View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20197_high_29 (Length: 310)
Name: NF20197_high_29
Description: NF20197
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20197_high_29 |
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Alignment Details
Target: chr2 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 6 - 281
Target Start/End: Complemental strand, 35692370 - 35692093
Alignment:
| Q |
6 |
aatataaaatattcgttgctggaagtgaacacag--gaaaagaagaatggtaattagaaaaaagataggtatgatcattattaatctataaattaacata |
103 |
Q |
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| T |
35692370 |
aatattaaatattcgttacttgaattgaacacagaggaaaagaagaatggtaattagaaaaaagataggtatggtcattattaatctataaattaacata |
35692271 |
T |
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| Q |
104 |
gactgatccacattgcatacatgttaataagatgatgatactatcttcaagccgctggtgactgtgtaattgcacccaccatgtttagtgctatgcatgg |
203 |
Q |
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| T |
35692270 |
gactgatccacattgcatacatgttaacaagatgatgatactatcttcaagctgctggtgactgtgtaattgcacccaccatgtttagtgctatgcatgg |
35692171 |
T |
|
| Q |
204 |
ctgatcaataggtacctaaacagatataagcatagacaaatacttggaagttaaatccatattaaaaaagaagcacaa |
281 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
35692170 |
ctgatcaataggtacctaaacagatataagcatagacaaatacttggaagttaaatccatattaaaaaaaaagcacaa |
35692093 |
T |
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