584)||(25885797-25885884)
chr4 (529-605)||(27043854-27043930)
chr4 (496-614)||(437447-437565)
chr4 (529-611)||(47118983-47119065)
chr4 (501-611)||(49219082-49219191)
chr4 (529-611)||(51630081-51630163)
chr4 (507-611)||(22666437-22666541)
chr4 (503-604)||(55414445-55414545)
chr4 (539-603)||(8468928-8468992)
chr4 (544-616)||(30207584-30207656)
chr4 (496-612)||(44138497-44138612)
chr4 (542-602)||(49940018-49940078)
chr4 (500-605)||(1203140-1203245)
chr4 (497-604)||(49202584-49202690)
chr4 (496-605)||(8422863-8422969)
chr4 (541-611)||(20031731-20031801)
chr4 (529-611)||(42685394-42685476)
chr4 (533-611)||(50004162-50004240)
chr4 (529-603)||(56480318-56480392)
chr4 (544-605)||(16200005-16200066)
chr4 (507-611)||(22661958-22662062)
chr4 (529-602)||(32421075-32421148)
chr4 (499-616)||(44319891-44320006)
chr4 (498-610)||(52315216-52315327)
chr4 (496-600)||(7601697-7601800)
chr4 (503-603)||(9760385-9760484)
chr4 (528-604)||(28300324-28300400)
chr4 (541-605)||(29778777-29778841)
chr4 (544-616)||(36048518-36048590)
chr4 (496-598)||(2733258-2733360)
chr4 (541-604)||(2996555-2996618)
chr4 (551-610)||(42121480-42121539)
chr4 (563-610)||(55084500-55084547)
chr4 (529-611)||(24929463-24929545)
chr4 (530-611)||(25332745-25332827)
chr4 (496-604)||(40174503-40174608)
chr4 (529-603)||(50681115-50681189)
chr4 (565-603)||(51044506-51044544)
chr4 (566-611)||(29601026-29601071)
chr4 (506-611)||(29912897-29913000)
chr4 (567-611)||(825508-825552)
chr4 (496-616)||(6364087-6364206)
chr4 (563-611)||(11158375-11158423)
chr4 (558-605)||(2111074-2111121)
chr4 (541-616)||(19395129-19395204)
chr4 (566-601)||(25950746-25950781)
chr4 (573-616)||(28614821-28614864)
chr4 (549-616)||(35507470-35507537)
chr4 (529-584)||(52746885-52746940)
chr4 (499-599)||(55437029-55437127)
chr4 (530-605)||(679225-679298)
chr4 (563-605)||(4798590-4798632)
chr4 (496-602)||(23503497-23503602)
chr4 (529-603)||(26883965-26884039)
chr4 (529-611)||(29263340-29263422)
chr4 (496-605)||(30338615-30338724)
chr4 (567-613)||(32421275-32421321)
chr4 (541-614)||(45214353-45214426)
chr4 (529-575)||(47946168-47946214)
chr4 (531-604)||(10192256-10192328)
chr4 (575-616)||(13126589-13126630)
chr4 (552-589)||(16494845-16494882)
chr4 (542-611)||(30066784-30066853)
chr4 (552-605)||(42866061-42866114)
chr4 (566-611)||(47800630-47800675)
chr4 (531-600)||(50298499-50298568)
chr4 (566-611)||(53673676-53673721)
[»] scaffold0024 (2 HSPs)
scaffold0024 (496-603)||(21311-21410)
scaffold0024 (496-584)||(27514-27601)
[»] scaffold0475 (1 HSPs)
scaffold0475 (526-570)||(11814-11858)
[»] scaffold0100 (1 HSPs)
scaffold0100 (547-581)||(42604-42638)
[»] scaffold0528 (1 HSPs)
scaffold0528 (541-594)||(1007-1060)
[»] scaffold0167 (1 HSPs)
scaffold0167 (558-595)||(17275-17312)
[»] scaffold0003 (1 HSPs)
scaffold0003 (563-616)||(306330-306383)


