View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20197_low_22 (Length: 362)

Name: NF20197_low_22
Description: NF20197
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20197_low_22
NF20197_low_22
[»] chr2 (24 HSPs)
chr2 (206-346)||(39163556-39163696)
chr2 (206-346)||(39203912-39204061)
chr2 (249-341)||(39225130-39225222)
chr2 (296-341)||(39180123-39180168)
chr2 (16-66)||(3177083-3177136)
chr2 (291-346)||(39372608-39372663)
chr2 (18-66)||(27349945-27349996)
chr2 (18-62)||(39167373-39167420)
chr2 (249-346)||(39385895-39385992)
chr2 (18-69)||(44913809-44913863)
chr2 (16-66)||(4264083-4264136)
chr2 (20-66)||(33660374-33660423)
chr2 (71-106)||(39165016-39165051)
chr2 (18-63)||(7006930-7006978)
chr2 (21-66)||(44286098-44286146)
chr2 (18-66)||(4167068-4167119)
chr2 (18-66)||(19313997-19314048)
chr2 (18-66)||(19424634-19424685)
chr2 (18-66)||(31570740-31570791)
chr2 (23-66)||(29242144-29242190)
chr2 (18-65)||(33709239-33709289)
chr2 (74-114)||(39203763-39203803)
chr2 (139-171)||(39203835-39203867)
chr2 (301-341)||(39217869-39217909)
[»] chr5 (10 HSPs)
chr5 (249-341)||(33563794-33563886)
chr5 (19-66)||(27330451-27330501)
chr5 (18-66)||(6824457-6824508)
chr5 (18-66)||(22019778-22019829)
chr5 (18-62)||(32563295-32563342)
chr5 (18-66)||(36866908-36866959)
chr5 (18-62)||(39572965-39573012)
chr5 (18-66)||(40133531-40133582)
chr5 (18-65)||(8741865-8741915)
chr5 (23-66)||(12910506-12910552)
[»] chr8 (6 HSPs)
chr8 (18-66)||(5299940-5299991)
chr8 (16-66)||(36694960-36695013)
chr8 (18-63)||(38644123-38644171)
chr8 (18-66)||(465987-466038)
chr8 (18-66)||(9864293-9864344)
chr8 (18-66)||(41910982-41911033)
[»] chr7 (11 HSPs)
chr7 (18-66)||(12165873-12165924)
chr7 (18-66)||(21991757-21991808)
chr7 (18-66)||(26588073-26588124)
chr7 (18-63)||(15672754-15672802)
chr7 (21-66)||(22687363-22687411)
chr7 (18-63)||(26980444-26980492)
chr7 (18-66)||(6546640-6546691)
chr7 (18-66)||(15612748-15612799)
chr7 (18-66)||(43686161-43686212)
chr7 (18-66)||(44598787-44598838)
chr7 (23-66)||(44413368-44413414)
[»] chr4 (10 HSPs)
chr4 (18-64)||(23761218-23761266)
chr4 (18-66)||(37775813-37775864)
chr4 (16-64)||(55241121-55241172)
chr4 (19-66)||(17272111-17272161)
chr4 (16-66)||(17167857-17167910)
chr4 (16-66)||(17173434-17173487)
chr4 (18-63)||(7703655-7703703)
chr4 (18-66)||(30002646-30002697)
chr4 (18-66)||(47253886-47253937)
chr4 (19-66)||(29584214-29584264)
[»] chr3 (8 HSPs)
chr3 (18-66)||(29163955-29164006)
chr3 (18-66)||(33698290-33698341)
chr3 (18-63)||(44891634-44891682)
chr3 (18-66)||(11466961-11467012)
chr3 (18-66)||(14586658-14586709)
chr3 (18-62)||(32373607-32373654)
chr3 (18-66)||(34133072-34133123)
chr3 (18-62)||(43348394-43348441)
[»] chr1 (6 HSPs)
chr1 (18-66)||(238496-238547)
chr1 (18-66)||(7079046-7079097)
chr1 (18-66)||(10181991-10182042)
chr1 (18-62)||(11742338-11742385)
chr1 (18-66)||(27227468-27227519)
chr1 (18-66)||(48620779-48620830)
[»] scaffold0318 (1 HSPs)
scaffold0318 (18-66)||(12055-12106)
[»] chr6 (1 HSPs)
chr6 (18-66)||(3879926-3879977)


Alignment Details
Target: chr2 (Bit Score: 125; Significance: 3e-64; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 206 - 346
Target Start/End: Complemental strand, 39163696 - 39163556
Alignment:
Q  206 ataagaaagagagagagttgcgtcaaagccaattaaatcaaattaagttagcacatttccattatggcatttgtttacaatagcttgttccagtccaaaa 305  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  39163696 ataagaaagagaaagagttgcgtcaaagccaattaaatcaaattaagttagcacatttccattatggcatttgtttacattagcttgttccagtccaaaa 39163597  T
