View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20197_low_6 (Length: 475)

Name: NF20197_low_6
Description: NF20197
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20197_low_6
NF20197_low_6
[»] chr4 (46 HSPs)
chr4 (106-363)||(51744519-51744779)
chr4 (103-246)||(39788153-39788296)
chr4 (104-246)||(40071447-40071589)
chr4 (106-245)||(17493914-17494053)
chr4 (104-246)||(54438155-54438297)
chr4 (103-246)||(34408654-34408797)
chr4 (103-246)||(37064750-37064893)
chr4 (109-246)||(33800786-33800923)
chr4 (103-246)||(47199646-47199789)
chr4 (106-246)||(20789833-20789972)
chr4 (106-246)||(925136-925276)
chr4 (244-363)||(40071622-40071744)
chr4 (244-363)||(54438330-54438452)
chr4 (249-363)||(34408835-34408952)
chr4 (249-363)||(37064931-37065048)
chr4 (244-360)||(925309-925428)
chr4 (244-363)||(17493758-17493880)
chr4 (106-246)||(32217937-32218077)
chr4 (244-337)||(20789707-20789800)
chr4 (244-363)||(39787997-39788120)
chr4 (249-336)||(3172197-3172284)
chr4 (106-246)||(21240486-21240626)
chr4 (244-361)||(47199493-47199613)
chr4 (244-336)||(21240361-21240453)
chr4 (244-341)||(46870637-46870734)
chr4 (106-222)||(10441517-10441631)
chr4 (116-248)||(52101206-52101338)
chr4 (256-337)||(33800967-33801048)
chr4 (252-341)||(53509823-53509912)
chr4 (250-336)||(32218116-32218202)
chr4 (164-246)||(53509700-53509782)
chr4 (250-311)||(52101108-52101169)
chr4 (168-246)||(28910220-28910296)
chr4 (250-336)||(28910335-28910421)
chr4 (280-363)||(10441148-10441235)
chr4 (107-156)||(28689666-28689715)
chr4 (249-336)||(41555497-41555584)
chr4 (105-139)||(17493752-17493786)
chr4 (106-139)||(10441143-10441176)
chr4 (106-139)||(34408924-34408957)
chr4 (106-139)||(40071716-40071749)
chr4 (171-251)||(46870762-46870840)
chr4 (106-139)||(54438424-54438457)
chr4 (104-139)||(925403-925438)
chr4 (106-139)||(51744751-51744784)
chr4 (106-142)||(10385073-10385109)
[»] chr5 (19 HSPs)
chr5 (106-246)||(42897374-42897514)
chr5 (106-246)||(36982346-36982486)
chr5 (106-246)||(14044216-14044355)
chr5 (244-363)||(36982191-36982313)
chr5 (244-337)||(42897547-42897640)
chr5 (244-363)||(14044061-14044183)
chr5 (106-246)||(36767876-36768014)
chr5 (249-336)||(2970842-2970929)
chr5 (106-222)||(5712600-5712716)
chr5 (106-246)||(2970666-2970805)
chr5 (120-226)||(33404409-33404515)
chr5 (103-139)||(14044053-14044089)
chr5 (104-139)||(36982184-36982219)
chr5 (280-363)||(33403199-33403285)
chr5 (106-138)||(36768857-36768889)
chr5 (106-141)||(5213148-5213183)
chr5 (106-141)||(37304371-37304406)
chr5 (105-139)||(33403193-33403227)
chr5 (100-132)||(1780942-1780974)
[»] chr3 (32 HSPs)
chr3 (106-246)||(40496933-40497073)
chr3 (104-246)||(51545822-51545964)
chr3 (106-246)||(48169884-48170024)
chr3 (106-246)||(13542792-13542932)
chr3 (106-246)||(41346207-41346347)
chr3 (106-245)||(54014398-54014537)
chr3 (106-246)||(50676634-50676773)
chr3 (133-246)||(24709170-24709283)
chr3 (244-372)||(41346042-41346174)
chr3 (244-363)||(54014242-54014364)
chr3 (244-363)||(12568181-12568303)
chr3 (244-363)||(13544645-13544767)
chr3 (244-363)||(51545667-51545789)
chr3 (249-363)||(50676480-50676597)
chr3 (244-363)||(40496778-40496900)
chr3 (249-359)||(24709019-24709132)
chr3 (108-246)||(48737686-48737824)
chr3 (244-363)||(48169729-48169851)
chr3 (106-226)||(30462848-30462967)
chr3 (244-336)||(48737561-48737653)
chr3 (280-363)||(30459811-30459897)
chr3 (103-139)||(54014234-54014270)
chr3 (106-139)||(30459806-30459839)
chr3 (106-139)||(41346047-41346080)
chr3 (106-139)||(50676475-50676508)
chr3 (104-139)||(12568275-12568310)
chr3 (104-139)||(13544739-13544774)
chr3 (106-141)||(34827322-34827357)
chr3 (106-141)||(38492052-38492087)
chr3 (104-139)||(51545660-51545695)
chr3 (106-139)||(40496773-40496806)
chr3 (106-139)||(48169724-48169757)
[»] chr2 (36 HSPs)
chr2 (106-246)||(29194148-29194288)
chr2 (105-246)||(2110380-2110521)
chr2 (101-246)||(43370834-43370979)
chr2 (106-246)||(28585683-28585823)
chr2 (106-246)||(8381316-8381456)
chr2 (106-246)||(45080420-45080558)
chr2 (111-246)||(4828094-4828229)
chr2 (244-363)||(45080591-45080713)
chr2 (244-363)||(2110225-2110347)
chr2 (244-363)||(4828262-4828384)
chr2 (244-363)||(28585856-28585978)
chr2 (244-363)||(43370679-43370801)
chr2 (249-337)||(8381494-8381582)
chr2 (249-363)||(29193993-29194110)
chr2 (106-210)||(30422588-30422692)
chr2 (101-226)||(31921616-31921741)
chr2 (107-246)||(1779073-1779212)
chr2 (130-246)||(9370534-9370650)
chr2 (244-335)||(16964852-16964943)
chr2 (249-336)||(39646504-39646591)
chr2 (244-334)||(1779245-1779335)
chr2 (102-221)||(25898766-25898884)
chr2 (252-336)||(42847088-42847172)
chr2 (280-362)||(31922048-31922133)
chr2 (106-246)||(43377208-43377346)
chr2 (165-226)||(39646365-39646426)
chr2 (102-139)||(43370670-43370707)
chr2 (105-139)||(2110219-2110253)
chr2 (105-139)||(25898462-25898496)
chr2 (129-246)||(16970316-16970431)
chr2 (106-139)||(29193988-29194021)
chr2 (106-139)||(45080685-45080718)
chr2 (264-363)||(25898468-25898570)
chr2 (106-141)||(7443117-7443152)
chr2 (108-139)||(28585950-28585981)
chr2 (100-140)||(20917723-20917763)
[»] chr8 (27 HSPs)
chr8 (106-246)||(18575188-18575328)
chr8 (103-246)||(11254660-11254803)
chr8 (106-246)||(17493686-17493826)
chr8 (106-246)||(27820933-27821073)
chr8 (109-246)||(38069898-38070035)
chr8 (105-246)||(39907068-39907209)
chr8 (106-246)||(12738366-12738506)
chr8 (244-363)||(27820778-27820900)
chr8 (244-364)||(17493530-17493653)
chr8 (249-364)||(39906915-39907032)
chr8 (244-363)||(11254505-11254627)
chr8 (244-363)||(38070068-38070190)
chr8 (106-226)||(11147829-11147949)
chr8 (250-336)||(17336149-17336235)
chr8 (165-246)||(17336029-17336110)
chr8 (244-363)||(18575033-18575155)
chr8 (249-341)||(9753800-9753892)
chr8 (105-246)||(9753930-9754070)
chr8 (249-336)||(13243724-13243811)
chr8 (252-336)||(12738547-12738631)
chr8 (105-139)||(18575027-18575061)
chr8 (106-139)||(11254500-11254533)
chr8 (105-139)||(38070162-38070196)
chr8 (134-246)||(13243575-13243686)
chr8 (106-139)||(17493526-17493559)
chr8 (106-139)||(27820773-27820806)
chr8 (105-141)||(1580991-1581027)
[»] chr1 (34 HSPs)
chr1 (106-246)||(50777157-50777297)
chr1 (103-246)||(1929214-1929357)
chr1 (106-246)||(46862716-46862856)
chr1 (109-246)||(39150900-39151037)
chr1 (17-107)||(37526295-37526385)
chr1 (106-246)||(38321805-38321941)
chr1 (110-233)||(46371094-46371217)
chr1 (106-246)||(28036700-28036841)
chr1 (106-246)||(32045993-32046133)
chr1 (368-454)||(37526188-37526274)
chr1 (244-363)||(1929389-1929511)
chr1 (106-246)||(1207452-1207592)
chr1 (249-363)||(46370932-46371049)
chr1 (108-246)||(8229223-8229362)
chr1 (249-362)||(39151075-39151191)
chr1 (244-363)||(28036874-28036996)
chr1 (106-246)||(40562436-40562574)
chr1 (244-363)||(46862561-46862683)
chr1 (244-363)||(32045838-32045960)
chr1 (244-359)||(50777006-50777124)
chr1 (244-363)||(38321650-38321772)
chr1 (244-363)||(8229068-8229190)
chr1 (244-336)||(38817809-38817901)
chr1 (244-336)||(40562607-40562699)
chr1 (256-336)||(1207636-1207715)
chr1 (102-139)||(46370923-46370960)
chr1 (103-139)||(46862553-46862589)
chr1 (106-138)||(8229063-8229095)
chr1 (244-336)||(9129575-9129667)
chr1 (106-139)||(1929483-1929516)
chr1 (106-246)||(9129401-9129542)
chr1 (106-139)||(32045833-32045866)
chr1 (106-139)||(38321645-38321678)
chr1 (106-139)||(39151164-39151197)
[»] scaffold0519 (3 HSPs)
scaffold0519 (103-246)||(10590-10733)
scaffold0519 (244-363)||(10766-10888)
scaffold0519 (106-139)||(10860-10893)
[»] chr6 (28 HSPs)
chr6 (101-246)||(28541582-28541727)
chr6 (106-246)||(12350432-12350572)
chr6 (105-246)||(16435939-16436076)
chr6 (115-246)||(29182751-29182882)
chr6 (250-364)||(16435783-16435900)
chr6 (105-246)||(30736579-30736720)
chr6 (106-246)||(1241269-1241408)
chr6 (249-363)||(13041977-13042094)
chr6 (100-246)||(31013489-31013635)
chr6 (244-363)||(1241114-1241236)
chr6 (249-364)||(12350276-12350394)
chr6 (108-246)||(13042132-13042268)
chr6 (244-363)||(28541760-28541882)
chr6 (137-246)||(7271109-7271218)
chr6 (249-363)||(29182596-29182713)
chr6 (253-336)||(30736454-30736537)
chr6 (244-336)||(7271251-7271343)
chr6 (252-336)||(1870569-1870653)
chr6 (244-325)||(13210390-13210471)
chr6 (251-336)||(31013675-31013760)
chr6 (253-336)||(31833747-31833830)
chr6 (137-244)||(13210506-13210610)
chr6 (167-246)||(1870694-1870771)
chr6 (106-141)||(18991904-18991939)
chr6 (104-142)||(2913122-2913160)
chr6 (106-139)||(1241109-1241142)
chr6 (106-139)||(13041972-13042005)
chr6 (106-139)||(29182591-29182624)
[»] chr7 (36 HSPs)
chr7 (106-246)||(40232115-40232255)
chr7 (104-246)||(4041107-4041249)
chr7 (105-246)||(27596085-27596226)
chr7 (106-246)||(6392431-6392571)
chr7 (114-240)||(31689361-31689487)
chr7 (106-246)||(25943649-25943787)
chr7 (117-246)||(29737565-29737694)
chr7 (244-363)||(40232288-40232410)
chr7 (105-246)||(41427647-41427788)
chr7 (249-363)||(27596263-27596380)
chr7 (244-363)||(29737410-29737532)
chr7 (244-337)||(24300317-24300410)
chr7 (244-363)||(41427821-41427943)
chr7 (257-363)||(25943831-25943940)
chr7 (244-337)||(6392305-6392398)
chr7 (244-363)||(4040952-4041074)
chr7 (249-359)||(31689531-31689644)
chr7 (106-226)||(22338148-22338268)
chr7 (249-336)||(38276723-38276810)
chr7 (244-336)||(21442971-21443063)
chr7 (166-246)||(38276605-38276685)
chr7 (123-212)||(24300171-24300260)
chr7 (244-336)||(48838095-48838187)
chr7 (115-226)||(22619930-22620041)
chr7 (112-248)||(21442806-21442940)
chr7 (106-139)||(22337710-22337743)
chr7 (106-139)||(27596352-27596385)
chr7 (106-139)||(29737405-29737438)
chr7 (108-139)||(25943912-25943943)
chr7 (105-139)||(4040946-4040980)
chr7 (106-156)||(7380535-7380585)
chr7 (280-363)||(22337715-22337802)
chr7 (106-139)||(22619524-22619557)
chr7 (106-139)||(31689620-31689653)
chr7 (106-139)||(40232382-40232415)
chr7 (103-139)||(24300411-24300447)
[»] scaffold0016 (2 HSPs)
scaffold0016 (106-246)||(92169-92309)
scaffold0016 (103-139)||(92387-92423)
[»] scaffold0061 (2 HSPs)
scaffold0061 (106-246)||(10017-10157)
scaffold0061 (244-337)||(10190-10283)
[»] scaffold0047 (3 HSPs)
scaffold0047 (106-246)||(69913-70053)
scaffold0047 (252-363)||(69758-69872)
scaffold0047 (106-139)||(69753-69786)
[»] scaffold0318 (3 HSPs)
scaffold0318 (244-363)||(16362-16484)
scaffold0318 (109-246)||(16517-16641)
scaffold0318 (106-139)||(16357-16390)
[»] scaffold0532 (2 HSPs)
scaffold0532 (106-246)||(3974-4114)
scaffold0532 (249-337)||(3848-3936)
[»] scaffold1194 (2 HSPs)
scaffold1194 (244-336)||(1014-1106)
scaffold1194 (105-246)||(1130-1268)
[»] scaffold0459 (1 HSPs)
scaffold0459 (101-141)||(12747-12787)
[»] scaffold0366 (2 HSPs)
scaffold0366 (101-141)||(10388-10428)
scaffold0366 (101-141)||(14054-14094)


Alignment Details
Target: chr4 (Bit Score: 182; Significance: 3e-98; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 106 - 363
Target Start/End: Original strand, 51744519 - 51744779
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgagtta 205  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||       |||||||||||  ||||||||||||||||||||||| ||||     
T  51744519 tactctctccgtccctgaataagtgacctatttgaccatttcacacagattaagaaaagtgtaaagatgtgagaaagagagtgatacttttactaagttg 51744618  T
Q  206 cccttgtcattattttgaaactttttcacttttaagtaatggtgaccacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgag 305  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| | |||||||||||||||||| ||||||||||||||    
T  51744619 cccttgtcattattttgaaacttgttcacttttaagtaatggggaccacaaaaagtatttataaggggtaaatctgtcaaattttgcttagaaatttgag 51744718  T
Q  306 aaggtcaagtattgtgggacaaatattttttataaa---gtcacttatttagggacggagg 363  Q
    |||||||||||||||||||||||||||||||| |||   ||||||||||||||||||||||    
T  51744719 aaggtcaagtattgtgggacaaatattttttacaaataggtcacttatttagggacggagg 51744779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 103 - 246
Target Start/End: Complemental strand, 39788296 - 39788153
Alignment:
Q  103 tattactccctccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgag 202  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||    
T  39788296 tattactcccttcgtccctgaataagtgacctatttgaccatttcacacagattaagaaaagtgtaaagatgaaagaaagagagtgatacttttactgag 39788197  T
Q  203 ttacccttgtcattattttgaaactttttcacttttaagtaatg 246  Q
    || |||||||||||||||||||||||||||||||||||||||||    
T  39788196 ttgcccttgtcattattttgaaactttttcacttttaagtaatg 39788153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 104 - 246
Target Start/End: Original strand, 40071447 - 40071589
Alignment:
Q  104 attactccctccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgagt 203  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||    
T  40071447 attactccctccgtcccttaataagtgacctatttgaccatttcacacagattaagaaaagtgtaaagatgaaagaaagagagtgatacttttactgagt 40071546  T
Q  204 tacccttgtcattattttgaaactttttcacttttaagtaatg 246  Q
    | |||||||||||||||||||||||||||||||||||| ||||    
T  40071547 tgcccttgtcattattttgaaactttttcacttttaagcaatg 40071589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 106 - 245
Target Start/End: Complemental strand, 17494053 - 17493914
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgagtta 205  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||| ||||||     
T  17494053 tactccctccgtcccttaataagtgacctatttgaccatttcacacagattaagaaaagtgtaaagatgaaagaaagagagtgatacttttattgagttg 17493954  T
Q  206 cccttgtcattattttgaaactttttcacttttaagtaat 245  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  17493953 cccttgtcattattttgaaactttttcacttttaagtaat 17493914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 104 - 246
Target Start/End: Original strand, 54438155 - 54438297
Alignment:
Q  104 attactccctccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgagt 203  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| ||||       ||||||||||||||||||||||||||||||||||||||||    
T  54438155 attactccctccgtccctaaataagtgacctatttgaccatttcacaccgattaagaaaagtgtaaagatgaaagaaagagagtgatacttttactgagt 54438254  T
Q  204 tacccttgtcattattttgaaactttttcacttttaagtaatg 246  Q
    | |||||||||||||||| ||||||||||||||||||||||||    
T  54438255 tgcccttgtcattattttaaaactttttcacttttaagtaatg 54438297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 103 - 246
Target Start/End: Original strand, 34408654 - 34408797
Alignment:
Q  103 tattactccctccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgag 202  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| |||       |||||||||||||||||||||| ||||||||||| ||||    
T  34408654 tattactccctccgtccctgaataagtgacctatttggccatttcacacatattaggaaaagtgtaaagatgaaagaaagagaatgatacttttattgag 34408753  T
Q  203 ttacccttgtcattattttgaaactttttcacttttaagtaatg 246  Q
    || |||||||||||||||||||||||||||||||||||||||||    