Alignment Details
Target: chr1 (Bit Score: 558; Significance: 0; HSPs: 78)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 558; E-Value: 0
Query Start/End: Original strand, 18 - 699
Target Start/End: Original strand, 49888239 - 49888924
Alignment:
Q  18 atattcatctcaattaatgtatgaagcaaaaacaagacagatattagataggaagtgtcaaaatgaaacatacatcaatatcgtcatcactgaacttcag 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  49888239 atattcatctcaattaatgtatgaagcaaaaacaagacagatattagataggaagtgtcaaaatgaaacatacatcaatatcgtcatcactgaacttaag 49888338  T
Q  118 cagatccgggtcattctctttcaagtactcataaaaatcttcgtcctgcaatggaaaaggttgttaataacattgctaacagaatgtagcccaataaata 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49888339 cagatccgggtcattctctttcaagtactcataaaaatcttcgtcctgcaatggaaaaggttgttaataacattgctaacagaatgtagcccaataaata 49888438  T
Q  218 tataaaaggcaatttcctatcaaccaccacctagttcaaatttcacacatacaagcatttgaaatgcgaattaaattatcaaaaccttcactaaaacctt 317  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                
T  49888439 tataaaaggcaatttcctatcaaccaccacctagttcaaatttcacacatacaagcatttgaaatgcgaattaaattatcaaaacctt------------ 49888526  T
Q  318 tacttgccttagtctaagtctaccctatggacatgcaatatgtctaatttctctaataaaattatacaagggcagacggcctagagataaacattgcttg 417  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49888527 tacttgtcttagtctacgtctaccctatggacatgcaatatgtctaatttctctaataaaattatacaagggcagacggcctagagataaacattgcttg 49888626  T
Q  418 aaacgacaaaacttatatttagctattaaggccctgtttggacaagtggcttacttgcagcttatagcataagtgcttcttatgtataagctatttctat 517  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  49888627 aaacgacaaaacttatatttagctattaaggccctgtttggacaagtggcttacttgcagcttatagcataagtgcttcttatgtataagctatttcttt 49888726  T
Q  518 ggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaatagctc 617  Q
    ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49888727 ggaaaaagataaaa-taaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaatagctc 49888825  T
Q  618 agacgtttaaataaaacttaagtaaccatataagc-----------------acggaccctaaattaaagagaatcctacaaataagaacaagcaaagt 699  Q
    |||| ||||||||||||||||||||| ||||||||                 ||||||||| ||||||||||||||||||||| |||||||||||||||    
T  49888826 agacatttaaataaaacttaagtaacaatataagctgaataagtcaatccaaacggaccctgaattaaagagaatcctacaaaaaagaacaagcaaagt 49888924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 529 - 611
Target Start/End: Original strand, 34952185 - 34952267
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    ||||||||||| ||||||||||| ||||||| | ||||||||||||||||||||  ||||||||||||||||||||| |||||    
T  34952185 aaaataaagttaaattgttttcgaataagctgtaagttgttttcataagctatcaaagagaacttatgaaaataagctgaaaa 34952267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 498 - 611
Target Start/End: Complemental strand, 37842485 - 37842373
Alignment:
Q  498 tatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatga 597  Q
    |||||||||||||||||||| | |||| || ||| ||||||| || ||| |||| ||||||||| ||||||||||||||||||||||  ||||||||| |    
T  37842485 tatgtataagctatttctatagcaaaagatgaaa-taaagttaaactgtgttcgaataagctataagttgttttcataagctatcttgaagaacttataa 37842387  T
Q  598 aaataagccgaaaa 611  Q
    |||||||| |||||    
T  37842386 aaataagctgaaaa 37842373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 498 - 605
Target Start/End: Original strand, 1432455 - 1432561
Alignment:
Q  498 tatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatga 597  Q
    |||||||||||||||||||| | |||| |||||| || |||| |||||||||  |||||||||| | |||||||||||| ||||||| ||||||||||||    
T  1432455 tatgtataagctatttctatagtaaaagataaaa-tagagttcaattgtttttttataagctataaattgttttcataaactatcttggagaacttatga 1432553  T
Q  598 aaataagc 605  Q
    || |||||    
T  1432554 aagtaagc 1432561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 541 - 616
Target Start/End: Complemental strand, 51695583 - 51695508
Alignment:
Q  541 aattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaatagct 616  Q
    ||||||||||||||||| ||| || ||||||||||||||||||| ||||| |||||||||||||| ||||||||||    
T  51695583 aattgttttcgtataagttatcagatgttttcataagctatcttggagaatttatgaaaataagctgaaaatagct 51695508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 496 - 601
Target Start/End: Original strand, 7069238 - 7069343
Alignment:
Q  496 cttatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttat 595  Q
    |||| |||||||||||| |||| | |||| ||||||| ||| || ||||||||||||||||||||| || || |||  ||||||||||| ||||||||||    
T  7069238 cttaagtataagctattactatagcaaaagataaaaaaaaaattgaattgttttcgtataagctataagctgcttttgtaagctatcttggagaacttat 7069337  T
Q  596 gaaaat 601  Q
    ||||||    
T  7069338 gaaaat 7069343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 529 - 604
Target Start/End: Complemental strand, 7218174 - 7218099
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataag 604  Q
    ||||||||||  |||||||||| |||||||||| |||||||||||||| ||||| | |||||||||||||||||||    
T  7218174 aaaataaagtcaaattgttttcatataagctataagttgttttcataacctatcctggagaacttatgaaaataag 7218099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 496 - 598
Target Start/End: Complemental strand, 23544772 - 23544670
Alignment:
Q  496 cttatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctatt-agttgttttcataagctatcttagagaactta 594  Q
    ||||||||||||||||||||||||||||| || ||||| ||||  |||||||||| ||||||||||| |  ||||||||||||||||||  || ||||||    
T  23544772 cttatgtataagctatttctatggaaaaagat-aaaattaagtcaaattgttttcatataagctattaaactgttttcataagctatctcggaaaactta 23544674  T
Q  595 tgaa 598  Q
    ||||    
T  23544673 tgaa 23544670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 480 - 611
Target Start/End: Original strand, 7472234 - 7472363
Alignment:
Q  480 tatagcataagtgcttcttatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagct 579  Q
    |||| ||||||||| | |||| ||||||||||||||||   |||| ||| ||   ||||| ||||||||| |||||| |||| || ||||| ||||||||    
T  7472234 tatatcataagtgcctattatttataagctatttctataacaaaagatataat--aagttaaattgtttttgtataatctataagctgtttccataagct 7472331  T
Q  580 atcttagagaacttatgaaaataagccgaaaa 611  Q
    ||||| |||| ||||||||||||||| |||||    
T  7472332 atcttggagagcttatgaaaataagctgaaaa 7472363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 500 - 616
Target Start/End: Complemental strand, 27820464 - 27820350
Alignment:
Q  500 tgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaa 599  Q
    |||||||||||||| ||| | ||| ||||||| ||||| | ||||||||  |||||||||||  | |||||| |||||||||||| ||||| ||||||||    
T  27820464 tgtataagctatttttatagtaaa-tataaaa-taaagctaaattgtttatgtataagctatatgctgtttttataagctatcttggagaatttatgaaa 27820367  T
Q  600 ataagccgaaaatagct 616  Q
    |||||| ||||||||||    
T  27820366 ataagctgaaaatagct 27820350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 546 - 613
Target Start/End: Complemental strand, 7137081 - 7137014
Alignment:
Q  546 ttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaata 613  Q
    |||| |||||| |||| || ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  7137081 tttttgtataatctataagctgttttcataagctatcttggagaacttatgaaaataagctgaaaata 7137014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 539 - 602
Target Start/End: Complemental strand, 7244748 - 7244685
Alignment:
Q  539 ttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaata 602  Q
    |||||||||||||||||||||||  ||||||||||||||| ||||| |||||| ||||||||||    
T  7244748 ttaattgttttcgtataagctatacgttgttttcataagcgatcttggagaacgtatgaaaata 7244685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 529 - 604
Target Start/End: Complemental strand, 24915151 - 24915076
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataag 604  Q
    ||||||||||| ||||||||| ||||| ||||| || |||||||||||||| |||| |||||||| ||||||||||    
T  24915151 aaaataaagttaaattgtttttgtatatgctataagctgttttcataagctgtcttggagaacttgtgaaaataag 24915076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 529 - 595
Target Start/End: Complemental strand, 25006134 - 25006068
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttat 595  Q
    ||||||||||  |||||||||| |||||||||| |||||||||||||||||||||| |||| |||||    
T  25006134 aaaataaagtcaaattgttttcatataagctataagttgttttcataagctatcttggagatcttat 25006068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 541 - 611
Target Start/End: Original strand, 25479563 - 25479633
Alignment:
Q  541 aattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    |||||| ||| |||| ||||| |||||||||||||||||||| |||||| ||||||||||||||| |||||    
T  25479563 aattgtcttcatataggctataagttgttttcataagctatcctagagagcttatgaaaataagctgaaaa 25479633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 529 - 611
Target Start/End: Original strand, 34290206 - 34290288
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    ||||||||||| | ||  ||| ||||||||||| || |||||||||||||||||||  ||||||||||||||||||| |||||    
T  34290206 aaaataaagttaattttattttgtataagctataagctgttttcataagctatcttgaagaacttatgaaaataagctgaaaa 34290288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 532 - 598
Target Start/End: Complemental strand, 37295815 - 37295749
Alignment:
Q  532 ataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaa 598  Q
    |||||||| |||||||||||| |||||||| |||||||||||||| |||||||||| ||| ||||||    
T  37295815 ataaagttaaattgttttcgtttaagctataagttgttttcataacctatcttagaaaacgtatgaa 37295749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 502 - 594
Target Start/End: Complemental strand, 5422046 - 5421955
Alignment:
Q  502 tataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaactta 594  Q
    ||||||||||||| |||  |||| |||||| || |||  |||||||||| |||||||||| ||||||||| ||||||||||||||||| ||||    
T  5422046 tataagctatttccatgacaaaagataaaa-tatagtcaaattgttttcttataagctataagttgttttgataagctatcttagagagctta 5421955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 552 - 612
Target Start/End: Complemental strand, 26946524 - 26946464
Alignment:
Q  552 tataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaat 612  Q
    |||||||||| ||| |||||||||||||||||||||||| | |||||||||||| ||||||    
T  26946524 tataagctataagtcgttttcataagctatcttagagaagtcatgaaaataagctgaaaat 26946464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 534 - 594
Target Start/End: Original strand, 27976570 - 27976630
Alignment:
Q  534 aaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaactta 594  Q
    |||||| ||||||||| ||||| ||||| |||||||||||||||||||||| |||||||||    
T  27976570 aaagttaaattgtttttgtatatgctataagttgttttcataagctatcttcgagaactta 27976630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 532 - 604
Target Start/End: Original strand, 29793755 - 29793827
Alignment:
Q  532 ataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataag 604  Q
    |||||||| | ||||||||||||||||||| |||||  ||||||||||||||| |||| ||||||||| ||||    
T  29793755 ataaagttaagttgttttcgtataagctataagttgagttcataagctatcttcgagagcttatgaaactaag 29793827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 529 - 604
Target Start/End: Original strand, 473134 - 473209
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataag 604  Q
    ||||||||||| |||||||||||| || ||||| ||||||||| ||||| | | || |||||||||||||||||||    
T  473134 aaaataaagttaaattgttttcgtgtatgctataagttgtttttataagttctattggagaacttatgaaaataag 473209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 541 - 604
Target Start/End: Complemental strand, 3234103 - 3234040
Alignment:
Q  541 aattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataag 604  Q
    ||||||||| ||||| ||||| ||||||||| ||||||||| || |||||||||||||||||||    
T  3234103 aattgtttttgtatatgctataagttgtttttataagctatattggagaacttatgaaaataag 3234040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 499 - 604
Target Start/End: Original strand, 10744249 - 10744346
Alignment:
Q  499 atgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaa 598  Q
    |||||||||||||||  ||| ||||| |||||| ||||||| |||||||||| ||||||||       ||||||||||||| ||||||||||||||| ||    
T  10744249 atgtataagctattttgatgaaaaaagataaaa-taaagttgaattgttttcctataagct-------gttttcataagctgtcttagagaacttataaa 10744340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 529 - 616
Target Start/End: Complemental strand, 14576753 - 14576667
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaatagct 616  Q
    ||||||||||| ||||||||| ||||| ||||| | || |||| ||||||||| ||||||||||| ||||||||||| ||||| ||||    
T  14576753 aaaataaagttaaattgtttttgtatatgctataatttttttttataagctatattagagaactt-tgaaaataagctgaaaaaagct 14576667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 529 - 616
Target Start/End: Complemental strand, 31517840 - 31517753
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaatagct 616  Q
    ||||||||||| ||||| |||| |||||||||| || ||| ||||||| || |||| |||| ||||||||||||||| ||||| ||||    
T  31517840 aaaataaagttaaattgatttcatataagctataagctgtcttcataatctgtcttggagagcttatgaaaataagctgaaaacagct 31517753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 529 - 611
Target Start/End: Original strand, 10809315 - 10809397
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    ||||||||||| || | |||| || |||||||| ||||||| |||| |||||| || |||||||||||||||||||| |||||    
T  10809315 aaaataaagttaaagtatttttgtgtaagctataagttgttctcatcagctatattggagaacttatgaaaataagctgaaaa 10809397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 529 - 611
Target Start/End: Complemental strand, 33204488 - 33204406
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    ||||||||||| | || |||||||||||||| | || |||||||||||||||||| ||| |||||||| || ||||| |||||    
T  33204488 aaaataaagttaatttattttcgtataagctgtaagctgttttcataagctatctgagacaacttatggaagtaagctgaaaa 33204406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 546 - 616
Target Start/End: Original strand, 45975677 - 45975747
Alignment:
Q  546 ttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaatagct 616  Q
    |||| ||||||||||  || ||||||||||||||||||| ||||| |||||||||||||| ||||| ||||    
T  45975677 tttttgtataagctacaagctgttttcataagctatcttggagaatttatgaaaataagctgaaaacagct 45975747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 529 - 605
Target Start/End: Complemental strand, 5592785 - 5592709
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagcta-tcttagagaacttatgaaaataagc 605  Q
    ||||||||||  ||||||| || |||||||||| |||||||||||||||||| ||||| ||| |||||||||||||||    
T  5592785 aaaataaagtcgaattgttgtcatataagctataagttgttttcataagctagtctta-agagcttatgaaaataagc 5592709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 546 - 611
Target Start/End: Complemental strand, 23902150 - 23902085
Alignment:
Q  546 ttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    ||||| |||||||||| ||||||||||| ||||||||||||||| |||||| || ||||| |||||    
T  23902150 ttttcatataagctataagttgttttcaaaagctatcttagagagcttatggaagtaagctgaaaa 23902085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 532 - 613
Target Start/End: Complemental strand, 38018461 - 38018380
Alignment:
Q  532 ataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaata 613  Q
    |||||||| ||||||||||||||||||||  || ||||||||||   |||||| ||||| | |||||||||||| |||||||    
T  38018461 ataaagttaaattgttttcgtataagctagaagctgttttcatacattatcttggagaattcatgaaaataagctgaaaata 38018380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 539 - 611
Target Start/End: Original strand, 2777872 - 2777944
Alignment:
Q  539 ttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    |||||||| || ||||||||||| || |||||| ||||| || ||| |||||||||||||||||||| |||||    
T  2777872 ttaattgtctttgtataagctataagctgttttaataagttaacttggagaacttatgaaaataagctgaaaa 2777944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 529 - 605
Target Start/End: Original strand, 13809968 - 13810044
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagc 605  Q
    ||||||||||| ||||||||| ||||| |||||   ||||||| |||| |||| ||||||||||| |||||||||||    
T  13809968 aaaataaagttaaattgtttttgtatatgctatatattgtttttataaactatattagagaacttgtgaaaataagc 13810044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 544 - 611
Target Start/End: Original strand, 3924609 - 3924676
Alignment:
Q  544 tgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    ||||||||||||| |||||||||||||| |||||||||| |  |||  ||||| ||||||||||||||    
T  3924609 tgttttcgtataatctattagttgtttttataagctatcctgaagagtttatggaaataagccgaaaa 3924676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 564 - 611
Target Start/End: Complemental strand, 12564564 - 12564517
Alignment:
Q  564 gttgttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    ||||||||||||||||||||| ||||||||||| |||||||| |||||    
T  12564564 gttgttttcataagctatcttggagaacttatggaaataagctgaaaa 12564517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 472 - 577
Target Start/End: Original strand, 36070167 - 36070268
Alignment:
Q  472 ttgcagcttatagcataagtgcttcttatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgtttt 571  Q
    ||||||||||||||||||| |   |||||||||  ||||||| |||   |||| || ||||||||||| |||||| |||| ||||||||| |||||||||    
T  36070167 ttgcagcttatagcataagcg---cttatgtatgggctatttttataacaaaagat-aaaataaagttaaattgtcttcggataagctataagttgtttt 36070262  T
Q  572 cataag 577  Q
    ||||||    
T  36070263 cataag 36070268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 497 - 604
Target Start/End: Complemental strand, 36151636 - 36151530
Alignment:
Q  497 ttatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatg 596  Q
    |||||||||||||||||| ||   |||| |||||| ||||||  ||||||||||||||||| ||| | |||||||| ||| | ||| ||| || ||||||    
T  36151636 ttatgtataagctatttcaataacaaaagataaaa-taaagtcaaattgttttcgtataagttataaattgttttcgtaaacaatcctagtgagcttatg 36151538  T
Q  597 aaaataag 604  Q
    ||||||||    
T  36151537 aaaataag 36151530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 546 - 605
Target Start/End: Complemental strand, 37241905 - 37241846
Alignment:
Q  546 ttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagc 605  Q
    ||||| |||||||||  ||||||||||||||| |||| |||||| |||||||||||||||    
T  37241905 ttttcatataagctagaagttgttttcataagatatcctagagagcttatgaaaataagc 37241846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 503 - 610
Target Start/End: Complemental strand, 37517319 - 37517213
Alignment:
Q  503 ataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaata 602  Q
    ||||| |||||||||   ||||||||||| ||||||| ||||||||| |||||   ||| |||| |||| ||||||||| ||||||||||  ||||||||    
T  37517319 ataagttatttctataccaaaatataaaa-taaagttaaattgtttttgtatatattataagttattttaataagctatattagagaactcctgaaaata 37517221  T
Q  603 agccgaaa 610  Q
    | ||||||    
T  37517220 aaccgaaa 37517213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 529 - 611
Target Start/End: Complemental strand, 10199508 - 10199426
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    ||||||||||  || | ||||||||||| | || || | |||||||||||||| ||||||| ||||||||||||||| |||||    
T  10199508 aaaataaagtcaaactattttcgtataatcgataagcttttttcataagctattttagagagcttatgaaaataagctgaaaa 10199426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 529 - 611
Target Start/End: Original strand, 10799432 - 10799514
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    ||||||||||| || || ||| || |||||||| ||||||| |||| |||||  || |||||||||||||||||||| |||||    
T  10799432 aaaataaagttaaagtgcttttgtgtaagctataagttgttctcatcagctacattggagaacttatgaaaataagctgaaaa 10799514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 496 - 582
Target Start/End: Original strand, 17269188 - 17269273
Alignment:
Q  496 cttatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatc 582  Q
    |||||||||||| |||||||| | | |||  | ||||||||||  |||||||||| ||||||| || ||||||||||||||||||||    
T  17269188 cttatgtataagttatttcta-gaacaaaagtgaaaataaagtcaaattgttttcatataagcaataagttgttttcataagctatc 17269273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 543 - 605
Target Start/End: Complemental strand, 25005883 - 25005821
Alignment:
Q  543 ttgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagc 605  Q
    |||||||| |||||||||| |||||||||||||||||||| | |||| ||||| |||| ||||    
T  25005883 ttgttttcatataagctataagttgttttcataagctatcctggagagcttataaaaacaagc 25005821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 558 - 604
Target Start/End: Complemental strand, 26779996 - 26779950
Alignment:
Q  558 ctattagttgttttcataagctatcttagagaacttatgaaaataag 604  Q
    |||| ||||||||||||||||||||||  ||||||||||||||||||    
T  26779996 ctataagttgttttcataagctatcttgaagaacttatgaaaataag 26779950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 503 - 604
Target Start/End: Complemental strand, 38883035 - 38882937
Alignment:
Q  503 ataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaata 602  Q
    ||||||||||||||| | |||| |||||  ||| | | |||||| || ||||||  ||| ||||||||||||||||| ||| ||||||||||||||||||    
T  38883035 ataagctatttctatagcaaaagataaa--taacgctaaattgtctttgtataaaatataagttgttttcataagctctct-agagaacttatgaaaata 38882939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 566 - 616
Target Start/End: Complemental strand, 41195256 - 41195206
Alignment:
Q  566 tgttttcataagctatcttagagaacttatgaaaataagccgaaaatagct 616  Q
    ||||||||||| ||||||| |||||||||||||||||||| ||||| ||||    
T  41195256 tgttttcataaactatcttggagaacttatgaaaataagctgaaaaaagct 41195206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 546 - 604
Target Start/End: Original strand, 49938734 - 49938792
Alignment:
Q  546 ttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataag 604  Q
    |||| ||||| | ||| ||||||||| ||||||||| ||||||||||||||||||||||    
T  49938734 tttttgtatatgttataagttgtttttataagctatattagagaacttatgaaaataag 49938792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 499 - 596
Target Start/End: Complemental strand, 9572237 - 9572141
Alignment:
Q  499 atgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatg 596  Q
    |||||| |||||||||||| | |||| |||||| ||||||| ||||| ||| ||||||||||| ||  ||||||||| || ||| | |||||||||||    
T  9572237 atgtattagctatttctatagcaaaagataaaa-taaagttaaattgcttttgtataagctataagccgttttcatatgccatcattgagaacttatg 9572141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 542 - 611
Target Start/End: Complemental strand, 12287279 - 12287210
Alignment:
Q  542 attgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    |||||||| ||||| ||||| |||||||||| ||||||||||||  |||||||  ||||||||| |||||    
T  12287279 attgtttttgtatatgctataagttgttttcttaagctatcttatggaacttacaaaaataagctgaaaa 12287210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 545 - 611
Target Start/End: Complemental strand, 28689538 - 28689470
Alignment:
Q  545 gttttcgtataagctattagttgttttcata--agctatcttagagaacttatgaaaataagccgaaaa 611  Q
    |||||| |||||||||| |||||||||||||  ||||||||| || | ||||||||||||||| |||||    
T  28689538 gttttcatataagctataagttgttttcatataagctatcttggaaagcttatgaaaataagctgaaaa 28689470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 529 - 582
Target Start/End: Original strand, 37841968 - 37842021
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatc 582  Q
    ||||||||||| |||||||||||||||||||||  ||||||  |||||||||||    
T  37841968 aaaataaagttaaattgttttcgtataagctatatgttgttcgcataagctatc 37842021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 503 - 616
Target Start/End: Original strand, 47432041 - 47432152
Alignment:
Q  503 ataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaata 602  Q
    ||||||||||| ||| |||||| |||||| ||||||| ||||||||| | ||| ||||| || |||||| ||||| ||| ||  |||| |||||||||||    
T  47432041 ataagctatttttatagaaaaagataaaa-taaagttaaattgtttttgaatatgctataaggtgtttt-ataagttatattgaagaatttatgaaaata 47432138  T
Q  603 agccgaaaatagct 616  Q
    ||| ||||| ||||    
T  47432139 agctgaaaaaagct 47432152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 529 - 605
Target Start/End: Original strand, 9656620 - 9656696
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagc 605  Q
    ||||||||||| |||| ||||| |||||||||| || ||| ||||||||||||| | ||  | ||||||||||||||    
T  9656620 aaaataaagttaaattattttcatataagctataagctgtgttcataagctatcctggatgaattatgaaaataagc 9656696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 544 - 584
Target Start/End: Complemental strand, 12564959 - 12564919
Alignment:
Q  544 tgttttcgtataagctattagttgttttcataagctatctt 584  Q
    ||||||| |||||||||| ||||||||||||||||||||||    
T  12564959 tgttttcatataagctataagttgttttcataagctatctt 12564919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 496 - 560
Target Start/End: Complemental strand, 15687205 - 15687142
Alignment:
Q  496 cttatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagcta 560  Q
    |||| ||| |||||||||||||   ||||||||||| ||||||| ||||||||||||||||||||    
T  15687205 cttaagtacaagctatttctataacaaaatataaaa-taaagttaaattgttttcgtataagcta 15687142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 541 - 589
Target Start/End: Original strand, 23445316 - 23445364
Alignment:
Q  541 aattgttttcgtataagctattagttgttttcataagctatcttagaga 589  Q
    ||||||||| |||||||| || |||||||||||||||||||||| ||||    
T  23445316 aattgtttttgtataagccataagttgttttcataagctatcttggaga 23445364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 529 - 581
Target Start/End: Complemental strand, 27738280 - 27738228
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctat 581  Q
    ||||||||||  |||||||||| |||||||||| | |||||||||||||||||    
T  27738280 aaaataaagtcaaattgttttcatataagctataatttgttttcataagctat 27738228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 503 - 611
Target Start/End: Complemental strand, 34795550 - 34795443
Alignment:
Q  503 ataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaata 602  Q
    ||||||||||| ||| |||||| |||||| || ||||||||||| |  ||||| | |||  | |||||| || |||||| || |||||||||||||||||    
T  34795550 ataagctatttttattgaaaaagataaaa-tagagtttaattgtctatgtatacgttatatgctgtttttattagctatattggagaacttatgaaaata 34795452  T
Q  603 agccgaaaa 611  Q
    | |||||||    
T  34795451 aaccgaaaa 34795443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 528 - 612
Target Start/End: Complemental strand, 40394986 - 40394903
Alignment:
Q  528 aaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaat 612  Q
    ||||| |||||| |||||||||| |||||  ||| |||||||||||||| | ||| || ||| ||||||||||||||| ||||||    
T  40394986 aaaaaaaaagttaaattgttttcatataaattataagttgttttcataa-ccatcctatagagcttatgaaaataagctgaaaat 40394903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 497 - 610
Target Start/End: Complemental strand, 4256173 - 4256062
Alignment:
Q  497 ttatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagt-tgttttcataagctatcttagagaacttat 595  Q
    ||||||||||||||||||||    |||| ||| || ||||||| |||| |||||||||||||||| | | |||||  ||||||||||||| | ||||||     
T  4256173 ttatgtataagctatttctacaacaaaagatacaa-taaagttaaattattttcgtataagctataactatgttt--ataagctatcttaaataacttaa 4256077  T
Q  596 gaaaataagccgaaa 610  Q
    |||||||||| ||||    
T  4256076 gaaaataagcagaaa 4256062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 544 - 611
Target Start/End: Original strand, 8130421 - 8130488
Alignment:
Q  544 tgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    |||||||  ||||||||| |||||||||||||||||||| | || |||||||| ||| |||| |||||    
T  8130421 tgttttcacataagctataagttgttttcataagctatcatggaaaacttatggaaacaagctgaaaa 8130488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 544 - 603
Target Start/End: Original strand, 15515526 - 15515585
Alignment:
Q  544 tgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataa 603  Q
    |||||||||||||||||| ||||||||||||||| |||| | || | |||||| ||||||    
T  15515526 tgttttcgtataagctataagttgttttcataagttatcatggatagcttatggaaataa 15515585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 573 - 616
Target Start/End: Complemental strand, 27820252 - 27820209
Alignment:
Q  573 ataagctatcttagagaacttatgaaaataagccgaaaatagct 616  Q
    ||||||||||||| |||| |||||||||||||| ||||||||||    
T  27820252 ataagctatcttaaagaatttatgaaaataagctgaaaatagct 27820209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 472 - 561
Target Start/End: Complemental strand, 34619531 - 34619446
Alignment:
Q  472 ttgcagcttatagcataagtgcttcttatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctat 561  Q
    |||||||||||||||||| |||||   |||||||||| ||||||||   |||| |||||| ||| ||| ||||||||| |||||||||||    
T  34619531 ttgcagcttatagcataattgctt---atgtataagccatttctataacaaaagataaaa-taaggttaaattgtttttgtataagctat 34619446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 544 - 611
Target Start/End: Complemental strand, 35590977 - 35590910
Alignment:
Q  544 tgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    |||||| ||||||||||| ||| | |||||||||||||| | |||| |||||| |||||||| |||||    
T  35590977 tgtttttgtataagctataagtcgatttcataagctatcatggagagcttatggaaataagctgaaaa 35590910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 541 - 616
Target Start/End: Complemental strand, 37631647 - 37631572
Alignment:
Q  541 aattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaatagct 616  Q
    ||||||||| || || | |||||| ||||||  |||||||| || |||||||||||||||||||| ||||| ||||    
T  37631647 aattgtttttgtgtatgatattagctgtttttgtaagctatattggagaacttatgaaaataagctgaaaaaagct 37631572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 541 - 604
Target Start/End: Original strand, 39596579 - 39596642
Alignment:
Q  541 aattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataag 604  Q
    ||||||||| ||||||||||| || || ||| |||||||||||| |||| ||||| ||||||||    
T  39596579 aattgtttttgtataagctataagatggttttataagctatcttggagagcttataaaaataag 39596642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 545 - 604
Target Start/End: Original strand, 42174841 - 42174900
Alignment:
Q  545 gttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataag 604  Q
    ||||| ||||| ||||| ||||||||| ||||| ||| || |||||||||||||||||||    
T  42174841 gtttttgtatatgctataagttgtttttataagttatattggagaacttatgaaaataag 42174900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 541 - 611
Target Start/End: Original strand, 6279381 - 6279451
Alignment:
Q  541 aattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    ||||||||||||||||||| | |  | ||||||||||||||| |||||| |||||| ||||| || |||||    
T  6279381 aattgttttcgtataagctttaaactattttcataagctatcctagagagcttatggaaatacgctgaaaa 6279451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 535 - 605
Target Start/End: Original strand, 6556947 - 6557017
Alignment:
Q  535 aagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagc 605  Q
    ||||| ||||||||| ||||| | ||| ||||||||| ||||| ||| ||| ||||||||||| |||||||    
T  6556947 aagttaaattgtttttgtatatgttataagttgtttttataagttatattaaagaacttatgacaataagc 6557017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 546 - 616
Target Start/End: Original strand, 35179126 - 35179196
Alignment:
Q  546 ttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaatagct 616  Q
    ||||||| |||| ||| || |||||||||||| |||  | |||||||||||||||||||| ||||| ||||    
T  35179126 ttttcgtttaagttataagctgttttcataagttattatggagaacttatgaaaataagctgaaaacagct 35179196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 496 - 601
Target Start/End: Complemental strand, 836471 - 836367
Alignment:
Q  496 cttatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttat 595  Q
    ||||||| |||||||||| ||| |  ||| |||||| ||||  | ||||||||| ||||||||||| |||| |||| ||||||||| | ||| |||| ||    
T  836471 cttatgtgtaagctatttttatagtgaaagataaaa-taaaactaaattgtttttgtataagctataagttatttttataagctatttaagaaaactaat 836373  T
Q  596 gaaaat 601  Q
    ||||||    
T  836372 gaaaat 836367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 552 - 605
Target Start/End: Original strand, 3224416 - 3224469
Alignment:
Q  552 tataagctattagttgttttcataagctatcttagagaacttatgaaaataagc 605  Q
    ||||||||||  | |||||| |||||||||  ||||||||||||||||||||||    
T  3224416 tataagctatagggtgtttttataagctattctagagaacttatgaaaataagc 3224469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 536 - 573
Target Start/End: Complemental strand, 11218038 - 11218001
Alignment:
Q  536 agtttaattgttttcgtataagctattagttgttttca 573  Q
    |||| ||||||||||||||||||||| |||||||||||    
T  11218038 agttaaattgttttcgtataagctataagttgttttca 11218001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 500 - 581
Target Start/End: Original strand, 38578469 - 38578549
Alignment:
Q  500 tgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctat 581  Q
    ||||||||||||||||||   |||| |||| | ||||||| |||| |||| ||||||||||| |||||||| ||||| ||||    
T  38578469 tgtataagctatttctataacaaaagataaca-taaagttaaattatttttgtataagctataagttgtttacataaactat 38578549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 544 - 605
Target Start/End: Original strand, 44422684 - 44422745
Alignment:
Q  544 tgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagc 605  Q
    ||||||| |||||||||| || | |||| |||||||||| | |||| |||||||||||||||    
T  44422684 tgttttcatataagctataagctatttttataagctatcctggagagcttatgaaaataagc 44422745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 500 - 585
Target Start/End: Original strand, 49517012 - 49517096
Alignment:
Q  500 tgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatctta 585  Q
    |||||||| |||||||||   |||| |||||| ||||||  |||||||||| | |||||||| || ||||||||||||||| ||||    
T  49517012 tgtataagttatttctataacaaaagataaaa-taaagtcaaattgttttcatttaagctataagctgttttcataagctagctta 49517096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 65; Significance: 3e-28; HSPs: 64)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 496 - 616
Target Start/End: Original strand, 39105402 - 39105521
Alignment:
Q  496 cttatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttat 595  Q
    |||||||||||||||||||||| |  |||||| ||| | ||||| ||||||||||||||||||||| |  ||||||||||||||||||| ||||||||||    
T  39105402 cttatgtataagctatttctatagctaaatatgaaa-tgaagttaaattgttttcgtataagctataatctgttttcataagctatcttggagaacttat 39105500  T
Q  596 gaaaataagccgaaaatagct 616  Q
    ||||||||||  |||||||||    
T  39105501 gaaaataagctaaaaatagct 39105521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 496 - 604
Target Start/End: Original strand, 12425509 - 12425616
Alignment:
Q  496 cttatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttat 595  Q
    ||||||||||| |||||| ||| | |||| |||||| ||||||| ||||||||||||||||||||| || |||||||| |||||||||| ||||||||||    
T  12425509 cttatgtataaactatttatatagtaaaagataaaa-taaagttaaattgttttcgtataagctataagctgttttcacaagctatcttggagaacttat 12425607  T
Q  596 gaaaataag 604  Q
    |||||||||    
T  12425608 gaaaataag 12425616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 496 - 605
Target Start/End: Complemental strand, 9202880 - 9202772
Alignment:
Q  496 cttatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttat 595  Q
    ||||| |||||||||||||| | | |||| |||||| ||||||| |||||||||| ||||||| || || |||||||||||| ||||||  |||||||||    
T  9202880 cttatatataagctatttctgtagcaaaagataaaa-taaagttaaattgttttcatataagcaataagctgttttcataagttatcttgaagaacttat 9202782  T
Q  596 gaaaataagc 605  Q
    ||||||||||    
T  9202781 gaaaataagc 9202772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 530 - 605
Target Start/End: Complemental strand, 6587206 - 6587131
Alignment:
Q  530 aaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagc 605  Q
    ||||||| || ||||||||||||||||||||| |||||||||||||||||||  | |||||||| |||||||||||    
T  6587206 aaataaacttcaattgttttcgtataagctataagttgttttcataagctatagtggagaacttgtgaaaataagc 6587131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 498 - 616
Target Start/End: Complemental strand, 4014554 - 4014437
Alignment:
Q  498 tatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatga 597  Q
    |||||||||||||||||||| | |||| |||||| |||||||  |||||||| | | ||   || || ||||||||||||||||||| ||||||||||||    
T  4014554 tatgtataagctatttctatagcaaaagataaaa-taaagttagattgtttttggaaaaatgataagctgttttcataagctatcttggagaacttatga 4014456  T
Q  598 aaataagccgaaaatagct 616  Q
    |||||||| ||||| ||||    
T  4014455 aaataagctgaaaacagct 4014437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 541 - 611
Target Start/End: Complemental strand, 10272519 - 10272449
Alignment:
Q  541 aattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    ||||||||||||||||||||| |||||||||||||||| ||||| ||||  |||||||||||||| |||||    
T  10272519 aattgttttcgtataagctataagttgttttcataagccatcttggagagtttatgaaaataagctgaaaa 10272449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 496 - 604
Target Start/End: Original strand, 11700100 - 11700208
Alignment:
Q  496 cttatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagct-attagttgttttcataagctatcttagagaactta 594  Q
    ||||||||||||||||||||||  ||||| |||||  |||||||   ||||||||||||||||| || ||||||||| ||| |||||| | |||||||||    
T  11700100 cttatgtataagctatttctatataaaaaaataaat-taaagttatgttgttttcgtataagcttataagttgttttgatatgctatcgtggagaactta 11700198  T
Q  595 tgaaaataag 604  Q
    ||||||||||    
T  11700199 tgaaaataag 11700208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 503 - 605
Target Start/End: Complemental strand, 7319136 - 7319032
Alignment:
Q  503 ataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagt---tgttttcataagctatcttagagaacttatgaaa 599  Q
    ||||||||||||||  | ||||||||||| ||||||  |||||||||||  ||||||||||     ||||||||||||||||||| ||||||||||||||    
T  7319136 ataagctatttctaacgcaaaatataaaa-taaagtgaaattgttttcgcttaagctattataaactgttttcataagctatcttggagaacttatgaaa 7319038  T
Q  600 ataagc 605  Q
    ||||||    
T  7319037 ataagc 7319032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 496 - 611
Target Start/End: Original strand, 7674586 - 7674700
Alignment:
Q  496 cttatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttat 595  Q
    ||||| ||||||||||||||||   |||| |||||| |||| || |||||||||| ||||||| || |  ||||||||||||||||||| ||||| || |    
T  7674586 cttatatataagctatttctataccaaaagataaaa-taaatttaaattgttttcttataagccataaaatgttttcataagctatcttggagaatttgt 7674684  T
Q  596 gaaaataagccgaaaa 611  Q
    |||||||||| |||||    
T  7674685 gaaaataagctgaaaa 7674700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 532 - 610
Target Start/End: Original strand, 7319379 - 7319457
Alignment:
Q  532 ataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaa 610  Q
    |||||||| |||||||||| |||||||||| |  ||||||| ||||||||||| |||||||||| ||||||||| ||||    
T  7319379 ataaagttaaattgttttcatataagctataaactgttttcgtaagctatcttggagaacttataaaaataagctgaaa 7319457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 529 - 605
Target Start/End: Original strand, 2568627 - 2568704
Alignment:
Q  529 aaaataaagtttaattgtttt-cgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagc 605  Q
    |||| |||||| ||||||||| |||||||||||| |||||||||||||||||||| | |||| || ||||||||||||    
T  2568627 aaaacaaagttaaattgtttttcgtataagctataagttgttttcataagctatcatggagagctaatgaaaataagc 2568704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 496 - 605
Target Start/End: Original strand, 42582850 - 42582958
Alignment:
Q  496 cttatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttat 595  Q
    ||||||||||||||||||| |||  |||| || ||| ||||||| |||||| ||||| |||| ||| || ||||||  |||||||| || ||||||||||    
T  42582850 cttatgtataagctatttccatgataaaagatgaaa-taaagttaaattgtgttcgtttaaggtataagctgtttttgtaagctatattggagaacttat 42582948  T
Q  596 gaaaataagc 605  Q
    ||||||||||    
T  42582949 gaaaataagc 42582958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 544 - 604
Target Start/End: Original strand, 28776978 - 28777038
Alignment:
Q  544 tgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataag 604  Q
    |||||||||||| ||||| || ||||||||||||||||||| ||||||| |||||||||||    
T  28776978 tgttttcgtataggctataagctgttttcataagctatcttggagaactaatgaaaataag 28777038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 503 - 611
Target Start/End: Original strand, 39594753 - 39594859
Alignment:
Q  503 ataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaata 602  Q
    ||||||||||||||| |||||| |||||| ||||||  ||||||||||| ||||| | | || |||||||||||| ||||||   |||||||||||||||    
T  39594753 ataagctatttctatagaaaaagataaaa-taaagta-aattgttttcgcataagttgtaagctgttttcataagatatcttgttgaacttatgaaaata 39594850  T
Q  603 agccgaaaa 611  Q
    ||| |||||    
T  39594851 agctgaaaa 39594859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 502 - 605
Target Start/End: Original strand, 10639897 - 10639999
Alignment:
Q  502 tataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaat 601  Q
    |||||||||||||||| | |||| |||||| |||| || ||||||||| ||||| |  || |||||||| ||||| |||| || ||||||||||||||||    
T  10639897 tataagctatttctatagcaaaagataaaattaaa-ttaaattgtttttgtatatgtgatgagttgtttacataaactattttggagaacttatgaaaat 10639995  T
Q  602 aagc 605  Q
    ||||    
T  10639996 aagc 10639999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 529 - 604
Target Start/End: Complemental strand, 41957551 - 41957476
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataag 604  Q
    ||||| ||||| |||||||||| | |||| ||| || ||||||||||||||||| | |||||||||||||||||||    
T  41957551 aaaatgaagttaaattgttttcatgtaagttataagctgttttcataagctatccttgagaacttatgaaaataag 41957476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 546 - 604
Target Start/End: Original strand, 15246820 - 15246878
Alignment:
Q  546 ttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataag 604  Q
    |||||||||||||||| || ||||||||||||||||||||||||| | || ||||||||    
T  15246820 ttttcgtataagctatgagctgttttcataagctatcttagagaaatgataaaaataag 15246878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 546 - 616
Target Start/End: Complemental strand, 15557330 - 15557260
Alignment:
Q  546 ttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaatagct 616  Q
    ||||| |||||||||||||||||||||||||||||| | | ||| ||| |||||||||||  |||||||||    
T  15557330 ttttcttataagctattagttgttttcataagctatttcatagagcttttgaaaataagctcaaaatagct 15557260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 530 - 611
Target Start/End: Original strand, 25461062 - 25461143
Alignment:
Q  530 aaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    ||||||||||  |||||||| ||||| | ||| ||||||||||||||||| | || ||||||| |||||||||||| |||||    
T  25461062 aaataaagttgtattgtttttgtatatgttataagttgttttcataagctctattggagaactgatgaaaataagctgaaaa 25461143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 496 - 616
Target Start/End: Original strand, 6593238 - 6593356
Alignment:
Q  496 cttatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttat 595  Q
    ||||||||||| | ||||||||   |||| |||||| ||||||| |||| || | ||||| ||||| || |||||| |||||||| |||||||| |||||    
T  6593238 cttatgtataaacaatttctataacaaaagataaaa-taaagttaaattattct-gtataggctataagctgttttgataagctaccttagagagcttat 6593335  T
Q  596 gaaaataagccgaaaatagct 616  Q
    |||||||||| ||||| ||||    
T  6593336 gaaaataagctgaaaagagct 6593356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 496 - 611
Target Start/End: Complemental strand, 1465151 - 1465038
Alignment:
Q  496 cttatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttat 595  Q
    |||||||||||||||||||||| | | |  || ||||||||||| ||| | ||| || |||||||| |||| |||| |||||||||||| ||| |||| |    
T  1465151 cttatgtataagctatttctatagcataggat-aaaataaagttaaatcgcttttgtgtaagctataagttatttt-ataagctatcttggaggacttgt 1465054  T
Q  596 gaaaataagccgaaaa 611  Q
    |||||||||| |||||    
T  1465053 gaaaataagctgaaaa 1465038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 497 - 611
Target Start/End: Complemental strand, 12460131 - 12460019
Alignment:
Q  497 ttatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatg 596  Q
    |||||||||||||||||||||   |||| ||||||   |||||  |||||||||  |||| |||| |||||| |||| ||||||||||  ||| ||||||    
T  12460131 ttatgtataagctatttctataacaaaagataaaat--aagttatattgttttcaaataaactataagttgtcttcacaagctatcttgcagagcttatg 12460034  T
Q  597 aaaataagccgaaaa 611  Q
    |||||||||| ||||    
T  12460033 aaaataagccaaaaa 12460019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 532 - 611
Target Start/End: Original strand, 42569731 - 42569810
Alignment:
Q  532 ataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    |||||||  |||||||||||| |||||||| || ||| |||||||| || ||| |||||||||| ||||||||| |||||    
T  42569731 ataaagtgaaattgttttcgtctaagctataagctgtcttcataaggtagcttggagaacttataaaaataagctgaaaa 42569810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 546 - 604
Target Start/End: Complemental strand, 15309076 - 15309018
Alignment:
Q  546 ttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataag 604  Q
    ||||| |||||||||| |||||||||||| ||||||| | |||| ||||||||||||||    
T  15309076 ttttcttataagctataagttgttttcattagctatcattgagatcttatgaaaataag 15309018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 546 - 616
Target Start/End: Original strand, 36318761 - 36318831
Alignment:
Q  546 ttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaatagct 616  Q
    |||| ||||||| | | |||||||||||||||||||||| ||||| ||||| |||||||| ||||| ||||    
T  36318761 tttttgtataagttttaagttgttttcataagctatcttggagaatttatgtaaataagctgaaaacagct 36318831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 555 - 616
Target Start/End: Original strand, 7984965 - 7985026
Alignment:
Q  555 aagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaatagct 616  Q
    ||||||| || | ||||||||||||||||| ||||| |||||||||||||| ||||| ||||    
T  7984965 aagctataagcttttttcataagctatcttggagaatttatgaaaataagctgaaaacagct 7985026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 529 - 616
Target Start/End: Original strand, 11064400 - 11064489
Alignment:
Q  529 aaaataaagtttaa-ttgttttcgtataagct-attagttgttttcataagctatcttagagaacttatgaaaataagccgaaaatagct 616  Q
    ||||| |||||||| ||||||| ||||||| | || ||||| |||||||||||||||| ||  |||||||| ||||||| ||||||||||    
T  11064400 aaaattaagtttaaattgtttttgtataaggttataagttgctttcataagctatctttgatgacttatgagaataagcagaaaatagct 11064489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 503 - 604
Target Start/End: Original strand, 29925786 - 29925886
Alignment:
Q  503 ataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaata 602  Q
    ||||||||||| ||| | |||| |||||| ||  ||| ||||||||  ||||  ||||| |||||||| |||||||||| || |||||||||||||||||    
T  29925786 ataagctatttttatagcaaaagataaaa-tagcgttaaattgtttctgtatgtgctataagttgtttacataagctatattggagaacttatgaaaata 29925884  T
Q  603 ag 604  Q
    ||    
T  29925885 ag 29925886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 496 - 561
Target Start/End: Complemental strand, 42569112 - 42569048
Alignment:
Q  496 cttatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctat 561  Q
    |||||| | ||||||||||||| | |||| |||||| |||||| ||||||||||||||||||||||    
T  42569112 cttatgaaaaagctatttctatagcaaaagataaaa-taaagtctaattgttttcgtataagctat 42569048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 496 - 616
Target Start/End: Original strand, 4855636 - 4855755
Alignment:
Q  496 cttatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttat 595  Q
    ||||||||| |||||||| |||   |||| |||||| ||||||| ||||||| || |||||| ||| |||||||||||||| |||||  | ||| ||||     
T  4855636 cttatgtattagctatttttataacaaaaaataaaa-taaagttaaattgttatcatataagttataagttgttttcataaactatcccaaagagcttac 4855734  T
Q  596 gaaaataagccgaaaatagct 616  Q
      |||||||||||||| ||||    
T  4855735 agaaataagccgaaaacagct 4855755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 552 - 600
Target Start/End: Original strand, 32942611 - 32942659
Alignment:
Q  552 tataagctattagttgttttcataagctatcttagagaacttatgaaaa 600  Q
    |||| ||||| || ||||||||||||||||||| |||||||||||||||    
T  32942611 tatatgctataagctgttttcataagctatcttggagaacttatgaaaa 32942659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 552 - 600
Target Start/End: Complemental strand, 34117613 - 34117565
Alignment:
Q  552 tataagctattagttgttttcataagctatcttagagaacttatgaaaa 600  Q
    |||||||||| ||||| |||||||||||||||| |||| ||||||||||    