Q  306 tctaatagcctttatgtgcttttagctcaagaatgcaatat 346  Q
     ||||||||||||||||||||||||||||||||||| ||||    
T  39163596 actaatagcctttatgtgcttttagctcaagaatgcgatat 39163556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 206 - 346
Target Start/End: Original strand, 39203912 - 39204061
Alignment:
Q  206 ataagaaagagagagagttgcgtcaaagccaattaaatcaaattaagttagcacatttccattatggcatttg---------tttacaatagcttgttcc 296  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||  |||||||         ||| || |||||||||||    
T  39203912 ataagaaagagagagagtcgcgtcaaagtcaattaaatcaaattaagttagcatatttccattaccgcatttgttttcattctttccattagcttgttcc 39204011  T
Q  297 agtccaaaatctaatagcctttatgtgcttttagctcaagaatgcaatat 346  Q
    ||||||| | ||||||||||||||||||||||||||||||||||| ||||    
T  39204012 agtccaataactaatagcctttatgtgcttttagctcaagaatgcgatat 39204061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 249 - 341
Target Start/End: Complemental strand, 39225222 - 39225130
Alignment:
Q  249 taagttagcacatttccattatggcatttgtttacaatagcttgttccagtccaaaatctaatagcctttatgtgcttttagctcaagaatgc 341  Q
    ||||||||||  |||||||||   |||||||||||| ||||||||| ||| |||||| |||| |||||||||||||||| |||||||||||||    
T  39225222 taagttagcaggtttccattaccccatttgtttacattagcttgtttcagcccaaaaactaacagcctttatgtgctttgagctcaagaatgc 39225130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 296 - 341
Target Start/End: Complemental strand, 39180168 - 39180123
Alignment:
Q  296 cagtccaaaatctaatagcctttatgtgcttttagctcaagaatgc 341  Q
    |||||||||| ||||| |||||||||||||||||||||||||||||    
T  39180168 cagtccaaaaactaattgcctttatgtgcttttagctcaagaatgc 39180123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 66
Target Start/End: Original strand, 3177083 - 3177136
Alignment:
Q  16 agaagaatacacttattctaattttat---accttgttttaagtgtaacacccc 66  Q
    ||||||||||||||| |||||||||||   ||||||||||||||||||||||||    
T  3177083 agaagaatacacttaatctaattttatcttaccttgttttaagtgtaacacccc 3177136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 291 - 346
Target Start/End: Complemental strand, 39372663 - 39372608
Alignment:
Q  291 tgttccagtccaaaatctaatagcctttatgtgcttttagctcaagaatgcaatat 346  Q
    ||||||||| ||||| ||||| ||||||||||||||| ||||||||||||| ||||    
T  39372663 tgttccagtacaaaaactaatggcctttatgtgctttaagctcaagaatgcgatat 39372608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 27349996 - 27349945
Alignment:
Q  18 aagaatacacttattctaattttat---accttgttttaagtgtaacacccc 66  Q
    ||||||||||||| |||||||||||   ||||||||||||||||||||||||    
T  27349996 aagaatacacttaatctaattttatccaaccttgttttaagtgtaacacccc 27349945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 39167420 - 39167373
Alignment:
Q  18 aagaatacacttattctaatt---ttataccttgttttaagtgtaaca 62  Q
    |||||||||||||||||||||   ||||||||||||||||||||||||    
T  39167420 aagaatacacttattctaattttattataccttgttttaagtgtaaca 39167373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 249 - 346
Target Start/End: Original strand, 39385895 - 39385992
Alignment:
Q  249 taagttagcacatttccattatggcatttgtttacaatagcttgttccagtccaaaatctaatagcctttatgtgcttttagctcaagaatgcaatat 346  Q
    ||||||||||| |||||||||   ||||| ||| || ||  |||||  ||| ||||| ||| | ||||||||||||||||||||||||||||| ||||    