T  34408754 ttgcccttgtcattattttgaaactttttcacttttaagtaatg 34408797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 103 - 246
Target Start/End: Original strand, 37064750 - 37064893
Alignment:
Q  103 tattactccctccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgag 202  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||| |||||       |||||||||||||||||||||||||||||||||||||||    
T  37064750 tattactccatccgtccctgaataagtgacctatttgatcatttcacatagattaagaaaagtgtaaagatgaaagaaagagagtgatacttttactgag 37064849  T
Q  203 ttacccttgtcattattttgaaactttttcacttttaagtaatg 246  Q
    || ||||||||||| |||||||||||||||||||||||||||||    
T  37064850 ttgcccttgtcatttttttgaaactttttcacttttaagtaatg 37064893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 109 - 246
Target Start/End: Original strand, 33800786 - 33800923
Alignment:
Q  109 tccctccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgagttaccc 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||| ||||||||||||||||||||||||||||| |||    
T  33800786 tccctccgtccctgaataagtgacctatttgaccatttcacacagattcagaaaagtgtaaagatggaagaaagagagtgatacttttactgagttgccc 33800885  T
Q  209 ttgtcattattttgaaactttttcacttttaagtaatg 246  Q
    ||||||| |||||||||||||||||||||||| |||||    
T  33800886 ttgtcatcattttgaaactttttcacttttaaataatg 33800923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 103 - 246
Target Start/End: Complemental strand, 47199789 - 47199646
Alignment:
Q  103 tattactccctccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgag 202  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||       |||||||||||||||||||||||||||| ||||| ||||    
T  47199789 tattactccctccgtacctgaataagtgatctatttgaccatttcacacagattaagaaaagtgtaaagatgaaagaaagagagtgatatttttattgag 47199690  T
Q  203 ttacccttgtcattattttgaaactttttcacttttaagtaatg 246  Q
    || |||||||||||||||| ||||||||||||||||||||||||    
T  47199689 ttgcccttgtcattattttaaaactttttcacttttaagtaatg 47199646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 106 - 246
Target Start/End: Complemental strand, 20789972 - 20789833
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgagtta 205  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||| |     
T  20789972 tactccctccgttcctgaataagtgatctatttgaccatttcacacagattaagaaaagtgtaaagatgaaagaaagagagtgatacttttactgagct- 20789874  T
Q  206 cccttgtcattattttgaaactttttcacttttaagtaatg 246  Q
     ||||||||||||||||||||||||||||||||||||||||    
T  20789873 gccttgtcattattttgaaactttttcacttttaagtaatg 20789833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 106 - 246
Target Start/End: Original strand, 925136 - 925276
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgagtta 205  Q
    |||||||||||||||| |||||||||| ||||||| |||||||||||||||       |||||||||| ||||||| | ||||||||||||||||||||     
T  925136 tactccctccgtcccttaataagtgacttatttgatcatttcacacagattaagaaaagtgtaaagataaaagaaataaagtgatacttttactgagttg 925235  T
Q  206 cccttgtcattattttgaaactttttcacttttaagtaatg 246  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  925236 cccttgtcattattttgaaactttttcacttttaagtaatg 925276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 244 - 363
Target Start/End: Original strand, 40071622 - 40071744
Alignment:
Q  244 atggtgaccacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatattttttataaa-- 341  Q
    |||| ||||||||||||||||||||| | |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| |||      
T  40071622 atggggaccacaaaaagtatttataaggggtaaatctgtcaaattttgcttagaaatctgagaaggtcaagtattgtgggacaaatattttttacaaata 40071721  T
Q  342 -gtcacttatttagggacggagg 363  Q
     |||||||||| |||||||||||    
T  40071722 ggtcacttattcagggacggagg 40071744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 244 - 363
Target Start/End: Original strand, 54438330 - 54438452
Alignment:
Q  244 atggtgaccacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatattttttataaa-- 341  Q
    |||| ||||||||||||||||||||| | |||||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||||| |||      
T  54438330 atggggaccacaaaaagtatttataaggggtaaatctgtcaaattttgcttagaaatctgagaagatcaagtattgtgggacaaatattttttacaaata 54438429  T
Q  342 -gtcacttatttagggacggagg 363  Q
     |||||||||| |||||||||||    
T  54438430 ggtcacttattcagggacggagg 54438452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 249 - 363
Target Start/End: Original strand, 34408835 - 34408952
Alignment:
Q  249 gaccacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatattttttataaa---gtca 345  Q
    ||||||||||||||||||||| | |||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||| |||   ||||    
T  34408835 gaccacaaaaagtatttataaggggtaaatctgtcaaattttacctagaaatctgagaaggtcaagtattatgggacaaatattttttacaaataggtca 34408934  T
Q  346 cttatttagggacggagg 363  Q
    |||||| |||||||||||    
T  34408935 cttattcagggacggagg 34408952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 249 - 363
Target Start/End: Original strand, 37064931 - 37065048
Alignment:
Q  249 gaccacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatattttttata---aagtca 345  Q
    ||||||||||||||||||||| | |||||| ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| |   ||||||    
T  37064931 gaccacaaaaagtatttataaggggtaaatatgtcaaattttgcttagaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataagtca 37065030  T
Q  346 cttatttagggacggagg 363  Q
    |||||| |||||||||||    
T  37065031 cttattcagggacggagg 37065048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 244 - 360
Target Start/End: Original strand, 925309 - 925428
Alignment:
Q  244 atggtgaccacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatattttttataaa-- 341  Q
    |||| ||||||||||||||||||||| | |||||||||||||||||| ||||||||| ||||||||||||||||||| ||| |||||||||||| |||      
T  925309 atggggaccacaaaaagtatttataaggggtaaatctgtcaaattttgcttagaaatctgagaaggtcaagtattgtaggataaatattttttacaaata 925408  T
Q  342 -gtcacttatttagggacgg 360  Q
     |||||||||| ||||||||    
T  925409 ggtcacttattcagggacgg 925428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 244 - 363
Target Start/End: Complemental strand, 17493880 - 17493758
Alignment:
Q  244 atggtgaccacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatattttttataaa-- 341  Q
    |||| ||||||||||||| ||||||| | |||||||||||||||||| ||||||||| ||||||| |||||||||||| ||||||||||||||| |||      
T  17493880 atggggaccacaaaaagtttttataaggggtaaatctgtcaaattttgcttagaaatctgagaagatcaagtattgtgagacaaatattttttacaaata 17493781  T
Q  342 -gtcacttatttagggacggagg 363  Q
     |||||||||| |||||||||||    
T  17493780 ggtcacttattcagggacggagg 17493758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 106 - 246
Target Start/End: Original strand, 32217937 - 32218077
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgagtta 205  Q
    ||||||| |||||||| ||||  | ||||| ||||||||||||||||||||       |||||||||||||||||||||| | ||| ||||||||| |      
T  32217937 tactcccaccgtccctcaatactttacctacttgaccatttcacacagattaagaagagtgtaaagatgaaagaaagagaattatatttttactgaatag 32218036  T
Q  206 cccttgtcattattttgaaactttttcacttttaagtaatg 246  Q
     ||||||||||||||||||||||||||||||||||||||||    
T  32218037 tccttgtcattattttgaaactttttcacttttaagtaatg 32218077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 244 - 337
Target Start/End: Complemental strand, 20789800 - 20789707
Alignment:
Q  244 atggtgaccacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatatttttta 337  Q
    |||| ||||||||||||||||||||| |  ||||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||    
T  20789800 atggggaccacaaaaagtatttataagggataaatctgtcaaattttacttagaaatctgagaagatcaagtattatgggacaaatatttttta 20789707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 244 - 363
Target Start/End: Complemental strand, 39788120 - 39787997
Alignment:
Q  244 atggtgaccacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatatttttt-ataaa- 341  Q
    |||| ||||||||||||||||||||| | |||||||||||||||||| ||||||||| ||| ||||||||||||||||| ||||||||||||| | |||     
T  39788120 atggggaccacaaaaagtatttataaggggtaaatctgtcaaattttgcttagaaatctgataaggtcaagtattgtggaacaaatatttttttacaaat 39788021  T
Q  342 --gtcacttatttagggacggagg 363  Q
      ||||||||||||| ||||||||    
T  39788020 aggtcacttatttagagacggagg 39787997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 249 - 336
Target Start/End: Original strand, 3172197 - 3172284
Alignment:
Q  249 gaccacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatatttttt 336  Q
    ||||||||||||||||||||||  |||||| ||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||    
T  3172197 gaccacaaaaagtatttataaaaggtaaatttgtcaaattctgcttagaaatttgagaaagtcaagtattgtgggacaaatatttttt 3172284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 106 - 246
Target Start/End: Complemental strand, 21240626 - 21240486
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgagtta 205  Q
    ||||||||||||||||  |||  ||||||| ||||||||||||||||||||       ||||| |||||||||||||||| ||||| ||||||||| ||     
T  21240626 tactccctccgtccctcgatacttgacctacttgaccatttcacacagattaagaaaagtgtagagatgaaagaaagagaatgatatttttactgaattg 21240527  T
Q  206 cccttgtcattattttgaaactttttcacttttaagtaatg 246  Q
     | |||||| |||||||||||||||||| ||||||||||||    
T  21240526 acattgtcactattttgaaactttttcatttttaagtaatg 21240486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 244 - 361
Target Start/End: Complemental strand, 47199613 - 47199493
Alignment:
Q  244 atggtgaccacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatattttttataaa-- 341  Q
    |||| ||||||||||||||||||||  | |||||||||| ||||||| | ||||||| |||||||||||||||||||||||||||||||||||| |||      
T  47199613 atggggaccacaaaaagtatttatatggggtaaatctgttaaattttgcctagaaatctgagaaggtcaagtattgtgggacaaatattttttacaaata 47199514  T
Q  342 -gtcacttatttagggacgga 361  Q
     |||||||||| | |||||||    
T  47199513 ggtcacttattcacggacgga 47199493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 244 - 336
Target Start/End: Complemental strand, 21240453 - 21240361
Alignment:
Q  244 atggtgaccacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatatttttt 336  Q
    |||| ||||||||||||||||||||  | |||||||||||||||| ||||||||| | ||||||||||||||||| |||||||||||||||||    
T  21240453 atggggaccacaaaaagtatttatatggggtaaatctgtcaaattctacttagaagtctgagaaggtcaagtattatgggacaaatatttttt 21240361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 244 - 341
Target Start/End: Complemental strand, 46870734 - 46870637
Alignment:
Q  244 atggtgaccacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatattttttataaa 341  Q
    |||| ||||||||||||||||||||| |  ||||| ||||||||| |||||| |||| |||| |||||||||||||||||||||||||||||| ||||    
T  46870734 atggggaccacaaaaagtatttataagggataaatttgtcaaattgtacttaaaaatctgagcaggtcaagtattgtgggacaaatattttttctaaa 46870637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 106 - 222
Target Start/End: Complemental strand, 10441631 - 10441517
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgagtta 205  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||       |||||||||| ||||||  ||||||||| ||||||||| ||     
T  10441631 tactccctccgtccctgaataagtgacctacttgaccatttcacacagattaagataagtgtaaagataaaagaa--agagtgatatttttactgaattg 10441534  T
Q  206 cccttgtcattattttg 222  Q
    ||||| | |||||||||    
T  10441533 cccttattattattttg 10441517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 116 - 248
Target Start/End: Complemental strand, 52101338 - 52101206
Alignment:
Q  116 gtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgagttacccttgtcat 215  Q
    |||||| ||||  ||||| | ||||| ||||||||||||||       |||||||||||||||||| | | ||||| ||||||||| || | ||||||||    
T  52101338 gtccctcaatacttgaccaacttgactatttcacacagattaagaaaagtgtaaagatgaaagaaatataatgatatttttactgaattgcacttgtcat 52101239  T
Q  216 tattttgaaactttttcacttttaagtaatggt 248  Q
    |||||||||| ||||||||||||||||||||||    
T  52101238 tattttgaaattttttcacttttaagtaatggt 52101206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 256 - 337
Target Start/End: Original strand, 33800967 - 33801048
Alignment:
Q  256 aaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatatttttta 337  Q
    ||||||||||||||   |||||||||||||||||||||||||||| ||||||||||||||||| | | ||||||||||||||    
T  33800967 aaaagtatttataagaggtaaatctgtcaaattttacttagaaatctgagaaggtcaagtattatagaacaaatatttttta 33801048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 252 - 341
Target Start/End: Original strand, 53509823 - 53509912
Alignment:
Q  252 cacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatattttttataaa 341  Q
    |||||||||||||||||| || ||||| ||||||||| | ||||||||| ||| |||||||| |||||||| ||||||||||||| ||||    
T  53509823 cacaaaaagtatttataaggaataaatatgtcaaattctccttagaaatctgataaggtcaaatattgtggaacaaatattttttctaaa 53509912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 250 - 336
Target Start/End: Original strand, 32218116 - 32218202
Alignment:
Q  250 accacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatatttttt 336  Q
    |||||||||||||||||||| | |||||||||||||||| | |||| |||| ||||||  ||||||||| | |||||||||||||||    
T  32218116 accacaaaaagtatttataaggggtaaatctgtcaaattctgcttaaaaatctgagaaaatcaagtattataggacaaatatttttt 32218202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 164 - 246
Target Start/End: Original strand, 53509700 - 53509782
Alignment:
Q  164 gtgtaaagatgaaagaaagagagtgatacttttactgagttacccttgtcattattttgaaactttttcacttttaagtaatg 246  Q
    |||||||||||||||||| ||| ||||| | ||||||| ||  | |||||||||||||||||||||||||||||||| |||||    
T  53509700 gtgtaaagatgaaagaaaaagaatgatattgttactgaattgtcattgtcattattttgaaactttttcacttttaaataatg 53509782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 250 - 311
Target Start/End: Complemental strand, 52101169 - 52101108
Alignment:
Q  250 accacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtc 311  Q
    |||||||||||||||||||||| |||||||||||||||||| |||| |||| ||||||||||    
T  52101169 accacaaaaagtatttataaagggtaaatctgtcaaattttgcttataaatctgagaaggtc 52101108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 168 - 246
Target Start/End: Original strand, 28910220 - 28910296
Alignment:
Q  168 aaagatgaaagaaagagagtgatacttttactgagttacccttgtcattattttgaaactttttcacttttaagtaatg 246  Q
    |||||||||||||||||| ||||| ||||||||| ||  |||||| |||||||||||||   |||||||||||||||||    
T  28910220 aaagatgaaagaaagagaatgatatttttactgaattgtccttgttattattttgaaac--cttcacttttaagtaatg 28910296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 250 - 336
Target Start/End: Original strand, 28910335 - 28910421
Alignment:
Q  250 accacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatatttttt 336  Q
    |||||||||||||||||||| | |||||| ||||||||| | |||| |||| ||||||||| || || ||| | |||||||||||||    
T  28910335 accacaaaaagtatttataaggggtaaatttgtcaaattctgcttaaaaatctgagaaggttaaatactgtagaacaaatatttttt 28910421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 280 - 363