T  34117613 tataagctataagttgctttcataagctatcttggagagcttatgaaaa 34117565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 529 - 605
Target Start/End: Complemental strand, 41981965 - 41981889
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagc 605  Q
    ||||||||| | || |||||| |||||| |||| || ||||||||||| |||| || ||||||||| ||||||||||    
T  41981965 aaaataaagctaaaatgtttttgtataaactataagctgttttcataaactatttttgagaacttacgaaaataagc 41981889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 558 - 610
Target Start/End: Original strand, 43300877 - 43300929
Alignment:
Q  558 ctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaa 610  Q
    |||| |||||||||  ||||||||||| |||||||||||||||||||| ||||    
T  43300877 ctataagttgtttttgtaagctatcttggagaacttatgaaaataagctgaaa 43300929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 496 - 559
Target Start/End: Original strand, 465892 - 465954
Alignment:
Q  496 cttatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagct 559  Q
    ||||| |||||||||||||||||  |||| |||||| ||||||| ||||||||| |||||||||    
T  465892 cttatatataagctatttctatgacaaaagataaaa-taaagttaaattgtttttgtataagct 465954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 541 - 584
Target Start/End: Original strand, 5559707 - 5559750
Alignment:
Q  541 aattgttttcgtataagctattagttgttttcataagctatctt 584  Q
    ||||||||| ||||||||||| |||||||||||| |||||||||    
T  5559707 aattgttttagtataagctataagttgttttcattagctatctt 5559750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 541 - 596
Target Start/End: Original strand, 12975329 - 12975384
Alignment:
Q  541 aattgttttcgtataagctattagttgttttcataagctatcttagagaacttatg 596  Q
    |||||||||| |||||||||| || ||| ||||||||||||||| |||| ||||||    
T  12975329 aattgttttcatataagctataagctgtgttcataagctatcttggagagcttatg 12975384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 544 - 611
Target Start/End: Original strand, 17368661 - 17368728
Alignment:
Q  544 tgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    |||||| || ||| |||| |||||||||||||||||||||| ||||  ||||| |||||||| |||||    
T  17368661 tgtttttgtgtaatctataagttgttttcataagctatcttggagaggttatggaaataagctgaaaa 17368728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 529 - 600
Target Start/End: Original strand, 32009662 - 32009733
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaa 600  Q
    ||||| ||||| ||||||| | ||||| ||||| | ||||||| ||||||||| || |||||||||||||||    
T  32009662 aaaatgaagttgaattgttcttgtatatgctataaattgtttttataagctatattggagaacttatgaaaa 32009733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 529 - 600
Target Start/End: Original strand, 32372594 - 32372665
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaa 600  Q
    ||||||||||| ||||||||| ||||| ||||| || |||||||| ||| |||||| |||||| ||| ||||    
T  32372594 aaaataaagttgaattgtttttgtatatgctataagctgttttcacaagttatcttggagaacatataaaaa 32372665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 529 - 611
Target Start/End: Complemental strand, 32703374 - 32703294
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    ||||||||||| |||| |||  ||||  ||||| |||||||||||||||||||||  ||||| |||| ||||||||| |||||    
T  32703374 aaaataaagttaaattatttctgtat--gctataagttgttttcataagctatctaggagaatttataaaaataagctgaaaa 32703294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 496 - 611
Target Start/End: Original strand, 34160669 - 34160783
Alignment:
Q  496 cttatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttat 595  Q
    |||||||||||| ||||||||| | | ||| ||||| |||| |  |||| |||||||| ||  ||| || | ||||||| || |||||| ||||||||||    
T  34160669 cttatgtataagatatttctatagcagaatgtaaaa-taaattgaaattcttttcgtaaaatttataagctattttcattagatatcttggagaacttat 34160767  T
Q  596 gaaaataagccgaaaa 611  Q
    |||||||||| |||||    
T  34160768 gaaaataagctgaaaa 34160783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 541 - 604
Target Start/End: Complemental strand, 35445931 - 35445868
Alignment:
Q  541 aattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataag 604  Q
    ||||||||||||||||| ||| || |||| |  ||||||||||| ||||| |||||||||||||    
T  35445931 aattgttttcgtataagttataaggtgttcttgtaagctatcttggagaatttatgaaaataag 35445868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 545 - 616
Target Start/End: Complemental strand, 37588444 - 37588373
Alignment:
Q  545 gttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaatagct 616  Q
    |||||| |||||||||| ||||||||||||||| |||  | |||| |||||| |||||||| ||||| ||||    
T  37588444 gttttcatataagctataagttgttttcataagttattctggagagcttatggaaataagctgaaaacagct 37588373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 529 - 595
Target Start/End: Complemental strand, 12595840 - 12595774
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttat 595  Q
    ||||||||||| |||||||||| ||||| |||| || || |||||||||||| |||| ||| |||||    
T  12595840 aaaataaagttaaattgttttcatataaactatgagctggtttcataagctaccttaaagagcttat 12595774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 563 - 605
Target Start/End: Complemental strand, 24030467 - 24030425
Alignment:
Q  563 agttgttttcataagctatcttagagaacttatgaaaataagc 605  Q
    ||||||||| ||||||||| ||||| |||||||||||||||||    
T  24030467 agttgtttttataagctatattagataacttatgaaaataagc 24030425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 552 - 606
Target Start/End: Original strand, 34245717 - 34245771
Alignment:
Q  552 tataagctattagttgttttcataagctatcttagagaacttatgaaaataagcc 606  Q
    |||||||||| ||||||||| |||||||||| | |||| || |||||||||||||    
T  34245717 tataagctataagttgtttttataagctatcatggagagctgatgaaaataagcc 34245771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 569 - 611
Target Start/End: Complemental strand, 38104917 - 38104875
Alignment:
Q  569 tttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    ||||||||||||||||||||| |||||| |||||||| |||||    
T  38104917 tttcataagctatcttagagagcttatggaaataagctgaaaa 38104875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 529 - 603
Target Start/End: Complemental strand, 40119968 - 40119894
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataa 603  Q
    |||| |||||| |||| ||| |||||||||||| |  ||||||||||||| ||||| || ||||| |||||||||    
T  40119968 aaaacaaagttgaattatttccgtataagctataacctgttttcataagcgatcttggataacttgtgaaaataa 40119894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 529 - 611
Target Start/End: Original strand, 40731439 - 40731521
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    ||||||||||| ||||| |||  ||||| ||| ||  ||||||||||||||||| | |||| |||||||||||| || |||||    
T  40731439 aaaataaagttaaattggtttgatataatctactacatgttttcataagctatccttgagagcttatgaaaatatgctgaaaa 40731521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 544 - 610
Target Start/End: Original strand, 41016164 - 41016230
Alignment:
Q  544 tgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaa 610  Q
    ||||||| |||||||||| ||||||||||| |||| ||| | || | ||||||||||||||| ||||    
T  41016164 tgttttcatataagctataagttgttttcacaagccatcatggaaagcttatgaaaataagctgaaa 41016230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 551 - 593
Target Start/End: Original strand, 41016569 - 41016611
Alignment:
Q  551 gtataagctattagttgttttcataagctatcttagagaactt 593  Q
    ||||||||||| ||  |||||||||||||||||||||||||||    
T  41016569 gtataagctataagccgttttcataagctatcttagagaactt 41016611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 541 - 582
Target Start/End: Complemental strand, 5946767 - 5946726
Alignment:
Q  541 aattgttttcgtataagctattagttgttttcataagctatc 582  Q
    |||| |||||| ||||||||||||||||||| ||||||||||    
T  5946767 aattattttcgaataagctattagttgtttttataagctatc 5946726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 530 - 602
Target Start/End: Complemental strand, 14675000 - 14674927
Alignment:
Q  530 aaataaagtttaattgttttcgtataa-gctattagttgttttcataagctatcttagagaacttatgaaaata 602  Q
    |||||||||| ||||| || ||||||| ||||| ||||||| ||||||| |||| |  ||||||||||||||||    
T  14675000 aaataaagttaaattgattccgtataaagctataagttgttctcataagatatcctgtagaacttatgaaaata 14674927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 541 - 610
Target Start/End: Complemental strand, 17560502 - 17560433
Alignment:
Q  541 aattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaa 610  Q
    |||| ||||| |||||| ||| || |||||| ||||| |||||| |||||||| ||||||||||| ||||    
T  17560502 aattattttcatataaggtataagctgtttttataagttatcttcgagaacttgtgaaaataagctgaaa 17560433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 541 - 611
Target Start/End: Complemental strand, 19138807 - 19138735
Alignment:
Q  541 aattgttttcgtataagctattagttgttttcataagctatctta--gagaacttatgaaaataagccgaaaa 611  Q
    ||||||||||  ||||||||| |||||||||||||||||||  ||  |||| |||||| |||||||| |||||    
T  19138807 aattgttttcagataagctataagttgttttcataagctattatatggagagcttatggaaataagctgaaaa 19138735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 539 - 616
Target Start/End: Complemental strand, 25461406 - 25461329
Alignment:
Q  539 ttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaatagct 616  Q
    ||||||||||| | ||||||||| |  ||||||||||| ||||||| | | | |||||||||||||| ||||| ||||    
T  25461406 ttaattgtttttgcataagctataaactgttttcataacctatcttggcgtatttatgaaaataagctgaaaacagct 25461329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 541 - 594
Target Start/End: Original strand, 31038276 - 31038329
Alignment:
Q  541 aattgttttcgtataagctattagttgttttcataagctatcttagagaactta 594  Q
    ||||||||||||||| ||||| |||||||| ||||| |||| || |||||||||    
T  31038276 aattgttttcgtatatgctataagttgtttccataaactattttggagaactta 31038329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 541 - 594
Target Start/End: Original strand, 31047500 - 31047553
Alignment:
Q  541 aattgttttcgtataagctattagttgttttcataagctatcttagagaactta 594  Q
    ||||||||||||||| ||||| |||||||| ||||| |||| || |||||||||    
T  31047500 aattgttttcgtatatgctataagttgtttccataaactattttggagaactta 31047553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 543 - 612
Target Start/End: Original strand, 32172637 - 32172706
Alignment:
Q  543 ttgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaat 612  Q
    |||||| | |||||||||| || ||||||||||||||||| |  |||||| ||| |||||||| ||||||    
T  32172637 ttgtttacatataagctataagctgttttcataagctatcatgaagaactaatggaaataagctgaaaat 32172706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 565 - 614
Target Start/End: Original strand, 32545040 - 32545089
Alignment:
Q  565 ttgttttcataagctatcttagagaacttatgaaaataagccgaaaatag 614  Q
    ||||| |||||||||||||| |||| ||||||||||||| | ||||||||    
T  32545040 ttgttctcataagctatcttggagagcttatgaaaataatctgaaaatag 32545089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 546 - 611
Target Start/End: Original strand, 36325998 - 36326063
Alignment:
Q  546 ttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    |||| ||||||| ||| ||||| |||| ||||||||||| ||||| ||||| |||||||| |||||    
T  36325998 tttttgtataagttataagttgctttcgtaagctatcttggagaatttatgtaaataagctgaaaa 36326063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 530 - 611
Target Start/End: Original strand, 42583120 - 42583201
Alignment:
Q  530 aaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    |||||||||| |||||||||||| ||||  || || |||||||||||  |||| | |||||||||||||  ||||| |||||    
T  42583120 aaataaagttaaattgttttcgtgtaagggataagctgttttcataatttatcgtggagaacttatgaatgtaagctgaaaa 42583201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 529 - 598
Target Start/End: Original strand, 42646885 - 42646954
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaa 598  Q
    ||||| ||||| ||||||||| || |||||||| || ||||||||||| | ||||| |||| ||||||||    
T  42646885 aaaattaagttaaattgtttttgtttaagctataaggtgttttcataaacgatcttggagagcttatgaa 42646954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 64; Significance: 1e-27; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 496 - 611
Target Start/End: Complemental strand, 9093688 - 9093574
Alignment:
Q  496 cttatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttat 595  Q
    |||||| |||||||||||||||   |||| |||||| ||||||| ||||||||||||||||||||| || |||||||||||||| ||||||||||||||     
T  9093688 cttatggataagctatttctatatcaaaagataaaa-taaagttaaattgttttcgtataagctataagctgttttcataagctgtcttagagaacttaa 9093590  T
Q  596 gaaaataagccgaaaa 611  Q
    |||||||||| |||||    
T  9093589 gaaaataagctgaaaa 9093574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 503 - 605
Target Start/End: Complemental strand, 6909998 - 6909896
Alignment:
Q  503 ataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaata 602  Q
    ||||||||||||||| | |||| | |||||||||||| ||||||||| ||||| ||||| ||||||||||||||  |||||| ||||| |||||||| ||    
T  6909998 ataagctatttctataggaaaagaaaaaaataaagttaaattgtttttgtatatgctataagttgttttcataacatatcttggagaatttatgaaatta 6909899  T
Q  603 agc 605  Q
    |||    
T  6909898 agc 6909896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 536 - 612
Target Start/End: Complemental strand, 837309 - 837233
Alignment:
Q  536 agtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaat 612  Q
    |||| ||||||||| || |||||||| ||| |||||||| ||||||||| |||||||||||||||||||| ||||||    
T  837309 agttaaattgttttggtgtaagctataagtagttttcattagctatcttggagaacttatgaaaataagctgaaaat 837233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 529 - 616
Target Start/End: Original strand, 2735039 - 2735126
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaatagct 616  Q
    ||||||||||| |||| |||| |||||| |||| || ||||||||||||| |||||  | ||||||||||||||||||||||| ||||    
T  2735039 aaaataaagttaaattatttttgtataatctataagctgttttcataagcaatcttgaacaacttatgaaaataagccgaaaacagct 2735126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 529 - 604
Target Start/End: Complemental strand, 20368280 - 20368205
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataag 604  Q
    ||||| ||||| ||||||||| |||| || ||| ||||||||||||||||| |||| |||||||||||||||||||    
T  20368280 aaaatgaagttgaattgtttttgtatgagttataagttgttttcataagctttcttggagaacttatgaaaataag 20368205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 504 - 613
Target Start/End: Complemental strand, 29296417 - 29296311
Alignment:
Q  504 taagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataa 603  Q
    ||||| ||||||||| ||||| |||||| ||||||| |||| |||| ||||||| ||| |||||||||| |||||| ||||| ||  |||||||||||||    
T  29296417 taagcgatttctatgaaaaaagataaaa-taaagttaaattatttttgtataaggtataagttgttttcttaagctctcttatag--cttatgaaaataa 29296321  T
Q  604 gccgaaaata 613  Q
    || |||||||    
T  29296320 gctgaaaata 29296311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 534 - 611
Target Start/End: Complemental strand, 836636 - 836559
Alignment:
Q  534 aaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    |||||| ||||||||| |||| ||||||||| ||| ||||||||||||||| | |||||||||||||| ||| |||||    
T  836636 aaagttaaattgttttggtatgagctattagctgtgttcataagctatcttggggaacttatgaaaatgagctgaaaa 836559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 478 - 613
Target Start/End: Original strand, 4006637 - 4006768
Alignment:
Q  478 cttatagcataagtgcttcttatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataag 577  Q
    |||||||||||||||   |||||| ||||| |||||||||  | ||||   ||||||||||  |||||||||  |||||||||| |||||||||||||||    
T  4006637 cttatagcataagtg---cttatgcataagatatttctat-aacaaatgataaaataaagtcaaattgtttttatataagctataagttgttttcataag 4006732  T
Q  578 ctatcttagagaacttatgaaaataagccgaaaata 613  Q
    |||||   ||||  |||||||||||||| |||||||    
T  4006733 ctatccctgagaggttatgaaaataagctgaaaata 4006768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 504 - 604
Target Start/End: Original strand, 35098981 - 35099082
Alignment:
Q  504 taagctatttctat-ggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaata 602  Q
    |||||||||||||| ||||||| |  |||| |  ||||||||||||| ||||| | ||| |||||||||||||||||||||||||| | || ||||||||    
T  35098981 taagctatttctataggaaaaaaaataaaaaattgtttaattgtttttgtatatgttataagttgttttcataagctatcttagagtatttttgaaaata 35099080  T
Q  603 ag 604  Q
    ||    
T  35099081 ag 35099082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 529 - 596
Target Start/End: Original strand, 415274 - 415341
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatg 596  Q
    |||| |||||| ||||||||||||||||||||| ||||||||| |||||||||  | |||||||||||    
T  415274 aaaacaaagttaaattgttttcgtataagctataagttgtttttataagctatagtggagaacttatg 415341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 528 - 611
Target Start/End: Original strand, 26694847 - 26694930
Alignment:
Q  528 aaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    ||||| |||||| |||||||| |||||| | ||| | |||||||||||| |||||||  ||||||||||||||||||| |||||    
T  26694847 aaaaaaaaagttaaattgtttccgtatatgttataaattgttttcataaactatcttgaagaacttatgaaaataagctgaaaa 26694930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 500 - 603
Target Start/End: Original strand, 31624200 - 31624302
Alignment:
Q  500 tgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaa 599  Q
    ||||||||||||||||||   |||| |||||| |||  || |||||||||||||||| ||||||| |||||| ||||||| |||| | ||| ||||||||    
T  31624200 tgtataagctatttctataacaaaagataaaa-taagtttaaattgttttcgtataatctattagctgttttaataagctgtcttggtgaaattatgaaa 31624298  T
Q  600 ataa 603  Q
    ||||    
T  31624299 ataa 31624302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 541 - 616
Target Start/End: Complemental strand, 34430549 - 34430474
Alignment:
Q  541 aattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaatagct 616  Q
    ||||||||| ||||| | ||| || ||||||||||||||||||| ||||| |||||||||||||| ||||| ||||    
T  34430549 aattgtttttgtatatgttataaggtgttttcataagctatcttggagaagttatgaaaataagctgaaaaaagct 34430474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 547 - 613
Target Start/End: Original strand, 13907573 - 13907639
Alignment:
Q  547 tttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaata 613  Q
    |||||||||| |||| |||||||||||||||| ||||| ||||| |||||||||||| | |||||||    
T  13907573 tttcgtataacctataagttgttttcataagccatcttggagaaattatgaaaataaactgaaaata 13907639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 529 - 611
Target Start/End: Complemental strand, 31671174 - 31671092
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    |||| |||||| |||||||||| |||||||||| || ||||||| ||| ||||| |||| | ||||||||||||||| |||||    
T  31671174 aaaacaaagttaaattgttttcatataagctataagctgttttcgtaaactatcctagatagcttatgaaaataagctgaaaa 31671092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 551 - 605
Target Start/End: Complemental strand, 31812091 - 31812037
Alignment:
Q  551 gtataagctattagttgttttcataagctatcttagagaacttatgaaaataagc 605  Q
    ||||||| ||| |||||||||||||||||||||| |||| |||||||||||||||    
T  31812091 gtataagatataagttgttttcataagctatcttggagagcttatgaaaataagc 31812037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 496 - 577
Target Start/End: Complemental strand, 29274361 - 29274281
Alignment:
Q  496 cttatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataag 577  Q
    |||||||||||||||||||||| | |||| |||||| ||||||  |||||||||| |||||||||| |  ||||||||||||    
T  29274361 cttatgtataagctatttctatagcaaaagataaaa-taaagtcaaattgttttcatataagctataaactgttttcataag 29274281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 567 - 611
Target Start/End: Complemental strand, 835311 - 835267
Alignment:
Q  567 gttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    |||||||||||||||||| |||||||||||||||||||| |||||    
T  835311 gttttcataagctatcttggagaacttatgaaaataagctgaaaa 835267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 497 - 589
Target Start/End: Complemental strand, 20671996 - 20671905
Alignment:
Q  497 ttatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagaga 589  Q
    ||||||||||||||||||||    |||| || ||||||||||  ||||||||||||||||||| | | |||||||||||| ||||| ||||||    
T  20671996 ttatgtataagctatttctagatcaaaagat-aaaataaagtcaaattgttttcgtataagctttaaattgttttcataaactatcatagaga 20671905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 496 - 615
Target Start/End: Original strand, 25099980 - 25100099
Alignment:
Q  496 cttatgtat-aagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaactta 594  Q
    ||||||||| ||||||||||||  | ||||||| ||| || |||  |||||||||| || ||| ||| ||||||||||||||||||||||| ||| ||||    
T  25099980 cttatgtatcaagctatttctaaagcaaaatatgaaa-tagagtcaaattgttttcatagaagttataagttgttttcataagctatcttaaagagctta 25100078  T
Q  595 tgaaaataagccgaaaatagc 615  Q
    |  |||||||  |||||||||    
T  25100079 tagaaataagttgaaaatagc 25100099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 529 - 611
Target Start/End: Complemental strand, 281948 - 281866
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    ||||||||||  | |||||||| |||||||||| || ||| ||||||||||||| |||||| || ||| |||||||| |||||    
T  281948 aaaataaagtcaacttgttttcatataagctataagctgtgttcataagctatcctagagagctcatggaaataagctgaaaa 281866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 529 - 611
Target Start/End: Original strand, 2112171 - 2112252
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    ||||||||||| |||||||| | ||||| |||| |||||||||||||| |||||||||||  |||||  |||||| |||||||    
T  2112171 aaaataaagttaaattgttt-catataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaa 2112252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 566 - 604
Target Start/End: Original strand, 6647394 - 6647432
Alignment:
Q  566 tgttttcataagctatcttagagaacttatgaaaataag 604  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  6647394 tgttttcataagctatcttagagagcttatgaaaataag 6647432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 497 - 603
Target Start/End: Original strand, 10400208 - 10400313
Alignment:
Q  497 ttatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatg 596  Q
    ||||||||||||||||| |||   |||| |||||||||||||  ||||||| || |||||||||| || ||| |||||||| |||| | | || ||||||    
T  10400208 ttatgtataagctattt-tataataaaagataaaaataaagtcaaattgttatcatataagctataagatgtcttcataagatatcctggtgagcttatg 10400306  T
Q  597 aaaataa 603  Q
    |||||||    
T  10400307 aaaataa 10400313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 497 - 611
Target Start/End: Original strand, 27893986 - 27894098
Alignment:
Q  497 ttatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatg 596  Q
    ||||||||||||||||||||    | ||||| ||||||||||  |||||||||  ||||| ||||||| |||||||||||| ||||||  | | ||||||    
T  27893986 ttatgtataagctatttctacaacagaatat-aaaataaagtcaaattgttttaatataaactattag-tgttttcataagatatcttgaaaagcttatg 27894083  T
Q  597 aaaataagccgaaaa 611  Q
    ||||||||| |||||    
T  27894084 aaaataagctgaaaa 27894098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 497 - 611
Target Start/End: Complemental strand, 33787876 - 33787763
Alignment:
Q  497 ttatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatg 596  Q
    |||||||||| ||||||||||   |||||||||||  |||||  ||||| |||| |||||| ||| || |||||||||||| |||||| |||| ||||||    
T  33787876 ttatgtataaactatttctataacaaaatataaaac-aaagtcaaattgatttcatataagttataagctgttttcataagttatcttggagagcttatg 33787778  T
Q  597 aaaataagccgaaaa 611  Q
     ||||| || |||||    
T  33787777 gaaataggctgaaaa 33787763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 539 - 604
Target Start/End: Original strand, 6536595 - 6536660
Alignment:
Q  539 ttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataag 604  Q
    ||||||||||| ||||| ||||| ||||||||| | ||||||| || ||||| |||||||||||||    
T  6536595 ttaattgtttttgtatatgctataagttgtttttagaagctatattggagaatttatgaaaataag 6536660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 530 - 579
Target Start/End: Complemental strand, 7485167 - 7485118
Alignment:
Q  530 aaataaagtttaattgttttcgtataagctattagttgttttcataagct 579  Q
    |||||||||| |||| ||||| |||||||||| |||||||||||||||||    
T  7485167 aaataaagttaaatttttttcatataagctataagttgttttcataagct 7485118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 503 - 584
Target Start/End: Original strand, 24626240 - 24626320
Alignment:
Q  503 ataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatctt 584  Q
    ||||||||||||||| | |||  ||||||  |||||| ||||||||| |||||  |||| ||||||||||||||||||||||    
T  24626240 ataagctatttctataggaaaggataaaac-aaagttaaattgtttttgtatattctataagttgttttcataagctatctt 24626320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 529 - 611
Target Start/End: Complemental strand, 34910511 - 34910427
Alignment:
Q  529 aaaataaagtttaattgttttcgtata--agctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    ||||||| ||| |||||||||||||||  |||||| ||||||| |||||| || | || |||||||||||||| ||||| |||||    
T  34910511 aaaataatgttgaattgttttcgtatataagctataagttgttctcataatctgttttggagaacttatgaaagtaagcggaaaa 34910427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 496 - 604
Target Start/End: Complemental strand, 9559673 - 9559567
Alignment:
Q  496 cttatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttat 595  Q
    |||||||||||| ||||||||| | |||| || |||||||| || ||||||||||||| || |||  |  |||||||| ||||||||||  | |||||||    
T  9559673 cttatgtataagttatttctatagcaaaagat-aaaataaatttaaattgttttcgtagaaactacaaactgttttca-aagctatcttgaataacttat 9559576  T
Q  596 gaaaataag 604  Q
    |||||||||    
T  9559575 gaaaataag 9559567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 551 - 611
Target Start/End: Complemental strand, 19800514 - 19800454
Alignment:
Q  551 gtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    ||||||||||| |||| ||| ||||||||||| |||| || |||||||||||||| |||||    
T  19800514 gtataagctataagttttttacataagctatcctagaaaaattatgaaaataagctgaaaa 19800454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 529 - 605
Target Start/End: Complemental strand, 28621210 - 28621134
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagc 605  Q
    ||||||||||| ||||||||| ||||||||||  || ||||| |||| |||||||| |  | |||||||||||||||    
T  28621210 aaaataaagttaaattgtttttgtataagctacaagatgtttacataggctatcttggcaagcttatgaaaataagc 28621134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 530 - 582
Target Start/End: Original strand, 33828617 - 33828669
Alignment:
Q  530 aaataaagtttaattgttttcgtataagctattagttgttttcataagctatc 582  Q
    |||||||||  ||||||||||||||||| ||| ||||||||| ||||||||||    
T  33828617 aaataaagtcaaattgttttcgtataagttataagttgttttaataagctatc 33828669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 504 - 595
Target Start/End: Original strand, 1402942 - 1403032
Alignment:
Q  504 taagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttat 595  Q
    ||||||||||||||   |||| |||||| ||||||| || | ||||| |||||||||| | |||||||||||||||||| | |||| |||||    
T  1402942 taagctatttctataacaaaagataaaa-taaagttaaactattttcatataagctataaattgttttcataagctatcatggagatcttat 1403032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 544 - 599
Target Start/End: Complemental strand, 31327693 - 31327638
Alignment:
Q  544 tgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaa 599  Q
    ||||||| |||||||||| |||| ||| || |||||||||| ||||||||||||||    
T  31327693 tgttttcatataagctataagttatttccaaaagctatcttggagaacttatgaaa 31327638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 530 - 616
Target Start/End: Complemental strand, 8365075 - 8364989
Alignment:
Q  530 aaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaatagct 616  Q
    |||| ||||| |||||||||  |||||| ||| |  ||||||||||||||||| | | ||||| |||||||||||| ||||| ||||    
T  8365075 aaattaagttcaattgtttttatataagttataaactgttttcataagctatcatggtgaactgatgaaaataagctgaaaacagct 8364989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 497 - 605
Target Start/End: Complemental strand, 24836330 - 24836226
Alignment:
Q  497 ttatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatg 596  Q
    ||||||||||| |||||||||   |||| |||||| ||||||  |||||||||||||||| |||| |   |||||| ||||||||| | |||| ||||||    
T  24836330 ttatgtataagttatttctataacaaaagataaaa-taaagtcaaattgttttcgtataaactataa---gttttcgtaagctatcatggagagcttatg 24836235  T
Q  597 aaaataagc 605  Q
     ||||||||    
T  24836234 gaaataagc 24836226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 554 - 604
Target Start/End: Original strand, 31624085 - 31624135
Alignment:
Q  554 taagctattagttgttttcataagctatcttagagaacttatgaaaataag 604  Q
    |||||||| || |||||||||| |||||||| ||||| |||||||||||||    
T  31624085 taagctataagctgttttcataggctatcttggagaaattatgaaaataag 31624135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 541 - 611
Target Start/End: Complemental strand, 32386651 - 32386581
Alignment:
Q  541 aattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    |||||||||| |||||| |||  ||||||||||| || |||| | |||| ||||||||||||||| |||||    
T  32386651 aattgttttcatataaggtatacgttgttttcattagttatcctggagagcttatgaaaataagctgaaaa 32386581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 574 - 611
Target Start/End: Complemental strand, 161007 - 160970
Alignment:
Q  574 taagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    |||||||| ||||||||||||||||||||||| |||||    
T  161007 taagctatattagagaacttatgaaaataagctgaaaa 160970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 565 - 614
Target Start/End: Complemental strand, 2205654 - 2205605
Alignment:
Q  565 ttgttttcataagctatcttagagaacttatgaaaataagccgaaaatag 614  Q
    |||||||||||||||||||| |||| |||||| |||||||| ||| ||||    
T  2205654 ttgttttcataagctatcttggagagcttatggaaataagctgaatatag 2205605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 552 - 589
Target Start/End: Complemental strand, 2727933 - 2727896
Alignment:
Q  552 tataagctattagttgttttcataagctatcttagaga 589  Q
    |||||||||| |||||||||||||||||||| ||||||    
T  2727933 tataagctataagttgttttcataagctatcctagaga 2727896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 61; Significance: 8e-26; HSPs: 76)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 528 - 616
Target Start/End: Original strand, 21367636 - 21367724
Alignment:
Q  528 aaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaatagct 616  Q
    |||||||||||| ||||||||||||||||  ||| |||||||||||||||||||||| |||||||||||||||||||| ||||| ||||    
T  21367636 aaaaataaagttaaattgttttcgtataatgtataagttgttttcataagctatcttggagaacttatgaaaataagctgaaaacagct 21367724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 500 - 605
Target Start/End: Complemental strand, 44061151 - 44061047
Alignment:
Q  500 tgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaa 599  Q
    |||||||||||||||||| | |||| |||||| ||| ||| |||||||||  |||||||||| ||||||||||||| | |||||||||||||||||||||    
T  44061151 tgtataagctatttctatagcaaaagataaaa-taaggttaaattgtttttctataagctataagttgttttcatatgatatcttagagaacttatgaaa 44061053  T
Q  600 ataagc 605  Q
     |||||    
T  44061052 ttaagc 44061047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 496 - 604
Target Start/End: Complemental strand, 39602341 - 39602235
Alignment:
Q  496 cttatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttat 595  Q
    |||||| ||||||||||||||| |||||| |||| | ||||||| |||||||  |||||||| ||| || ||||||||||||||||||| ||||||||||    
T  39602341 cttatgcataagctatttctatagaaaaagataaca-taaagttaaattgttg-cgtataagttataagctgttttcataagctatctttgagaacttat 39602244  T
Q  596 gaaaataag 604  Q
    |||||||||    
T  39602243 gaaaataag 39602235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 503 - 596
Target Start/End: Complemental strand, 30956751 - 30956659
Alignment:
Q  503 ataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatg 596  Q
    ||||||||||||||| | |||| |||||| ||||||| ||||||||| ||||| ||||| ||||||||||| |||||||||| |||||||||||    
T  30956751 ataagctatttctatagcaaaagataaaa-taaagttaaattgtttttgtataggctataagttgttttcaaaagctatcttggagaacttatg 30956659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 503 - 596
Target Start/End: Complemental strand, 30972563 - 30972471
Alignment:
Q  503 ataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatg 596  Q
    ||||||||||||||| | |||| |||||| ||||||| ||||||||| ||||| ||||| ||||||||||| |||||||||| |||||||||||    
T  30972563 ataagctatttctatagcaaaagataaaa-taaagttaaattgtttttgtataggctataagttgttttcaaaagctatcttggagaacttatg 30972471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 529 - 605
Target Start/End: Original strand, 14145882 - 14145958
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagc 605  Q
    ||||||||||| ||||||||||||||| ||||| |||| ||||||||||||||||| ||  ||||||||||||||||    
T  14145882 aaaataaagttaaattgttttcgtatatgctataagttattttcataagctatcttggattacttatgaaaataagc 14145958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 496 - 616
Target Start/End: Complemental strand, 402673 - 402555
Alignment:
Q  496 cttatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttat 595  Q
    |||||||||||||||||||||| |||||| ||||   |||| || ||||||||||||||||| ||| || |||||| |||| |||||||  ||||||| |    
T  402673 cttatgtataagctatttctatagaaaaagataat--taaatttaaattgttttcgtataagttataagctgtttttataatctatcttgaagaacttgt 402576  T
Q  596 gaaaataagccgaaaatagct 616  Q
    |||| ||||| ||||| ||||    
T  402575 gaaattaagctgaaaacagct 402555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 505 - 605
Target Start/End: Original strand, 2719416 - 2719514
Alignment:
Q  505 aagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataag 604  Q
    ||||||||||||  | ||||||||||| ||||||  ||||||||| || |||||||| |  ||||||||||||||||||| |||||||||||||||||||    
T  2719416 aagctatttctaaagcaaaatataaaa-taaagtgaaattgtttt-gtttaagctataaactgttttcataagctatcttggagaacttatgaaaataag 2719513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 496 - 602
Target Start/End: Complemental strand, 34638097 - 34637998
Alignment:
Q  496 cttatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttat 595  Q
    ||||| |||||||||||||||| |||||| |||||| ||||||| ||||||||||||||||||       |||||||| |||||| ||| ||||| ||||    
T  34638097 cttatatataagctatttctatagaaaaagataaaattaaagttaaattgttttcgtataagc-------tgttttcaaaagctaccttggagaatttat 34638005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 529 - 611
Target Start/End: Complemental strand, 33405267 - 33405184
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaa-ataagccgaaaa 611  Q
    ||||||||||| | |||||||| |||||||||| || |||||||||||||||||||  |||||||||||||  |||||||||||    
T  33405267 aaaataaagttaatttgttttcatataagctataagctgttttcataagctatcttgaagaacttatgaaagttaagccgaaaa 33405184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 502 - 589
Target Start/End: Complemental strand, 36646508 - 36646422
Alignment:
Q  502 tataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagaga 589  Q
    |||||||||||||||||  |||| |||||| |||||| ||||||||||| |||||| ||| | |||||||||||||||||| ||||||    
T  36646508 tataagctatttctatgacaaaagataaaa-taaagtataattgttttcatataagttataacttgttttcataagctatcctagaga 36646422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 503 - 605
Target Start/End: Original strand, 21335620 - 21335721
Alignment:
Q  503 ataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaata 602  Q
    |||||||| || ||| |||||| |||||| ||||||||| ||||||| |||||  || | || ||||||||||||||||  |||||||||||||||||||    
T  21335620 ataagctaattttatagaaaaagataaaa-taaagtttagttgtttttgtatattctgtaagctgttttcataagctatactagagaacttatgaaaata 21335718  T
Q  603 agc 605  Q
    |||    
T  21335719 agc 21335721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 546 - 603
Target Start/End: Original strand, 22203417 - 22203474
Alignment:
Q  546 ttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataa 603  Q
    |||| |||||| |||| |||||||||||||||||||||| ||||||||||||||||||    
T  22203417 tttttgtataatctataagttgttttcataagctatcttggagaacttatgaaaataa 22203474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 503 - 616
Target Start/End: Complemental strand, 35959581 - 35959469
Alignment:
Q  503 ataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaata 602  Q
    ||||||||||||||| |||||  |||||| ||||||| |||| |||| ||||| ||| | ||||||||  ||||||||| |||||||| || ||||||||    
T  35959581 ataagctatttctatagaaaaggataaaa-taaagttaaattatttttgtatatgctgtaagttgtttctataagctatattagagaatttttgaaaata 35959483  T
Q  603 agccgaaaatagct 616  Q
    ||| ||||| ||||    
T  35959482 agctgaaaaaagct 35959469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 504 - 616
Target Start/End: Complemental strand, 36631175 - 36631064
Alignment:
Q  504 taagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataa 603  Q
    |||||||||||||| | |||  |||||  ||||||| ||||||||| ||| | ||||| ||||||||| || |||||| || ||||||||||||||||||    
T  36631175 taagctatttctatagtaaaggataaag-taaagttaaattgtttttgtacatgctataagttgtttttatgagctatattggagaacttatgaaaataa 36631077  T
Q  604 gccgaaaatagct 616  Q
    || ||||| ||||    
T  36631076 gcagaaaaaagct 36631064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 497 - 616
Target Start/End: Complemental strand, 36783466 - 36783347
Alignment:
Q  497 ttatgtataa-gctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttat 595  Q
    |||||||||| |||||||||||   |||| |||||| ||||||  |||||||||| ||||| ||||||| |||||||||||||||| || ||| | ||||    
T  36783466 ttatgtataaagctatttctataccaaaagataaaa-taaagtaaaattgttttcatataaactattagctgttttcataagctatattggagcaattat 36783368  T
Q  596 gaaaataagccgaaaatagct 616  Q
    ||| |||||| ||||| ||||    
T  36783367 gaatataagctgaaaacagct 36783347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 546 - 605
Target Start/End: Complemental strand, 18405914 - 18405855
Alignment:
Q  546 ttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagc 605  Q
    |||| ||||| ||||| |||||||||||||||||||||| |||||||||||||| |||||    
T  18405914 tttttgtatatgctataagttgttttcataagctatcttggagaacttatgaaattaagc 18405855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 564 - 611
Target Start/End: Complemental strand, 33883815 - 33883768
Alignment:
Q  564 gttgttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||    
T  33883815 gttgtttacataagctatcttagagaacttatgaaaataagctgaaaa 33883768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 534 - 616
Target Start/End: Complemental strand, 28622094 - 28622012
Alignment:
Q  534 aaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaatagct 616  Q
    |||||| | ||||||| || |||||||| || ||||||||||| ||||||| |||||||||||||||||| | ||||| ||||    
T  28622094 aaagttaagttgtttttgtgtaagctataagctgttttcataaactatcttcgagaacttatgaaaataacctgaaaacagct 28622012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 496 - 616
Target Start/End: Complemental strand, 30574044 - 30573927
Alignment:
Q  496 cttatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttat 595  Q
    ||||||||||||||||||||||  ||||| |||||| ||||||| | || ||||  ||||| ||||  | ||||||||||||||||||| |||| || ||    
T  30574044 cttatgtataagctatttctat--aaaaagataaaa-taaagttaagttttttttttataatctatatgatgttttcataagctatcttggagagctgat 30573948  T
Q  596 gaaaataagccgaaaatagct 616  Q
    ||| |||||| ||||| ||||    
T  30573947 gaacataagctgaaaacagct 30573927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 503 - 616
Target Start/End: Complemental strand, 53789586 - 53789474
Alignment:
Q  503 ataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaata 602  Q
    ||||||||||||||| | |||| || ||  |||| || || |||||| ||||| ||||| ||||||| |||||||||||| | |||||||||||||| ||    
T  53789586 ataagctatttctataggaaaagatgaac-taaaattaaaatgttttggtatatgctataagttgttatcataagctatcatggagaacttatgaaatta 53789488  T
Q  603 agccgaaaatagct 616  Q
    ||| ||||| ||||    
T  53789487 agctgaaaaaagct 53789474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 503 - 611
Target Start/End: Complemental strand, 3845687 - 3845580
Alignment:
Q  503 ataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaata 602  Q
    ||||||||||||||| || ||| |||||| ||| ||| || ||||||  |||| ||||   | |||||||||||| |||||| |||||||||||||||||    
T  3845687 ataagctatttctatagagaaagataaaattaa-gttgaaatgtttttctatatgctacatgctgttttcataagttatcttggagaacttatgaaaata 3845589  T
Q  603 agccgaaaa 611  Q
    ||| |||||    
T  3845588 agctgaaaa 3845580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 529 - 605
Target Start/End: Complemental strand, 20170808 - 20170732
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagc 605  Q
    ||||||||||| ||||||||||||| ||||||| |  ||||||| |||||||||||  ||| |||||| ||||||||    
T  20170808 aaaataaagttcaattgttttcgtaaaagctataaactgttttcctaagctatcttgtagagcttatgcaaataagc 20170732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 553 - 617
Target Start/End: Complemental strand, 50600254 - 50600190
Alignment:
Q  553 ataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaatagctc 617  Q
    ||||||||| || ||||||||| |||||| || |||||||||||||||||||| ||||| |||||    
T  50600254 ataagctataagctgttttcatcagctatattggagaacttatgaaaataagctgaaaacagctc 50600190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 529 - 604
Target Start/End: Complemental strand, 1217900 - 1217825
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataag 604  Q
    ||||| ||||| |||||||||| | |||| ||| || ||||||||||||||||| | |||||||||||||| ||||    
T  1217900 aaaatgaagttaaattgttttcatgtaagttataagctgttttcataagctatccttgagaacttatgaaagtaag 1217825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 496 - 611
Target Start/End: Original strand, 21661452 - 21661566
Alignment:
Q  496 cttatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttat 595  Q
    ||||||||||||||||||| ||   ||||||||||| |||| || ||||||||||| | ||| | | | |||||||||||| ||||  |||||| |||||    
T  21661452 cttatgtataagctatttcaataacaaaatataaaattaaa-ttaaattgttttcgcacaagttctaaattgttttcataatctattctagagagcttat 21661550  T
Q  596 gaaaataagccgaaaa 611  Q
     ||||||||| |||||    
T  21661551 aaaaataagcagaaaa 21661566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 529 - 616
Target Start/End: Original strand, 30443863 - 30443950
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaatagct 616  Q
    ||||| ||||| ||||| ||| ||||| ||||| || |||||| |||| |||| || |||||||||||||||||||| ||||| ||||    
T  30443863 aaaatgaagttaaattgcttttgtatatgctataagctgtttttataaactatattggagaacttatgaaaataagctgaaaaaagct 30443950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 568 - 611
Target Start/End: Complemental strand, 34924599 - 34924556
Alignment:
Q  568 ttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    |||||||||||||||||||||| ||||||||||||||| |||||    
T  34924599 ttttcataagctatcttagagagcttatgaaaataagctgaaaa 34924556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 568 - 611
Target Start/End: Original strand, 44488892 - 44488935
Alignment:
Q  568 ttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    ||||||||||||||||||||||||||||| |||||||| |||||    
T  44488892 ttttcataagctatcttagagaacttatggaaataagctgaaaa 44488935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 551 - 610
Target Start/End: Complemental strand, 44747486 - 44747427
Alignment:
Q  551 gtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaa 610  Q
    ||||| ||||| || ||||||||||||||||||| || ||||||||||||||||| ||||    
T  44747486 gtataggctataagctgttttcataagctatcttggaaaacttatgaaaataagctgaaa 44747427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 536 - 603
Target Start/End: Complemental strand, 46886785 - 46886718
Alignment:
Q  536 agtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataa 603  Q
    |||| |||| |||| |||| |||||| || ||||||||||||||||||| |||||||| |||||||||    
T  46886785 agttaaattatttttgtatgagctataagctgttttcataagctatcttggagaacttttgaaaataa 46886718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 503 - 605
Target Start/End: Original strand, 583991 - 584092
Alignment:
Q  503 ataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaata 602  Q
    ||||| ||||||||| |||||  |||||| ||||||| ||||||||| ||  | ||||| ||||  ||||||||||||||||  ||||||||||||| ||    
T  583991 ataagttatttctatagaaaatgataaaa-taaagttaaattgtttttgttcatgctataagttagtttcataagctatcttgaagaacttatgaaatta 584089  T
Q  603 agc 605  Q
    |||    
T  584090 agc 584092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 529 - 611
Target Start/End: Original strand, 1816553 - 1816635
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    ||||||||||  || |||||| ||||||| ||| |||||||||||||||||||  | |||| ||||| ||||||||| |||||    
T  1816553 aaaataaagtcaaactgtttttgtataagatataagttgttttcataagctatactggagagcttatcaaaataagctgaaaa 1816635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 529 - 595
Target Start/End: Complemental strand, 10101576 - 10101510
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttat 595  Q
    ||||||||||| |||||||||| |||||| ||  ||||||||||||||||  ||||||||| |||||    
T  10101576 aaaataaagttaaattgttttcatataagataaaagttgttttcataagccctcttagagagcttat 10101510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 529 - 595
Target Start/End: Complemental strand, 10212501 - 10212435
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttat 595  Q
    ||||||||||| |||||||||| |||||| ||  ||||||||||||||||  ||||||||| |||||    
T  10212501 aaaataaagttaaattgttttcatataagataaaagttgttttcataagccctcttagagagcttat 10212435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 529 - 611
Target Start/End: Complemental strand, 34610906 - 34610824
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    ||||| ||||| |||| |||| ||| ||| ||| ||||| |||||||||||||||| | |||||||||||||| ||| |||||    
T  34610906 aaaatgaagttaaattatttttgtacaagttataagttgctttcataagctatcttggcgaacttatgaaaatcagctgaaaa 34610824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 543 - 616
Target Start/End: Complemental strand, 22214745 - 22214672
Alignment:
Q  543 ttgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaatagct 616  Q
    |||||||| ||||| |||| |||||||||||||||||||| ||||||  ||| | |||||||| ||||| ||||    
T  22214745 ttgttttcatataacctataagttgttttcataagctatcctagagacattacggaaataagctgaaaacagct 22214672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 563 - 616
Target Start/End: Complemental strand, 26990557 - 26990504
Alignment:
Q  563 agttgttttcataagctatcttagagaacttatgaaaataagccgaaaatagct 616  Q
    |||||||||| ||||||||||  |||||||||||||||||||| ||||| ||||    
T  26990557 agttgttttcctaagctatctcggagaacttatgaaaataagctgaaaaaagct 26990504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 498 - 603
Target Start/End: Original strand, 36189506 - 36189610
Alignment:
Q  498 tatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatga 597  Q
    |||||||||||||||||| |   |||| |||||| ||||||| ||||||||| ||||| | ||| || | |||| ||||| ||| || ||||||||||||    
T  36189506 tatgtataagctatttctcttacaaaagataaaa-taaagttaaattgtttttgtatatgatataagctatttttataagatatattggagaacttatga 36189604  T
Q  598 aaataa 603  Q
    ||||||    
T  36189605 aaataa 36189610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 531 - 604
Target Start/End: Original strand, 39980701 - 39980774
Alignment:
Q  531 aataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataag 604  Q
    ||||| ||| ||||||||| | | | ||||| ||||||||| ||||||||| || |||||||||||||||||||    
T  39980701 aataacgttaaattgtttttgaacatgctataagttgtttttataagctatattggagaacttatgaaaataag 39980774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 500 - 605
Target Start/End: Complemental strand, 51510321 - 51510217
Alignment:
Q  500 tgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaa 599  Q
    |||||||| ||||||||||| |||| | |||| ||||||  |||| ||||  ||||| |||| ||||||||||||||| |||| | |||| |||||| ||    
T  51510321 tgtataaggtatttctatggcaaaaga-aaaagtaaagtaaaattattttgatataaactataagttgttttcataagttatcgtggagagcttatggaa 51510223  T
Q  600 ataagc 605  Q
    ||||||    
T  51510222 ataagc 51510217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 528 - 600
Target Start/End: Original strand, 20257504 - 20257576
Alignment:
Q  528 aaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaa 600  Q
    |||||||||||| ||||||||| ||||| ||||| |||||||||   ||||||| || |||| ||||||||||    