T  39385895 taagttagcacgtttccattaccccatttctttgcattaagttgttttagtacaaaaactatttgcctttatgtgcttttagctcaagaatgcgatat 39385992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 44913809 - 44913863
Alignment:
Q  18 aagaatacacttattctaattttat---accttgttttaagtgtaacacccccac 69  Q
    ||||||||||||| |||||||||||   || ||||||||||||||||||||||||    
T  44913809 aagaatacacttaatctaattttatcatacattgttttaagtgtaacacccccac 44913863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 66
Target Start/End: Complemental strand, 4264136 - 4264083
Alignment:
Q  16 agaagaatacacttattctaatttta---taccttgttttaagtgtaacacccc 66  Q
    ||||||||||||||| ||||||||||   ||||||||||||||| |||||||||    
T  4264136 agaagaatacacttaatctaattttatcctaccttgttttaagtttaacacccc 4264083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 33660423 - 33660374
Alignment:
Q  20 gaatacacttattctaattttat---accttgttttaagtgtaacacccc 66  Q
    ||||||||||| |||||||||||   ||||||||||||||||||||||||    
T  33660423 gaatacacttaatctaattttatcctaccttgttttaagtgtaacacccc 33660374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 71 - 106
Target Start/End: Complemental strand, 39165051 - 39165016
Alignment:
Q  71 gtttgtatatgaaaacaattccacataataataaat 106  Q
    ||||||||||||||||| ||||||||||||||||||    
T  39165051 gtttgtatatgaaaacatttccacataataataaat 39165016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 7006978 - 7006930
Alignment:
Q  18 aagaatacacttattctaattttat---accttgttttaagtgtaacac 63  Q
    ||||||||||||| |||||||||||   |||||||||||||||||||||    
T  7006978 aagaatacacttaatctaattttatcataccttgttttaagtgtaacac 7006930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 66
Target Start/End: Original strand, 44286098 - 44286146
Alignment:
Q  21 aatacacttattctaattttat---accttgttttaagtgtaacacccc 66  Q
    |||||||||| |||||||||||   ||||||||||||||||||||||||    
T  44286098 aatacacttaatctaattttattctaccttgttttaagtgtaacacccc 44286146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 4167068 - 4167119
Alignment:
Q  18 aagaatacacttattctaattttat---accttgttttaagtgtaacacccc 66  Q
    ||||||||| ||| |||||||||||   ||||||||||||||||||||||||    
T  4167068 aagaatacatttaatctaattttatcctaccttgttttaagtgtaacacccc 4167119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 19313997 - 19314048
Alignment:
Q  18 aagaatacacttattctaatttta---taccttgttttaagtgtaacacccc 66  Q
    ||||||||||||| || |||||||   |||||||||||||||||||||||||    
T  19313997 aagaatacacttaatcgaattttaccctaccttgttttaagtgtaacacccc 19314048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 19424685 - 19424634
Alignment:
Q  18 aagaatacacttattctaattttat---accttgttttaagtgtaacacccc 66  Q
    |||||||| |||| |||||||||||   ||||||||||||||||||||||||    
T  19424685 aagaatacgcttaatctaattttatcttaccttgttttaagtgtaacacccc 19424634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 31570791 - 31570740
Alignment:
Q  18 aagaatacacttattctaattttat---accttgttttaagtgtaacacccc 66  Q
    ||||||||||||| |||||||||||   || |||||||||||||||||||||    
T  31570791 aagaatacacttaatctaattttatcttacattgttttaagtgtaacacccc 31570740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 29242190 - 29242144
Alignment:
Q  23 tacacttattctaattttat---accttgttttaagtgtaacacccc 66  Q
    |||||||| |||||||||||   ||||||||||||||||||||||||    
T  29242190 tacacttaatctaattttatcctaccttgttttaagtgtaacacccc 29242144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 65
Target Start/End: Complemental strand, 33709289 - 33709239
Alignment:
Q  18 aagaatacacttattctaattttat---accttgttttaagtgtaacaccc 65  Q