Target Start/End: Complemental strand, 10441235 - 10441148
Alignment:
Q  280 tgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatatttttt-ataaa---gtcacttatttagggacggagg 363  Q
    ||||||||||| |||  |||||||||||||||||||||| |||||||||| |||||| | |||   |||||||||| |||||||||||    
T  10441235 tgtcaaattttgctttaaaatttgagaaggtcaagtattttgggacaaatttttttttacaaataggtcacttattcagggacggagg 10441148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 107 - 156
Target Start/End: Original strand, 28689666 - 28689715
Alignment:
Q  107 actccctccgtccctgaataagtgacctatttgaccatttcacacagatt 156  Q
    |||||||| |||||||||||||||| ||||||||| ||||||||||||||    
T  28689666 actccctctgtccctgaataagtgatctatttgactatttcacacagatt 28689715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 249 - 336
Target Start/End: Complemental strand, 41555584 - 41555497
Alignment:
Q  249 gaccacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatatttttt 336  Q
    ||||||||||||||  ||||| | |||||  |||||||||   |||| ||||||||||||||||| ||||| ||||||||| ||||||    
T  41555584 gaccacaaaaagtaactataaggggtaaacttgtcaaattaagcttaaaaatttgagaaggtcaattattgcgggacaaatttttttt 41555497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 105 - 139
Target Start/End: Original strand, 17493752 - 17493786
Alignment:
Q  105 ttactccctccgtccctgaataagtgacctatttg 139  Q
    |||||||||||||||||||||||||||||||||||    
T  17493752 ttactccctccgtccctgaataagtgacctatttg 17493786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 106 - 139
Target Start/End: Original strand, 10441143 - 10441176
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttg 139  Q
    ||||||||||||||||||||||||||||||||||    
T  10441143 tactccctccgtccctgaataagtgacctatttg 10441176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 106 - 139
Target Start/End: Complemental strand, 34408957 - 34408924
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttg 139  Q
    ||||||||||||||||||||||||||||||||||    
T  34408957 tactccctccgtccctgaataagtgacctatttg 34408924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 106 - 139
Target Start/End: Complemental strand, 40071749 - 40071716
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttg 139  Q
    ||||||||||||||||||||||||||||||||||    
T  40071749 tactccctccgtccctgaataagtgacctatttg 40071716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 171 - 251
Target Start/End: Complemental strand, 46870840 - 46870762
Alignment:
Q  171 gatgaaagaaagagagtgatacttttactgagttacccttgtcattattttgaaactttttcacttttaagtaatggtgac 251  Q
    ||||||||||||||| ||||| ||||||||| |   |||||| |||||||||||||   ||||||||||||||||| ||||    
T  46870840 gatgaaagaaagagaatgatatttttactgaatagtccttgttattattttgaaac--cttcacttttaagtaatgatgac 46870762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 106 - 139
Target Start/End: Complemental strand, 54438457 - 54438424
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttg 139  Q
    ||||||||||||||||||||||||||||||||||    
T  54438457 tactccctccgtccctgaataagtgacctatttg 54438424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 139
Target Start/End: Complemental strand, 925438 - 925403
Alignment:
Q  104 attactccctccgtccctgaataagtgacctatttg 139  Q
    ||||||||| ||||||||||||||||||||||||||    
T  925438 attactcccaccgtccctgaataagtgacctatttg 925403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 106 - 139
Target Start/End: Complemental strand, 51744784 - 51744751
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttg 139  Q
    |||||||||||||||| |||||||||||||||||    
T  51744784 tactccctccgtccctaaataagtgacctatttg 51744751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 106 - 142
Target Start/End: Complemental strand, 10385109 - 10385073
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttgacc 142  Q
    |||||||||||||||| ||||||||||||| ||||||    
T  10385109 tactccctccgtcccttaataagtgacctagttgacc 10385073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 116; Significance: 8e-59; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 106 - 246
Target Start/End: Original strand, 42897374 - 42897514
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgagtta 205  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||     
T  42897374 tactccctccgtccctgaataagtgacctatttgaccatttcacacagattaagaaaagtgtaaagatgaaagaaagagagtgatacttttactgagttg 42897473  T
Q  206 cccttgtcattattttgaaactttttcacttttaagtaatg 246  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  42897474 cccttgtcattattttgaaactttttcacttttaagtaatg 42897514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 106 - 246
Target Start/End: Complemental strand, 36982486 - 36982346
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgagtta 205  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||| ||||||||||||||||||||||     
T  36982486 tactccctccgtccctgaataagtgacctatttgaccatttcacacagattaagaaaagtgtaaagatgaaagaaaaagagtgatacttttactgagttg 36982387  T
Q  206 cccttgtcattattttgaaactttttcacttttaagtaatg 246  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  36982386 cccttgtcattattttgaaactttttcacttttaagtaatg 36982346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 106 - 246
Target Start/End: Complemental strand, 14044355 - 14044216
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgagtta 205  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||  |||       |||||||||||||||||||||||||||||||| ||| ||||     
T  14044355 tactccctccgtccctgaataagtgacctatttgatcatttcacacgtattaagaaaagtgtaaagatgaaagaaagagagtgatacttt-actaagttg 14044257  T
Q  206 cccttgtcattattttgaaactttttcacttttaagtaatg 246  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  14044256 cccttgtcattattttgaaactttttcacttttaaataatg 14044216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 244 - 363
Target Start/End: Complemental strand, 36982313 - 36982191
Alignment:
Q  244 atggtgaccacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatattttttataaa-- 341  Q
    |||| ||||||||||||||||||||| | |||||||||||||||||| | ||||||| |||||||||||||||||||||||||||||||||||| |||      
T  36982313 atggggaccacaaaaagtatttataaggggtaaatctgtcaaattttgcctagaaatatgagaaggtcaagtattgtgggacaaatattttttacaaata 36982214  T
Q  342 -gtcacttatttagggacggagg 363  Q
     |||||||||| |||||||||||    
T  36982213 ggtcacttattcagggacggagg 36982191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 244 - 337
Target Start/End: Original strand, 42897547 - 42897640
Alignment:
Q  244 atggtgaccacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatatttttta 337  Q
    |||| ||||||||||||||||||||| | |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||    
T  42897547 atggggaccacaaaaagtatttataaggggtaaatctgtcaaattttgcttagaaatctgagaaggtcaagtattgtgggacaaatatttttta 42897640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 244 - 363
Target Start/End: Complemental strand, 14044183 - 14044061
Alignment:
Q  244 atggtgaccacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatattttttataaa-- 341  Q
    |||| |||||||||||||||||||||   |||||||||||||||||| ||||||||| |||||||||||| |||| |||||||||||||||||| |||      
T  14044183 atggggaccacaaaaagtatttataagaggtaaatctgtcaaattttgcttagaaatctgagaaggtcaaatattatgggacaaatattttttacaaata 14044084  T
Q  342 -gtcacttatttagggacggagg 363  Q
     |||||||||| |||||||||||    
T  14044083 ggtcacttattcagggacggagg 14044061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 106 - 246
Target Start/End: Original strand, 36767876 - 36768014
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgagtta 205  Q
    |||||| ||| ||||||||||||||||||||||||||| ||||||||||||       |||||||||||||||||||||||||||| ||||||||| ||     
T  36767876 tactccgtccctccctgaataagtgacctatttgaccacttcacacagattaaaaagagtgtaaagatgaaagaaagagagtgatatttttactgaattg 36767975  T
Q  206 cccttgtcattattttgaaactttttcacttttaagtaatg 246  Q
    ||||| | |||||||| ||||   ||||||||||| |||||    
T  36767976 cccttattattatttttaaac--cttcacttttaaataatg 36768014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 249 - 336
Target Start/End: Original strand, 2970842 - 2970929
Alignment:
Q  249 gaccacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatatttttt 336  Q
    ||||||||||||||||||||  | |||||| ||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||    
T  2970842 gaccacaaaaagtatttatacggggtaaatttgtcaaattctgcttagaaatttgagaatgtcaagtattgtgggacaaatatttttt 2970929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 106 - 222
Target Start/End: Complemental strand, 5712716 - 5712600
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgagtta 205  Q
    |||||||||||||||||||||| ||||||| ||||||||| ||||||||||        ||||||||||||||||||| ||||||| |||| |||| ||     
T  5712716 tactccctccgtccctgaataaatgacctacttgaccattccacacagattaagaaaaatgtaaagatgaaagaaagaaagtgatattttttctgaattg 5712617  T
Q  206 cccttgtcattattttg 222  Q
    ||||| | |||||||||    
T  5712616 cccttattattattttg 5712600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 106 - 246
Target Start/End: Original strand, 2970666 - 2970805
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgagtta 205  Q
    ||||||||| |||||| ||||  ||||||| ||||||||||||||||||||        ||||||||||||||||||| | ||||| ||| ||||| ||     
T  2970666 tactccctctgtccctcaatatttgacctacttgaccatttcacacagattaagaaaaatgtaaagatgaaagaaagataatgatattttcactgaattg 2970765  T
Q  206 cccttg-tcattattttgaaactttttcacttttaagtaatg 246  Q
    |||||| | |||||||||||||   |||||||||||||||||    
T  2970766 cccttgttaattattttgaaac--cttcacttttaagtaatg 2970805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 120 - 226
Target Start/End: Complemental strand, 33404515 - 33404409
Alignment:
Q  120 ctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgagttacccttgtcattatt 219  Q
    |||||||||||||||| |||| ||||| |||||||||        ||||||||||||||||||||||||||| ||||||||| || ||||| | ||||||    
T  33404515 ctgaataagtgacctacttgatcattttacacagattaagaaaaatgtaaagatgaaagaaagagagtgatatttttactgaattgcccttattattatt 33404416  T
Q  220 ttgaaac 226  Q
    || ||||    
T  33404415 tttaaac 33404409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 103 - 139
Target Start/End: Original strand, 14044053 - 14044089
Alignment:
Q  103 tattactccctccgtccctgaataagtgacctatttg 139  Q
    |||||||||||||||||||||||||||||||||||||    
T  14044053 tattactccctccgtccctgaataagtgacctatttg 14044089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 104 - 139
Target Start/End: Original strand, 36982184 - 36982219
Alignment:
Q  104 attactccctccgtccctgaataagtgacctatttg 139  Q
    ||||||||||||||||||||||||||||||||||||    
T  36982184 attactccctccgtccctgaataagtgacctatttg 36982219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 280 - 363
Target Start/End: Complemental strand, 33403285 - 33403199
Alignment:
Q  280 tgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatattttttataaa---gtcacttatttagggacggagg 363  Q
    ||||||||||| |||  |||||||||||||||||||||| | |||||| | ||||||| |||    ||||||||| |||||||||||    
T  33403285 tgtcaaattttgctttaaaatttgagaaggtcaagtattttaggacaatttttttttacaaatagatcacttattcagggacggagg 33403199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 106 - 138
Target Start/End: Complemental strand, 36768889 - 36768857
Alignment:
Q  106 tactccctccgtccctgaataagtgacctattt 138  Q
    |||||||||||||||||||||||||||||||||    
T  36768889 tactccctccgtccctgaataagtgacctattt 36768857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 141
Target Start/End: Complemental strand, 5213183 - 5213148
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttgac 141  Q
    |||||||||||||||||||||||||||||| |||||    
T  5213183 tactccctccgtccctgaataagtgacctagttgac 5213148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 141
Target Start/End: Complemental strand, 37304406 - 37304371
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttgac 141  Q
    |||||||||||||||||||||||||||||| |||||    
T  37304406 tactccctccgtccctgaataagtgacctagttgac 37304371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 105 - 139
Target Start/End: Original strand, 33403193 - 33403227
Alignment:
Q  105 ttactccctccgtccctgaataagtgacctatttg 139  Q
    ||||||||||||||||||||||||||| |||||||    
T  33403193 ttactccctccgtccctgaataagtgatctatttg 33403227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 100 - 132
Target Start/End: Original strand, 1780942 - 1780974
Alignment:
Q  100 ttttattactccctccgtccctgaataagtgac 132  Q
    |||||||||||||||||||||| ||||||||||    
T  1780942 ttttattactccctccgtcccttaataagtgac 1780974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 112; Significance: 2e-56; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 106 - 246
Target Start/End: Complemental strand, 40497073 - 40496933
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgagtta 205  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||     
T  40497073 tactccctccgtcccttaataagtgacctatttgaccatttcacacagattaagaaaagtgtaaagatgaaagaaagagagtgatacttttactgagttg 40496974  T
Q  206 cccttgtcattattttgaaactttttcacttttaagtaatg 246  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  40496973 cccttgtcattattttgaaactttttcacttttaagtaatg 40496933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 104 - 246
Target Start/End: Complemental strand, 51545964 - 51545822
Alignment:
Q  104 attactccctccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgagt 203  Q
    ||||||| ||||||||||||||||||||||||||||| |||||||||||||||       ||||||||||||||||||||||||||||||||||||||||    
T  51545964 attactctctccgtccctgaataagtgacctatttgatcatttcacacagattaagaaaagtgtaaagatgaaagaaagagagtgatacttttactgagt 51545865  T
Q  204 tacccttgtcattattttgaaactttttcacttttaagtaatg 246  Q
    | |||||||||||||||||||||||||||||||||||||||||    
T  51545864 tgcccttgtcattattttgaaactttttcacttttaagtaatg 51545822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 106 - 246
Target Start/End: Complemental strand, 48170024 - 48169884
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgagtta 205  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||       |||||||||| ||||||||||||||||||| |||||||| |     
T  48170024 tactccctccgtcccttaataagtgacctatttgaccatttcacacagattaagaaaagtgtaaagataaaagaaagagagtgatactattactgagctg 48169925  T
Q  206 cccttgtcattattttgaaactttttcacttttaagtaatg 246  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  48169924 cccttgtcattattttgaaactttttcacttttaagtaatg 48169884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 106 - 246
Target Start/End: Original strand, 13542792 - 13542932
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgagtta 205  Q
    |||||| |||||||||||||||||||||||||||||||||||| | |||||       |||||||||||||||||||||| ||||||||||||||||||     
T  13542792 tactccatccgtccctgaataagtgacctatttgaccatttcatatagattaagaaaagtgtaaagatgaaagaaagagattgatacttttactgagttg 13542891  T