T  20257504 aaaaataaagttaaattgtttttgtatatgctataagttgttttttgaagctatattggagagcttatgaaaa 20257576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 535 - 603
Target Start/End: Original strand, 20669595 - 20669663
Alignment:
Q  535 aagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataa 603  Q
    ||||| |||||||||| |||||||||| | | |||||||||| |||||||||||| ||  |||||||||    
T  20669595 aagttaaattgttttcatataagctataattcgttttcataaactatcttagagagctcctgaaaataa 20669663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 503 - 611
Target Start/End: Complemental strand, 24684948 - 24684841
Alignment:
Q  503 ataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaata 602  Q
    ||||||||||| ||| |||||| |||||| |||| |||||||||||| ||||| ||||| ||||| ||| |||||| || |  |||| |||  |||||||    
T  24684948 ataagctatttttatagaaaaagataaaa-taaattttaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaata 24684850  T
Q  603 agccgaaaa 611  Q
    || ||||||    
T  24684849 agacgaaaa 24684841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 568 - 612
Target Start/End: Original strand, 25075075 - 25075119
Alignment:
Q  568 ttttcataagctatcttagagaacttatgaaaataagccgaaaat 612  Q
    ||||||||||||||| ||||||||| |||||||||||| ||||||    
T  25075075 ttttcataagctatcatagagaactaatgaaaataagctgaaaat 25075119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 508 - 584
Target Start/End: Complemental strand, 25447364 - 25447289
Alignment:
Q  508 ctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatctt 584  Q
    |||||||||| | |||| |||||| |||| || ||||||||| ||||||||||| |  |||||||||||||||||||    
T  25447364 ctatttctatagtaaaagataaaa-taaacttaaattgtttttgtataagctataaactgttttcataagctatctt 25447289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 563 - 611
Target Start/End: Original strand, 36887508 - 36887556
Alignment:
Q  563 agttgttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    |||||||||||||||| |||||  ||||||||||||||||||| |||||    
T  36887508 agttgttttcataagccatcttgaagaacttatgaaaataagctgaaaa 36887556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 529 - 581
Target Start/End: Original strand, 37788830 - 37788882
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctat 581  Q
    ||||||||||  |||| ||||||||||| |||| |||||||||||||||||||    
T  37788830 aaaataaagtccaattattttcgtataatctataagttgttttcataagctat 37788882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 530 - 605
Target Start/End: Original strand, 50952304 - 50952379
Alignment:
Q  530 aaataaagtttaattgttttcgtataagctat-tagttgttttcataagctatcttagagaacttatgaaaataagc 605  Q
    |||||||||| |||||||||| |||||||||| |||||||| | |||| ||||||| |||| |||||| ||||||||    
T  50952304 aaataaagtt-aattgttttcatataagctatatagttgttgtaataaactatcttggagagcttatggaaataagc 50952379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 533 - 604
Target Start/End: Original strand, 5436233 - 5436304
Alignment:
Q  533 taaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataag 604  Q
    |||||||||||||||||| |||||| | |  | ||||||||||  ||||||| |||||| ||||||||||||    
T  5436233 taaagtttaattgttttcatataagttgtatgctgttttcatagactatcttggagaacatatgaaaataag 5436304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 529 - 616
Target Start/End: Original strand, 10357403 - 10357490
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaatagct 616  Q
    ||||||| ||| |||| ||||| |||||| ||  |||||||||||||||| |||||||||| ||||   ||||||  |||||||||||    
T  10357403 aaaataatgttaaatttttttcatataagatacaagttgttttcataagccatcttagagagcttactgaaataactcgaaaatagct 10357490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 541 - 596
Target Start/End: Complemental strand, 12862335 - 12862281
Alignment:
Q  541 aattgttttcgtataagctattagttgttttcataagctatcttagagaacttatg 596  Q
    ||||||||| ||||| ||||| ||||||||||||||||||| || |||||||||||    
T  12862335 aattgtttt-gtatatgctataagttgttttcataagctatattggagaacttatg 12862281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 529 - 604
Target Start/End: Original strand, 20170493 - 20170568
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataag 604  Q
    ||||||| ||| ||||||||| ||||| ||||| ||||||||| | ||| ||| || ||||||| |||||||||||    
T  20170493 aaaataatgttaaattgtttttgtatatgctataagttgtttttacaagttatttttgagaactaatgaaaataag 20170568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 573 - 616
Target Start/End: Complemental strand, 28795909 - 28795866
Alignment:
Q  573 ataagctatcttagagaacttatgaaaataagccgaaaatagct 616  Q
    ||||||||| ||||||||||||||||||||||| ||||| ||||    
T  28795909 ataagctatattagagaacttatgaaaataagctgaaaagagct 28795866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 529 - 584
Target Start/End: Original strand, 37795566 - 37795621
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatctt 584  Q
    ||||||| ||| ||||||||||||||||||||| |  ||||| |||||||||||||    
T  37795566 aaaataaggttaaattgttttcgtataagctataaactgtttccataagctatctt 37795621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 541 - 616
Target Start/End: Original strand, 45541553 - 45541628
Alignment:
Q  541 aattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaatagct 616  Q
    |||| ||||||||||||||||   || ||||||||||||||||| || ||||||||| ||||| | ||||| ||||    
T  45541553 aattattttcgtataagctatagtttattttcataagctatcttggataacttatgagaataacctgaaaacagct 45541628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 541 - 604
Target Start/End: Original strand, 47132313 - 47132376
Alignment:
Q  541 aattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataag 604  Q
    ||||||||| ||||| |||||  |||||||| ||||||||| || ||||| |||||||||||||    
T  47132313 aattgtttttgtatatgctataggttgtttttataagctatattggagaagttatgaaaataag 47132376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 549 - 600
Target Start/End: Original strand, 49092769 - 49092820
Alignment:
Q  549 tcgtataagctattagttgttttcataagctatcttagagaacttatgaaaa 600  Q
    ||||||| ||| | ||||||||| ||||||||| ||||||||||||||||||    
T  49092769 tcgtatatgctgtaagttgtttttataagctatattagagaacttatgaaaa 49092820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 563 - 605
Target Start/End: Original strand, 2825151 - 2825193
Alignment:
Q  563 agttgttttcataagctatcttagagaacttatgaaaataagc 605  Q
    |||| ||||||||||||||||| |||| |||||||||||||||    
T  2825151 agttattttcataagctatcttggagagcttatgaaaataagc 2825193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 545 - 611
Target Start/End: Complemental strand, 14548805 - 14548739
Alignment:
Q  545 gttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    |||||| |||||||||| ||||||||||||||| |||  | |||| |||||| |||||||| |||||    
T  14548805 gttttcatataagctataagttgttttcataagttattctggagagcttatggaaataagctgaaaa 14548739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 566 - 616
Target Start/End: Original strand, 20669179 - 20669229
Alignment:
Q  566 tgttttcataagctatcttagagaacttatgaaaataagccgaaaatagct 616  Q
    ||||||||||||||||||| |||| |||||| |||||||| ||||| ||||    
T  20669179 tgttttcataagctatcttggagagcttatgtaaataagcggaaaacagct 20669229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 535 - 605
Target Start/End: Original strand, 20880452 - 20880522
Alignment:
Q  535 aagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagc 605  Q
    ||||| ||||||||| ||||| ||||| |  |||||| | ||||||| || ||||||||||||||||||||    
T  20880452 aagttaaattgtttttgtatatgctataaactgtttttaaaagctatattggagaacttatgaaaataagc 20880522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 553 - 611
Target Start/End: Complemental strand, 24085414 - 24085356
Alignment:
Q  553 ataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    ||||||||| | |||||||  ||||||||||| |||||||| ||||||||||| |||||    
T  24085414 ataagctataatttgtttttgtaagctatcttggagaacttgtgaaaataagctgaaaa 24085356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 528 - 574
Target Start/End: Original strand, 35450559 - 35450605
Alignment:
Q  528 aaaaataaagtttaattgttttcgtataagctattagttgttttcat 574  Q
    |||||||||||  |||||||||| |||||||||| ||||||||||||    
T  35450559 aaaaataaagtaaaattgttttcttataagctataagttgttttcat 35450605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 566 - 604
Target Start/End: Original strand, 37273141 - 37273179
Alignment:
Q  566 tgttttcataagctatcttagagaacttatgaaaataag 604  Q
    ||||||||||||||||||| ||||||||||| |||||||    
T  37273141 tgttttcataagctatcttggagaacttatggaaataag 37273179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 497 - 611
Target Start/End: Original strand, 38462220 - 38462333
Alignment:
Q  497 ttatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatg 596  Q
    |||| ||||||||||||||||   |||| |||||| ||||||  || ||||||| |||| ||||| |  |||||||||||||||||  ||| | ||||||    
T  38462220 ttatttataagctatttctataccaaaagataaaa-taaagtcaaactgttttcatatatgctataaactgttttcataagctatccaagatagcttatg 38462318  T
Q  597 aaaataagccgaaaa 611  Q
     |||||||| |||||    
T  38462319 gaaataagctgaaaa 38462333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 543 - 581
Target Start/End: Original strand, 41057022 - 41057060
Alignment:
Q  543 ttgttttcgtataagctattagttgttttcataagctat 581  Q
    |||||||| |||||||||| |||||||||||||||||||    
T  41057022 ttgttttcatataagctataagttgttttcataagctat 41057060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 496 - 616
Target Start/End: Original strand, 46030926 - 46031047
Alignment:
Q  496 cttatgtataagctatttctatggaaaaatataaaaataaagtt-taattgtttt-cgtataagctattagttgttttcataagctatcttagagaactt 593  Q
    ||||| ||||||||||||| || |||||| || |||||||||||  ||||||||| | ||||| || | || |||||  |||| ||||||| ||||||||    
T  46030926 cttatatataagctatttcgatagaaaaagat-aaaataaagttaaaattgttttccatataacctgtaagctgtttcaataaactatcttggagaactt 46031024  T
Q  594 atgaaaataagccgaaaatagct 616  Q
    || ||||||||| ||||| ||||    
T  46031025 attaaaataagctgaaaacagct 46031047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 550 - 604
Target Start/End: Complemental strand, 47319350 - 47319296
Alignment:
Q  550 cgtataagctattagttgttttcataagctatcttagagaacttatgaaaataag 604  Q
    ||||||| |||| || |||| |||||| |||||||||||| ||||||||||||||    
T  47319350 cgtataaactataagctgttgtcataatctatcttagagagcttatgaaaataag 47319296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 568 - 605
Target Start/End: Original strand, 466202 - 466239
Alignment:
Q  568 ttttcataagctatcttagagaacttatgaaaataagc 605  Q
    |||||||||||||| || ||||||||||||||||||||    
T  466202 ttttcataagctatgttggagaacttatgaaaataagc 466239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 564 - 605
Target Start/End: Original strand, 8933792 - 8933833
Alignment:
Q  564 gttgttttcataagctatcttagagaacttatgaaaataagc 605  Q
    |||||||||||||| |||||| |||| |||||||||||||||    
T  8933792 gttgttttcataagttatcttggagagcttatgaaaataagc 8933833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 566 - 611
Target Start/End: Complemental strand, 12985408 - 12985363
Alignment:
Q  566 tgttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    ||||||||||||||||| |  |||||||||| ||||||||||||||    
T  12985408 tgttttcataagctatcctcaagaacttatggaaataagccgaaaa 12985363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 496 - 605
Target Start/End: Original strand, 31403296 - 31403404
Alignment:
Q  496 cttatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttat 595  Q
    ||||| ||||||||||||| ||   |||| |||||| | ||||| || |||||||||||||| ||  |||||||||| |  |||||||| |||||| | |    
T  31403296 cttatatataagctatttccatatcaaaagataaaa-tgaagttaaaatgttttcgtataagatacaagttgttttcgttggctatcttggagaacctgt 31403394  T
Q  596 gaaaataagc 605  Q
    ||||||||||    
T  31403395 gaaaataagc 31403404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 544 - 605
Target Start/End: Complemental strand, 42734022 - 42733961
Alignment:
Q  544 tgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagc 605  Q
    |||||| ||||||||||| |||||||||||  ||||||| | |||| |||||| ||||||||    
T  42734022 tgtttttgtataagctataagttgttttcaccagctatcgtggagagcttatggaaataagc 42733961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 496 - 605
Target Start/End: Complemental strand, 49465795 - 49465689
Alignment:
Q  496 cttatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttat 595  Q
    ||||||| |||||||||| |||   |||| |||||| ||||||| |||| |||||||||| ||||   ||||||||||||||||||  | ||||||||||    
T  49465795 cttatgtgtaagctatttttataacaaaagataaaa-taaagtt-aatttttttcgtata-gctaaatgttgttttcataagctatactggagaacttat 49465699  T
Q  596 gaaaataagc 605  Q
    | ||||||||    
T  49465698 ggaaataagc 49465689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 542 - 611
Target Start/End: Complemental strand, 54837121 - 54837052
Alignment:
Q  542 attgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    |||||||| |||||| || | |||| ||||||||||||||||| || | ||||| ||||||||| |||||    
T  54837121 attgtttttgtataaactgtaagttattttcataagctatcttggacagcttataaaaataagcggaaaa 54837052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 1e-24; HSPs: 80)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 476 - 616
Target Start/End: Original strand, 18066049 - 18066185
Alignment:
Q  476 agcttatagcataagtgcttcttatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcata 575  Q
    ||||||||||||||| |||    ||||| ||||||||||||  | ||||||| ||| ||||||| |||||||||| |||||||||| || ||||||||||    
T  18066049 agcttatagcataagcgctc---atgtagaagctatttctacagtaaaatatgaaa-taaagttaaattgttttcatataagctataagctgttttcata 18066144  T
Q  576 agctatcttagagaacttatgaaaataagccgaaaatagct 616  Q
    ||||||||| ||||||||| |||||||||  ||||||||||    
T  18066145 agctatcttggagaacttaagaaaataaggtgaaaatagct 18066185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 497 - 611
Target Start/End: Original strand, 42457887 - 42458000
Alignment:
Q  497 ttatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatg 596  Q
    |||||||||| |||||||||| | |||| |||||| ||||||| ||||||||| || |||||| |||| ||| |||||||||||||||||||||| ||||    
T  42457887 ttatgtataatctatttctatagtaaaagataaaa-taaagttaaattgtttttgtttaagctcttagctgtattcataagctatcttagagaacatatg 42457985  T
Q  597 aaaataagccgaaaa 611  Q
    ||||||||| |||||    
T  42457986 aaaataagctgaaaa 42458000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 530 - 611
Target Start/End: Original strand, 1625871 - 1625952
Alignment:
Q  530 aaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    |||||||||| ||||||||||||||||| ||| |||||||||||||||||||||| ||||||||| |||||| ||| |||||    
T  1625871 aaataaagttaaattgttttcgtataagttataagttgttttcataagctatcttggagaacttacgaaaatcagctgaaaa 1625952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 503 - 616
Target Start/End: Complemental strand, 12464598 - 12464486
Alignment:
Q  503 ataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaata 602  Q
    ||||||||||||| | |||||| |||||| ||||||| ||||||||| ||||| ||||| || | ||||||||||||||||| |||||||| ||||||||    
T  12464598 ataagctatttctgtagaaaaagataaaa-taaagttaaattgtttttgtatatgctataagctattttcataagctatcttggagaacttgtgaaaata 12464500  T
Q  603 agccgaaaatagct 616  Q
    ||| ||||| ||||    
T  12464499 agctgaaaaaagct 12464486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 529 - 616
Target Start/End: Original strand, 11513868 - 11513955
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaatagct 616  Q
    ||||||||||  |||||||||| |||||||||| |||||||||||||||||||| | |||||||| || |||||||| ||||||||||    
T  11513868 aaaataaagtcaaattgttttcatataagctataagttgttttcataagctatcatggagaacttttggaaataagctgaaaatagct 11513955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 529 - 614
Target Start/End: Original strand, 40279167 - 40279252
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaatag 614  Q
    ||||| ||||| ||||||||| ||||||| ||| ||||||||||||||||||| || |||||||||||||||| ||| ||||||||    
T  40279167 aaaatgaagttaaattgttttggtataagatataagttgttttcataagctatgttggagaacttatgaaaattagctgaaaatag 40279252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 496 - 616
Target Start/End: Original strand, 9174752 - 9174872
Alignment:
Q  496 cttatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttat 595  Q
    |||||||||||||||||||||| | | || | ||||||| |||| ||| | |||| |||   |||| || |||||||||||||||||||| ||| |||||    
T  9174752 cttatgtataagctatttctatagcacaagaaaaaaatatagttaaatagctttcatatttactataagctgttttcataagctatcttacagagcttat 9174851  T
Q  596 gaaaataagccgaaaatagct 616  Q
    |||||||||| ||||||||||    
T  9174852 gaaaataagctgaaaatagct 9174872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 521 - 603
Target Start/End: Original strand, 26626835 - 26626917
Alignment:
Q  521 aaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataa 603  Q
    |||| ||||||  |||||| ||||||||||||||||||||  || |||||||||||||||||||  |||||||||||||||||    
T  26626835 aaaagataaaacgaaagttaaattgttttcgtataagctagaagctgttttcataagctatcttgcagaacttatgaaaataa 26626917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 541 - 611
Target Start/End: Original strand, 680485 - 680555
Alignment:
Q  541 aattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    ||||||||||||||||||||| || | |||||||||||||||||  ||||||| ||||||||||| |||||    
T  680485 aattgttttcgtataagctataagctattttcataagctatcttgaagaacttgtgaaaataagctgaaaa 680555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 500 - 613
Target Start/End: Complemental strand, 26143769 - 26143656
Alignment:
Q  500 tgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataag-ctattagttgttttcataagctatcttagagaacttatgaa 598  Q
    |||||||||||||||||| | |||| |||||| ||||||| |||| | |||||| ||  || | || ||||||||||||||| ||| |||||||||||||    
T  26143769 tgtataagctatttctatagcaaaagataaaa-taaagttcaattatattcgtaaaaaactgtaagctgttttcataagctaacttggagaacttatgaa 26143671  T
Q  599 aataagccgaaaata 613  Q
    ||||||| |||||||    
T  26143670 aataagctgaaaata 26143656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 531 - 605
Target Start/End: Original strand, 41851507 - 41851581
Alignment:
Q  531 aataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagc 605  Q
    ||||||||| ||||||||| ||||| ||||| ||||||||||| |||||||||| ||||| |||||||| |||||    
T  41851507 aataaagttaaattgtttttgtatatgctataagttgttttcagaagctatcttggagaatttatgaaattaagc 41851581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 503 - 616
Target Start/End: Original strand, 45229457 - 45229568
Alignment:
Q  503 ataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaata 602  Q
    ||||||||||||||| | |||  |||||| | | ||| ||||||||| ||||| | ||| | |||||||||||||||||||| |||||||||||||||||    
T  45229457 ataagctatttctatagcaaacgataaaa-tgaggttaaattgtttttgtatatgttatca-ttgttttcataagctatcttcgagaacttatgaaaata 45229554  T
Q  603 agccgaaaatagct 616  Q
    ||| ||||| ||||    
T  45229555 agctgaaaaaagct 45229568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 541 - 605
Target Start/End: Complemental strand, 22681273 - 22681209
Alignment:
Q  541 aattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagc 605  Q
    |||||||||| |||||||||| || ||||||||||| ||||| ||||||||||||| ||||||||    
T  22681273 aattgttttcatataagctataagctgttttcataatctatcctagagaacttatggaaataagc 22681209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 546 - 614
Target Start/End: Complemental strand, 43985086 - 43985018
Alignment:
Q  546 ttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaatag 614  Q
    |||||||||||  ||| ||||||||||||||||||||||  ||| ||||||||||||||| ||||||||    
T  43985086 ttttcgtataaattataagttgttttcataagctatcttgaagagcttatgaaaataagctgaaaatag 43985018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 541 - 604
Target Start/End: Complemental strand, 656865 - 656802
Alignment:
Q  541 aattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataag 604  Q
    ||||||||||||||||||| | ||||| ||||||||||||||||  ||| ||||||||||||||    
T  656865 aattgttttcgtataagctgtaagttgatttcataagctatcttgcagagcttatgaaaataag 656802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 529 - 611
Target Start/End: Original strand, 8017404 - 8017486
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    |||| |||||| |||| ||||| |||||||| | |  ||||||||||||||||||| ||||||||||||||||| || |||||    
T  8017404 aaaacaaagttaaattattttcatataagctgtaaactgttttcataagctatcttggagaacttatgaaaatacgcagaaaa 8017486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 526 - 584
Target Start/End: Original strand, 9750913 - 9750971
Alignment:
Q  526 ataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatctt 584  Q
    |||||||||||||| |||||||||| |||||||||| |||||||||||| ||| |||||    
T  9750913 ataaaaataaagttaaattgttttcttataagctataagttgttttcatgagcaatctt 9750971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 546 - 616
Target Start/End: Complemental strand, 18179323 - 18179253
Alignment:
Q  546 ttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaatagct 616  Q
    ||||| |||||||||| || || |||||||||||||| | ||||||||| |||||||||| ||||||||||    
T  18179323 ttttcatataagctataagctgctttcataagctatcctggagaacttacgaaaataagctgaaaatagct 18179253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 529 - 611
Target Start/End: Complemental strand, 29316875 - 29316793
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    ||||||| ||| ||||||||||  |||| |||| || ||||||||| ||||||||| ||||||||||| |||||||| |||||    
T  29316875 aaaataaggttaaattgttttcacataatctataagctgttttcatcagctatcttggagaacttatggaaataagctgaaaa 29316793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 546 - 616
Target Start/End: Original strand, 39983329 - 39983399
Alignment:
Q  546 ttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaatagct 616  Q
    ||||| |||||||||| |||||||||||||||||||| | |||| || |||||||||| | ||||||||||    
T  39983329 ttttcatataagctataagttgttttcataagctatcctggagagctaatgaaaataaactgaaaatagct 39983399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 496 - 605
Target Start/End: Original strand, 3611164 - 3611272
Alignment:
Q  496 cttatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttat 595  Q
    |||||||||||| ||||||||| | ||||  ||||| ||||||| ||||||||| |||||   |||    |||||||| |||||||||| ||||||||||    
T  3611164 cttatgtataagttatttctatagcaaaaggtaaaa-taaagttaaattgtttttgtatagtttatagactgttttcacaagctatcttggagaacttat 3611262  T
Q  596 gaaaataagc 605  Q
    ||||||||||    
T  3611263 gaaaataagc 3611272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 542 - 611
Target Start/End: Complemental strand, 29628830 - 29628761
Alignment:
Q  542 attgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    |||||||| ||||||||||| ||||||| |||||||||||||| || || ||||| |||||||| |||||    
T  29628830 attgtttttgtataagctataagttgttctcataagctatcttggaaaatttatggaaataagctgaaaa 29628761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 503 - 604
Target Start/End: Original strand, 32592532 - 32592631
Alignment:
Q  503 ataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaata 602  Q
    |||| |||||| ||| |||||| |||||| ||| ||| ||||||||| ||||| ||||| ||||||||| |||||| || || |||||||||||||||||    
T  32592532 ataaactatttttatagaaaaagataaaa-taatgttaaattgtttt-gtatacgctataagttgtttttataagcaatattggagaacttatgaaaata 32592629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 503 - 616
Target Start/End: Complemental strand, 41241257 - 41241145
Alignment:
Q  503 ataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaata 602  Q
    ||||||||||||||| | |||| || ||||| ||||| ||||||||| ||||| ||||| ||| |||||| |||| |||||| || ||||| ||||| ||    
T  41241257 ataagctatttctataggaaaagat-aaaatgaagttaaattgtttttgtatatgctataagtagttttcctaagttatcttggaaaacttgtgaaatta 41241159  T
Q  603 agccgaaaatagct 616  Q
    ||| ||||| ||||    
T  41241158 agctgaaaaaagct 41241145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 528 - 602
Target Start/End: Original strand, 42907328 - 42907404
Alignment:
Q  528 aaaaataaagtttaattgttttcgtataagctattagttgtttt--cataagctatcttagagaacttatgaaaata 602  Q
    |||||||||||| |||||||||||| |||||||| |||||||||  |||| |||| ||| |||| ||||||||||||    
T  42907328 aaaaataaagttaaattgttttcgtttaagctataagttgttttcacatatgctaacttggagagcttatgaaaata 42907404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 496 - 616
Target Start/End: Original strand, 2416251 - 2416370
Alignment:
Q  496 cttatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttat 595  Q
    |||||||||||| ||||||| | | |||| |||||| | ||||| |||||||||  |||||||||| || |||||| ||||| ||| | |||||||||||    
T  2416251 cttatgtataagttatttctgtagcaaaagataaaa-tgaagttaaattgttttgatataagctataagctgtttttataagttatataagagaacttat 2416349  T
Q  596 gaaaataagccgaaaatagct 616  Q
    |||| || || |||| |||||    
T  2416350 gaaagtatgctgaaattagct 2416370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 496 - 584
Target Start/End: Original strand, 3673745 - 3673832
Alignment:
Q  496 cttatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatctt 584  Q
    ||||||||| || |||||||||   ||||||||||| ||||||| |||||||||| |||||| ||| |||| ||||||| |||||||||    
T  3673745 cttatgtattagttatttctataacaaaatataaaa-taaagttaaattgttttcatataagttataagtttttttcattagctatctt 3673832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 496 - 616
Target Start/End: Original strand, 5133710 - 5133829
Alignment:
Q  496 cttatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttat 595  Q
    ||||||||||||||||||||||   |||| || ||||||||| | || ||||||  |||||| ||| || |||||||| ||| ||||| ||||| |||||    
T  5133710 cttatgtataagctatttctataacaaaagat-aaaataaagataaactgtttttatataagatataagctgttttcaaaagttatctaagagagcttat 5133808  T
Q  596 gaaaataagccgaaaatagct 616  Q
    | |||||||| |||| |||||    
T  5133809 ggaaataagctgaaagtagct 5133829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 529 - 605
Target Start/End: Complemental strand, 6167383 - 6167307
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagc 605  Q
    ||||||||||  ||||| |||||| |||||||| || |||||| ||||||||| || ||||||||||| ||||||||    
T  6167383 aaaataaagtgaaattgctttcgtttaagctataagctgtttttataagctattttggagaacttatggaaataagc 6167307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 532 - 583
Target Start/End: Original strand, 423552 - 423603
Alignment:
Q  532 ataaagtttaattgttttcgtataagctattagttgttttcataagctatct 583  Q
    |||||||||||| ||||| |||||||||||  ||||||||||||||||||||    
T  423552 ataaagtttaatagttttggtataagctatatgttgttttcataagctatct 423603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 529 - 604
Target Start/End: Complemental strand, 12313273 - 12313198
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataag 604  Q
    ||||||||||| |||| |||| || |||||||  | |||||| ||||||||||||| |||| ||||||||||||||    
T  12313273 aaaataaagttaaattatttttgtttaagctacaaattgtttacataagctatcttggagagcttatgaaaataag 12313198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 552 - 611
Target Start/End: Original strand, 29510585 - 29510644
Alignment:
Q  552 tataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    ||||| |||| |||||||||| ||||||||||| |||| ||||||||| |||||||||||    
T  29510585 tataaactataagttgttttcctaagctatctttgagagcttatgaaattaagccgaaaa 29510644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 529 - 616
Target Start/End: Original strand, 33942120 - 33942207
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaatagct 616  Q
    ||||||||||  || ||||||| | |||||||| |||||||||||||||| ||| |||||| || |||||||| ||| ||||| ||||    
T  33942120 aaaataaagtcaaactgttttcatgtaagctataagttgttttcataagccatcatagagagctaatgaaaattagctgaaaacagct 33942207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 542 - 613
Target Start/End: Complemental strand, 35378619 - 35378548
Alignment:
Q  542 attgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaata 613  Q
    |||| |||||||||| ||||||| ||||||| ||||| ||||| || | ||||||||||||||| |||||||    
T  35378619 attgatttcgtataatctattagctgttttcgtaagcaatcttggatagcttatgaaaataagctgaaaata 35378548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 547 - 613
Target Start/End: Complemental strand, 1893363 - 1893297
Alignment:
Q  547 tttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaata 613  Q
    ||||||| ||||||| || |||||||  |||||||||| |||||||| ||||||||||| |||||||    
T  1893363 tttcgtaaaagctataagctgttttcggaagctatcttggagaacttgtgaaaataagctgaaaata 1893297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 566 - 616
Target Start/End: Complemental strand, 33319875 - 33319825
Alignment:
Q  566 tgttttcataagctatcttagagaacttatgaaaataagccgaaaatagct 616  Q
    ||||||||||| ||||||| |||||||||||||||||||| ||||| ||||    
T  33319875 tgttttcataaactatcttggagaacttatgaaaataagctgaaaaaagct 33319825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 565 - 611
Target Start/End: Complemental strand, 35993444 - 35993398
Alignment:
Q  565 ttgttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    |||||| ||||||||||| |||||||||||||||||||||| |||||    
T  35993444 ttgtttgcataagctatcatagagaacttatgaaaataagctgaaaa 35993398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 543 - 605
Target Start/End: Complemental strand, 41875739 - 41875677
Alignment:
Q  543 ttgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagc 605  Q
    ||||||||||||||||| | || ||||||||||||||||||| | || |||| ||||||||||    
T  41875739 ttgttttcgtataagctgtaagctgttttcataagctatcttggtgagcttaagaaaataagc 41875677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 544 - 605
Target Start/End: Original strand, 750656 - 750716
Alignment:
Q  544 tgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagc 605  Q
    ||||| |||||||||||| || ||||| ||||||||||||| ||||||||||| ||||||||    
T  750656 tgtttacgtataagctatgagctgttt-cataagctatcttggagaacttatgcaaataagc 750716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 499 - 616
Target Start/End: Original strand, 9395071 - 9395187
Alignment:
Q  499 atgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaa 598  Q
    ||||||||| | ||||||| |||||| |||||| ||||| | |||||||||| ||||| |||| || ||||||||| || |||  |  ||| ||||||||    
T  9395071 atgtataagatttttctatagaaaaagataaaa-taaagctaaattgttttcatataatctataagctgttttcattagttattctgtagagcttatgaa 9395169  T
Q  599 aataagccgaaaatagct 616  Q
    ||||||| ||||| ||||    
T  9395170 aataagctgaaaacagct 9395187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 566 - 611
Target Start/End: Complemental strand, 35379079 - 35379034
Alignment:
Q  566 tgttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    ||||||||||||||||||| |||| ||||||||||||||| |||||    
T  35379079 tgttttcataagctatcttggagagcttatgaaaataagctgaaaa 35379034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 496 - 605
Target Start/End: Original strand, 36114357 - 36114465
Alignment:
Q  496 cttatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttat 595  Q
    ||||| ||| |||||||| ||||  |||| |||||| ||||||| ||||||||| |||| |||||  | | | |||||||||||||||| |||| |||||    
T  36114357 cttatatattagctatttttatgacaaaagataaaa-taaagttaaattgtttttgtattagctaaaaataggtttcataagctatcttggagatcttat 36114455  T
Q  596 gaaaataagc 605  Q
     |||||||||    
T  36114456 aaaaataagc 36114465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 563 - 604
Target Start/End: Original strand, 40279411 - 40279452
Alignment:
Q  563 agttgttttcataagctatcttagagaacttatgaaaataag 604  Q
    ||||||||||||||||||| || |||||||||||||||||||    
T  40279411 agttgttttcataagctatattggagaacttatgaaaataag 40279452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 529 - 582
Target Start/End: Original strand, 43199384 - 43199437
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatc 582  Q
    ||||||||||| |||| | |||||||||||||| |||||||||||||| |||||    
T  43199384 aaaataaagttaaattatcttcgtataagctataagttgttttcataaactatc 43199437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 500 - 605
Target Start/End: Original strand, 43570356 - 43570460
Alignment:
Q  500 tgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaa 599  Q
    ||||||||||| |||||| | ||||||||||| | ||||| |||||||||| | ||||||||  ||| | ||||||||| ||| | || | |||||||||    
T  43570356 tgtataagctaattctatagtaaaatataaaa-tgaagttaaattgttttcatttaagctatacgttatcttcataagccatcctggaaagcttatgaaa 43570454  T
Q  600 ataagc 605  Q
    ||||||    
T  43570455 ataagc 43570460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 534 - 611
Target Start/End: Complemental strand, 43911094 - 43911017
Alignment:
Q  534 aaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    |||||| |||||||| ||||||||| || ||||||||||| |||||||||| || | ||| ||| ||||||| |||||    
T  43911094 aaagttaaattgtttccgtataagccataagttgttttcaaaagctatcttggaaagcttgtgataataagctgaaaa 43911017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 568 - 604
Target Start/End: Complemental strand, 10646350 - 10646314
Alignment:
Q  568 ttttcataagctatcttagagaacttatgaaaataag 604  Q
    |||||||||||||| ||||||||||||||||||||||    
T  10646350 ttttcataagctattttagagaacttatgaaaataag 10646314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 529 - 616
Target Start/End: Complemental strand, 15757759 - 15757671
Alignment:
Q  529 aaaataaagtttaattgttttc-gtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaatagct 616  Q
    ||||||||||| |||||||||  ||||| ||||| |||||| || |||||||||   ||||||| ||||||||||||| ||||| ||||    
T  15757759 aaaataaagttaaattgttttttgtatatgctataagttgtatttataagctatacaagagaacgtatgaaaataagctgaaaaaagct 15757671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 529 - 605
Target Start/End: Complemental strand, 17221640 - 17221564
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagc 605  Q
    ||||||||||  ||||||| || ||||||||||||  |||||||||||||||||  ||||| |||| | ||||||||    
T  17221640 aaaataaagtcaaattgttctcatataagctattaagtgttttcataagctatccgagagatcttacggaaataagc 17221564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 541 - 577
Target Start/End: Complemental strand, 23143066 - 23143030
Alignment:
Q  541 aattgttttcgtataagctattagttgttttcataag 577  Q
    |||||||||| ||||||||||||||||||||||||||    
T  23143066 aattgttttcttataagctattagttgttttcataag 23143030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 541 - 577
Target Start/End: Complemental strand, 23554856 - 23554820
Alignment:
Q  541 aattgttttcgtataagctattagttgttttcataag 577  Q
    |||||||||| ||||||||||||||||||||||||||    
T  23554856 aattgttttcttataagctattagttgttttcataag 23554820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 497 - 577
Target Start/End: Complemental strand, 35755633 - 35755554
Alignment:
Q  497 ttatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataag 577  Q
    |||||||||||||||||||||    |||||  ||||||||||  |||||||||| | |||||||| |||||||||||||||    
T  35755633 ttatgtataagctatttctataatcaaata-gaaaataaagtcaaattgttttcatgtaagctataagttgttttcataag 35755554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 552 - 604
Target Start/End: Complemental strand, 36863702 - 36863650
Alignment:
Q  552 tataagctattagttgttttcataagctatcttagagaacttatgaaaataag 604  Q
    |||||| ||| | |||||||||||||||||||| |||| ||||||||||||||    
T  36863702 tataagttataaattgttttcataagctatcttggagagcttatgaaaataag 36863650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 563 - 611
Target Start/End: Original strand, 40279271 - 40279319
Alignment:
Q  563 agttgttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    ||||||||||||||||||| || |||||||||||||||| ||| |||||    
T  40279271 agttgttttcataagctatattggagaacttatgaaaattagctgaaaa 40279319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 563 - 611
Target Start/End: Original strand, 40279341 - 40279389
Alignment:
Q  563 agttgttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    ||||||||||||||||||| || |||||||||||||||| ||| |||||    
T  40279341 agttgttttcataagctatattggagaacttatgaaaattagctgaaaa 40279389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 529 - 584
Target Start/End: Original strand, 914051 - 914106
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatctt 584  Q
    |||||||| ||| ||||||||| ||||| |||| | ||||||||||||||||||||    
T  914051 aaaataaaatttgattgttttcttataaactatgatttgttttcataagctatctt 914106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 496 - 611
Target Start/End: Original strand, 4026755 - 4026869
Alignment:
Q  496 cttatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttat 595  Q
    ||||| |||||||||||| ||| | |||| |||||| ||||||| |||| |||| | ||||  ||| || |||||||||||  |||| |  |||||||||    
T  4026755 cttatctataagctatttttatagcaaaagataaaa-taaagttaaattatttttgcataaattataagctgttttcataaattatcctgaagaacttat 4026853  T
Q  596 gaaaataagccgaaaa 611  Q
    |||||||||| |||||    
T  4026854 gaaaataagctgaaaa 4026869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 530 - 581
Target Start/End: Complemental strand, 5759674 - 5759623
Alignment:
Q  530 aaataaagtttaattgttttcgtataagctattagttgttttcataagctat 581  Q
    ||||||||| ||| |||||||||||| ||||| || ||||||||||||||||    
T  5759674 aaataaagtctaaatgttttcgtatatgctataagctgttttcataagctat 5759623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 549 - 604
Target Start/End: Original strand, 9477942 - 9477997
Alignment:
Q  549 tcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataag 604  Q
    ||||||||| ||| |||||||||||||||||||| | ||||  |||||||||||||    
T  9477942 tcgtataagttataagttgttttcataagctatcctggagaggttatgaaaataag 9477997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 496 - 571
Target Start/End: Original strand, 25609734 - 25609808
Alignment:
Q  496 cttatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgtttt 571  Q
    ||||||||||||||||||||||   |||| |||||| ||||||  | || |||||||||||||||| |||||||||    
T  25609734 cttatgtataagctatttctataagaaaagataaaa-taaagtcaatttattttcgtataagctataagttgtttt 25609808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 541 - 584
Target Start/End: Original strand, 25800811 - 25800854
Alignment:
Q  541 aattgttttcgtataagctattagttgttttcataagctatctt 584  Q
    |||||||||| |||||||||| || |||||||||||||||||||    
T  25800811 aattgttttcatataagctataagctgttttcataagctatctt 25800854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 541 - 604
Target Start/End: Original strand, 33941891 - 33941954
Alignment:
Q  541 aattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataag 604  Q
    ||||||||| ||||||| ||| | |||||||||||||||||||| ||||  |||||| ||||||    
T  33941891 aattgtttttgtataagttataacttgttttcataagctatcttggagagtttatgataataag 33941954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 546 - 604
Target Start/End: Complemental strand, 938593 - 938535
Alignment:
Q  546 ttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataag 604  Q
    ||||| |||||||||| ||  || |||||||||||||||||||| ||| ||||||||||    
T  938593 ttttcatataagctataagcggtattcataagctatcttagagagcttctgaaaataag 938535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 541 - 611
Target Start/End: Original strand, 1810647 - 1810716
Alignment:
Q  541 aattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    ||||||||| ||||||| ||| ||||||||| ||||||||||||  |||  |||||||||||||| |||||    
T  1810647 aattgtttttgtataagttat-agttgtttttataagctatcttgaagagtttatgaaaataagctgaaaa 1810716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 496 - 594
Target Start/End: Original strand, 3102631 - 3102728
Alignment:
Q  496 cttatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaactta 594  Q
    |||||||||||||||||| ||| | ||||||| ||||||||||  || | ||||  ||||| ||||||| |||||||||||  |||| | |||||||||    
T  3102631 cttatgtataagctatttttatagcaaaatat-aaaataaagtcaaactatttttatataatctattagctgttttcataatttatcatggagaactta 3102728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 566 - 604
Target Start/End: Complemental strand, 10884584 - 10884546
Alignment:
Q  566 tgttttcataagctatcttagagaacttatgaaaataag 604  Q
    ||||||||||||||||| |||||| ||||||||||||||    
T  10884584 tgttttcataagctatcctagagagcttatgaaaataag 10884546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 526 - 604
Target Start/End: Original strand, 31096268 - 31096346
Alignment:
Q  526 ataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataag 604  Q
    |||||| ||||||  || ||||||| | ||||||| |||||| ||||| | ||||||||  ||||||||||||||||||    
T  31096268 ataaaattaaagtcaaactgttttcatttaagctaatagttgctttcacaggctatctttaagaacttatgaaaataag 31096346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 529 - 603
Target Start/End: Complemental strand, 37292447 - 37292373
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataa 603  Q
    ||||||||||  || | ||||| ||||||||||||||||||||| ||||||||| | ||||  |||||| |||||    
T  37292447 aaaataaagtaaaactattttcatataagctattagttgttttcttaagctatcctggagagtttatgacaataa 37292373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 553 - 611
Target Start/End: Original strand, 44590028 - 44590086
Alignment:
Q  553 ataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    ||||| ||| ||||||||||||||||||||||  ||||||| ||| ||||||| |||||    
T  44590028 ataagttataagttgttttcataagctatcttgaagaacttgtgagaataagctgaaaa 44590086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 529 - 605
Target Start/End: Original strand, 2142623 - 2142700
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatctt-agagaacttatgaaaataagc 605  Q
    ||||||||| |  ||| |||| ||||||||||| ||||||||||||||  ||||||  ||||| ||||||||||||||    
T  2142623 aaaataaagctagattatttttgtataagctataagttgttttcataatttatcttgggagaatttatgaaaataagc 2142700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 572 - 605
Target Start/End: Original strand, 4606938 - 4606971
Alignment:
Q  572 cataagctatcttagagaacttatgaaaataagc 605  Q
    ||||||||||||| ||||||||||||||||||||    
T  4606938 cataagctatcttggagaacttatgaaaataagc 4606971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 529 - 582
Target Start/End: Complemental strand, 5043660 - 5043607
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatc 582  Q
    ||||||||||  || ||||||| |||||||||  ||||||||||||||||||||    
T  5043660 aaaataaagtcaaactgttttcatataagctagaagttgttttcataagctatc 5043607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 552 - 605
Target Start/End: Complemental strand, 6993801 - 6993748
Alignment:
Q  552 tataagctattagttgttttcataagctatcttagagaacttatgaaaataagc 605  Q
    ||||||||||  ||||||||||||||||||  | |||| |||||||||||||||    
T  6993801 tataagctataggttgttttcataagctatgcttgagagcttatgaaaataagc 6993748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 529 - 605
Target Start/End: Complemental strand, 7103583 - 7103506
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgtttt-cataagctatcttagagaacttatgaaaataagc 605  Q
    ||||||||||  || ||||||  |||||||||| || |||||| ||||||||||||||||||  || |||||||||||    
T  7103583 aaaataaagtcaaactgttttaatataagctataagctgtttttcataagctatcttagagagtttgtgaaaataagc 7103506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 547 - 604
Target Start/End: Original strand, 10285848 - 10285905
Alignment:
Q  547 tttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataag 604  Q
    |||| |||||||||| ||| |||| ||||||||| | ||||||||||||| |||||||    
T  10285848 tttcatataagctataagtcgtttgcataagctaacatagagaacttatggaaataag 10285905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 546 - 603
Target Start/End: Original strand, 16353848 - 16353905
Alignment:
Q  546 ttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataa 603  Q
    ||||| |||||||||| || |||||| |||||||||||| |||| ||| |||||||||    
T  16353848 ttttcatataagctataagctgtttttataagctatcttggagatcttgtgaaaataa 16353905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 529 - 582
Target Start/End: Original strand, 29300615 - 29300668
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatc 582  Q
    ||||||||| | |||||||||| | |||| ||| ||||||||||||||||||||    
T  29300615 aaaataaaggtgaattgttttcatgtaagttataagttgttttcataagctatc 29300668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 544 - 605
Target Start/End: Original strand, 37474741 - 37474802
Alignment:
Q  544 tgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagc 605  Q
    ||||||| ||||| |||| | |||||||  ||||||||| |||||||||||||| |||||||    
T  37474741 tgttttcatataaactataaattgtttttctaagctatcatagagaacttatgataataagc 37474802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 531 - 604
Target Start/End: Complemental strand, 39659607 - 39659534
Alignment:
Q  531 aataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataag 604  Q
    ||||| ||| ||||||||| || || | ||| | ||||||| ||||||||| |||||||||||||||| |||||    
T  39659607 aataacgttaaattgtttttgtctatgttataacttgtttttataagctatattagagaacttatgaagataag 39659534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 529 - 570
Target Start/End: Complemental strand, 43199893 - 43199852
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttt 570  Q
    ||||||||||| ||||||||| ||||||||||| ||||||||    
T  43199893 aaaataaagttaaattgtttttgtataagctataagttgttt 43199852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 5e-21; HSPs: 58)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 496 - 611
Target Start/End: Original strand, 10114428 - 10114541
Alignment:
Q  496 cttatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttat 595  Q
    |||||||||||||||||||||| | |||| ||||||   ||||| ||||||||| ||||||||||| || ||||||||| |||||| || |||||| |||    
T  10114428 cttatgtataagctatttctatagcaaaagataaaat--aagttgaattgttttggtataagctataagctgttttcattagctatattggagaacatat 10114525  T
Q  596 gaaaataagccgaaaa 611  Q
    |||||||||| |||||    
T  10114526 gaaaataagctgaaaa 10114541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 526 - 616
Target Start/End: Original strand, 8062491 - 8062581
Alignment:
Q  526 ataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaatagct 616  Q
    ||||||| |||||  |||||||||| |||||||||| || |||| |||||||||||||||||||  |||||||||||||| | ||||||||    
T  8062491 ataaaaaaaaagtcaaattgttttcatataagctataagatgttctcataagctatcttagagagtttatgaaaataagctggaaatagct 8062581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 535 - 616
Target Start/End: Original strand, 27028807 - 27028888
Alignment:
Q  535 aagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaatagct 616  Q
    ||||| ||||||||  ||||| ||||| || ||||||||||||||||||| |||| ||||||||||||||| ||||||||||    
T  27028807 aagttaaattgtttgtgtatatgctataagctgttttcataagctatcttggagagcttatgaaaataagctgaaaatagct 27028888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 496 - 611
Target Start/End: Complemental strand, 9956944 - 9956832
Alignment:
Q  496 cttatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttat 595  Q
    ||||||| | ||||||||||||   |||| |||||| |||||||| |||  |||| |||||| ||| |||||||||||||| ||||||| ||||||||||    
T  9956944 cttatgtttgagctatttctataacaaaagataaaa-taaagttttatt--tttcctataagttataagttgttttcataatctatcttggagaacttat 9956848  T
Q  596 gaaaataagccgaaaa 611  Q
    |||||||||| |||||    
T  9956847 gaaaataagctgaaaa 9956832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 500 - 611
Target Start/End: Complemental strand, 3537159 - 3537047
Alignment:
Q  500 tgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttc--ataagctatcttagagaacttatga 597  Q
    ||||||||| |||||||| | |||| |||||| ||||||  |||||||||||||||||||||  |||||| ||  ||||| |||||| |||||||||||     
T  3537159 tgtataagcaatttctatagcaaaagataaaa-taaagtcaaattgttttcgtataagctataggttgttatcatataagatatcttggagaacttatgg 3537061  T
Q  598 aaataagccgaaaa 611  Q
    |||||||| |||||    
T  3537060 aaataagctgaaaa 3537047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 497 - 603
Target Start/End: Original strand, 4558737 - 4558842
Alignment:
Q  497 ttatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatg 596  Q
    |||||||||||||||||||||   |||| |||||| ||||||| |||| ||||| |||| ||||| || ||||| ||||||||||| |||||| ||||||    
T  4558737 ttatgtataagctatttctataataaaagataaaa-taaagttaaattattttcatatatgctataagctgtttccataagctatcctagagagcttatg 4558835  T
Q  597 aaaataa 603  Q
     ||||||    
T  4558836 gaaataa 4558842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 496 - 605
Target Start/End: Original strand, 27754341 - 27754450
Alignment:
Q  496 cttatgtataagctatttctatggaaaaatataaaaataaagttt-aattgttttcgtataagctattagttgttttcataagctatcttagagaactta 594  Q