    |||||||| |||| |||||||||||   |||||||||||||||||||||||    
T  33709289 aagaatacgcttaatctaattttatcctaccttgttttaagtgtaacaccc 33709239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 114
Target Start/End: Original strand, 39203763 - 39203803
Alignment:
Q  74 tgtatatgaaaacaattccacataataataaatttaagcct 114  Q
    ||||||||| |||| ||||||||||||| ||||||||||||    
T  39203763 tgtatatgagaacatttccacataataacaaatttaagcct 39203803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 139 - 171
Target Start/End: Original strand, 39203835 - 39203867
Alignment:
Q  139 aaagccaagaaataaatgtaaccctgttaacta 171  Q
    |||||||||||||||| ||||||||||||||||    
T  39203835 aaagccaagaaataaaggtaaccctgttaacta 39203867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 341
Target Start/End: Complemental strand, 39217909 - 39217869
Alignment:
Q  301 caaaatctaatagcctttatgtgcttttagctcaagaatgc 341  Q
    ||||| ||||| |||||||||| ||||||||||||||||||    
T  39217909 caaaacctaattgcctttatgtccttttagctcaagaatgc 39217869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 249 - 341
Target Start/End: Complemental strand, 33563886 - 33563794
Alignment:
Q  249 taagttagcacatttccattatggcatttgtttacaatagcttgttccagtccaaaatctaatagcctttatgtgcttttagctcaagaatgc 341  Q
    ||||||||||| |||| ||||   ||||| |||||| ||| |||||||| ||||||| ||||| ||||||||||| ||||||| |||||||||    
T  33563886 taagttagcacgtttcgattaccccatttctttacattaggttgttccactccaaaaactaattgcctttatgtgattttagcacaagaatgc 33563794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 27330451 - 27330501
Alignment:
Q  19 agaatacacttattctaattttat---accttgttttaagtgtaacacccc 66  Q
    |||||||||||| |||||||||||   ||||||||||||||||||||||||    
T  27330451 agaatacacttaatctaattttattctaccttgttttaagtgtaacacccc 27330501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 6824508 - 6824457
Alignment:
Q  18 aagaatacacttattctaattttat---accttgttttaagtgtaacacccc 66  Q
    ||||||||||||| |||||||||||   |||||||||||| |||||||||||    
T  6824508 aagaatacacttaatctaattttatcataccttgttttaaatgtaacacccc 6824457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 22019778 - 22019829
Alignment:
Q  18 aagaatacacttattctaatttta---taccttgttttaagtgtaacacccc 66  Q
    ||||||||||||| ||||||||||   |||||| ||||||||||||||||||    
T  22019778 aagaatacacttaatctaattttatcctaccttattttaagtgtaacacccc 22019829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 32563295 - 32563342
Alignment:
Q  18 aagaatacacttattctaatttta---taccttgttttaagtgtaaca 62  Q
    ||||||||||||| ||||||||||   |||||||||||||||||||||    
T  32563295 aagaatacacttaatctaattttatcctaccttgttttaagtgtaaca 32563342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 36866908 - 36866959
Alignment:
Q  18 aagaatacacttattctaattttat---accttgttttaagtgtaacacccc 66  Q
    ||||||||| ||| |||||||||||   ||||||||||||||||||||||||    
T  36866908 aagaatacatttaatctaattttatcctaccttgttttaagtgtaacacccc 36866959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 39572965 - 39573012
Alignment:
Q  18 aagaatacacttattctaatttta---taccttgttttaagtgtaaca 62  Q
    ||||||||||||| ||||||||||   |||||||||||||||||||||    
T  39572965 aagaatacacttaatctaattttatcctaccttgttttaagtgtaaca 39573012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 40133531 - 40133582
Alignment:
Q  18 aagaatacacttattctaattttat---accttgttttaagtgtaacacccc 66  Q
    ||||||||| ||| |||||||||||   ||||||||||||||||||||||||    