Q  206 cccttgtcattattttgaaactttttcacttttaagtaatg 246  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  13542892 cccttgtcattattttaaaactttttcacttttaagtaatg 13542932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 106 - 246
Target Start/End: Complemental strand, 41346347 - 41346207
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgagtta 205  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||||||       |||||||||||||||||||  ||||||||||||||||||||     
T  41346347 tactccctccgtccctgaataagtgacatatttgactatttcacacagattaagaaaagtgtaaagatgaaagaaagtaagtgatacttttactgagttg 41346248  T
Q  206 cccttgtcattattttgaaactttttcacttttaagtaatg 246  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  41346247 cccttgtcattattttaaaactttttcacttttaagtaatg 41346207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 106 - 245
Target Start/End: Complemental strand, 54014537 - 54014398
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgagtta 205  Q
    ||||||||| |||||| ||||||| ||||||||||||||||||||||||||       |||||||||| ||||||||||||||||||||||||||||||     
T  54014537 tactccctctgtcccttaataagtaacctatttgaccatttcacacagattaagaaaagtgtaaagataaaagaaagagagtgatacttttactgagttg 54014438  T
Q  206 cccttgtcattattttgaaactttttcacttttaagtaat 245  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  54014437 cccttatcattattttgaaactttttcacttttaagtaat 54014398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 106 - 246
Target Start/End: Complemental strand, 50676773 - 50676634
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgagtta 205  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||       |||||||||| ||||||||||||||||| ||||||||||||     
T  50676773 tactccctccgtcccttaataagtgacctatttgaccatttcacacagattaagaaaagtgtaaagataaaagaaagagagtgatatttttactgagtt- 50676675  T
Q  206 cccttgtcattattttgaaactttttcacttttaagtaatg 246  Q
     ||||||||||||||| ||||||||||||||||||||||||    
T  50676674 gccttgtcattattttaaaactttttcacttttaagtaatg 50676634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 133 - 246
Target Start/End: Complemental strand, 24709283 - 24709170
Alignment:
Q  133 ctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgagttacccttgtcattattttgaaactttttc 232  Q
    ||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  24709283 ctatttgaccatttcacacagattaagaaaagtgtaaagatgaaagaaagagagtgatacttttactgagttgcccttgtcattattttgaaattttttc 24709184  T
Q  233 acttttaagtaatg 246  Q
    ||||||||||||||    
T  24709183 acttttaagtaatg 24709170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 244 - 372
Target Start/End: Complemental strand, 41346174 - 41346042
Alignment:
Q  244 atggtgaccacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatattttttataaa-- 341  Q
    |||| ||||||||||||||||||||| | |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| |||      
T  41346174 atggggaccacaaaaagtatttataaggggtaaatctgtcaaattttgcttagaaatctgagaaggtcaagtattgtgggacaaatattttttacaaata 41346075  T
Q  342 -gtcacttatttagggacgga-ggagtattgaa 372  Q
     |||||||||| ||||||||| |||||||||||    
T  41346074 ggtcacttattcagggacggagggagtattgaa 41346042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 244 - 363
Target Start/End: Complemental strand, 54014364 - 54014242
Alignment:
Q  244 atggtgaccacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatattttttataaa-- 341  Q
    |||| ||||||||||||||||||||| | |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| |||      
T  54014364 atggggaccacaaaaagtatttataaggggtaaatctgtcaaattttgcttagaaatctgagaaggtcaagtattgtgggacaaatattttttacaaata 54014265  T
Q  342 -gtcacttatttagggacggagg 363  Q
     |||||||||| |||||||||||    
T  54014264 ggtcacttattcagggacggagg 54014242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 244 - 363
Target Start/End: Original strand, 12568181 - 12568303
Alignment:
Q  244 atggtgaccacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatattttttataaa-- 341  Q
    |||| ||||||||||||||||||||| | |||||||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||||| |||      
T  12568181 atggggaccacaaaaagtatttataaggggtaaatctgtcaaattttgcttagaaatctgagaaagtcaagtattgtgggacaaatattttttacaaata 12568280  T
Q  342 -gtcacttatttagggacggagg 363  Q
     |||||||||| |||||||||||    
T  12568281 tgtcacttattcagggacggagg 12568303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 244 - 363
Target Start/End: Original strand, 13544645 - 13544767
Alignment:
Q  244 atggtgaccacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatattttttataaa-- 341  Q
    |||| ||||||||||||||||||||| | |||||||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||||| |||      
T  13544645 atggggaccacaaaaagtatttataaggggtaaatctgtcaaattttgcttagaaatctgagaaagtcaagtattgtgggacaaatattttttacaaata 13544744  T
Q  342 -gtcacttatttagggacggagg 363  Q
     |||||||||| |||||||||||    
T  13544745 tgtcacttattcagggacggagg 13544767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 244 - 363
Target Start/End: Complemental strand, 51545789 - 51545667
Alignment:
Q  244 atggtgaccacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatattttttataaa-- 341  Q
    |||| ||||||||||||||||||||| | |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| |||      
T  51545789 atggggaccacaaaaagtatttataaggggtaaatctgtcaaattttgcttagaaatctgagaaggtcaagtattgtgggacaaatattttttacaaata 51545690  T
Q  342 -gtcacttatttagggacggagg 363  Q
     |||||||||| ||| |||||||    
T  51545689 ggtcacttattcaggaacggagg 51545667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 249 - 363
Target Start/End: Complemental strand, 50676597 - 50676480
Alignment:
Q  249 gaccacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatattttttataaa---gtca 345  Q
    ||||||||||||||||||||| | |||||||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||| |||   ||||    
T  50676597 gaccacaaaaagtatttataaggggtaaatctgtcaaattttgcttaaaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtca 50676498  T
Q  346 cttatttagggacggagg 363  Q
    |||||| |||||||||||    
T  50676497 cttattcagggacggagg 50676480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 244 - 363
Target Start/End: Complemental strand, 40496900 - 40496778
Alignment:
Q  244 atggtgaccacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatattttttataaa-- 341  Q
    |||| ||||||||||||||||||||| | ||||||||||||||||||  |||||||| |||||||||||||||||||||||||||||||||||| |||      
T  40496900 atggggaccacaaaaagtatttataaggggtaaatctgtcaaattttgtttagaaatctgagaaggtcaagtattgtgggacaaatattttttacaaata 40496801  T
Q  342 -gtcacttatttagggacggagg 363  Q
     |||||||||| | |||||||||    
T  40496800 ggtcacttattcaaggacggagg 40496778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 249 - 359
Target Start/End: Complemental strand, 24709132 - 24709019
Alignment:
Q  249 gaccacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatattttttataaa---gtca 345  Q
    |||||||||||||||||||||||  ||||||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||| |||   ||||    
T  24709132 gaccacaaaaagtatttataaaggataaatctgtcaaattttgcttataaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtca 24709033  T
Q  346 cttatttagggacg 359  Q
    |||||| |||||||    
T  24709032 cttattcagggacg 24709019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 108 - 246
Target Start/End: Complemental strand, 48737824 - 48737686
Alignment:
Q  108 ctccctccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgagttacc 207  Q
    |||||||||||| | ||||  ||||||| ||||| ||||||||||||||       ||||| |||||||||||||| | ||||| ||||||||| || ||    
T  48737824 ctccctccgtccttcaatacttgacctacttgacaatttcacacagattaagaaaagtgtagagatgaaagaaagaaaatgatatttttactgaattgcc 48737725  T
Q  208 cttgtcattattttgaaactttttcacttttaagtaatg 246  Q
    |||||||||||||||||||||||||||||||||||||||    
T  48737724 cttgtcattattttgaaactttttcacttttaagtaatg 48737686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 244 - 363
Target Start/End: Complemental strand, 48169851 - 48169729
Alignment:
Q  244 atggtgaccacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatattttttataaa-- 341  Q
    |||| ||||||||||||||||||||| |  ||||||||||||||||| ||||||||| ||||||||||||||||| |||||||||||||||||| |||      
T  48169851 atggggaccacaaaaagtatttataagggataaatctgtcaaattttgcttagaaatctgagaaggtcaagtattatgggacaaatattttttacaaata 48169752  T
Q  342 -gtcacttatttagggacggagg 363  Q
     |||||||||| || ||||||||    
T  48169751 ggtcacttattcagagacggagg 48169729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 106 - 226
Target Start/End: Complemental strand, 30462967 - 30462848
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgagtta 205  Q
    |||||| |||||||| |||||||||| ||| ||||||||||||||||||||       || ||||||||||||||| ||||||||| ||||||||| ||     
T  30462967 tactccatccgtccc-gaataagtgatctacttgaccatttcacacagattaagaaaagtataaagatgaaagaaatagagtgatatttttactgaattg 30462869  T
Q  206 cccttgtcattattttgaaac 226  Q
    ||||| | |||||||| ||||    
T  30462868 cccttattattatttttaaac 30462848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 244 - 336
Target Start/End: Complemental strand, 48737653 - 48737561
Alignment:
Q  244 atggtgaccacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatatttttt 336  Q
    |||| ||||||||||||||||||||||| |||||| ||||||||| | |||| |||| ||| ||| ||||||||| |  ||||||||||||||    
T  48737653 atggggaccacaaaaagtatttataaagggtaaatttgtcaaattctgcttaaaaatctgaaaagatcaagtattataagacaaatatttttt 48737561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 280 - 363
Target Start/End: Complemental strand, 30459897 - 30459811
Alignment:
Q  280 tgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatattttttataaa---gtcacttatttagggacggagg 363  Q
    ||||||||||| |||  ||||||||||||||||||||||  ||||||| | ||||||| |||   |||||||||| |||||||||||    
T  30459897 tgtcaaattttgctttaaaatttgagaaggtcaagtatttagggacaatttttttttacaaataggtcacttattcagggacggagg 30459811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 103 - 139
Target Start/End: Original strand, 54014234 - 54014270
Alignment:
Q  103 tattactccctccgtccctgaataagtgacctatttg 139  Q
    |||||||||||||||||||||||||||||||||||||    
T  54014234 tattactccctccgtccctgaataagtgacctatttg 54014270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 106 - 139
Target Start/End: Original strand, 30459806 - 30459839
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttg 139  Q
    ||||||||||||||||||||||||||||||||||    
T  30459806 tactccctccgtccctgaataagtgacctatttg 30459839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 106 - 139
Target Start/End: Original strand, 41346047 - 41346080
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttg 139  Q
    ||||||||||||||||||||||||||||||||||    
T  41346047 tactccctccgtccctgaataagtgacctatttg 41346080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 106 - 139
Target Start/End: Original strand, 50676475 - 50676508
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttg 139  Q
    ||||||||||||||||||||||||||||||||||    
T  50676475 tactccctccgtccctgaataagtgacctatttg 50676508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 139
Target Start/End: Complemental strand, 12568310 - 12568275
Alignment:
Q  104 attactccctccgtccctgaataagtgacctatttg 139  Q
    ||||||||||||||||||||||||||||| ||||||    
T  12568310 attactccctccgtccctgaataagtgacatatttg 12568275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 139
Target Start/End: Complemental strand, 13544774 - 13544739
Alignment:
Q  104 attactccctccgtccctgaataagtgacctatttg 139  Q
    ||||||||||||||||||||||||||||| ||||||    
T  13544774 attactccctccgtccctgaataagtgacatatttg 13544739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 141
Target Start/End: Original strand, 34827322 - 34827357
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttgac 141  Q
    |||||||||||||||||||||||||||||| |||||    
T  34827322 tactccctccgtccctgaataagtgacctagttgac 34827357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 141
Target Start/End: Original strand, 38492052 - 38492087
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttgac 141  Q
    |||||||||||||||||||||||||||||| |||||    
T  38492052 tactccctccgtccctgaataagtgacctagttgac 38492087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 139
Target Start/End: Original strand, 51545660 - 51545695
Alignment:
Q  104 attactccctccgtccctgaataagtgacctatttg 139  Q
    |||||||||||||| |||||||||||||||||||||    
T  51545660 attactccctccgttcctgaataagtgacctatttg 51545695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 106 - 139
Target Start/End: Original strand, 40496773 - 40496806
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttg 139  Q
    |||||||||||||| |||||||||||||||||||    
T  40496773 tactccctccgtccttgaataagtgacctatttg 40496806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 106 - 139
Target Start/End: Original strand, 48169724 - 48169757
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttg 139  Q
    ||||||||||||| ||||||||||||||||||||    
T  48169724 tactccctccgtctctgaataagtgacctatttg 48169757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 112; Significance: 2e-56; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 106 - 246
Target Start/End: Complemental strand, 29194288 - 29194148
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgagtta 205  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||       |||||||||||||||||||||||||||||||||||||||||     
T  29194288 tactccctccgtccctgaataagtgacctatttgaccatttcacacaaattaagaaaagtgtaaagatgaaagaaagagagtgatacttttactgagttg 29194189  T
Q  206 cccttgtcattattttgaaactttttcacttttaagtaatg 246  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  29194188 cccttgtcattattttgaaactttttcacttttaagtaatg 29194148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 105 - 246
Target Start/End: Complemental strand, 2110521 - 2110380
Alignment:
Q  105 ttactccctccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgagtt 204  Q
    ||||||| |||||||||||||||||||| ||||||| |||||||||||||||       |||||||||||||||||||||||||||||||||||||||||    
T  2110521 ttactccttccgtccctgaataagtgacatatttgatcatttcacacagattaagaaaagtgtaaagatgaaagaaagagagtgatacttttactgagtt 2110422  T
Q  205 acccttgtcattattttgaaactttttcacttttaagtaatg 246  Q
     |||||||||||||||||||||||||||||||||||||||||    
T  2110421 gcccttgtcattattttgaaactttttcacttttaagtaatg 2110380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 101 - 246
Target Start/End: Complemental strand, 43370979 - 43370834
Alignment:
Q  101 tttattactccctccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactg 200  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||       ||||||| || ||||||||||||||||||||||||||    
T  43370979 tttaatactccctccgtcccttaataagtgacctatttgaccatttcacacagattaagaaaagtgtaaaaataaaagaaagagagtgatacttttactg 43370880  T