    ||||||||||| |||||||||| | ||||||||||| |||||||| |||| ||||| | | | |||| ||| ||||||||||||||| || |||| ||||    
T  27754341 cttatgtataaactatttctattgcaaaatataaaa-taaagtttcaattattttcatgttaactataagtggttttcataagctattttggagagctta 27754439  T
Q  595 tgaaaataagc 605  Q
    |||||||||||    
T  27754440 tgaaaataagc 27754450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 499 - 616
Target Start/End: Complemental strand, 16211015 - 16210899
Alignment:
Q  499 atgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaa 598  Q
    ||||||||||||||||||| | |||  |||||| |||||||  ||||||||| |||||||||| ||||||||||| || ||||||    ||||||| |||    
T  16211015 atgtataagctatttctatagtaaatgataaaa-taaagttacattgttttcatataagctataagttgttttcaaaacctatctagtggaacttacgaa 16210917  T
Q  599 aataagccgaaaatagct 616  Q
    ||||||| ||||| ||||    
T  16210916 aataagctgaaaacagct 16210899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 529 - 616
Target Start/End: Original strand, 21653051 - 21653138
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaatagct 616  Q
    ||||||||||| ||||| |||||| || ||||  | ||| |||||| ||||||||| |||| ||||||||||||||| ||||||||||    
T  21653051 aaaataaagttaaattgatttcgtgtaggctacaaattgctttcattagctatcttggagagcttatgaaaataagctgaaaatagct 21653138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 549 - 616
Target Start/End: Original strand, 31862483 - 31862550
Alignment:
Q  549 tcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaatagct 616  Q
    ||||||||||||| || |||||||||||| |||| |||||| ||||||||||||||| ||||| ||||    
T  31862483 tcgtataagctataagatgttttcataagttatcctagagagcttatgaaaataagctgaaaacagct 31862550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 541 - 616
Target Start/End: Original strand, 43504733 - 43504808
Alignment:
Q  541 aattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaatagct 616  Q
    ||||||||| ||| ||||||| || |||||| |||||||||||| ||||||||||| |||||||| ||||| ||||    
T  43504733 aattgttttagtagaagctataagatgtttttataagctatcttggagaacttatggaaataagctgaaaacagct 43504808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 529 - 611
Target Start/End: Complemental strand, 2595097 - 2595015
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    ||||||||||| |||||||||||||  ||| || |||||||||||||||||   ||||| ||||||||| ||||||| |||||    
T  2595097 aaaataaagttaaattgttttcgtactagccataagttgttttcataagctgcattagacaacttatgagaataagctgaaaa 2595015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 529 - 611
Target Start/End: Complemental strand, 7918873 - 7918791
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    ||||||||||| |||| ||||| | |||||||| ||||||||||||||||||||||  ||| ||| || |||||||| |||||    
T  7918873 aaaataaagttaaatttttttcttgtaagctataagttgttttcataagctatcttgtagagcttgtggaaataagctgaaaa 7918791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 535 - 589
Target Start/End: Original strand, 24558829 - 24558883
Alignment:
Q  535 aagtttaattgttttcgtataagctattagttgttttcataagctatcttagaga 589  Q
    ||||| |||| |||||||||||||||| |||||||||||||||||||||| ||||    
T  24558829 aagttaaattattttcgtataagctataagttgttttcataagctatcttggaga 24558883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 507 - 605
Target Start/End: Complemental strand, 42043466 - 42043369
Alignment:
Q  507 gctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagc 605  Q
    ||||||||||| | |||| |||||| |  |||| ||||||||| | ||| | ||| |||||||||||||||||||||||||||||| |||| |||||||    
T  42043466 gctatttctatagcaaaagataaaa-tgcagttaaattgtttttggatatgatataagttgttttcataagctatcttagagaactaatgacaataagc 42043369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 496 - 581
Target Start/End: Original strand, 7514516 - 7514600
Alignment:
Q  496 cttatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctat 581  Q
    |||||||||||||||||||||| | ||||  ||||| ||| ||| |||||||||| |||||||||  || ||||||||||||||||    
T  7514516 cttatgtataagctatttctatagcaaaaactaaaa-taatgttcaattgttttcatataagctacaagctgttttcataagctat 7514600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 503 - 616
Target Start/End: Original strand, 12976158 - 12976269
Alignment:
Q  503 ataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaata 602  Q
    ||||||||||||||| | ||||||||||| ||||||| ||||  |||  |||| ||||  | ||||||| ||||||||| |||||||||||||| |||||    
T  12976158 ataagctatttctatagcaaaatataaaa-taaagttaaattaattttttatatgctacaatttgtttttataagctatattagagaacttatg-aaata 12976255  T
Q  603 agccgaaaatagct 616  Q
    ||| ||||| ||||    
T  12976256 agctgaaaaaagct 12976269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 503 - 604
Target Start/End: Original strand, 26771210 - 26771310
Alignment:
Q  503 ataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaata 602  Q
    ||||||||||||||| | |||  |||||| |||| || ||||||||| ||||| ||||| || | |||| ||||| ||| ||||||||||||||||||||    
T  26771210 ataagctatttctatagtaaagcataaaa-taaacttaaattgtttttgtatatgctataagctttttttataagatatattagagaacttatgaaaata 26771308  T
Q  603 ag 604  Q
    ||    
T  26771309 ag 26771310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 530 - 603
Target Start/End: Complemental strand, 37353348 - 37353275
Alignment:
Q  530 aaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataa 603  Q
    |||||||||| ||||||||| || || ||||| || ||||||| ||||||||||| |||| |||||||||||||    
T  37353348 aaataaagttaaattgtttttgtgtatgctataagctgttttcttaagctatctttgagagcttatgaaaataa 37353275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 563 - 616
Target Start/End: Original strand, 38307666 - 38307719
Alignment:
Q  563 agttgttttcataagctatcttagagaacttatgaaaataagccgaaaatagct 616  Q
    ||||||||||| |||||||||| ||||| ||||||||||||||||||| |||||    
T  38307666 agttgttttcacaagctatcttggagaaattatgaaaataagccgaaagtagct 38307719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 551 - 611
Target Start/End: Original strand, 8062321 - 8062381
Alignment:
Q  551 gtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    ||||||||||| || ||||||||||||||||||||||||  ||||| |||||||| |||||    
T  8062321 gtataagctataagctgttttcataagctatcttagagagattatggaaataagctgaaaa 8062381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 498 - 582
Target Start/End: Original strand, 31884534 - 31884617
Alignment:
Q  498 tatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatc 582  Q
    |||||||||| |||||||||   |||||||||||  ||| || |||||||||| |||||||||| | ||||||||||||||||||    
T  31884534 tatgtataagttatttctataacaaaatataaaatcaaa-ttgaattgttttcatataagctataaattgttttcataagctatc 31884617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 529 - 589
Target Start/End: Original strand, 34770862 - 34770922
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagaga 589  Q
    ||||||||||  |||||||||| | |||||||| |||||||||||||||||||| ||||||    
T  34770862 aaaataaagtcaaattgttttcatttaagctataagttgttttcataagctatcctagaga 34770922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 529 - 616
Target Start/End: Complemental strand, 35534711 - 35534626
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaatagct 616  Q
    ||||||||||| ||||||||| ||||  | |||  |||||||||||||| ||| || |||||||||||||| ||||||||||| ||||    
T  35534711 aaaataaagttaaattgtttttgtat--gttatatgttgttttcataagttatattggagaacttatgaaagtaagccgaaaaaagct 35534626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 541 - 584
Target Start/End: Complemental strand, 9834877 - 9834834
Alignment:
Q  541 aattgttttcgtataagctattagttgttttcataagctatctt 584  Q
    |||||||||| |||||||||| ||||||||||||||||||||||    
T  9834877 aattgttttcatataagctataagttgttttcataagctatctt 9834834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 529 - 616
Target Start/End: Complemental strand, 10758356 - 10758270
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaatagct 616  Q
    ||||||||||| ||||||||| ||||| ||||| |||||| || ||||||||| ||||  |||||||||||| |||| ||||| ||||    
T  10758356 aaaataaagttaaattgtttttgtatatgctataagttgtctttataagctatattag-caacttatgaaaacaagctgaaaaaagct 10758270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 552 - 611
Target Start/End: Original strand, 30389092 - 30389151
Alignment:
Q  552 tataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    ||||||||||  | |||||||||||||| || |||||||||||||||||||||| |||||    
T  30389092 tataagctatacgctgttttcataagctttcctagagaacttatgaaaataagctgaaaa 30389151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 541 - 616
Target Start/End: Original strand, 38874628 - 38874703
Alignment:
Q  541 aattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaatagct 616  Q
    |||| ||||| |||||||| | || |||||||||||||||| || |||||| |||||||||||||  |||||||||    
T  38874628 aattcttttcatataagctctaagctgttttcataagctattttggagaacatatgaaaataagctaaaaatagct 38874703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 529 - 611
Target Start/End: Original strand, 11376673 - 11376755
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    |||||||||| ||||| ||||  |||||||||| || || |||| |||||||| ||||||||  ||||||||||||| |||||    
T  11376673 aaaataaagtctaattattttgatataagctataagatgctttcttaagctattttagagaatctatgaaaataagctgaaaa 11376755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 530 - 604
Target Start/End: Original strand, 27049338 - 27049411
Alignment:
Q  530 aaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataag 604  Q
    |||||||||| |||| |||||||||||||||| |  | |||||||||||||| || ||||| |||||||||||||    
T  27049338 aaataaagttcaattattttcgtataagctataaacttttttcataagctat-ttggagaaattatgaaaataag 27049411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 500 - 602
Target Start/End: Complemental strand, 30628030 - 30627929
Alignment:
Q  500 tgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaa 599  Q
    |||||||||||||||| |   |||| |||||| |||| |  ||||||||  || |||||||| ||||||||||||||| ||||||||||| |||||| ||    
T  30628030 tgtataagctatttctgtaacaaaagataaaa-taaaataaaattgtttatgtgtaagctataagttgttttcataagttatcttagagagcttatggaa 30627932  T
Q  600 ata 602  Q
    |||    
T  30627931 ata 30627929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 529 - 599
Target Start/End: Complemental strand, 31804554 - 31804484
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaa 599  Q
    ||||||||||| |||||||||| |||||| ||| ||  |||||||| ||||||||| |||| |||||||||    
T  31804554 aaaataaagttaaattgttttcctataagttataagcagttttcatgagctatctttgagagcttatgaaa 31804484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 496 - 578
Target Start/End: Original strand, 42597339 - 42597420
Alignment:
Q  496 cttatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagc 578  Q
    ||||||||||||||||||||||   |||| |||||| ||||||  |||||||||| |  ||||||| ||||||||||||||||    
T  42597339 cttatgtataagctatttctataacaaaagataaaa-taaagtaaaattgttttcatgcaagctataagttgttttcataagc 42597420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 529 - 602
Target Start/End: Complemental strand, 900796 - 900725
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaata 602  Q
    ||||||||||| |||  |||| ||||||||||| |||||||||||||||||| |||| | ||||||||||||||    
T  900796 aaaataaagtt-aatattttttgtataagctataagttgttttcataagctaactta-acaacttatgaaaata 900725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 496 - 605
Target Start/End: Original strand, 3936787 - 3936895
Alignment:
Q  496 cttatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttat 595  Q
    ||||||||||| ||||||||||   |||  || ||||||||| | |||||| ||| |||||||||| || ||||||| ||||||| |||  || ||||||    
T  3936787 cttatgtataatctatttctataacaaaggat-aaaataaagctaaattgtcttcctataagctataagctgttttcgtaagctaacttgaagcacttat 3936885  T
Q  596 gaaaataagc 605  Q
    ||||||||||    
T  3936886 gaaaataagc 3936895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 563 - 604
Target Start/End: Complemental strand, 26473818 - 26473777
Alignment:
Q  563 agttgttttcataagctatcttagagaacttatgaaaataag 604  Q
    |||||||||||||||||||| |||||| ||||||||||||||    
T  26473818 agttgttttcataagctatcctagagagcttatgaaaataag 26473777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 529 - 611
Target Start/End: Complemental strand, 36338364 - 36338280
Alignment:
Q  529 aaaataaagtttaattgttttc--gtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    ||||| ||||| ||||||||||  ||||||| ||| || |||||| ||||  |||||| |||||||||||||||||||| |||||    
T  36338364 aaaatgaagttgaattgttttcttgtataagatataagctgtttttataaaatatctttgagaacttatgaaaataagctgaaaa 36338280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 530 - 599
Target Start/End: Original strand, 38648322 - 38648391
Alignment:
Q  530 aaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaa 599  Q
    ||||||| || | ||||||| ||||| | ||| ||||||||||||||||||||||  |||||||||||||    
T  38648322 aaataaaattaacttgtttttgtatatgttatgagttgttttcataagctatcttgtagaacttatgaaa 38648391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 546 - 602
Target Start/End: Original strand, 11861791 - 11861847
Alignment:
Q  546 ttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaata 602  Q
    |||| ||||| ||||| ||||||||| |||||||||  |||||||||||||||||||    
T  11861791 tttttgtatatgctataagttgtttttataagctataatagagaacttatgaaaata 11861847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 543 - 611
Target Start/End: Original strand, 12851160 - 12851228
Alignment:
Q  543 ttgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    ||||| |||| |||||||  | ||||||||||||||| || | |||| |||||||||||||||||||||    
T  12851160 ttgttgtcgtgtaagctagaaattgttttcataagctttccttgagagcttatgaaaataagccgaaaa 12851228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 497 - 616
Target Start/End: Original strand, 7646145 - 7646263
Alignment:
Q  497 ttatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatg 596  Q
    |||||||||||||||||||||   ||||  | ||||||||||| ||||||||| |||||| |||| |  ||| ||||||||||  |   |||| ||||||    
T  7646145 ttatgtataagctatttctataagaaaaggt-aaaataaagttaaattgtttttgtataatctataaactgtcttcataagctgaccaggagagcttatg 7646243  T
Q  597 aaaataagccgaaaatagct 616  Q
     |||||||| ||||||||||    
T  7646244 gaaataagctgaaaatagct 7646263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 536 - 611
Target Start/End: Original strand, 10120733 - 10120808
Alignment:
Q  536 agtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    |||| ||||||||| |||||| |||| || ||||| ||| | |||| || |||||||||||||||||||| |||||    
T  10120733 agttaaattgttttggtataacctataagctgtttacattaactatattggagaacttatgaaaataagctgaaaa 10120808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 553 - 616
Target Start/End: Complemental strand, 14247300 - 14247237
Alignment:
Q  553 ataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaatagct 616  Q
    |||| |||| || ||||||| |||| |||| |||||||||||||||||||||| ||||| ||||    
T  14247300 ataaactataagctgttttcgtaagatatcgtagagaacttatgaaaataagctgaaaacagct 14247237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 496 - 611
Target Start/End: Complemental strand, 28769471 - 28769357
Alignment:
Q  496 cttatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttat 595  Q
    ||||||||||||||||| ||||   ||| ||||||| ||| ||  || | ||||| |||||||||| || |||||||||||||||| || ||||  ||||    
T  28769471 cttatgtataagctattcctataacaaactataaaattaa-gtcaaactattttcttataagctataagctgttttcataagctattttggagagtttat 28769373  T
Q  596 gaaaataagccgaaaa 611  Q
    | |||||||| |||||    
T  28769372 ggaaataagctgaaaa 28769357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 563 - 602
Target Start/End: Complemental strand, 35749636 - 35749597
Alignment:
Q  563 agttgttttcataagctatcttagagaacttatgaaaata 602  Q
    |||||||| |||||||||||||| ||||||||||||||||    
T  35749636 agttgtttccataagctatcttaaagaacttatgaaaata 35749597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 566 - 613
Target Start/End: Complemental strand, 44236886 - 44236839
Alignment:
Q  566 tgttttcataagctatcttagagaacttatgaaaataagccgaaaata 613  Q
    |||||||||||||||| || |||| ||||||||||||||| |||||||    
T  44236886 tgttttcataagctatattggagagcttatgaaaataagctgaaaata 44236839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 467 - 531
Target Start/End: Original strand, 1929963 - 1930024
Alignment:
Q  467 cttacttgcagcttatagcataagtgcttcttatgtataagctatttctatggaaaaatataaaa 531  Q
    |||||||||||||||||||| ||| ||||   ||||||||| ||||||||| |||||| ||||||    
T  1929963 cttacttgcagcttatagcacaagcgctt---atgtataagttatttctatagaaaaagataaaa 1930024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 544 - 618
Target Start/End: Original strand, 7714227 - 7714301
Alignment:
Q  544 tgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaatagctca 618  Q
    ||||||| ||| | |||| |||||||||||| ||||||||| |||| || |||||||||||  ||||| ||||||    
T  7714227 tgttttcatatcaactataagttgttttcatgagctatcttggagagctcatgaaaataagttgaaaacagctca 7714301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 530 - 616
Target Start/End: Complemental strand, 25930653 - 25930567
Alignment:
Q  530 aaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaatagct 616  Q
    ||||||| || || |||||| ||||| ||| | | |||||||||||||||||||| |||||||| ||| | ||||| ||||| ||||    
T  25930653 aaataaaattaaaatgtttttgtatatgctttaaattgttttcataagctatcttggagaacttgtgatagtaagctgaaaaaagct 25930567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 498 - 588
Target Start/End: Complemental strand, 27728151 - 27728062
Alignment:
Q  498 tatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagag 588  Q
    |||||| | |||||||||||  ||||| |||||| ||||||  || | ||||| |||||  |||||||||||||||||||||||| |||||    
T  27728151 tatgtacaggctatttctataaaaaaagataaaa-taaagtcaaactattttcatataaagtattagttgttttcataagctatcctagag 27728062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 552 - 614
Target Start/End: Original strand, 30013211 - 30013273
Alignment:
Q  552 tataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaatag 614  Q
    |||||||||| || ||||||||||||||||| |  |||||| ||| |||||||| ||||||||    
T  30013211 tataagctataagctgttttcataagctatcctgtagaactaatggaaataagctgaaaatag 30013273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 546 - 596
Target Start/End: Complemental strand, 32841391 - 32841341
Alignment:
Q  546 ttttcgtataagctattagttgttttcataagctatcttagagaacttatg 596  Q
    |||| ||||||||||| || ||||||||||||||||||| ||||| |||||    
T  32841391 tttttgtataagctataagctgttttcataagctatcttggagaagttatg 32841341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 529 - 611
Target Start/End: Complemental strand, 42215181 - 42215100
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    ||||||||||  |||||||||||||| | |||| | |  ||||||||||||||||| |||| |||||| |||||||| |||||    
T  42215181 aaaataaagtcaaattgttttcgtatcatctataaata-ttttcataagctatcttggagagcttatgtaaataagctgaaaa 42215100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 529 - 599
Target Start/End: Complemental strand, 42237522 - 42237452
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaa 599  Q
    ||||||||||| |||||||||| |||||||||| |   ||||||| |||||||||| ||||  ||||||||    
T  42237522 aaaataaagttaaattgttttcatataagctataataagttttcacaagctatcttcgagagtttatgaaa 42237452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 529 - 614
Target Start/End: Complemental strand, 6509403 - 6509318
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaatag 614  Q
    ||||||||||  |||||| ||  |||||||||| || ||||||||||||||||| | |||| |||||  |||||||  ||||||||    
T  6509403 aaaataaagtcaaattgtatttatataagctataagctgttttcataagctatcctggagagcttattgaaataaggtgaaaatag 6509318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 555 - 616
Target Start/End: Original strand, 6966881 - 6966942
Alignment:
Q  555 aagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaatagct 616  Q
    ||||||| || ||||||||| ||| ||||| | || ||||||||||||||| ||||||||||    
T  6966881 aagctataagctgttttcattagccatcttggggagcttatgaaaataagcggaaaatagct 6966942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 568 - 605
Target Start/End: Complemental strand, 10075612 - 10075575
Alignment:
Q  568 ttttcataagctatcttagagaacttatgaaaataagc 605  Q
    ||||||||||||||| |||||| |||||||||||||||    
T  10075612 ttttcataagctatcctagagagcttatgaaaataagc 10075575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 496 - 561
Target Start/End: Complemental strand, 14280533 - 14280469
Alignment:
Q  496 cttatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctat 561  Q
    ||||||||||| |||||||||| | |||| |||||| |||| || |||||||||| ||||||||||    
T  14280533 cttatgtataacctatttctatagcaaaagataaaattaaa-ttaaattgttttcatataagctat 14280469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 5e-21; HSPs: 69)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 495 - 611
Target Start/End: Complemental strand, 20881769 - 20881654
Alignment:
Q  495 tcttatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaactta 594  Q
    |||||||||| |||||| ||||| | |||| ||||||  || ||| |||||||| |||| ||||||| |||||||||||||| |||||||| ||||||||    
T  20881769 tcttatgtatgagctatatctatagcaaaagataaaacgaa-gttaaattgtttccgtacaagctataagttgttttcataaactatcttaaagaactta 20881671  T
Q  595 tgaaaataagccgaaaa 611  Q
    ||||||||||| |||||    
T  20881670 tgaaaataagctgaaaa 20881654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 529 - 616
Target Start/End: Original strand, 39907773 - 39907860
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaatagct 616  Q
    ||||||| ||| ||||||||| ||||||||||| |  ||||||||||| ||||||||||||||| |||||||||||| ||||| ||||    
T  39907773 aaaataaggttaaattgtttttgtataagctataaactgttttcataaactatcttagagaactaatgaaaataagctgaaaacagct 39907860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 529 - 604
Target Start/End: Original strand, 39967890 - 39967965
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataag 604  Q
    |||||||| || |||||||||||||  |||||| ||||||||||||||||||||| |||||||| |||||||||||    
T  39967890 aaaataaacttaaattgttttcgtactagctataagttgttttcataagctatctgagagaactaatgaaaataag 39967965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 529 - 603
Target Start/End: Original strand, 12110330 - 12110404
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataa 603  Q
    ||||||||||  ||||||||| ||||||||||| || |||||||||||||||||||  |||||||||||||||||    
T  12110330 aaaataaagtcaaattgttttggtataagctataagctgttttcataagctatcttgaagaacttatgaaaataa 12110404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 500 - 605
Target Start/End: Original strand, 47177578 - 47177682
Alignment:
Q  500 tgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaa 599  Q
    |||||||| |||||||||   |||||| ||||  |||||| |||||||||| |||||||||| || |||||||| |||||||||| ||||| ||||||||    
T  47177578 tgtataaggtatttctatatcaaaatacaaaac-aaagttaaattgttttcatataagctataagctgttttcaaaagctatcttggagaatttatgaaa 47177676  T
Q  600 ataagc 605  Q
    ||||||    
T  47177677 ataagc 47177682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 497 - 616
Target Start/End: Original strand, 34743968 - 34744085
Alignment:
Q  497 ttatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatg 596  Q
    |||||||||||| ||||| || | |||| || ||| ||||  ||||||||||| ||||| | ||| ||||||||||||||||||| || ||||||||||     
T  34743968 ttatgtataagccatttccataggaaaagatgaaattaaa--ttaattgtttttgtatatggtataagttgttttcataagctatattggagaacttata 34744065  T
Q  597 aaaataagccgaaaatagct 616  Q
    |||||||| |||||| ||||    
T  34744066 aaaataaggcgaaaaaagct 34744085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 529 - 616
Target Start/End: Complemental strand, 22283844 - 22283757
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaatagct 616  Q
    ||||||||||| ||||||||| |||| |||||| |  ||||||||||| | ||||||||||||||||| |||||||| ||||| ||||    
T  22283844 aaaataaagttaaattgtttttgtatcagctataaactgttttcataaaccatcttagagaacttatggaaataagctgaaaacagct 22283757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 496 - 604
Target Start/End: Original strand, 17248491 - 17248598
Alignment:
Q  496 cttatgtataagctatttctatggaaaaatat-aaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaactta 594  Q
    ||||||| |||||||||||||    |||| || ||||| |||||| ||||||||| ||||||||||| || | ||||||||||  |||||||||||||||    
T  17248491 cttatgtgtaagctatttctagatcaaaagataaaaaaaaaagttaaattgtttttgtataagctataagctcttttcataag--atcttagagaactta 17248588  T
Q  595 tgaaaataag 604  Q
    ||||||||||    
T  17248589 tgaaaataag 17248598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 507 - 605
Target Start/End: Complemental strand, 40689107 - 40689010
Alignment:
Q  507 gctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagc 605  Q
    ||||||||||| | |||| |||||| ||||||| |||| ||||| |||||||||| || ||| ||||||||||||| | || |||||||||||||||||    
T  40689107 gctatttctatagcaaaagataaaa-taaagttaaattattttcatataagctataagctgtgttcataagctatcctggataacttatgaaaataagc 40689010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 496 - 605
Target Start/End: Original strand, 27548201 - 27548309
Alignment:
Q  496 cttatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttat 595  Q
    ||||| |||||||||||||  | | |||| |||||| |||||| ||||||||||| | |||||||| || ||||||||||||||||||| || |||||||    
T  27548201 cttatctataagctatttccttagcaaaagataaaa-taaagtctaattgttttcatttaagctataagctgttttcataagctatcttggataacttat 27548299  T
Q  596 gaaaataagc 605  Q
    | | ||||||    
T  27548300 ggagataagc 27548309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 565 - 605
Target Start/End: Complemental strand, 33552914 - 33552874
Alignment:
Q  565 ttgttttcataagctatcttagagaacttatgaaaataagc 605  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  33552914 ttgttttcataagctatcttagagaacttatgaaaataagc 33552874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 541 - 605
Target Start/End: Original strand, 38010696 - 38010760
Alignment:
Q  541 aattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagc 605  Q
    |||||||||| |||||||||| || ||||||||||| ||||| ||||||||||||| ||||||||    
T  38010696 aattgttttcatataagctataagctgttttcataatctatcctagagaacttatggaaataagc 38010760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 504 - 611
Target Start/End: Original strand, 48507667 - 48507775
Alignment:
Q  504 taagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctat-cttagagaacttatgaaaata 602  Q
    |||||| ||||||| | |||| |||| ||| ||||| ||||||||| ||||| ||||| |  ||||||||||||| || |||||||||||||||||| ||    
T  48507667 taagctgtttctatagcaaaagataagaatgaagttaaattgtttttgtatatgctataaactgttttcataagccatccttagagaacttatgaaatta 48507766  T
Q  603 agccgaaaa 611  Q
    ||| |||||    
T  48507767 agctgaaaa 48507775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 529 - 604
Target Start/End: Original strand, 420330 - 420405
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataag 604  Q
    ||||||| ||| ||||||||| ||||| ||||| |||||||| | |||||||| || |||||||||||||||||||    
T  420330 aaaataatgttcaattgtttttgtatatgctataagttgtttccgtaagctatattggagaacttatgaaaataag 420405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 472 - 611
Target Start/End: Complemental strand, 28613690 - 28613552
Alignment:
Q  472 ttgcagcttatagcataagtgcttcttatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgtttt 571  Q
    ||||||||||||| ||||  |||| ||||||||||||||||| |||   |||| || |||| |||||| ||||||||| ||||||| ||| ||||||| |    
T  28613690 ttgcagcttataggataaacgcttattatgtataagctatttttataacaaaagat-aaaacaaagttaaattgtttttgtataagttataagttgttgt 28613592  T
Q  572 cataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    | |||||||| |||  ||  ||| |||||||||| |||||    
T  28613591 cgtaagctattttaaggaggttaagaaaataagctgaaaa 28613552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 529 - 616
Target Start/End: Complemental strand, 33601509 - 33601423
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaatagct 616  Q
    ||||||||||| |||| |||| ||||  ||||| ||||||||| ||||||||||||||||||||||||||  ||||| ||||| ||||    
T  33601509 aaaataaagttaaattatttttgtatttgctataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagct 33601423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 529 - 603
Target Start/End: Complemental strand, 30456550 - 30456476
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataa 603  Q
    ||||||||||  |||||||||| |||||| ||| ||| |||||||||| ||||||| |||| |||||||||||||    
T  30456550 aaaataaagtcaaattgttttcatataagttataagtggttttcataaactatcttggagagcttatgaaaataa 30456476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 472 - 616
Target Start/End: Original strand, 30535480 - 30535620
Alignment:
Q  472 ttgcagcttatagcataagtgcttcttatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgtttt 571  Q
    |||||||||||||||||||  |||   | ||||||| || ||||||   |||| |||||| |||| || || ||||||||||||| |||| || |||||     
T  30535480 ttgcagcttatagcataagcactt---acgtataagttacttctataacaaaagataaaattaaa-ttgaagtgttttcgtataatctataagctgtttc 30535575  T
Q  572 cataagctatcttagagaacttatgaaaataagccgaaaatagct 616  Q
    |||||||||||||| ||||| ||||||||||| | ||||| ||||    
T  30535576 cataagctatcttatagaacatatgaaaataacctgaaaacagct 30535620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 530 - 604
Target Start/End: Original strand, 44821930 - 44822004
Alignment:
Q  530 aaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataag 604  Q
    |||||||||  ||||||||| ||||||| ||| || ||||||||||||||||  | |||||||||||||||||||    
T  44821930 aaataaagtcaaattgtttttgtataagttataagctgttttcataagctattctggagaacttatgaaaataag 44822004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 529 - 603
Target Start/End: Complemental strand, 47046208 - 47046134
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataa 603  Q
    ||||||||||  |||||||||| ||||||||   |||||||||||||||||||| ||||||| |||| |||||||    
T  47046208 aaaataaagtcaaattgttttcatataagctccgagttgttttcataagctatcctagagaaattataaaaataa 47046134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 552 - 613
Target Start/End: Complemental strand, 2825308 - 2825247
Alignment:
Q  552 tataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaata 613  Q
    ||||| |||| ||||||||||| |||||||| ||||||||||||| |||||||| |||||||    
T  2825308 tataaactataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaata 2825247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 502 - 611
Target Start/End: Complemental strand, 45790551 - 45790443
Alignment:
Q  502 tataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaat 601  Q
    |||||| ||||||||||| |||| |||||  ||||||| | ||||||   |||||||||| ||||||||| |||| |||| || || |||||||||||||    
T  45790551 tataagttatttctatgggaaaagataaac-taaagttaatttgtttatttataagctataagttgtttttataaactatattggataacttatgaaaat 45790453  T
Q  602 aagccgaaaa 611  Q
    |||| |||||    
T  45790452 aagctgaaaa 45790443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 541 - 605
Target Start/End: Original strand, 30812130 - 30812194
Alignment:
Q  541 aattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagc 605  Q
    ||||||||||||||||||||| || ||||||||| ||||||| | |||| |||||| ||||||||    
T  30812130 aattgttttcgtataagctataagctgttttcattagctatcatggagagcttatggaaataagc 30812194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 532 - 616
Target Start/End: Complemental strand, 46280369 - 46280285
Alignment:
Q  532 ataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaatagct 616  Q
    ||||| || ||||||||| ||||| ||||| || |||||| ||||||||| || ||||||||||||||||| || ||||| ||||    
T  46280369 ataaatttaaattgtttttgtatatgctataagctgtttttataagctatattggagaacttatgaaaataggctgaaaaaagct 46280285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 541 - 604
Target Start/End: Complemental strand, 5569724 - 5569661
Alignment:
Q  541 aattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataag 604  Q
    ||||||||| ||||||| ||| ||||||||||||||| ||||||  |||||| |||||||||||    
T  5569724 aattgttttggtataagttataagttgttttcataagttatcttgaagaactaatgaaaataag 5569661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 497 - 576
Target Start/End: Original strand, 30496643 - 30496721
Alignment:
Q  497 ttatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataa 576  Q
    |||||||||| ||||||||||   ||||||||||| ||||||  |||||||||||||||| ||||  |||||||||||||    
T  30496643 ttatgtataaactatttctataacaaaatataaaa-taaagtcaaattgttttcgtataacctataggttgttttcataa 30496721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 533 - 604
Target Start/End: Original strand, 33678754 - 33678825
Alignment:
Q  533 taaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataag 604  Q
    ||||||| ||| ||||| ||| ||||||| || ||||||||||||||||||| || ||||| ||||||||||    
T  33678754 taaagttaaatggtttttgtaaaagctataagctgttttcataagctatcttggaaaacttgtgaaaataag 33678825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 541 - 603
Target Start/End: Complemental strand, 4970881 - 4970819
Alignment:
Q  541 aattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataa 603  Q
    ||||||||| ||||| ||||| |||| |||| ||||| ||| |||||||||||||||||||||    
T  4970881 aattgtttttgtatatgctataagttctttttataagatatattagagaacttatgaaaataa 4970819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 563 - 605
Target Start/End: Complemental strand, 48917412 - 48917370
Alignment:
Q  563 agttgttttcataagctatcttagagaacttatgaaaataagc 605  Q
    |||||||||||||||||||||| |||| |||||||||||||||    
T  48917412 agttgttttcataagctatcttggagagcttatgaaaataagc 48917370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 530 - 611
Target Start/End: Complemental strand, 17944442 - 17944361
Alignment:
Q  530 aaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    |||||||||| ||||||||| ||||| | | | ||||||||||||||| |||||| || || |||||||| ||||| |||||    
T  17944442 aaataaagttaaattgtttttgtatatgttgtaagttgttttcataagttatcttggataatttatgaaattaagctgaaaa 17944361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 541 - 598
Target Start/End: Complemental strand, 18350795 - 18350738
Alignment:
Q  541 aattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaa 598  Q
    ||||||||||||||||| ||| || ||||||||||||||||| | |||| ||||||||    
T  18350795 aattgttttcgtataagttataagctgttttcataagctatcatggagagcttatgaa 18350738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 496 - 585
Target Start/End: Complemental strand, 36874097 - 36874009
Alignment:
Q  496 cttatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatctta 585  Q
    ||||||||||||||||||||||  | ||||   |||||||| || |||| ||||| |||||||||| |||||||||| ||||||| ||||    
T  36874097 cttatgtataagctatttctat-aagaaatgataaaataaatttgaattattttcttataagctataagttgttttcttaagctagctta 36874009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 530 - 611
Target Start/End: Complemental strand, 37064563 - 37064482
Alignment:
Q  530 aaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    ||||| |||| |||||||||   ||| ||||| || ||||||| |||||||| |||||| |||||||||||||||| |||||    
T  37064563 aaatacagttaaattgtttttacatatgctataagctgttttcgtaagctattttagaggacttatgaaaataagctgaaaa 37064482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 555 - 604
Target Start/End: Complemental strand, 40530483 - 40530434
Alignment:
Q  555 aagctattagttgttttcataagctatcttagagaacttatgaaaataag 604  Q
    ||||||| ||||||||| |||||||||| || ||||||||||||||||||    
T  40530483 aagctataagttgttttaataagctatcctaaagaacttatgaaaataag 40530434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 544 - 605
Target Start/End: Complemental strand, 46104387 - 46104326
Alignment:
Q  544 tgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagc 605  Q
    |||||||||||||||||| |  |||||||||||| ||||||  ||||||||||||| |||||    
T  46104387 tgttttcgtataagctataaactgttttcataagttatcttgaagaacttatgaaactaagc 46104326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 563 - 604
Target Start/End: Complemental strand, 47130851 - 47130810
Alignment:
Q  563 agttgttttcataagctatcttagagaacttatgaaaataag 604  Q
    |||||||||||||||||||||| |||||||| ||||||||||    
T  47130851 agttgttttcataagctatcttggagaacttgtgaaaataag 47130810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 503 - 603
Target Start/End: Original strand, 119855 - 119954
Alignment:
Q  503 ataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaata 602  Q
    ||||||||||||||  | |||| |||||| ||||||| ||||||||  ||| | ||||| ||||||||| ||||| ||  ||||||||||| ||||||||    
T  119855 ataagctatttctacaggaaaagataaaa-taaagttaaattgtttgtgtaaatgctataagttgtttttataagttacattagagaacttgtgaaaata 119953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 529 - 605
Target Start/End: Original strand, 20526416 - 20526492
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagc 605  Q
    ||||||||||| |||| | || ||| | ||||| || |||||||||||||||| || ||||||| ||||||||||||    
T  20526416 aaaataaagttaaattatgtttgtacatgctataagctgttttcataagctattttggagaactaatgaaaataagc 20526492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 551 - 611
Target Start/End: Complemental strand, 27863803 - 27863743
Alignment:
Q  551 gtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    ||||| ||||| ||||||||| |||| |||| |||||||||||||||| |||||| |||||    
T  27863803 gtatatgctataagttgttttaataaactatattagagaacttatgaacataagctgaaaa 27863743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 568 - 616
Target Start/End: Original strand, 36517588 - 36517636
Alignment:
Q  568 ttttcataagctatcttagagaacttatgaaaataagccgaaaatagct 616  Q
    ||||||||||||||||| ||||| |||||||||||| | ||||||||||    
T  36517588 ttttcataagctatcttggagaaattatgaaaataaactgaaaatagct 36517636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 500 - 616
Target Start/End: Complemental strand, 37832267 - 37832154
Alignment:
Q  500 tgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaa 599  Q
    ||||||| |||||||||| | ||||||| |||||||||||  ||||||||||| |||||||| || | |||||||| | |||||  ||||| |||||  |    
T  37832267 tgtataaactatttctatagcaaaatat-aaaataaagttagattgttttcgt-taagctataagcttttttcataggttatctgggagaatttatg-ga 37832171  T
Q  600 ataagccgaaaatagct 616  Q
    |||||| ||||||||||    
T  37832170 ataagctgaaaatagct 37832154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 541 - 605
Target Start/End: Complemental strand, 39393665 - 39393602
Alignment:
Q  541 aattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagc 605  Q
    |||| |||| |||| |||||| |||| |||||||||||||| || ||||||||||||||||||||    
T  39393665 aattatttttgtatgagctataagtttttttcataagctat-ttggagaacttatgaaaataagc 39393602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 529 - 605
Target Start/End: Complemental strand, 40252207 - 40252131
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagc 605  Q
    |||| |||||| ||| ||||| ||||| | ||| || | |||||||||| |||||| ||||||||||||||||||||    
T  40252207 aaaacaaagttaaatcgtttttgtatatgttataagctcttttcataagttatcttggagaacttatgaaaataagc 40252131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 544 - 604
Target Start/End: Original strand, 43648225 - 43648285
Alignment:
Q  544 tgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataag 604  Q
    |||||||||||| | ||| || ||||||||||||||||||| |||||  ||||||||||||    
T  43648225 tgttttcgtatatgatataagctgttttcataagctatcttggagaaaatatgaaaataag 43648285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 529 - 580
Target Start/End: Original strand, 1417234 - 1417285
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagcta 580  Q
    ||||||||||  |||||||||| ||||||| || ||||||||||||||||||    
T  1417234 aaaataaagtcaaattgttttcatataagcaataagttgttttcataagcta 1417285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 544 - 611
Target Start/End: Complemental strand, 3610825 - 3610758
Alignment:
Q  544 tgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    |||||| ||||||||||| |||||||||| ||| ||||| |||||| |||||  |||||||| |||||    
T  3610825 tgttttggtataagctataagttgttttcgtaaactatcctagagagcttatagaaataagctgaaaa 3610758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 529 - 616
Target Start/End: Original strand, 5947155 - 5947241
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaatagct 616  Q
    ||||||||||| || ||| || |||||| |||| || ||| ||||||||||||||  ||||| |||||||||||||| ||||| ||||    
T  5947155 aaaataaagttaaactgtatttgtataa-ctataagctgtattcataagctatctaggagaagttatgaaaataagctgaaaagagct 5947241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 529 - 604
Target Start/End: Complemental strand, 15309665 - 15309590
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataag 604  Q
    ||||||||||| ||||||||| ||||| | | | ||||||||||||||| ||| |  ||||| |||||||||||||    
T  15309665 aaaataaagttaaattgtttttgtatatgttttaagttgttttcataagttatttcggagaatttatgaaaataag 15309590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 557 - 604
Target Start/End: Complemental strand, 19022657 - 19022610
Alignment:
Q  557 gctattagttgttttcataagctatcttagagaacttatgaaaataag 604  Q
    ||||| ||||||||| ||||||||| || |||||||||||||||||||    
T  19022657 gctataagttgtttttataagctatattggagaacttatgaaaataag 19022610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 565 - 604
Target Start/End: Original strand, 34035923 - 34035962
Alignment:
Q  565 ttgttttcataagctatcttagagaacttatgaaaataag 604  Q
    |||||||||||||||||||||||||||||  |||||||||    
T  34035923 ttgttttcataagctatcttagagaacttgcgaaaataag 34035962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 528 - 603
Target Start/End: Complemental strand, 37064324 - 37064246
Alignment:
Q  528 aaaaataaagtttaattgttttcgtataagctatta-gttgttttcata--agctatcttagagaacttatgaaaataa 603  Q
    |||||||||||  |||||||||| ||||| || ||| ||||||||||||  ||||||| |||||| |||||||||||||    
T  37064324 aaaaataaagtcgaattgttttcatataaactcttaagttgttttcatataagctatcatagagagcttatgaaaataa 37064246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 553 - 604
Target Start/End: Complemental strand, 44179001 - 44178950
Alignment:
Q  553 ataagctattagttgttttcataagctatcttagagaacttatgaaaataag 604  Q
    ||||||||| | || ||||||||| ||||||||||||||||||| |||||||    
T  44179001 ataagctataatttattttcataatctatcttagagaacttatgcaaataag 44178950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 530 - 600
Target Start/End: Complemental strand, 7241431 - 7241361
Alignment:
Q  530 aaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaa 600  Q
    |||||||||| |||||| | | |||||||||| || | ||||| ||| ||||||| |||||||||||||||    
T  7241431 aaataaagttaaattgtgtacatataagctataagctattttcgtaaactatctttgagaacttatgaaaa 7241361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 570 - 616
Target Start/End: Complemental strand, 8690457 - 8690411
Alignment:
Q  570 ttcataagctatcttagagaacttatgaaaataagccgaaaatagct 616  Q
    |||||||| |||| ||||||||||||| ||||||||| |||||||||    
T  8690457 ttcataagttatcctagagaacttatggaaataagccaaaaatagct 8690411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 541 - 595
Target Start/End: Complemental strand, 28340932 - 28340878
Alignment:
Q  541 aattgttttcgtataagctattagttgttttcataagctatcttagagaacttat 595  Q
    ||||||| || |||||||||| || ||||||||||||||||| |||||| |||||    
T  28340932 aattgttgtcatataagctataagctgttttcataagctatcctagagagcttat 28340878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 529 - 571
Target Start/End: Original strand, 30180021 - 30180063
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgtttt 571  Q
    ||||||||||| ||||||||||||||||||||| || ||||||    
T  30180021 aaaataaagttaaattgttttcgtataagctataagctgtttt 30180063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 541 - 611
Target Start/End: Complemental strand, 33602114 - 33602045
Alignment:
Q  541 aattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    ||||||||| ||||  ||||| ||| ||||| ||||||||||||||||||||||||||  ||||| |||||    
T  33602114 aattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaa 33602045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 503 - 605
Target Start/End: Original strand, 48469989 - 48470090
Alignment:
Q  503 ataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaata 602  Q
    ||||||||||||||  | |||| |||||| ||| ||| ||||||||| |||||   ||| ||||||||||||||||||| ||  | |||||||||| |||    
T  48469989 ataagctatttctacagcaaaagataaaattaa-gttaaattgtttttgtatataatataagttgttttcataagctattttgaataacttatgaacata 48470087  T
Q  603 agc 605  Q
    |||    
T  48470088 agc 48470090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 494 - 576
Target Start/End: Complemental strand, 1432101 - 1432017
Alignment:
Q  494 ttcttatgtataagctatttctatggaaaaatataaaa--ataaagtttaattgttttcgtataagctattagttgttttcataa 576  Q
    |||||||||||||| |||||||||   |||| ||||||  | |||||| |||| ||||| |||||||||| || |||||||||||    
T  1432101 ttcttatgtataagttatttctataacaaaagataaaataaaaaagttaaattattttcatataagctatcagctgttttcataa 1432017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 529 - 610
Target Start/End: Complemental strand, 5628666 - 5628585
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaa 610  Q
    |||||| |||| || ||||||| | |||| ||| || |||||||||||| ||||  ||||| ||||||||||||||| ||||    
T  5628666 aaaatagagttgaactgttttcatttaagatataagctgttttcataagatatcacagagagcttatgaaaataagctgaaa 5628585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 566 - 611
Target Start/End: Original strand, 7244687 - 7244732
Alignment:
Q  566 tgttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    |||||||||||||||| || |||| ||||||||||||||| |||||    
T  7244687 tgttttcataagctatattggagagcttatgaaaataagctgaaaa 7244732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 566 - 611
Target Start/End: Original strand, 9050642 - 9050687
Alignment:
Q  566 tgttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    ||||||||||| ||||||| |||||||| ||||||||||| |||||    
T  9050642 tgttttcataaactatcttggagaacttgtgaaaataagctgaaaa 9050687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 541 - 610
Target Start/End: Original strand, 14768105 - 14768174
Alignment:
Q  541 aattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaa 610  Q
    |||| ||||| |||||| ||| || |||||| ||||| |||||| |||||||| ||||||||||| ||||    
T  14768105 aattattttcatataaggtataagctgtttttataagttatcttcgagaacttttgaaaataagctgaaa 14768174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 543 - 612
Target Start/End: Original strand, 21453278 - 21453347
Alignment:
Q  543 ttgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaat 612  Q
    ||||| || |||||||||| |  ||||||||||||||||| |||||| || ||||| |||||| ||||||    
T  21453278 ttgttctcatataagctataaactgttttcataagctatcctagagagctaatgaagataagctgaaaat 21453347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 530 - 603
Target Start/End: Complemental strand, 40377951 - 40377878
Alignment:
Q  530 aaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataa 603  Q
    |||||||||| |||| |||| ||||| | |   |||||||||||||| |||| || ||||||||||||||||||    
T  40377951 aaataaagttaaattctttttgtatatgttgcaagttgttttcataacctatattggagaacttatgaaaataa 40377878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 532 - 605
Target Start/End: Complemental strand, 43694667 - 43694594
Alignment:
Q  532 ataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagc 605  Q
    ||||| || ||||||||| ||||| ||||| || |||||| ||||||||| |   |||||||||||||||||||    
T  43694667 ataaatttaaattgtttttgtatatgctataagctgtttttataagctatatcgaagaacttatgaaaataagc 43694594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 530 - 611
Target Start/End: Original strand, 45264066 - 45264147
Alignment:
Q  530 aaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    |||||||||| ||||||||| ||||| ||||| || | |||| || |  ||| | |||||||||| ||||||||||||||||    
T  45264066 aaataaagttaaattgtttttgtatatgctataagctatttttatgatatatatcagagaacttaggaaaataagccgaaaa 45264147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 552 - 605
Target Start/End: Complemental strand, 46104644 - 46104591
Alignment:
Q  552 tataagctattagttgttttcataagctatcttagagaacttatgaaaataagc 605  Q
    |||||||||| |||||||||||||||||||  |  ||| |||||||||||||||    
T  46104644 tataagctataagttgttttcataagctatgctgaagagcttatgaaaataagc 46104591  T