T  40133531 aagaatacatttaatctaattttatcctaccttgttttaagtgtaacacccc 40133582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 65
Target Start/End: Complemental strand, 8741915 - 8741865
Alignment:
Q  18 aagaatacacttattctaatttt---ataccttgttttaagtgtaacaccc 65  Q
    ||||||||| ||| |||||||||   |||||||||||||||||||||||||    
T  8741915 aagaatacaattaatctaattttgtcataccttgttttaagtgtaacaccc 8741865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 12910506 - 12910552
Alignment:
Q  23 tacacttattctaattttat---accttgttttaagtgtaacacccc 66  Q
    |||||||| |||||||||||   ||||||||||||||||||||||||    
T  12910506 tacacttaatctaattttatcctaccttgttttaagtgtaacacccc 12910552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 34; Significance: 0.0000000005; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 5299991 - 5299940
Alignment:
Q  18 aagaatacacttattctaattttat---accttgttttaagtgtaacacccc 66  Q
    ||||||||||||| |||||||||||   ||||||||||||||||||||||||    
T  5299991 aagaatacacttaatctaattttatccaaccttgttttaagtgtaacacccc 5299940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 66
Target Start/End: Complemental strand, 36695013 - 36694960
Alignment:
Q  16 agaagaatacacttattctaatttta---taccttgttttaagtgtaacacccc 66  Q
    ||||||||||||||| ||||||||||   ||| |||||||||||||||||||||    
T  36695013 agaagaatacacttaatctaattttatcctacattgttttaagtgtaacacccc 36694960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 38644123 - 38644171
Alignment:
Q  18 aagaatacacttattctaattttat---accttgttttaagtgtaacac 63  Q
    ||||||||||||| |||||||||||   |||||||||||||||||||||    
T  38644123 aagaatacacttaatctaattttatcctaccttgttttaagtgtaacac 38644171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 465987 - 466038
Alignment:
Q  18 aagaatacacttattctaatttta---taccttgttttaagtgtaacacccc 66  Q
    ||||||||||||| ||||||||||   ||| |||||||||||||||||||||    
T  465987 aagaatacacttaatctaattttatcttacattgttttaagtgtaacacccc 466038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 9864293 - 9864344
Alignment:
Q  18 aagaatacacttattctaattttat---accttgttttaagtgtaacacccc 66  Q
    ||||||||||||| | |||||||||   ||||||||||||||||||||||||    
T  9864293 aagaatacacttaatataattttatcctaccttgttttaagtgtaacacccc 9864344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 41911033 - 41910982
Alignment:
Q  18 aagaatacacttattctaattttat---accttgttttaagtgtaacacccc 66  Q
    ||||||||| ||| |||||||||||   ||||||||||||||||||||||||    
T  41911033 aagaatacatttaatctaattttatcctaccttgttttaagtgtaacacccc 41910982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 34; Significance: 0.0000000005; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 12165873 - 12165924
Alignment:
Q  18 aagaatacacttattctaattttat---accttgttttaagtgtaacacccc 66  Q
    ||||||||||||| |||||||||||   ||||||||||||||||||||||||    
T  12165873 aagaatacacttaatctaattttattctaccttgttttaagtgtaacacccc 12165924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 21991757 - 21991808
Alignment:
Q  18 aagaatacacttattctaattttat---accttgttttaagtgtaacacccc 66  Q
    ||||||||||||| |||||||||||   ||||||||||||||||||||||||    
T  21991757 aagaatacacttaatctaattttatcctaccttgttttaagtgtaacacccc 21991808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 26588124 - 26588073
Alignment:
Q  18 aagaatacacttattctaattttat---accttgttttaagtgtaacacccc 66  Q
    ||||||||||||| |||||||||||   ||||||||||||||||||||||||    
T  26588124 aagaatacacttaatctaattttatcctaccttgttttaagtgtaacacccc 26588073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 15672802 - 15672754