Q  201 agttacccttgtcattattttgaaactttttcacttttaagtaatg 246  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  43370879 agttgcccttgtcattattttgaaactttttcacttttaagtaatg 43370834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 106 - 246
Target Start/End: Original strand, 28585683 - 28585823
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgagtta 205  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||||||||       |||||||||| ||||||||||||||||||||||||||||||     
T  28585683 tactccatccgtcccttaataagtgacctatttgaccatttcacacagattaagaaaagtgtaaagataaaagaaagagagtgatacttttactgagttg 28585782  T
Q  206 cccttgtcattattttgaaactttttcacttttaagtaatg 246  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  28585783 cccttgtcattattttgaaactttttcacttttaagtaatg 28585823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 106 - 246
Target Start/End: Original strand, 8381316 - 8381456
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgagtta 205  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||        ||||||||||||||||| ||||||||||||||||||||||     
T  8381316 tactccctccgtccctgaataagtgatctatttgaccatttcacacagattaagaaaaatgtaaagatgaaagaaatagagtgatacttttactgagttg 8381415  T
Q  206 cccttgtcattattttgaaactttttcacttttaagtaatg 246  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  8381416 cccttgtcattattttgaaactttttcatttttaagtaatg 8381456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 106 - 246
Target Start/End: Original strand, 45080420 - 45080558
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgagtta 205  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||  ||||||||||||||||||     
T  45080420 tactccctccgtccctgaataagtgacctatttgaccatttcacacagattaagaaaagtgtaaagatgaaagaaagag--tgatacttttactgagttg 45080517  T
Q  206 cccttgtcattattttgaaactttttcacttttaagtaatg 246  Q
    ||||| ||||||| |||||||||||||||||||||||||||    
T  45080518 cccttatcattatgttgaaactttttcacttttaagtaatg 45080558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 111 - 246
Target Start/End: Original strand, 4828094 - 4828229
Alignment:
Q  111 cctccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgagttaccctt 210  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||||       |||||||||| ||||||| |||||||||||||||||||||| |||||    
T  4828094 cctccgttccttaataagtgacctatttgaccatttcacacagattaagaaaagtgtaaagataaaagaaaaagagtgatacttttactgagttgccctt 4828193  T
Q  211 gtcattattttgaaactttttcacttttaagtaatg 246  Q
    ||||||||||||||||||||||||||||||||||||    
T  4828194 gtcattattttgaaactttttcacttttaagtaatg 4828229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 244 - 363
Target Start/End: Original strand, 45080591 - 45080713
Alignment:
Q  244 atggtgaccacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatattttttataaa-- 341  Q
    |||| ||||||||||||||||||||| | |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| |||      
T  45080591 atggggaccacaaaaagtatttataaggggtaaatctgtcaaattttgcttagaaatctgagaaggtcaagtattgtgggacaaatattttttacaaata 45080690  T
Q  342 -gtcacttatttagggacggagg 363  Q
     |||||||||| |||||||||||    
T  45080691 ggtcacttattcagggacggagg 45080713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 244 - 363
Target Start/End: Complemental strand, 2110347 - 2110225
Alignment:
Q  244 atggtgaccacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatattttttataaa-- 341  Q
    |||| ||||||||||||||||||||| | |||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||| |||      
T  2110347 atggggaccacaaaaagtatttataaggggtaaatctgtcaaattttgcttagaaatctgataaggtcaagtattgtgggacaaatattttttacaaata 2110248  T
Q  342 -gtcacttatttagggacggagg 363  Q
     |||||||||| |||||||||||    
T  2110247 ggtcacttattcagggacggagg 2110225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 244 - 363
Target Start/End: Original strand, 4828262 - 4828384
Alignment:
Q  244 atggtgaccacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatattttttataaa-- 341  Q
    |||| ||||||||||||||||||||| | |||||| ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| |||      
T  4828262 atggggaccacaaaaagtatttataaggggtaaatttgtcaaattttgcttagaaatttgagaaggtcaaatattgtgggacaaatattttttacaaata 4828361  T
Q  342 -gtcacttatttagggacggagg 363  Q
     |||||||||| |||||||||||    
T  4828362 tgtcacttattgagggacggagg 4828384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 244 - 363
Target Start/End: Original strand, 28585856 - 28585978
Alignment:
Q  244 atggtgaccacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatattttttataaa-- 341  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||||||| ||||||||||||| |||||||||||| |||      
T  28585856 atggggaccacaaaaagtatttataaagggtaaatctgtcaaattttgcttagaaatctgagaaggttaagtattgtgggataaatattttttacaaata 28585955  T
Q  342 -gtcacttatttagggacggagg 363  Q
     |||||||||| |||||||||||    
T  28585956 ggtcacttattcagggacggagg 28585978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 244 - 363
Target Start/End: Complemental strand, 43370801 - 43370679
Alignment:
Q  244 atggtgaccacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatattttttataaa-- 341  Q
    |||| ||||||||||||||||||||| | |||||||||||||||||| ||||||||| | |||||||||||||||||||||||||||||||||| |||      
T  43370801 atggggaccacaaaaagtatttataaggggtaaatctgtcaaattttgcttagaaatctaagaaggtcaagtattgtgggacaaatattttttacaaata 43370702  T
Q  342 -gtcacttatttagggacggagg 363  Q
     |||||||||| |||||||||||    
T  43370701 ggtcacttattcagggacggagg 43370679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 249 - 337
Target Start/End: Original strand, 8381494 - 8381582
Alignment:
Q  249 gaccacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatatttttta 337  Q
    ||||||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  8381494 gaccacaaaaagtatttataaggggtaaatctgtcaaattttatttagaaatttgagaaggtcaagtatcgtgggacaaatatttttta 8381582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 249 - 363
Target Start/End: Complemental strand, 29194110 - 29193993
Alignment:
Q  249 gaccacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatattttttataaa---gtca 345  Q
    ||||||||||||||||||||| | |||||||||||||||||| ||||||||| ||||||||||||||||||||||||| || ||||||| |||   ||||    
T  29194110 gaccacaaaaagtatttataaggggtaaatctgtcaaattttgcttagaaatctgagaaggtcaagtattgtgggacacattttttttacaaataggtca 29194011  T
Q  346 cttatttagggacggagg 363  Q
    |||||| |||||||||||    
T  29194010 cttattcagggacggagg 29193993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 106 - 210
Target Start/End: Complemental strand, 30422692 - 30422588
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgagtta 205  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||       |||||| ||||||||||||||||||||||||||||||||||     
T  30422692 tactccctccgtcgctgaataagtgacctatttgaccatttcacacagattaagaaaagtgtaacgatgaaagaaagagagtgatacttttactgagttg 30422593  T
Q  206 ccctt 210  Q
    |||||    
T  30422592 ccctt 30422588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 101 - 226
Target Start/End: Original strand, 31921616 - 31921741
Alignment:
Q  101 tttattactccctccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactg 200  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||       |||||||||||||||||||||||||||| |||||||     
T  31921616 tttactactccctccgtccctgaataagtgatctatttgaccatttcacacagattaagaaaagtgtaaagatgaaagaaagagagtgatatttttacta 31921715  T
Q  201 agttacccttgtcattattttgaaac 226  Q
    | || ||||| | |||||||| ||||    
T  31921716 aattgcccttattattatttttaaac 31921741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 107 - 246
Target Start/End: Original strand, 1779073 - 1779212
Alignment:
Q  107 actccctccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgagttac 206  Q
    ||||| ||||||||| ||||  |||| || |||||||||||||| |||||       |||||||||||||||||||| | ||||| ||||||||| ||      
T  1779073 actccttccgtccctcaatacttgacttacttgaccatttcacatagattaagaaaagtgtaaagatgaaagaaagataatgatatttttactgaattgt 1779172  T
Q  207 ccttgtcattattttgaaactttttcacttttaagtaatg 246  Q
    | ||||||||||||||||||||||||||||||||||||||    
T  1779173 ctttgtcattattttgaaactttttcacttttaagtaatg 1779212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 130 - 246
Target Start/End: Complemental strand, 9370650 - 9370534
Alignment:
Q  130 gacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgagttacccttgtcattattttgaaacttt 229  Q
    |||||| ||||||||||||||||||||       |||||||||||||| ||||| | ||||  ||||||||| ||  |||||||||||||||||||||||    
T  9370650 gacctacttgaccatttcacacagattaagaaaagtgtaaagatgaaaaaaagaaaatgatttttttactgaattgtccttgtcattattttgaaacttt 9370551  T
Q  230 ttcacttttaagtaatg 246  Q
    |||||||||||||||||    
T  9370550 ttcacttttaagtaatg 9370534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 244 - 335
Target Start/End: Complemental strand, 16964943 - 16964852
Alignment:
Q  244 atggtgaccacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatattttt 335  Q
    |||| ||||||||||||||||||||| | |||||  |||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||    
T  16964943 atggagaccacaaaaagtatttataaggggtaaacttgtcaaattttacttaaaaatttgagaaggtcaagtattgtgggacgaattttttt 16964852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 249 - 336
Target Start/End: Original strand, 39646504 - 39646591
Alignment:
Q  249 gaccacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatatttttt 336  Q
    ||||||||||||||||||||| | |||||| ||||||||| || |||||||| |||||| ||||| ||||||||||||||||||||||    
T  39646504 gaccacaaaaagtatttataaggggtaaatttgtcaaattctatttagaaatctgagaatgtcaaatattgtgggacaaatatttttt 39646591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 244 - 334
Target Start/End: Original strand, 1779245 - 1779335
Alignment:
Q  244 atggtgaccacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatatttt 334  Q
    |||| ||||||||||||||||||||||| |||||||||| ||||| | ||||||||| ||||||| ||| | |||||||||||||||||||    
T  1779245 atggggaccacaaaaagtatttataaagggtaaatctgttaaattctgcttagaaatctgagaagatcaggcattgtgggacaaatatttt 1779335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 102 - 221
Target Start/End: Complemental strand, 25898884 - 25898766
Alignment:
Q  102 ttattactccctccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactga 201  Q
    |||||||||||||||| |||||||||||||| || ||||||||||||||||||||       |||||||||||||||||| | ||||||| |||||||||    
T  25898884 ttattactccctccgttcctgaataagtgac-tacttgaccatttcacacagattaagaagagtgtaaagatgaaagaaaaaaagtgatatttttactga 25898786  T
Q  202 gttacccttgtcattatttt 221  Q
     || ||||| | ||||||||    
T  25898785 attgcccttattattatttt 25898766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 252 - 336
Target Start/End: Original strand, 42847088 - 42847172
Alignment:
Q  252 cacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatatttttt 336  Q
    |||||||||||||||||| | |||||| ||||||||| | |||| |||| ||| ||||||||||||| |||||||||||||||||    
T  42847088 cacaaaaagtatttataaggggtaaatttgtcaaattctgcttaaaaatctgaaaaggtcaagtattatgggacaaatatttttt 42847172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 280 - 362
Target Start/End: Original strand, 31922048 - 31922133
Alignment:
Q  280 tgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatattttttataaa---gtcacttatttagggacggag 362  Q
    ||||||||||| |||  |||||||||||||||||||||| |||||||| | ||||||| |||   |||||||||||||||||||||    
T  31922048 tgtcaaattttgctttaaaatttgagaaggtcaagtattttgggacaatttttttttacaaatatgtcacttatttagggacggag 31922133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 106 - 246
Target Start/End: Original strand, 43377208 - 43377346
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgagtta 205  Q
    |||||||||||||| | ||||  |||||||  | ||||||||| ||| |||       |||||||||||||||||||| | ||||||||||||||| ||     
T  43377208 tactccctccgtccttcaatacttgacctacataaccatttcaaacaaattaagaaaagtgtaaagatgaaagaaagaaaatgatacttttactgaattg 43377307  T
Q  206 cccttgtcattattttgaaactttttcacttttaagtaatg 246  Q
      ||||| |||||||||||||   |||||||||||||||||    
T  43377308 tacttgttattattttgaaac--cttcacttttaagtaatg 43377346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 165 - 226
Target Start/End: Original strand, 39646365 - 39646426
Alignment:
Q  165 tgtaaagatgaaagaaagagagtgatacttttactgagttacccttgtcattattttgaaac 226  Q
    |||||| |||||||||||||| ||||| ||||||||| || ||||||| |||||||||||||    
T  39646365 tgtaaaaatgaaagaaagagaatgatatttttactgaattgcccttgttattattttgaaac 39646426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 102 - 139
Target Start/End: Original strand, 43370670 - 43370707
Alignment:
Q  102 ttattactccctccgtccctgaataagtgacctatttg 139  Q
    ||||||||||||||||||||||||||||||||||||||    
T  43370670 ttattactccctccgtccctgaataagtgacctatttg 43370707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 105 - 139
Target Start/End: Original strand, 2110219 - 2110253
Alignment:
Q  105 ttactccctccgtccctgaataagtgacctatttg 139  Q
    |||||||||||||||||||||||||||||||||||    
T  2110219 ttactccctccgtccctgaataagtgacctatttg 2110253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 105 - 139
Target Start/End: Original strand, 25898462 - 25898496
Alignment:
Q  105 ttactccctccgtccctgaataagtgacctatttg 139  Q
    |||||||||||||||||||||||||||||||||||    
T  25898462 ttactccctccgtccctgaataagtgacctatttg 25898496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 129 - 246
Target Start/End: Complemental strand, 16970431 - 16970316
Alignment:
Q  129 tgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgagttacccttgtcattattttgaaactt 228  Q
    ||||||| ||| |||||||||||| |||       |||||||||| ||||||||| | ||||| ||||||||| || ||||| | |||||||| |||| |    
T  16970431 tgacctacttggccatttcacacatattaagaaaagtgtaaagataaaagaaagataatgatatttttactgaattgcccttattattatttttaaacct 16970332  T
Q  229 tttcacttttaagtaatg 246  Q
    |  |||||||||||||||    
T  16970331 t--cacttttaagtaatg 16970316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 106 - 139
Target Start/End: Original strand, 29193988 - 29194021
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttg 139  Q
    ||||||||||||||||||||||||||||||||||    
T  29193988 tactccctccgtccctgaataagtgacctatttg 29194021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 106 - 139
Target Start/End: Complemental strand, 45080718 - 45080685
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttg 139  Q
    ||||||||||||||||||||||||||||||||||    
T  45080718 tactccctccgtccctgaataagtgacctatttg 45080685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 264 - 363
Target Start/End: Complemental strand, 25898570 - 25898468
Alignment:
Q  264 ttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatattttttataaa---gtcacttatttagggacgg 360  Q
    |||||| |||||||  | ||||||||| |||  ||||||||||||||| |||||| ||||| || | ||||||| |||   |||||||||| ||||||||    