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Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 566 - 611
Target Start/End: Complemental strand, 47559664 - 47559619
Alignment:
Q  566 tgttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    |||||||||||| ||| || |||||||||||||||| |||||||||    
T  47559664 tgttttcataagttattttggagaacttatgaaaatgagccgaaaa 47559619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 51; Significance: 8e-20; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 529 - 611
Target Start/End: Complemental strand, 178425 - 178343
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    ||||||||||| |||| || |||||||||||||||| |||||||| |||| ||||| |||||||||||||||||||| |||||    
T  178425 aaaataaagttaaattattgtcgtataagctattagctgttttcacaagccatctttgagaacttatgaaaataagctgaaaa 178343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 8e-20; HSPs: 74)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 542 - 604
Target Start/End: Complemental strand, 35571718 - 35571656
Alignment:
Q  542 attgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataag 604  Q
    |||||||||||||||||||| || |||||||||||||||||||||||||||| ||||||||||    
T  35571718 attgttttcgtataagctataagctgttttcataagctatcttagagaacttgtgaaaataag 35571656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 498 - 611
Target Start/End: Original strand, 3155543 - 3155655
Alignment:
Q  498 tatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatga 597  Q
    |||||||||||||||||||| | |||| |||||| ||||||| ||||||||| ||| ||||||  || ||||||||||| |||||||  |||||| ||||    
T  3155543 tatgtataagctatttctatagcaaaagataaaa-taaagttaaattgtttttgtacaagctacaagctgttttcataaactatcttgaagaactaatga 3155641  T
Q  598 aaataagccgaaaa 611  Q
    |||||||| |||||    
T  3155642 aaataagctgaaaa 3155655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 499 - 611
Target Start/End: Original strand, 17884009 - 17884120
Alignment:
Q  499 atgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaa 598  Q
    |||| ||||||||||||||   |||| |||||| ||||||| ||||||||| ||||||| ||| ||||||||||||||||||| || |||| ||||||||    
T  17884009 atgtgtaagctatttctataacaaaagataaaa-taaagttaaattgtttttgtataagttatcagttgttttcataagctatattggagagcttatgaa 17884107  T
Q  599 aataagccgaaaa 611  Q
    ||| ||| |||||    
T  17884108 aattagctgaaaa 17884120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 530 - 616
Target Start/End: Complemental strand, 53294213 - 53294127
Alignment:
Q  530 aaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaatagct 616  Q
    ||||||| || ||||||||| ||||| ||||| ||||||||| |||| |||| |||||||||||||||||| |||| ||||||||||    
T  53294213 aaataaatttaaattgtttttgtatatgctataagttgtttttataaactatattagagaacttatgaaaacaagctgaaaatagct 53294127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 496 - 604
Target Start/End: Complemental strand, 54392950 - 54392844
Alignment:
Q  496 cttatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttat 595  Q
    ||||||||||||||||||||||  || || | | |||||||||| ||||||||| ||||| |||||||| |||||| ||||| |||||| ||||| || |    
T  54392950 cttatgtataagctatttctat--aataaaaaataaataaagttaaattgtttttgtatatgctattagctgttttaataagatatcttggagaaatttt 54392853  T
Q  596 gaaaataag 604  Q
    |||||||||    
T  54392852 gaaaataag 54392844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 496 - 604
Target Start/End: Original strand, 1706560 - 1706667
Alignment:
Q  496 cttatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttat 595  Q
    |||||||| ||||||||| ||| ||||||  ||||| ||| ||| ||||||||||||| ||||||| || ||||||||||| ||||||| || | |||||    
T  1706560 cttatgtagaagctatttttatagaaaaagttaaaa-taatgttcaattgttttcgtagaagctataagctgttttcataaactatcttggacagcttat 1706658  T
Q  596 gaaaataag 604  Q
    |||||||||    
T  1706659 gaaaataag 1706667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 529 - 605
Target Start/End: Complemental strand, 17822965 - 17822889
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagc 605  Q
    ||||| ||||| ||||||| |  |||| ||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  17822965 aaaattaagttaaattgttattttatatgctataagttgttttcataagctatcttggagaacttatgaaaataagc 17822889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 496 - 584
Target Start/End: Original strand, 25885797 - 25885884
Alignment:
Q  496 cttatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatctt 584  Q
    ||||||||| |||| ||||||| | |||| |||||| ||||||| |||||||||||| |||||||| ||||||||||||||| ||||||    
T  25885797 cttatgtattagctctttctatagcaaaagataaaa-taaagttaaattgttttcgtgtaagctataagttgttttcataagttatctt 25885884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 529 - 605
Target Start/End: Complemental strand, 27043930 - 27043854
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagc 605  Q
    ||||||||||| ||||||||||||||||||||| || |||||| |||| ||||||| |||||| |||||| ||||||    
T  27043930 aaaataaagttaaattgttttcgtataagctataagatgtttttataaactatcttggagaacgtatgaatataagc 27043854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 496 - 614
Target Start/End: Complemental strand, 437565 - 437447
Alignment:
Q  496 cttatgtataagctatttct-atggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaactta 594  Q
    |||||||||||||||||| | || | |||| |||||| ||||||| |||||| ||| |||||| | | ||||||||||||||||||| ||||||  ||||    
T  437565 cttatgtataagctattttttatagcaaaagataaaa-taaagttaaattgtgttcatataagttttaagttgttttcataagctattttagaggcctta 437467  T
Q  595 tgaaaataagccgaaaatag 614  Q
    ||||||||||| || |||||    
T  437466 tgaaaataagctgagaatag 437447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 529 - 611
Target Start/End: Complemental strand, 47119065 - 47118983
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    |||| |||||| |||||||||| |||||||||| |||||| |||||| ||||||||  |||||||||||| |||||| |||||    
T  47119065 aaaacaaagttaaattgttttcatataagctataagttgtattcatatgctatcttgaagaacttatgaagataagctgaaaa 47118983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 501 - 611
Target Start/End: Original strand, 49219082 - 49219191
Alignment:
Q  501 gtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaa 600  Q
    ||||||| |||||||||   ||||||||||| ||||||  |||| ||||| |||||||||| |||||||||||||| |||||||| |||  ||||| |||    
T  49219082 gtataagttatttctataacaaaatataaaa-taaagtcaaattattttcatataagctataagttgttttcataaactatcttaaagagattatggaaa 49219180  T
Q  601 taagccgaaaa 611  Q
    ||||| |||||    
T  49219181 taagctgaaaa 49219191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 529 - 611
Target Start/End: Original strand, 51630081 - 51630163
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    ||||||||||| |||||||||  |||||||||| || | |||||||||||||||||  |||| |||||||||||||| |||||    
T  51630081 aaaataaagttaaattgttttgatataagctataagctattttcataagctatcttgaagaatttatgaaaataagctgaaaa 51630163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 507 - 611
Target Start/End: Original strand, 22666437 - 22666541
Alignment:
Q  507 gctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattag-ttgttttcataagctatcttagagaacttatgaaaataagc 605  Q
    ||||||||||| | |||| |||||| ||||||| |||| ||| |||||||||||| || || ||||||||||||||| | |||||||||||| |||||||    
T  22666437 gctatttctatagcaaaacataaaa-taaagttcaattttttacgtataagctataagctttttttcataagctatcatggagaacttatgacaataagc 22666535  T
Q  606 cgaaaa 611  Q
     |||||    
T  22666536 agaaaa 22666541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 503 - 604
Target Start/End: Complemental strand, 55414545 - 55414445
Alignment:
Q  503 ataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaata 602  Q
    ||||||||||||||| | |||| |||||| ||||||| | || |||| | ||| ||||| | ||||||||||||| |||||| |||||||||||||||||    
T  55414545 ataagctatttctattggaaaagataaaa-taaagttaatttttttttgcatatgctataaattgttttcataagttatcttggagaacttatgaaaata 55414447  T
Q  603 ag 604  Q
    ||    
T  55414446 ag 55414445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 539 - 603
Target Start/End: Original strand, 8468928 - 8468992
Alignment:
Q  539 ttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataa 603  Q
    |||||| ||||| |||||||||||||||||||||||||| |||  |||||| |||||||||||||    
T  8468928 ttaatttttttcatataagctattagttgttttcataagttattctagagagcttatgaaaataa 8468992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 544 - 616
Target Start/End: Complemental strand, 30207656 - 30207584
Alignment:
Q  544 tgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaatagct 616  Q
    ||||||| |||||||||| |||||||||||||||||| ||||||||  ||||| |||||||| ||||| ||||    
T  30207656 tgttttcatataagctataagttgttttcataagctaccttagagagattatggaaataagctgaaaacagct 30207584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 496 - 612
Target Start/End: Original strand, 44138497 - 44138612
Alignment:
Q  496 cttatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttat 595  Q
    |||||||||||||| ||||||| | | || |||||| ||||||| ||||| |||||||||  || | | |||||||||||| | || || ||||||||||    
T  44138497 cttatgtataagctgtttctatagcagaagataaaa-taaagttaaattgctttcgtatagcctgtaatttgttttcataaaccatgttggagaacttat 44138595  T
Q  596 gaaaataagccgaaaat 612  Q
    |||||||||| ||||||    
T  44138596 gaaaataagctgaaaat 44138612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 542 - 602
Target Start/End: Complemental strand, 49940078 - 49940018
Alignment:
Q  542 attgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaata 602  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||| | |||||| ||||    
T  49940078 attgttttcgtataagctattagctgttttcataagctatcttggagcatttatgataata 49940018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 500 - 605
Target Start/End: Complemental strand, 1203245 - 1203140
Alignment:
Q  500 tgtataagctatttctatggaaaaatataaaaataaagtttaattgtttt---cgtataagctattagttgttttcataagctatcttagagaacttatg 596  Q
    |||||||||||||||||| | |||| |||||| ||||||  |||| ||||   |||||||||||| |||||| |||||||| |||||| ||||||||||     
T  1203245 tgtataagctatttctatagcaaaacataaaa-taaagt--aatttttttttccgtataagctataagttgtcttcataagttatcttggagaacttatt 1203149  T
Q  597 aaaataagc 605  Q
    |||||||||    
T  1203148 aaaataagc 1203140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 497 - 604
Target Start/End: Original strand, 49202584 - 49202690
Alignment:
Q  497 ttatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatg 596  Q
    |||||||||||||||||||||   ||||  |||||  | | |||||||||||  ||||||||||| |||||||||| ||||||||||| || |||| |||    
T  49202584 ttatgtataagctatttctataataaaaggtaaaac-agattttaattgtttcggtataagctataagttgttttcgtaagctatcttggataactaatg 49202682  T
Q  597 aaaataag 604  Q
    ||||||||    
T  49202683 aaaataag 49202690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 496 - 605
Target Start/End: Complemental strand, 8422969 - 8422863
Alignment:
Q  496 cttatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttat 595  Q
    |||||||||||||||||| |||  ||||| |||||| ||||||   ||||||||| |||||||||| ||||||||||| || ||||||| ||||  ||||    
T  8422969 cttatgtataagctatttttataaaaaaagataaaa-taaagtc--attgttttcatataagctataagttgttttcacaatctatcttggagagtttat 8422873  T
Q  596 gaaaataagc 605  Q
    | ||||||||    
T  8422872 gcaaataagc 8422863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 541 - 611
Target Start/End: Original strand, 20031731 - 20031801
Alignment:
Q  541 aattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    |||||||||| | |||||||| ||  ||||||||||||||| ||||||||||||||||||| ||| |||||    
T  20031731 aattgttttcatgtaagctataagcagttttcataagctattttagagaacttatgaaaatgagctgaaaa 20031801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 529 - 611
Target Start/End: Original strand, 42685394 - 42685476
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    ||||| ||||| |||||||||  |||||||| | ||||||||||||||||||| || |||||| | |||||||||||| ||||    
T  42685394 aaaatgaagttaaattgtttttttataagctctaagttgttttcataagctattttggagaacgtgtgaaaataagccaaaaa 42685476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 533 - 611
Target Start/End: Complemental strand, 50004240 - 50004162
Alignment:
Q  533 taaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    ||||||| |||||||||| ||||| | || || ||||||| |||| |||||| |||||||||||||||||||| |||||    
T  50004240 taaagttaaattgttttcatataaacaatgagctgttttcctaagttatcttggagaacttatgaaaataagctgaaaa 50004162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 529 - 603
Target Start/End: Original strand, 56480318 - 56480392
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataa 603  Q
    ||||||||||| ||||||||  ||||||| ||| || ||||||||||| ||||||| |||| |||||||||||||    
T  56480318 aaaataaagttaaattgtttatgtataagttataagctgttttcataaactatcttggagagcttatgaaaataa 56480392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 544 - 605
Target Start/End: Complemental strand, 16200066 - 16200005
Alignment:
Q  544 tgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagc 605  Q
    |||||| ||||| ||||| || ||||||||||||||||||| ||| ||||||||||||||||    
T  16200066 tgtttttgtatatgctataagctgttttcataagctatcttggaggacttatgaaaataagc 16200005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 507 - 611
Target Start/End: Original strand, 22661958 - 22662062
Alignment:
Q  507 gctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgtt-ttcataagctatcttagagaacttatgaaaataagc 605  Q
    ||||||||||| | |||| |||||| ||||||| |||| ||| |||||||||||| || | || ||||||||||||| | |||||||||||| |||||||    
T  22661958 gctatttctatagcaaaacataaaa-taaagttcaattttttacgtataagctataagcttttcttcataagctatcatggagaacttatgacaataagc 22662056  T
Q  606 cgaaaa 611  Q
     |||||    
T  22662057 agaaaa 22662062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 529 - 602
Target Start/End: Original strand, 32421075 - 32421148
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaata 602  Q
    |||||||||||||||||||| | |||||||||| ||  |||| |||||||||| ||  ||||||||||||||||    
T  32421075 aaaataaagtttaattgtttacatataagctataagcagtttccataagctattttgaagaacttatgaaaata 32421148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 499 - 616
Target Start/End: Original strand, 44319891 - 44320006
Alignment:
Q  499 atgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaa 598  Q
    |||||||| ||||||||||  ||||| |||||| ||||||  || ||||||| |||||||||  || | |||| |||||||||| |||||||||||||||    
T  44319891 atgtataaactatttctata-aaaaagataaaa-taaagtcgaactgttttcatataagctacaagctattttgataagctatcctagagaacttatgaa 44319988  T
Q  599 aataagccgaaaatagct 616  Q
    ||| ||  ||||||||||    
T  44319989 aattagttgaaaatagct 44320006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 498 - 610
Target Start/End: Complemental strand, 52315327 - 52315216
Alignment:
Q  498 tatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttc-gtataagctattagttgttttcataagctatcttagagaacttatg 596  Q
    |||||||||||||||||||  | |||| || ||| |||||||||||||||||  ||| ||| ||| |||||||| |||||||||| || || ||||||||    
T  52315327 tatgtataagctatttctacagcaaaagatgaaa-taaagtttaattgtttttagta-aagttataagttgtttccataagctattttggaaaacttatg 52315230  T
Q  597 aaaataagccgaaa 610  Q
    ||||||||| ||||    
T  52315229 aaaataagctgaaa 52315216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 496 - 600
Target Start/End: Original strand, 7601697 - 7601800
Alignment:
Q  496 cttatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttat 595  Q
    ||||||||||||||||| |||| | |||  |||||| ||||||| ||||||||| ||||| | ||| ||| ||||| |||| |||| ||||||||||||     
T  7601697 cttatgtataagctattcctatagcaaaggataaaa-taaagttaaattgtttttgtatatgttatgagtagtttttataaactatattagagaacttaa 7601795  T
Q  596 gaaaa 600  Q
    |||||    
T  7601796 gaaaa 7601800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 503 - 603
Target Start/End: Original strand, 9760385 - 9760484
Alignment:
Q  503 ataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaata 602  Q
    ||||| ||||| ||| |||||| |||||| ||||||| |||| ||||   ||| ||||| ||||||||| ||||||||| || |||||||||||||||||    
T  9760385 ataagttatttttattgaaaaagataaaa-taaagttaaattcttttttaatatgctataagttgtttttataagctatattggagaacttatgaaaata 9760483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 528 - 604
Target Start/End: Complemental strand, 28300400 - 28300324
Alignment:
Q  528 aaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataag 604  Q
    |||||||||||| ||||||||| ||||||||||| |  | |||||||| ||||||||  ||| ||||||||||||||    
T  28300400 aaaaataaagttaaattgtttttgtataagctataaactattttcataggctatcttgaagagcttatgaaaataag 28300324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 541 - 605
Target Start/End: Original strand, 29778777 - 29778841
Alignment:
Q  541 aattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagc 605  Q
    |||||||||| |||||||| | |||||||||||||||||| |||  ||| |||||||||||||||    
T  29778777 aattgttttcatataagctgtaagttgttttcataagctaccttgaagagcttatgaaaataagc 29778841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 544 - 616
Target Start/End: Original strand, 36048518 - 36048590
Alignment:
Q  544 tgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaatagct 616  Q
    ||||||| |||||||||| || | |||||| ||||||||||||||| |||||| |||||||| || |||||||    
T  36048518 tgttttcatataagctataagctattttcaaaagctatcttagagagcttatggaaataagctgacaatagct 36048590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 496 - 598
Target Start/End: Original strand, 2733258 - 2733360
Alignment:
Q  496 cttatgtataagctatttctatggaaaaatataaaaataaagtttaattgt-tttcgtataagctattagttgttttcataagctatcttagagaactta 594  Q
    ||||||||||||| |||| |||| ||||| |||||| ||||||| || | | ||| | ||||| ||||||||||||||||||| |||| |||||| ||||    
T  2733258 cttatgtataagcaatttttatgaaaaaagataaaa-taaagttaaactatattttgcataagttattagttgttttcataagatatcatagagagctta 2733356  T
Q  595 tgaa 598  Q
    ||||    
T  2733357 tgaa 2733360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 541 - 604
Target Start/End: Original strand, 2996555 - 2996618
Alignment:
Q  541 aattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataag 604  Q
    |||||||||  |||||| ||| |||||||||||||||||||||| |||| | ||||||||||||    
T  2996555 aattgtttttatataagttataagttgttttcataagctatcttggagagcgtatgaaaataag 2996618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 551 - 610
Target Start/End: Original strand, 42121480 - 42121539
Alignment:
Q  551 gtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaa 610  Q
    ||||||||||| |||||||||||| ||||||||| |||||||| || |||||||| ||||    
T  42121480 gtataagctataagttgttttcatgagctatcttggagaacttgtggaaataagctgaaa 42121539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 563 - 610
Target Start/End: Complemental strand, 55084547 - 55084500
Alignment:
Q  563 agttgttttcataagctatcttagagaacttatgaaaataagccgaaa 610  Q
    |||||||||||| |||||||||||||| ||||||||||||||| ||||    
T  55084547 agttgttttcatgagctatcttagagagcttatgaaaataagctgaaa 55084500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 529 - 611
Target Start/End: Original strand, 24929463 - 24929545
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    |||||||||| ||| ||||||| || ||||||| |||||||||||||| || |  |||||| |||||| |||||||| |||||    
T  24929463 aaaataaagtctaactgttttcataaaagctataagttgttttcataaactctactagagagcttatggaaataagctgaaaa 24929545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 530 - 611
Target Start/End: Original strand, 25332745 - 25332827
Alignment:
Q  530 aaataaagtttaattgttttcgtataagctattagttgttttcataagctatctta-gagaacttatgaaaataagccgaaaa 611  Q
    |||| ||||| ||||||||| ||||||||| | || | |||| |||||||||||||  ||||||||||||||||||| |||||    
T  25332745 aaatgaagttaaattgtttttgtataagctctaagctatttttataagctatcttatcagaacttatgaaaataagctgaaaa 25332827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 496 - 604
Target Start/End: Original strand, 40174503 - 40174608
Alignment:
Q  496 cttatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttat 595  Q
    |||||||||||||||||| ||   |||||||   || ||||||| |||||||||| || ||||||| || |||||||||||||||  || |||||||| |    
T  40174503 cttatgtataagctatttatagcaaaaaata---aattaaagttaaattgttttcataaaagctataagctgttttcataagctacattggagaacttgt 40174599  T
Q  596 gaaaataag 604  Q
    || ||||||    
T  40174600 gataataag 40174608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 529 - 603
Target Start/End: Complemental strand, 50681189 - 50681115
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataa 603  Q
    ||||||| ||| ||||||||| ||||| ||||| ||||||||  ||||||||| || ||||| ||||||||||||    
T  50681189 aaaataatgttaaattgtttttgtatatgctataagttgtttatataagctatattggagaaattatgaaaataa 50681115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 565 - 603
Target Start/End: Complemental strand, 51044544 - 51044506
Alignment:
Q  565 ttgttttcataagctatcttagagaacttatgaaaataa 603  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  51044544 ttgttttcataagctatcctagagaacttatgaaaataa 51044506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 566 - 611
Target Start/End: Complemental strand, 29601071 - 29601026
Alignment:
Q  566 tgttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    |||||||||| |||||| |||||||||||||||||||||| |||||    
T  29601071 tgttttcatatgctatcctagagaacttatgaaaataagctgaaaa 29601026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 506 - 611
Target Start/End: Original strand, 29912897 - 29913000
Alignment:
Q  506 agctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagc 605  Q
    |||||||||||| | |||| |||||| ||||||  ||||||||| ||||| | ||  ||| |||||||||||||||||| || ||||||| |||||||||    
T  29912897 agctatttctatagcaaaaaataaaa-taaagtaaaattgtttt-gtatatgttaaaagtcgttttcataagctatcttggacaacttataaaaataagc 29912994  T
Q  606 cgaaaa 611  Q
     |||||    
T  29912995 tgaaaa 29913000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 567 - 611
Target Start/End: Complemental strand, 825552 - 825508
Alignment:
Q  567 gttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    ||||||||||||||| || |||||||||||||||||||| |||||    
T  825552 gttttcataagctattttggagaacttatgaaaataagctgaaaa 825508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 496 - 616
Target Start/End: Original strand, 6364087 - 6364206
Alignment:
Q  496 cttatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttat 595  Q
    ||||||||||||||||||||||   |||| |||||| ||||||  |||| | |||  ||||||||| ||   ||||||||||||||  | |||||||||     
T  6364087 cttatgtataagctatttctataacaaaagataaaa-taaagtgaaattctgttcacataagctataagcaattttcataagctataatggagaacttac 6364185  T
Q  596 gaaaataagccgaaaatagct 616  Q
    |||||||||| ||||| ||||    
T  6364186 gaaaataagctgaaaacagct 6364206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 563 - 611
Target Start/End: Complemental strand, 11158423 - 11158375
Alignment:
Q  563 agttgttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    ||||||||||||||||||||||||||| ||| || |||||||| |||||    
T  11158423 agttgttttcataagctatcttagagagcttgtggaaataagctgaaaa 11158375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 558 - 605
Target Start/End: Complemental strand, 2111121 - 2111074
Alignment:
Q  558 ctattagttgttttcataagctatcttagagaacttatgaaaataagc 605  Q
    |||| ||||||||||||||||||||||  || ||||||||||||||||    
T  2111121 ctataagttgttttcataagctatcttgaaggacttatgaaaataagc 2111074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 541 - 616
Target Start/End: Complemental strand, 19395204 - 19395129
Alignment:
Q  541 aattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaatagct 616  Q
    ||||||||| ||||||||||| |  ||||||||| ||||||||| ||||| | ||  |||||||| ||||||||||    
T  19395204 aattgtttttgtataagctataaaatgttttcattagctatcttggagaattgattgaaataagctgaaaatagct 19395129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 566 - 601
Target Start/End: Original strand, 25950746 - 25950781
Alignment:
Q  566 tgttttcataagctatcttagagaacttatgaaaat 601  Q
    |||||||||||||||||||||||||||||| |||||    
T  25950746 tgttttcataagctatcttagagaacttatcaaaat 25950781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 573 - 616
Target Start/End: Complemental strand, 28614864 - 28614821
Alignment:
Q  573 ataagctatcttagagaacttatgaaaataagccgaaaatagct 616  Q
    |||||||||| |||||||||||||||||||||| ||||| ||||    
T  28614864 ataagctatcctagagaacttatgaaaataagctgaaaagagct 28614821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 549 - 616
Target Start/End: Complemental strand, 35507537 - 35507470
Alignment:
Q  549 tcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaatagct 616  Q
    ||||||||||||| |||||||||||||  ||||| || ||| ||||||||| |||||  |||||||||    
T  35507537 tcgtataagctataagttgttttcatacactatcctaaagagcttatgaaagtaagctaaaaatagct 35507470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 529 - 584
Target Start/End: Complemental strand, 52746940 - 52746885
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatctt 584  Q
    ||||||||||| ||||||||| || ||||| || || |||||||||||||||||||    
T  52746940 aaaataaagttaaattgtttttgtgtaagccataagctgttttcataagctatctt 52746885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 499 - 599
Target Start/End: Original strand, 55437029 - 55437127
Alignment:
Q  499 atgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagtt-gttttcataagctatcttagagaacttatga 597  Q
    ||||||||||||||||||| | |||||||||||    |||| |||| ||  |||||||||| | |||| ||||||||||| ||||||||| || ||||||    
T  55437029 atgtataagctatttctatagcaaaatataaaat---agttaaattattgacgtataagctgtaagtttgttttcataagttatcttagaaaatttatga 55437125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 530 - 605
Target Start/End: Original strand, 679225 - 679298
Alignment:
Q  530 aaataaagtttaattgt-tttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagc 605  Q
    |||||||||| |||||  ||| ||||||||||| || |||||||||||| ||||||   ||||||||||||||||||    
T  679225 aaataaagttaaattggcttttgtataagctataagctgttttcataagttatctt---gaacttatgaaaataagc 679298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 563 - 605
Target Start/End: Complemental strand, 4798632 - 4798590
Alignment:
Q  563 agttgttttcataagctatcttagagaacttatgaaaataagc 605  Q
    |||||||||||||||||||||| |||| |||||| ||||||||    
T  4798632 agttgttttcataagctatcttggagagcttatgcaaataagc 4798590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 496 - 602
Target Start/End: Original strand, 23503497 - 23503602
Alignment:
Q  496 cttatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttat 595  Q
    ||||||||||| ||| ||||||   ||||||||||| ||||||| |||| |||| ||| |||  || || ||||| ||||||||||||| || |||||||    
T  23503497 cttatgtataatctaattctataacaaaatataaaa-taaagttaaattatttttgtagaagacataagctgtttccataagctatctttgaaaacttat 23503595  T
Q  596 gaaaata 602  Q
     ||||||    
T  23503596 aaaaata 23503602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 529 - 603
Target Start/End: Original strand, 26883965 - 26884039
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataa 603  Q
    ||||| ||||| |||||||||| |||||||||| ||| |||||| ||| || | || |||||| |||||||||||    
T  26883965 aaaatgaagttaaattgttttcatataagctataagtcgttttcgtaaactttattggagaacctatgaaaataa 26884039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 529 - 611
Target Start/End: Original strand, 29263340 - 29263422
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    |||||||||||  |||||||||  |||||| || |||||||||||||||||||| |  ||| ||| || |||||||| |||||    
T  29263340 aaaataaagttacattgttttcaaataagcgataagttgttttcataagctatcctgcagagcttgtggaaataagctgaaaa 29263422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 496 - 605
Target Start/End: Complemental strand, 30338724 - 30338615
Alignment:
Q  496 cttatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgtttt-cataagctatcttagagaactta 594  Q
    ||||||||||| ||||||||||   |||| ||| || ||||||| || ||||||| |||||||||| |  |||||| |||||||| |||| ||||  |||    
T  30338724 cttatgtataaactatttctataacaaaagatagaa-taaagttaaactgttttcatataagctataaactgtttttcataagctctcttggagagttta 30338626  T
Q  595 tgaaaataagc 605  Q
    |||||||||||    
T  30338625 tgaaaataagc 30338615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 567 - 613
Target Start/End: Complemental strand, 32421321 - 32421275
Alignment:
Q  567 gttttcataagctatcttagagaacttatgaaaataagccgaaaata 613  Q
    ||||| |||||||||||||||||  |||||||||||||| |||||||    
T  32421321 gtttttataagctatcttagagaggttatgaaaataagctgaaaata 32421275  T