Alignment:
Q  18 aagaatacacttattctaattttat---accttgttttaagtgtaacac 63  Q
    ||||||||||||| |||||||||||   |||||||||||||||||||||    
T  15672802 aagaatacacttaatctaattttatcctaccttgttttaagtgtaacac 15672754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 66
Target Start/End: Original strand, 22687363 - 22687411
Alignment:
Q  21 aatacacttattctaattttat---accttgttttaagtgtaacacccc 66  Q
    |||||||||| |||||||||||   ||||||||||||||||||||||||    
T  22687363 aatacacttaatctaattttatcctaccttgttttaagtgtaacacccc 22687411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 26980444 - 26980492
Alignment:
Q  18 aagaatacacttattctaattttat---accttgttttaagtgtaacac 63  Q
    ||||||||||||| |||||||||||   |||||||||||||||||||||    
T  26980444 aagaatacacttaatctaattttattctaccttgttttaagtgtaacac 26980492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 6546640 - 6546691
Alignment:
Q  18 aagaatacacttattctaattttat---accttgttttaagtgtaacacccc 66  Q
    ||||||||| ||| |||||||||||   ||||||||||||||||||||||||    
T  6546640 aagaatacatttaatctaattttatcctaccttgttttaagtgtaacacccc 6546691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 15612799 - 15612748
Alignment:
Q  18 aagaatacacttattctaattttat---accttgttttaagtgtaacacccc 66  Q
    ||||||||||||| | |||||||||   ||||||||||||||||||||||||    
T  15612799 aagaatacacttaatttaattttatcctaccttgttttaagtgtaacacccc 15612748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 43686161 - 43686212
Alignment:
Q  18 aagaatacacttattctaattttat---accttgttttaagtgtaacacccc 66  Q
    ||||||||| ||| |||||||||||   ||||||||||||||||||||||||    
T  43686161 aagaatacatttaatctaattttatcctaccttgttttaagtgtaacacccc 43686212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 44598787 - 44598838
Alignment:
Q  18 aagaatacacttattctaattttat---accttgttttaagtgtaacacccc 66  Q
    ||||||||| ||| |||||||||||   ||||||||||||||||||||||||    
T  44598787 aagaatacatttaatctaattttattctaccttgttttaagtgtaacacccc 44598838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 44413414 - 44413368
Alignment:
Q  23 tacacttattctaattttat---accttgttttaagtgtaacacccc 66  Q
    |||||||| |||||||||||   ||||||||||||||||||||||||    
T  44413414 tacacttaatctaattttatcataccttgttttaagtgtaacacccc 44413368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 34; Significance: 0.0000000005; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 23761218 - 23761266
Alignment:
Q  18 aagaatacacttattctaattttat--accttgttttaagtgtaacacc 64  Q
    ||||||||||||| |||||||||||  ||||||||||||||||||||||    
T  23761218 aagaatacacttaatctaattttatctaccttgttttaagtgtaacacc 23761266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 37775813 - 37775864
Alignment:
Q  18 aagaatacacttattctaattttat---accttgttttaagtgtaacacccc 66  Q
    ||||||||||||| |||||||||||   ||||||||||||||||||||||||    
T  37775813 aagaatacacttaatctaattttattctaccttgttttaagtgtaacacccc 37775864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 55241172 - 55241121
Alignment:
Q  16 agaagaatacacttattctaattttat---accttgttttaagtgtaacacc 64  Q
    ||||||||||||||| |||||||||||   ||||||||||||||||||||||    
T  55241172 agaagaatacacttaatctaattttatcataccttgttttaagtgtaacacc 55241121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 17272111 - 17272161
Alignment:
Q  19 agaatacacttattctaattttat---accttgttttaagtgtaacacccc 66  Q
    |||||||||||| |||||||||||   ||||||||||||||||||||||||    