T  25898570 ttataaggagtaaaattatcaaattttgctttaaaatttgagaaggtcgagtattttgggataatttttttttacaaataggtcacttattcagggacgg 25898471  T
Q  361 agg 363  Q
    |||    
T  25898470 agg 25898468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 141
Target Start/End: Complemental strand, 7443152 - 7443117
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttgac 141  Q
    |||||||||||||||||||||||||||||| |||||    
T  7443152 tactccctccgtccctgaataagtgacctagttgac 7443117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 139
Target Start/End: Complemental strand, 28585981 - 28585950
Alignment:
Q  108 ctccctccgtccctgaataagtgacctatttg 139  Q
    ||||||||||||||||||||||||||||||||    
T  28585981 ctccctccgtccctgaataagtgacctatttg 28585950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 100 - 140
Target Start/End: Original strand, 20917723 - 20917763
Alignment:
Q  100 ttttattactccctccgtccctgaataagtgacctatttga 140  Q
    |||||||||||||||||||||| ||||| ||||||| ||||    
T  20917723 ttttattactccctccgtcccttaataaatgacctagttga 20917763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 108; Significance: 5e-54; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 106 - 246
Target Start/End: Complemental strand, 18575328 - 18575188
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgagtta 205  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| |||       |||||||||||||||||||||||||||||||||||||||||     
T  18575328 tactccctccgtccctgaataagtgacctatttgatcatttcacacaaattaagaaaagtgtaaagatgaaagaaagagagtgatacttttactgagttg 18575229  T
Q  206 cccttgtcattattttgaaactttttcacttttaagtaatg 246  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  18575228 cccttgtcattattttgaaactttttcacttttaagtaatg 18575188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 103 - 246
Target Start/End: Complemental strand, 11254803 - 11254660
Alignment:
Q  103 tattactccctccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgag 202  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| | |||       |||||||||||||||||||||||||||||||||||||||    
T  11254803 tattactccctccgtccctgaataagtgacctatttgaccattccacataaattaagaaaagtgtaaagatgaaagaaagagagtgatacttttactgag 11254704  T
Q  203 ttacccttgtcattattttgaaactttttcacttttaagtaatg 246  Q
    || |||||||||||||||||||||||||||||||||||||||||    
T  11254703 ttgcccttgtcattattttgaaactttttcacttttaagtaatg 11254660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 106 - 246
Target Start/End: Complemental strand, 17493826 - 17493686
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgagtta 205  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||       |||||||||||||||||||||||||||||||||||| ||||     
T  17493826 tactccctccgtccctgaataagtgacctatttgatcatttcacacagattaagaaaagtgtaaagatgaaagaaagagagtgatacttttactaagttg 17493727  T
Q  206 cccttgtcattattttgaaactttttcacttttaagtaatg 246  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  17493726 cccttgtcattattttgaaactttttcatttttaagtaatg 17493686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 106 - 246
Target Start/End: Complemental strand, 27821073 - 27820933
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgagtta 205  Q
    |||||||| ||||| | ||||||||||||||||||||||||||||||||||       |||||||||| ||||||||||||||||||||||||||||||     
T  27821073 tactcccttcgtcctttaataagtgacctatttgaccatttcacacagattaagaaaagtgtaaagataaaagaaagagagtgatacttttactgagttg 27820974  T
Q  206 cccttgtcattattttgaaactttttcacttttaagtaatg 246  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  27820973 cccttgtcattattttgaaactttttcacttttaagtaatg 27820933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 109 - 246
Target Start/End: Original strand, 38069898 - 38070035
Alignment:
Q  109 tccctccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgagttaccc 208  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||       |||||||||||||||||||| |||||||||||||||||||| |||    
T  38069898 tccctccgtccttgaacaagtgacctatttgaccatttcacacagattaagaaaagtgtaaagatgaaagaaagatagtgatacttttactgagttgccc 38069997  T
Q  209 ttgtcattattttgaaactttttcacttttaagtaatg 246  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  38069998 ttgtcattattttgaaactttttcatttttaagtaatg 38070035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 105 - 246
Target Start/End: Complemental strand, 39907209 - 39907068
Alignment:
Q  105 ttactccctccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgagtt 204  Q
    ||||||||||||||||| |||||||||| ||||||||||||| |||||||||       |||||||||||||||||||||||||||||||||||||||||    
T  39907209 ttactccctccgtcccttaataagtgacttatttgaccattttacacagattaagaaaagtgtaaagatgaaagaaagagagtgatacttttactgagtt 39907110  T
Q  205 acccttgtcattattttgaaactttttcacttttaagtaatg 246  Q
     ||||| |||||||||||||| ||||||||||||||||||||    
T  39907109 gcccttatcattattttgaaattttttcacttttaagtaatg 39907068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 106 - 246
Target Start/End: Original strand, 12738366 - 12738506
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgagtta 205  Q
    ||||| |||||||||| ||||  ||||||||||||||||||||||||||||       |||||||||| ||||||||| | ||||| ||||||||| ||     
T  12738366 tactctctccgtccctcaatacttgacctatttgaccatttcacacagattaagaaaagtgtaaagataaaagaaagataatgatatttttactgaattg 12738465  T
Q  206 cccttgtcattattttgaaactttttcacttttaagtaatg 246  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  12738466 cccttgtcattattttgaaactttttcacttttaagtaatg 12738506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 244 - 363
Target Start/End: Complemental strand, 27820900 - 27820778
Alignment:
Q  244 atggtgaccacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatattttttataaa-- 341  Q
    |||| ||||||||||||||||||||| | |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| |||      
T  27820900 atggggaccacaaaaagtatttataaggggtaaatctgtcaaattttgcttagaaatctgagaaggtcaagtattgtgggacaaatattttttacaaata 27820801  T
Q  342 -gtcacttatttagggacggagg 363  Q
     |||||||||| |||||| ||||    
T  27820800 ggtcacttattcagggacagagg 27820778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 244 - 364
Target Start/End: Complemental strand, 17493653 - 17493530
Alignment:
Q  244 atggtgaccacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatattttttataaa-- 341  Q
    |||| ||||||||||||||||||||| | ||||||||||||||||||  |||||||| ||||||| |||||||||||||||||||||||||||| |||      
T  17493653 atggggaccacaaaaagtatttataaggggtaaatctgtcaaattttgtttagaaatctgagaagatcaagtattgtgggacaaatattttttacaaata 17493554  T
Q  342 -gtcacttatttagggacggagga 364  Q
     |||||||||| ||||||||||||    
T  17493553 ggtcacttattcagggacggagga 17493530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 249 - 364
Target Start/End: Complemental strand, 39907032 - 39906915
Alignment:
Q  249 gaccacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatattttt-tataaag-tcac 346  Q
    ||||||||||||||||||||| | |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| || | || ||||    
T  39907032 gaccacaaaaagtatttataaggggtaaatctgtcaaattttgcttagaaatctgagaaggtcaagtattgtgggacaaatatttttataaatagatcac 39906933  T
Q  347 ttatttagggacggagga 364  Q
    ||||| ||||||||||||    
T  39906932 ttattcagggacggagga 39906915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 244 - 363
Target Start/End: Complemental strand, 11254627 - 11254505
Alignment:
Q  244 atggtgaccacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatattttttataaa-- 341  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||| |||||||||||||||||||||| | ||||||| |||      
T  11254627 atggggaccacaaaaagtatttataaagggtaaatctgtcaaattttgcttagaaatctgataaggtcaagtattgtgggacaatttttttttacaaata 11254528  T
Q  342 -gtcacttatttagggacggagg 363  Q
     |||||||||| |||||||||||    
T  11254527 ggtcacttattcagggacggagg 11254505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 244 - 363
Target Start/End: Original strand, 38070068 - 38070190
Alignment:
Q  244 atggtgaccacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatattttttataaa-- 341  Q
    |||| ||||||||||||||||||||| | |||||||||||||||||| | ||||||| |||||||||||||||||||||||||||||||||||| |||      
T  38070068 atggggaccacaaaaagtatttataatgggtaaatctgtcaaattttgcctagaaatctgagaaggtcaagtattgtgggacaaatattttttacaaata 38070167  T
Q  342 -gtcacttatttagggacggagg 363  Q
     |||||||||| |||||| ||||    
T  38070168 ggtcacttattcagggacagagg 38070190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 106 - 226
Target Start/End: Complemental strand, 11147949 - 11147829
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgagtta 205  Q
    |||||||||||||||||||||||||||||| |||| |||||||||||||||       ||||||||||||||| |||||| ||||| ||||||||| ||     
T  11147949 tactccctccgtccctgaataagtgacctacttgatcatttcacacagattaagaaaagtgtaaagatgaaaggaagagaatgatatttttactgaattg 11147850  T
Q  206 cccttgtcattattttgaaac 226  Q
    ||||| | |||||||| ||||    
T  11147849 cccttattattatttttaaac 11147829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 250 - 336
Target Start/End: Original strand, 17336149 - 17336235
Alignment:
Q  250 accacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatatttttt 336  Q
    |||||||||||||||||||| | |||||||||||||||| | ||||||||| | ||||||||||||||| |||||||||||||||||    
T  17336149 accacaaaaagtatttataaggggtaaatctgtcaaattctgcttagaaatctaagaaggtcaagtattatgggacaaatatttttt 17336235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 165 - 246
Target Start/End: Original strand, 17336029 - 17336110
Alignment:
Q  165 tgtaaagatgaaagaaagagagtgatacttttactgagttacccttgtcattattttgaaactttttcacttttaagtaatg 246  Q
    ||||||||||||||||||||| ||||| |||||||||  |  ||||||||||||||||||||||||||||||||||||||||    
T  17336029 tgtaaagatgaaagaaagagaatgatatttttactgaactgtccttgtcattattttgaaactttttcacttttaagtaatg 17336110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 244 - 363
Target Start/End: Complemental strand, 18575155 - 18575033
Alignment:
Q  244 atggtgaccacaaaaagtatttataaagag-taaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatattttttataaa- 341  Q
    |||| ||||||||||||||||||||| ||| ||||| ||||||||||| ||||||||| |||||||||| ||||||||||||||| | ||||||| |||     
T  18575155 atggggaccacaaaaagtatttataa-gagataaatttgtcaaattttgcttagaaatctgagaaggtcgagtattgtgggacaatttttttttacaaat 18575057  T
Q  342 --gtcacttatttagggacggagg 363  Q
      |||||||||| |||||||||||    
T  18575056 aggtcacttattcagggacggagg 18575033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 249 - 341
Target Start/End: Complemental strand, 9753892 - 9753800
Alignment:
Q  249 gaccacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatattttttataaa 341  Q
    ||||||||||| |||||||||   |||||| ||||||||| | ||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  9753892 gaccacaaaaaatatttataagaggtaaatttgtcaaattctgcttagaaatttgagaaggtcaagtattatgggacaaatattttttttaaa 9753800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 105 - 246
Target Start/End: Complemental strand, 9754070 - 9753930
Alignment:
Q  105 ttactccctccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgagtt 204  Q
    ||||||||||||||||| ||||  ||||||| ||||||||||||||||||||       |||||||||||||||||||| | ||||| ||||||||| ||    
T  9754070 ttactccctccgtccctcaatacttgacctacttgaccatttcacacagattaagaaaagtgtaaagatgaaagaaagataatgatatttttactgaatt 9753971  T
Q  205 acccttg-tcattattttgaaactttttcacttttaagtaatg 246  Q
      ||||| | |||||||||||||   |||||||||||||||||    
T  9753970 gtccttgttaattattttgaaac--cttcacttttaagtaatg 9753930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 249 - 336
Target Start/End: Original strand, 13243724 - 13243811
Alignment:
Q  249 gaccacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatatttttt 336  Q
    ||||||||||||||||||||| | || ||| ||||||||| | |||||||||||||||||||||| ||||||| |||| |||||||||    
T  13243724 gaccacaaaaagtatttataaggggtgaatttgtcaaattctgcttagaaatttgagaaggtcaaatattgtgagacatatatttttt 13243811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 252 - 336
Target Start/End: Original strand, 12738547 - 12738631
Alignment:
Q  252 cacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatatttttt 336  Q
    |||||||| ||||||||| | |||||| ||||||||| | ||||||||| ||| ||||||||||||| |||||||||||||||||    
T  12738547 cacaaaaaatatttataaggggtaaatttgtcaaattctgcttagaaatctgataaggtcaagtattatgggacaaatatttttt 12738631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 105 - 139
Target Start/End: Original strand, 18575027 - 18575061
Alignment:
Q  105 ttactccctccgtccctgaataagtgacctatttg 139  Q
    |||||||||||||||||||||||||||||||||||    
T  18575027 ttactccctccgtccctgaataagtgacctatttg 18575061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 106 - 139
Target Start/End: Original strand, 11254500 - 11254533
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttg 139  Q
    ||||||||||||||||||||||||||||||||||    
T  11254500 tactccctccgtccctgaataagtgacctatttg 11254533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 105 - 139
Target Start/End: Complemental strand, 38070196 - 38070162
Alignment:
Q  105 ttactccctccgtccctgaataagtgacctatttg 139  Q
    |||||||||| ||||||||||||||||||||||||    
T  38070196 ttactccctctgtccctgaataagtgacctatttg 38070162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 246
Target Start/End: Original strand, 13243575 - 13243686
Alignment:
Q  134 tatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgagttacccttg-tcattattttgaaactttttc 232  Q
    |||||||||||||||||| ||||       |||||||||| ||||||||| | ||||| ||||||||| ||  ||||| | |||||||||||||   |||    
T  13243575 tatttgaccatttcacaccgattaagaaaagtgtaaagataaaagaaagataatgatatttttactgaattgtccttgttaattattttgaaac--cttc 13243672  T
Q  233 acttttaagtaatg 246  Q
    | ||||||||||||    
T  13243673 atttttaagtaatg 13243686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 106 - 139
Target Start/End: Original strand, 17493526 - 17493559
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttg 139  Q
    |||| |||||||||||||||||||||||||||||    
T  17493526 tacttcctccgtccctgaataagtgacctatttg 17493559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 106 - 139
Target Start/End: Original strand, 27820773 - 27820806
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttg 139  Q
    ||||||||| ||||||||||||||||||||||||    
T  27820773 tactccctctgtccctgaataagtgacctatttg 27820806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 105 - 141
Target Start/End: Complemental strand, 1581027 - 1580991
Alignment:
Q  105 ttactccctccgtccctgaataagtgacctatttgac 141  Q
    ||||||||||||||||||||||| ||||||| |||||    
T  1581027 ttactccctccgtccctgaataaatgacctagttgac 1580991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 108; Significance: 5e-54; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 106 - 246
Target Start/End: Complemental strand, 50777297 - 50777157