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Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 541 - 614
Target Start/End: Original strand, 45214353 - 45214426
Alignment:
Q  541 aattgttttcgtataagctattagttgttttcataagctatcttagagaactt-atgaaaataagccgaaaatag 614  Q
    ||||||||||| ||||||||| || || |||||||| ||||||| |||||||| || ||||||||| ||||||||    
T  45214353 aattgttttcgaataagctataagctg-tttcataaactatcttggagaacttaataaaaataagctgaaaatag 45214426  T

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Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 529 - 575
Target Start/End: Original strand, 47946168 - 47946214
Alignment:
Q  529 aaaataaagtttaattgttttcgtataagctattagttgttttcata 575  Q
    ||||| ||||| ||||||||||||||||||||| | |||||||||||    
T  47946168 aaaatgaagttaaattgttttcgtataagctataaattgttttcata 47946214  T

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Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 531 - 604
Target Start/End: Original strand, 10192256 - 10192328
Alignment:
Q  531 aataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataag 604  Q
    ||||||||  |||||||||| |||||| ||| ||||||||||| |||||||| | |||| | ||||||||||||    
T  10192256 aataaagtcaaattgttttcatataagttataagttgttttcaaaagctatcctggagagc-tatgaaaataag 10192328  T

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Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 575 - 616
Target Start/End: Complemental strand, 13126630 - 13126589
Alignment:
Q  575 aagctatcttagagaacttatgaaaataagccgaaaatagct 616  Q
    |||||||||| |||||||||||||||||||| ||||| ||||    
T  13126630 aagctatcttcgagaacttatgaaaataagctgaaaaaagct 13126589  T