T  17272111 agaatacacttaatctaattttattctaccttgttttaagtgtaacacccc 17272161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 66
Target Start/End: Original strand, 17167857 - 17167910
Alignment:
Q  16 agaagaatacacttattctaatttta---taccttgttttaagtgtaacacccc 66  Q
    ||||||||||||||| ||||||||||   ||| |||||||||||||||||||||    
T  17167857 agaagaatacacttaatctaattttatcctacattgttttaagtgtaacacccc 17167910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 66
Target Start/End: Original strand, 17173434 - 17173487
Alignment:
Q  16 agaagaatacacttattctaatttta---taccttgttttaagtgtaacacccc 66  Q
    ||||||||||||||| ||||||||||   ||| |||||||||||||||||||||    
T  17173434 agaagaatacacttaatctaattttatcctacattgttttaagtgtaacacccc 17173487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 7703655 - 7703703
Alignment:
Q  18 aagaatacacttattctaattttat---accttgttttaagtgtaacac 63  Q
    ||||||||||||| |||||||||||   |||||||||||||||||||||    
T  7703655 aagaatacacttaatctaattttattctaccttgttttaagtgtaacac 7703703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 30002697 - 30002646
Alignment:
Q  18 aagaatacacttattctaattttat---accttgttttaagtgtaacacccc 66  Q
    ||||||||||||| |||||||||||   ||||| ||||||||||||||||||    
T  30002697 aagaatacacttaatctaattttatcctaccttattttaagtgtaacacccc 30002646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 47253886 - 47253937
Alignment:
Q  18 aagaatacacttattctaattttat---accttgttttaagtgtaacacccc 66  Q
    ||||||||||||| | |||||||||   ||||||||||||||||||||||||    
T  47253886 aagaatacacttaatttaattttatcctaccttgttttaagtgtaacacccc 47253937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 66
Target Start/End: Complemental strand, 29584264 - 29584214
Alignment:
Q  19 agaatacacttattctaattttat---accttgttttaagtgtaacacccc 66  Q
    |||||||||||| |||||||||||   |||||||||||||||| |||||||    
T  29584264 agaatacacttaatctaattttattctaccttgttttaagtgttacacccc 29584214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 34; Significance: 0.0000000005; HSPs: 8)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 29163955 - 29164006
Alignment:
Q  18 aagaatacacttattctaattttat---accttgttttaagtgtaacacccc 66  Q
    ||||||||||||| |||||||||||   ||||||||||||||||||||||||    
T  29163955 aagaatacacttaatctaattttatcctaccttgttttaagtgtaacacccc 29164006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 33698290 - 33698341
Alignment:
Q  18 aagaatacacttattctaattttat---accttgttttaagtgtaacacccc 66  Q
    ||||||||||||| |||||||||||   ||||||||||||||||||||||||    
T  33698290 aagaatacacttaatctaattttatcctaccttgttttaagtgtaacacccc 33698341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 44891634 - 44891682
Alignment:
Q  18 aagaatacacttattctaattttat---accttgttttaagtgtaacac 63  Q
    ||||||||||||| |||||||||||   |||||||||||||||||||||    
T  44891634 aagaatacacttaatctaattttatcctaccttgttttaagtgtaacac 44891682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 11466961 - 11467012
Alignment:
Q  18 aagaatacacttattctaatttta---taccttgttttaagtgtaacacccc 66  Q
    ||||||||||||| ||||||||||   ||||||||||||||||||| |||||    
T  11466961 aagaatacacttaatctaattttatcctaccttgttttaagtgtaatacccc 11467012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 14586709 - 14586658
Alignment:
Q  18 aagaatacacttattctaattttat---accttgttttaagtgtaacacccc 66  Q
    ||||||||||||| ||||| |||||   ||||||||||||||||||||||||    