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgagtta 205  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||       |||||||||| ||||||||||||||||||||||||||||||     
T  50777297 tactccctccgtcccttaataagtgacctatttgaccatttcacacagattaagaaaagtgtaaagataaaagaaagagagtgatacttttactgagttg 50777198  T
Q  206 cccttgtcattattttgaaactttttcacttttaagtaatg 246  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  50777197 cccttgtcattattttgaaactttttcacttttaagtaatg 50777157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 103 - 246
Target Start/End: Original strand, 1929214 - 1929357
Alignment:
Q  103 tattactccctccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgag 202  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||||||||||       |||||||||||||||||| ||||||||||||||||||||    
T  1929214 tattactccctccgtccctgaataagtgacatatttgatcatttcacacagattaagaaaagtgtaaagatgaaagaaaaagagtgatacttttactgag 1929313  T
Q  203 ttacccttgtcattattttgaaactttttcacttttaagtaatg 246  Q
    || |||||||||||||||||||||||||||||||||||||||||    
T  1929314 ttgcccttgtcattattttgaaactttttcacttttaagtaatg 1929357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 106 - 246
Target Start/End: Complemental strand, 46862856 - 46862716
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgagtta 205  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||       |||||||||| |||||||||||||||||||||| |||||||     
T  46862856 tactccctccgtcccttaataagtgacctatttgaccatttcacacagattaagaaaagtgtaaagataaaagaaagagagtgatacttttcctgagttg 46862757  T
Q  206 cccttgtcattattttgaaactttttcacttttaagtaatg 246  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  46862756 cccttgtcattattttgaaactttttcacttttaagtaatg 46862716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 109 - 246
Target Start/End: Original strand, 39150900 - 39151037
Alignment:
Q  109 tccctccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgagttaccc 208  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||||        ||||||||| ||||||||||| |||||||||||||||||| |||    
T  39150900 tccctccgtcccttaataagtgatctatttgaccatttcacacagattaagaaaaatgtaaagataaaagaaagagaatgatacttttactgagttgccc 39150999  T
Q  209 ttgtcattattttgaaactttttcacttttaagtaatg 246  Q
    ||||||||||||||||||||||||||||||||||||||    
T  39151000 ttgtcattattttgaaactttttcacttttaagtaatg 39151037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 17 - 107
Target Start/End: Complemental strand, 37526385 - 37526295
Alignment:
Q  17 attctcaaagagcagcaatattgggaacttatttaaatttgaactctaattgctatttttattattgatgagcaatattgtatttttatta 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37526385 attctcaaagagcagcaatattgggaacttatttaaatttgaactctaattgctatttttattattgatgagcaatattgtatttttatta 37526295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 106 - 246
Target Start/End: Complemental strand, 38321941 - 38321805
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgagtta 205  Q
    |||||||| | ||||| ||||||||||||||    ||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||     
T  38321941 tactcccttcatcccttaataagtgacctat----ccatttcacacagattaagaaaagtgtaaagatgaaagaaagagagtgatacttttactgagttg 38321846  T
Q  206 cccttgtcattattttgaaactttttcacttttaagtaatg 246  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  38321845 cccttgtcattattttgaaactttttcacttttaagtaatg 38321805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 110 - 233
Target Start/End: Complemental strand, 46371217 - 46371094
Alignment:
Q  110 ccctccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgagttaccct 209  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||| || ||||    
T  46371217 ccctccgtcccttaataagtgatctatttgaccatttcacacagattaagaaaagtgtaaagatgaaagaaagagagtgatacttttactgaattgccct 46371118  T
Q  210 tgtcattattttgaaactttttca 233  Q
    ||||||||||||||||||||||||    
T  46371117 tgtcattattttgaaactttttca 46371094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 106 - 246
Target Start/End: Original strand, 28036700 - 28036841
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatactttt-actgagtt 204  Q
    |||||||| ||||||| |||||||||| ||||||||||||||||||| |||       |||||||||| ||||||||||||||||| |||| ||||||||    
T  28036700 tactcccttcgtcccttaataagtgacttatttgaccatttcacacaaattaagaaaagtgtaaagataaaagaaagagagtgatattttttactgagtt 28036799  T
Q  205 acccttgtcattattttgaaactttttcacttttaagtaatg 246  Q
     |||||||||||||||||||||||||||||||||||||||||    
T  28036800 gcccttgtcattattttgaaactttttcacttttaagtaatg 28036841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 106 - 246
Target Start/End: Complemental strand, 32046133 - 32045993
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgagtta 205  Q
    |||||||||| || ||||||||||||  |||||||||||||||||||||||       ||||||| |||||||||||| |||||||||||||| |||||     
T  32046133 tactccctccatcactgaataagtgatttatttgaccatttcacacagattaagaaaagtgtaaaaatgaaagaaagaaagtgatacttttaccgagttg 32046034  T
Q  206 cccttgtcattattttgaaactttttcacttttaagtaatg 246  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  32046033 cccttgtcgttattttgaaactttttcacttttaagtaatg 32045993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 368 - 454
Target Start/End: Complemental strand, 37526274 - 37526188
Alignment:
Q  368 ttgaatagcggtggtaaatggtagtggtggtatagtaatgacaatgagtgagtgaagggaaagagaaattcgaaaaatggggggagt 454  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37526274 ttgaatagtggtggtaaatggtagtggtggtatagtaatgacaatgagtgagtgaagggaaagagaaattcgaaaaatggggggagt 37526188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 244 - 363
Target Start/End: Original strand, 1929389 - 1929511
Alignment:
Q  244 atggtgaccacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatattttttataaa-- 341  Q
    |||| ||||||||||| ||||||||| | |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| |||      
T  1929389 atggggaccacaaaaaatatttataaggggtaaatctgtcaaattttgcttagaaatatgagaaggtcaagtattgtgggacaaatattttttacaaata 1929488  T
Q  342 -gtcacttatttagggacggagg 363  Q
     ||||||||||||||||||||||    
T  1929489 ggtcacttatttagggacggagg 1929511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 106 - 246
Target Start/End: Original strand, 1207452 - 1207592
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgagtta 205  Q
    |||||||||||||||| ||||  ||||||| ||||||||||||||||||||       ||||| |||||||||||||| | ||||| ||||||||| ||     
T  1207452 tactccctccgtcccttaatacttgacctacttgaccatttcacacagattaagaaaagtgtagagatgaaagaaagataatgatatttttactgaattg 1207551  T
Q  206 cccttgtcattattttgaaactttttcacttttaagtaatg 246  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  1207552 cccttgtcattattttgaaactttttcacttttaagtaatg 1207592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 249 - 363
Target Start/End: Complemental strand, 46371049 - 46370932
Alignment:
Q  249 gaccacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatattttttataaa---gtca 345  Q
    ||||||||||||||||||||| | |||||| ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| |||   ||||    
T  46371049 gaccacaaaaagtatttataaggggtaaatttgtcaaattttgcttagaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtca 46370950  T
Q  346 cttatttagggacggagg 363  Q
    |||||| |||||||||||    
T  46370949 cttattcagggacggagg 46370932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 108 - 246
Target Start/End: Complemental strand, 8229362 - 8229223
Alignment:
Q  108 ctccctccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaaga-gagtgatacttttactgagttac 206  Q
    ||||||| ||| ||||||||||||  |||||||||||||||||||||||       |||||||||||||| ||| | |||||||| |||||||||||| |    
T  8229362 ctccctcggtctctgaataagtgatttatttgaccatttcacacagattaagaaaagtgtaaagatgaaaaaaaaaagagtgatatttttactgagttgc 8229263  T
Q  207 ccttgtcattattttgaaactttttcacttttaagtaatg 246  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  8229262 ccttgtcattattttaaaactttttcacttttaagtaatg 8229223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 249 - 362
Target Start/End: Original strand, 39151075 - 39151191
Alignment:
Q  249 gaccacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatattttttataaa---gtca 345  Q
    ||||||||||||||||||||| | |||||||||||||||||| ||||||||| | |||||||||||||||||||||||||||||||||| |||   ||||    
T  39151075 gaccacaaaaagtatttataaggggtaaatctgtcaaattttgcttagaaatctaagaaggtcaagtattgtgggacaaatattttttacaaataggtca 39151174  T
Q  346 cttatttagggacggag 362  Q
    |||||| ||||||||||    
T  39151175 cttattcagggacggag 39151191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 244 - 363
Target Start/End: Original strand, 28036874 - 28036996
Alignment:
Q  244 atggtgaccacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatattttttataaa-- 341  Q
    |||| ||||||||||||||||||||| |  ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| |||      
T  28036874 atggggaccacaaaaagtatttataagggataaatctgtcaaattttgcttagaaatctgagaaggtcaagtattgtgggacaaatattttttacaaata 28036973  T
Q  342 -gtcacttatttagggacggagg 363  Q
     |||| ||||| |||||||||||    
T  28036974 ggtcatttattaagggacggagg 28036996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 106 - 246
Target Start/End: Original strand, 40562436 - 40562574
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgagtta 205  Q
    |||||||||||||||| ||||  ||||||| ||||||||||||||||||||       |||||||||||||||||||||| ||||| ||||||||| ||     
T  40562436 tactccctccgtccctcaatacttgacctacttgaccatttcacacagattaagaaaagtgtaaagatgaaagaaagagaatgatatttttactgaattg 40562535  T
Q  206 cccttgtcattattttgaaactttttcacttttaagtaatg 246  Q
    ||||||| |||||||||||||||||  ||||||||||||||    
T  40562536 cccttgttattattttgaaactttt--acttttaagtaatg 40562574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 244 - 363
Target Start/End: Complemental strand, 46862683 - 46862561
Alignment:
Q  244 atggtgaccacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatattttttataaa-- 341  Q
    |||| ||||||||||||||||||||| | |||||||||||||||||| |||| |||| | |||||||||||||||||||||||||||||||||| |||      
T  46862683 atggggaccacaaaaagtatttataaggggtaaatctgtcaaattttgcttaaaaatctaagaaggtcaagtattgtgggacaaatattttttacaaata 46862584  T
Q  342 -gtcacttatttagggacggagg 363  Q
     |||||||||| |||||||||||    
T  46862583 ggtcacttattcagggacggagg 46862561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 244 - 363
Target Start/End: Complemental strand, 32045960 - 32045838
Alignment:
Q  244 atggtgaccacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatattttttataaa-- 341  Q
    |||| ||||||||||||||||||||| | |||||||| ||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||| |||      
T  32045960 atggggaccacaaaaagtatttataaggggtaaatctttcaaattttgcttagaaatctgagaaggtcaagtattgtggaacaaatattttttacaaata 32045861  T
Q  342 -gtcacttatttagggacggagg 363  Q
      ||||||||| |||||||||||    
T  32045860 gatcacttattcagggacggagg 32045838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 244 - 359
Target Start/End: Complemental strand, 50777124 - 50777006
Alignment:
Q  244 atggtgaccacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatattttttata---a 340  Q
    |||| |||| |||||||||||||||| | |||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||||| |   |    
T  50777124 atggggaccccaaaaagtatttataaggggtaaatctgtcaaattttgcttagaaatttaagaaggtcaagtattatgggacaaatattttttacaaata 50777025  T
Q  341 agtcacttatttagggacg 359  Q
    |||||||||||||| ||||    
T  50777024 agtcacttatttagagacg 50777006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 244 - 363
Target Start/End: Complemental strand, 38321772 - 38321650
Alignment:
Q  244 atggtgaccacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatattttttataaa-- 341  Q
    |||| ||||||||||||||||||||| |  ||||||| | ||||||| ||||||||| |||||||||||||||||||||||||||||||||||| |||      
T  38321772 atggggaccacaaaaagtatttataagggttaaatcttttaaattttgcttagaaatctgagaaggtcaagtattgtgggacaaatattttttacaaata 38321673  T
Q  342 -gtcacttatttagggacggagg 363  Q
     |||| ||||| |||||||||||    
T  38321672 ggtcagttattcagggacggagg 38321650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 244 - 363
Target Start/End: Complemental strand, 8229190 - 8229068
Alignment:
Q  244 atggtgaccacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatattttttataaa-- 341  Q
    |||| ||||||||||||||||||||| | |||||| ||||||||||| |||| |||| | ||||||| |||||||| || ||||||||||||||||||      
T  8229190 atggggaccacaaaaagtatttataaggggtaaatttgtcaaattttgcttaaaaatctaagaaggttaagtattgaggaacaaatattttttataaata 8229091  T
Q  342 -gtcacttatttagggacggagg 363  Q
     |||||||||| |||||||||||    
T  8229090 ggtcacttattcagggacggagg 8229068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 244 - 336
Target Start/End: Complemental strand, 38817901 - 38817809
Alignment:
Q  244 atggtgaccacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatatttttt 336  Q
    |||| ||||||||||||||||||||| | |||||| | ||||||||| |||||||||||||||| ||||| |||| |||||||||||||||||    
T  38817901 atggggaccacaaaaagtatttataaggggtaaatttatcaaattttgcttagaaatttgagaaagtcaaatattatgggacaaatatttttt 38817809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 244 - 336
Target Start/End: Original strand, 40562607 - 40562699
Alignment:
Q  244 atggtgaccacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatatttttt 336  Q
    |||| ||||||||| ||||||||||| | |||||| | ||||||| | |||| |||| |||||| ||||||||||||||||||||||||||||    
T  40562607 atggagaccacaaagagtatttataaggggtaaatttatcaaattctgcttaaaaatatgagaatgtcaagtattgtgggacaaatatttttt 40562699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 256 - 336
Target Start/End: Original strand, 1207636 - 1207715
Alignment:
Q  256 aaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatatttttt 336  Q
    |||||||||||||| | |||||||||||||||| | ||||||||| ||||||||||||||||| |  ||||||||||||||    
T  1207636 aaaagtatttataagg-gtaaatctgtcaaattctgcttagaaatctgagaaggtcaagtattataagacaaatatttttt 1207715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 102 - 139
Target Start/End: Original strand, 46370923 - 46370960
Alignment:
Q  102 ttattactccctccgtccctgaataagtgacctatttg 139  Q
    ||||||||||||||||||||||||||||||||||||||    
T  46370923 ttattactccctccgtccctgaataagtgacctatttg 46370960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 103 - 139
Target Start/End: Original strand, 46862553 - 46862589
Alignment:
Q  103 tattactccctccgtccctgaataagtgacctatttg 139  Q
    |||||||||||||||||||||||||||||||||||||    
T  46862553 tattactccctccgtccctgaataagtgacctatttg 46862589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 106 - 138
Target Start/End: Original strand, 8229063 - 8229095
Alignment:
Q  106 tactccctccgtccctgaataagtgacctattt 138  Q
    |||||||||||||||||||||||||||||||||    
T  8229063 tactccctccgtccctgaataagtgacctattt 8229095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 244 - 336