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Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 552 - 589
Target Start/End: Complemental strand, 16494882 - 16494845
Alignment:
Q  552 tataagctattagttgttttcataagctatcttagaga 589  Q
    |||||||||| |||||||||||||||||||||| ||||    
T  16494882 tataagctataagttgttttcataagctatcttggaga 16494845  T

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Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 542 - 611
Target Start/End: Complemental strand, 30066853 - 30066784
Alignment:
Q  542 attgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    ||||||||||||||| || | || |||| |||||||||||||| |||| ||||| |||| |||| |||||    
T  30066853 attgttttcgtataaactgtaagctgttctcataagctatcttggagagcttataaaaacaagctgaaaa 30066784  T

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Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 552 - 605
Target Start/End: Original strand, 42866061 - 42866114
Alignment:
Q  552 tataagctattagttgttttcataagctatcttagagaacttatgaaaataagc 605  Q
    |||||||||| |||||||||||||||||||| | |||| |||||| || |||||    
T  42866061 tataagctataagttgttttcataagctatccttgagagcttatggaagtaagc 42866114  T

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Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 566 - 611
Target Start/End: Original strand, 47800630 - 47800675
Alignment:
Q  566 tgttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    |||||||||||||||||||  ||| ||||||||||||||| |||||    
T  47800630 tgttttcataagctatcttgaagagcttatgaaaataagctgaaaa 47800675  T

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Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 531 - 600
Target Start/End: Original strand, 50298499 - 50298568
Alignment:
Q  531 aataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaa 600  Q
    ||||||||| ||||||||||  ||||||||| |   |||||||||||| ||||| || ||||||||||||    
T  50298499 aataaagttaaattgttttcacataagctataatcagttttcataagccatcttggaaaacttatgaaaa 50298568  T

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Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 566 - 611
Target Start/End: Complemental strand, 53673721 - 53673676
Alignment:
Q  566 tgttttcataagctatcttagagaacttatgaaaataagccgaaaa 611  Q
    ||||||||||||||||||| |||| |||||| |||||||| |||||    
T  53673721 tgttttcataagctatcttggagagcttatgtaaataagctgaaaa 53673676  T

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Target: scaffold0024 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 496 - 603
Target Start/End: Complemental strand, 21410 - 21311
Alignment:
Q  496 cttatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttat 595  Q
    |||||||||||||||||| ||| | |||| |||||| ||||||| ||||||||||||||||||       |||||||||||||||| || ||||| ||||    
T  21410 cttatgtataagctatttttataggaaaagataaaa-taaagttaaattgttttcgtataagc-------tgttttcataagctatattggagaaattat 21319  T

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Target: scaffold0024; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 496 - 584
Target Start/End: Original strand, 27514 - 27601
Alignment:
Q  496 cttatgtataagctatttctatggaaaaatataaaaataaagtttaattgttttcgtataagctattagttgttttcataagctatctt 584  Q
    |||||||||||| |||||||||   | || || ||||||||||  |||||||||| ||||| |||| |||||||||||||| |||||||    
T  27514 cttatgtataagttatttctataacagaagat-aaaataaagtcaaattgttttcatataaactataagttgttttcataaactatctt 27601  T

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Target: scaffold0475 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 526 - 570
Target Start/End: Complemental strand, 11858 - 11814
Alignment:
Q  526 ataaaaataaagtttaattgttttcgtataagctattagttgttt 570  Q
    |||||| ||||||| ||||||||||||||||||||| ||||||||    
T  11858 ataaaattaaagttaaattgttttcgtataagctataagttgttt 11814  T

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Target: scaffold0100 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 547 - 581
Target Start/End: Original strand, 42604 - 42638
Alignment:
Q  547 tttcgtataagctattagttgttttcataagctat 581  Q
    |||| ||||||||||||||||||||||||||||||    
T  42604 tttcatataagctattagttgttttcataagctat 42638  T

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Target: scaffold0528 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0528
Description:

Target: scaffold0528; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 541 - 594
Target Start/End: Complemental strand, 1060 - 1007
Alignment:
Q  541 aattgttttcgtataagctattagttgttttcataagctatcttagagaactta 594  Q
    ||||||||||||||| ||||| |||||||| ||||| |||| || |||||||||    
T  1060 aattgttttcgtatatgctataagttgtttccataaactattttggagaactta 1007  T

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Target: scaffold0167 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 558 - 595
Target Start/End: Original strand, 17275 - 17312
Alignment:
Q  558 ctattagttgttttcataagctatcttagagaacttat 595  Q
    |||| |||||||||||||||||||||| ||||||||||    
T  17275 ctataagttgttttcataagctatcttggagaacttat 17312  T

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Target: scaffold0003 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 563 - 616
Target Start/End: Original strand, 306330 - 306383
Alignment:
Q  563 agttgttttcataagctatcttagagaacttatgaaaataagccgaaaatagct 616  Q
    |||||||||||||||||||| |||||| |||||| || ||||| ||||| ||||    
T  306330 agttgttttcataagctatcctagagagcttatgtaagtaagctgaaaacagct 306383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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