T  14586709 aagaatacacttaatctaactttatcctaccttgttttaagtgtaacacccc 14586658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 32373607 - 32373654
Alignment:
Q  18 aagaatacacttattctaatttta---taccttgttttaagtgtaaca 62  Q
    ||||||||||||| ||||||||||   |||||||||||||||||||||    
T  32373607 aagaatacacttaatctaattttatcctaccttgttttaagtgtaaca 32373654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 34133072 - 34133123
Alignment:
Q  18 aagaatacacttattctaattttat---accttgttttaagtgtaacacccc 66  Q
    ||||||||||||| | |||||||||   ||||||||||||||||||||||||    
T  34133072 aagaatacacttaatataattttatcctaccttgttttaagtgtaacacccc 34133123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 43348394 - 43348441
Alignment:
Q  18 aagaatacacttattctaatttta---taccttgttttaagtgtaaca 62  Q
    ||||||||||||| ||||||||||   |||||||||||||||||||||    
T  43348394 aagaatacacttaatctaattttatcctaccttgttttaagtgtaaca 43348441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 34; Significance: 0.0000000005; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 238547 - 238496
Alignment:
Q  18 aagaatacacttattctaattttat---accttgttttaagtgtaacacccc 66  Q
    ||||||||||||| |||||||||||   ||||||||||||||||||||||||    
T  238547 aagaatacacttaatctaattttattctaccttgttttaagtgtaacacccc 238496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 7079097 - 7079046
Alignment:
Q  18 aagaatacacttattctaattttat---accttgttttaagtgtaacacccc 66  Q
    ||||||||||||| |||||||||||   ||||||||||||||||||||||||    
T  7079097 aagaatacacttaatctaattttatcctaccttgttttaagtgtaacacccc 7079046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 10182042 - 10181991
Alignment:
Q  18 aagaatacacttattctaattttat---accttgttttaagtgtaacacccc 66  Q
    |||| |||||||| |||||||||||   ||||||||||||||||||||||||    
T  10182042 aagattacacttaatctaattttatcctaccttgttttaagtgtaacacccc 10181991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 11742385 - 11742338
Alignment:
Q  18 aagaatacacttattctaattttat---accttgttttaagtgtaaca 62  Q
    ||||||||||||| |||||||||||   ||||||||||||||||||||    
T  11742385 aagaatacacttaatctaattttatcttaccttgttttaagtgtaaca 11742338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 27227519 - 27227468
Alignment:
Q  18 aagaatacacttattctaattttat---accttgttttaagtgtaacacccc 66  Q
    |||| |||||||| |||||||||||   ||||||||||||||||||||||||    
T  27227519 aagattacacttaatctaattttatcctaccttgttttaagtgtaacacccc 27227468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 48620779 - 48620830
Alignment:
Q  18 aagaatacacttattctaatttta---taccttgttttaagtgtaacacccc 66  Q
    ||||||||||||| ||||||||||   ||| |||||||||||||||||||||    
T  48620779 aagaatacacttaatctaattttatcctactttgttttaagtgtaacacccc 48620830  T

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Target: scaffold0318 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 12055 - 12106
Alignment:
Q  18 aagaatacacttattctaattttatac---cttgttttaagtgtaacacccc 66  Q
    ||||||||||||| ||||||||||| |   ||||||||||||||||||||||    
T  12055 aagaatacacttaatctaattttatcctatcttgttttaagtgtaacacccc 12106  T

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Target: chr6 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 3879977 - 3879926
Alignment:
Q  18 aagaatacacttattctaattttat---accttgttttaagtgtaacacccc 66  Q
    ||||||| |||||||||||||||||   |||||||||||| |||||||||||    
T  3879977 aagaatatacttattctaattttatcctaccttgttttaaatgtaacacccc 3879926  T

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