Target Start/End: Original strand, 9129575 - 9129667
Alignment:
Q  244 atggtgaccacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatatttttt 336  Q
    |||| ||||||||||| ||||||||| | |||||| | ||||||| | |||| |||| ||||||||| || |||| || || |||||||||||    
T  9129575 atggagaccacaaaaaatatttataaggggtaaatttatcaaattctgcttaaaaatctgagaaggtaaaatattatgagataaatatttttt 9129667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 106 - 139
Target Start/End: Complemental strand, 1929516 - 1929483
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttg 139  Q
    |||||||||||||||| |||||||||||||||||    
T  1929516 tactccctccgtccctaaataagtgacctatttg 1929483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 106 - 246
Target Start/End: Original strand, 9129401 - 9129542
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatact---tttactgag 202  Q
    ||||||||| |||||| |||| ||||  || ||||| |||||||| |||||       |||||||||| ||||||||||| ||||| |   |||||| |     
T  9129401 tactccctcggtccctcaatacgtgatatacttgactatttcacaaagattaacaaaagtgtaaagataaaagaaagagaatgataatatttttactcaa 9129500  T
Q  203 ttacccttgtcattattttgaaactttttcacttttaagtaatg 246  Q
    ||  |||||| |||||||| |||||||  |||||||||||||||    
T  9129501 ttgtccttgttattatttttaaacttt--cacttttaagtaatg 9129542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 106 - 139
Target Start/End: Original strand, 32045833 - 32045866
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttg 139  Q
    |||||||||||||||||||||||||| |||||||    
T  32045833 tactccctccgtccctgaataagtgatctatttg 32045866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 106 - 139
Target Start/End: Original strand, 38321645 - 38321678
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttg 139  Q
    |||||||||||||||||||||| |||||||||||    
T  38321645 tactccctccgtccctgaataactgacctatttg 38321678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 106 - 139
Target Start/End: Complemental strand, 39151197 - 39151164
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttg 139  Q
    ||||| ||||||||||||||||||||||||||||    
T  39151197 tactctctccgtccctgaataagtgacctatttg 39151164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 107; Significance: 2e-53; HSPs: 3)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 103 - 246
Target Start/End: Original strand, 10590 - 10733
Alignment:
Q  103 tattactccctccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgag 202  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| | |||       |||||||||||||||||||||||||||||||||||||||    
T  10590 tattactccctccgtccctgaataagtgacctatttgaccattccacataaattaagaaaagtgtaaagatgaaagaaagagagtgatacttttactgag 10689  T
Q  203 ttacccttgtcattattttgaaactttttcacttttaagtaatg 246  Q
    || |||||||||||||||||||||||||||||||||||||||||    
T  10690 ttgcccttgtcattattttgaaactttttcacttttaagtaatg 10733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 244 - 363
Target Start/End: Original strand, 10766 - 10888
Alignment:
Q  244 atggtgaccacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatattttttataaa-- 341  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||| |||||||||||||||||||||| | ||||||| |||      
T  10766 atggggaccacaaaaagtatttataaagggtaaatctgtcaaattttgcttagaaatctgataaggtcaagtattgtgggacaatttttttttacaaata 10865  T
Q  342 -gtcacttatttagggacggagg 363  Q
     |||||||||| |||||||||||    
T  10866 ggtcacttattcagggacggagg 10888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 106 - 139
Target Start/End: Complemental strand, 10893 - 10860
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttg 139  Q
    ||||||||||||||||||||||||||||||||||    
T  10893 tactccctccgtccctgaataagtgacctatttg 10860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 105; Significance: 3e-52; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 101 - 246
Target Start/End: Original strand, 28541582 - 28541727
Alignment:
Q  101 tttattactccctccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactg 200  Q
    |||| |||||||||||||||| |||||||||||||||||||||||| |||||||||       |||||||||||||||||||||||||||||||||||||    
T  28541582 tttagtactccctccgtccctaaataagtgacctatttgaccattttacacagattaagaaaagtgtaaagatgaaagaaagagagtgatacttttactg 28541681  T
Q  201 agttacccttgtcattattttgaaactttttcacttttaagtaatg 246  Q
     ||| |||||||||||||||||||||||||||||||||||||||||    
T  28541682 ggttgcccttgtcattattttgaaactttttcacttttaagtaatg 28541727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 106 - 246
Target Start/End: Complemental strand, 12350572 - 12350432
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgagtta 205  Q
    |||||||||||||| | ||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||| |||||||||||||     
T  12350572 tactccctccgtccataaataagtgacctatttgaccatttcacacagattaagaaaagtgtaaagatgaaagaaagagagtgatgcttttactgagttg 12350473  T
Q  206 cccttgtcattattttgaaactttttcacttttaagtaatg 246  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  12350472 cccttgtcattattttgaaactttttcacttttaagtaatg 12350432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 105 - 246
Target Start/End: Complemental strand, 16436076 - 16435939
Alignment:
Q  105 ttactccctccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgagtt 204  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||       |||||||||||||||||||    ||||||||||||||||||    
T  16436076 ttactccctccgtccctgaataagtgacctatttgagcatttcacacagattaagaaaagtgtaaagatgaaagaaag----tgatacttttactgagtt 16435981  T
Q  205 acccttgtcattattttgaaactttttcacttttaagtaatg 246  Q
     |||||||||||||||||||||||||||||||||||||||||    
T  16435980 gcccttgtcattattttgaaactttttcacttttaagtaatg 16435939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 115 - 246
Target Start/End: Complemental strand, 29182882 - 29182751
Alignment:
Q  115 cgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgagttacccttgtca 214  Q
    ||||| |||||||||||| |||||||||||||||||||||||        ||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  29182882 cgtccttgaataagtgacatatttgaccatttcacacagattaagaaaaatgtaaagatgaaagaaagagagtgatatttttactgagttgcccttgtca 29182783  T
Q  215 ttattttgaaactttttcacttttaagtaatg 246  Q
    ||||||||||||||||||||||||||||||||    
T  29182782 ttattttgaaactttttcacttttaagtaatg 29182751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 250 - 364
Target Start/End: Complemental strand, 16435900 - 16435783
Alignment:
Q  250 accacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatattttttata---aagtcac 346  Q
    |||||||||||||||||||  | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |   ||||||     
T  16435900 accacaaaaagtatttatatggggtaaatctgtcaaattttccttagaaatttgagaaggtcaagtattgtgggacaaatattttttacaaataagtcat 16435801  T
Q  347 ttatttagggacggagga 364  Q
    ||||||||||||||||||    
T  16435800 ttatttagggacggagga 16435783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 105 - 246
Target Start/End: Complemental strand, 30736720 - 30736579
Alignment:
Q  105 ttactccctccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgagtt 204  Q
    |||||||||||||| || ||||  |||||||||| || ||||||||||||||       |||||||||||||||||||||| ||||| ||||||||| ||    
T  30736720 ttactccctccgtctctcaatacttgacctatttaactatttcacacagattaagaaaagtgtaaagatgaaagaaagagaatgatatttttactgaatt 30736621  T
Q  205 acccttgtcattattttgaaactttttcacttttaagtaatg 246  Q
      ||||||||||||||||||||||||||||||||||||||||    
T  30736620 gtccttgtcattattttgaaactttttcacttttaagtaatg 30736579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 106 - 246
Target Start/End: Complemental strand, 1241408 - 1241269
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgagtta 205  Q
    |||||||||||||||||||||||| | |||||| | ||||||||||| |||        |||||| |||||||||||| ||||||||||||||||||||     
T  1241408 tactccctccgtccctgaataagtaatctatttcatcatttcacacaaattaagaaaaatgtaaaaatgaaagaaagaaagtgatacttttactgagttg 1241309  T
Q  206 cccttgtcattattttgaaactttttcacttttaagtaatg 246  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  1241308 cccttgtcattattttgaaactttttca-ttttaagtaatg 1241269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 249 - 363
Target Start/End: Complemental strand, 13042094 - 13041977
Alignment:
Q  249 gaccacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatattttttataaa---gtca 345  Q
    ||||||||||||||||||||| | |||||||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||| |||   ||||    
T  13042094 gaccacaaaaagtatttataaggggtaaatctgtcaaattttgcttaaaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtca 13041995  T
Q  346 cttatttagggacggagg 363  Q
    |||||| | |||||||||    
T  13041994 cttattcaaggacggagg 13041977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 100 - 246
Target Start/End: Original strand, 31013489 - 31013635
Alignment:
Q  100 ttttattactccctccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttact 199  Q
    |||| ||||||| ||||||||| ||||  |||||||||||||||||||| |||||||       ||||||| | |||||||||| | ||||| |||||||    
T  31013489 tttttttactccttccgtccctcaatacttgacctatttgaccatttcatacagattaagaaaagtgtaaaaacgaaagaaagataatgatatttttact 31013588  T
Q  200 gagttacccttgtcattattttgaaactttttcacttttaagtaatg 246  Q
    || || ||||| |||||||||||||||||||||||||||||||||||    
T  31013589 gaattgcccttatcattattttgaaactttttcacttttaagtaatg 31013635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 244 - 363
Target Start/End: Complemental strand, 1241236 - 1241114
Alignment:
Q  244 atggtgaccacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatattttttataaa-- 341  Q
    |||| |||||||||||||||||||||   |||||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||||| |||      
T  1241236 atggggaccacaaaaagtatttataagaggtaaatctgtcaaattttgcttagaaatctgagaagttcaagtattgtgggacaaatattttttacaaata 1241137  T
Q  342 -gtcacttatttagggacggagg 363  Q
      ||||||||| |||||||||||    
T  1241136 gatcacttattcagggacggagg 1241114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 249 - 364
Target Start/End: Complemental strand, 12350394 - 12350276
Alignment:
Q  249 gaccacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatattttttataaa---gtca 345  Q
    ||||||||||||||| ||||| | |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||| |||   ||||    
T  12350394 gaccacaaaaagtatatataaggggtaaatctgtcaaattttgcttagaaatttgagaaggtcaaatattgtgggacaaatactttttacaaataggtca 12350295  T
Q  346 cttatttagggacggagga 364  Q
    |||||| || |||||||||    
T  12350294 cttattcagagacggagga 12350276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 108 - 246
Target Start/End: Complemental strand, 13042268 - 13042132
Alignment:
Q  108 ctccctccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgagttacc 207  Q
    |||||||||||| ||||||||||| ||||||||  ||||||||||||||       |||||||||||||||||||||||||||| |||||||||||| ||    
T  13042268 ctccctccgtccttgaataagtgatctatttgattatttcacacagattaaaaaa-gtgtaaagatgaaagaaagagagtgatatttttactgagttgcc 13042170  T
Q  208 cttgtcattattttgaaactttttcacttttaagtaatg 246  Q
    |||||||||| ||| |||  |||||||||||||||||||    
T  13042169 cttgtcatta-tttaaaaaattttcacttttaagtaatg 13042132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 244 - 363
Target Start/End: Original strand, 28541760 - 28541882
Alignment:
Q  244 atggtgaccacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatattttttata---a 340  Q
    |||| ||||||||||||||||||||| | |||||||||||||||||| | ||||||| ||||||||||||||||||||||| |||||||||||| |   |    
T  28541760 atggggaccacaaaaagtatttataaggggtaaatctgtcaaattttgcctagaaatctgagaaggtcaagtattgtgggataaatattttttacaaata 28541859  T
Q  341 agtcacttatttagggacggagg 363  Q
    ||||||||||| || ||||||||    
T  28541860 agtcacttattcagagacggagg 28541882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 137 - 246
Target Start/End: Original strand, 7271109 - 7271218
Alignment:
Q  137 ttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgagttacccttgtcattattttgaaactttttcactt 236  Q
    ||||| ||||||||||||||       |||||||||||||||||| ||| ||||| ||||||||| || |||||||||||||||||||||||||||||||    
T  7271109 ttgacaatttcacacagattaagaaaagtgtaaagatgaaagaaatagaatgatatttttactgaattgcccttgtcattattttgaaactttttcactt 7271208  T
Q  237 ttaagtaatg 246  Q
    ||||||||||    
T  7271209 ttaagtaatg 7271218  T

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Target: chr6; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 249 - 363
Target Start/End: Complemental strand, 29182713 - 29182596
Alignment:
Q  249 gaccacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatattttttataaa---gtca 345  Q
    |||||||||| ||||||||||   |||||||||||||||||| | ||||||| ||||||||||||||||||| |||||||||||||||| |||   ||||    
T  29182713 gaccacaaaatgtatttataagaggtaaatctgtcaaattttgcctagaaatctgagaaggtcaagtattgtaggacaaatattttttacaaataggtca 29182614  T
Q  346 cttatttagggacggagg 363  Q
    |||||| |||||| ||||    
T  29182613 cttattcagggacagagg 29182596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 253 - 336
Target Start/End: Complemental strand, 30736537 - 30736454
Alignment:
Q  253 acaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatatttttt 336  Q
    ||||||||||||||||| | |||||||||||||||||| ||||||||| ||||||| |||| ||||||||||||||||||||||    
T  30736537 acaaaaagtatttataaggggtaaatctgtcaaattttgcttagaaatctgagaagatcaaatattgtgggacaaatatttttt 30736454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 244 - 336
Target Start/End: Original strand, 7271251 - 7271343
Alignment:
Q  244 atggtgaccacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatatttttt 336  Q
    |||| ||| ||||||||||||||||| | |||||||||||||||| | ||||||||| | ||||||||||||||| |||||||||||||||||    
T  7271251 atggggacaacaaaaagtatttataaggggtaaatctgtcaaattctgcttagaaatctaagaaggtcaagtattatgggacaaatatttttt 7271343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 252 - 336
Target Start/End: Complemental strand, 1870653 - 1870569
Alignment:
Q  252 cacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatatttttt 336  Q
    |||||||||||||||||| | |||||| ||||||||| | |||| |||| ||||||||||||||||||| | |||||||||||||    
T  1870653 cacaaaaagtatttataaggggtaaatttgtcaaattctgcttaaaaatctgagaaggtcaagtattgttgaacaaatatttttt 1870569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 244 - 325
Target Start/End: Complemental strand, 13210471 - 13210390
Alignment:
Q  244 atggtgaccacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggac 325  Q
    |||| ||||||||||| ||||||||| | |||||| ||||||||| | |||| ||||||||||||||||||||||| |||||    
T  13210471 atggagaccacaaaaaatatttataatgggtaaatttgtcaaattctgcttaaaaatttgagaaggtcaagtattgagggac 13210390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 251 - 336
Target Start/End: Original strand, 31013675 - 31013760
Alignment:
Q  251 ccacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatatttttt 336  Q
    ||||||||| ||||||||| |  |||||| |||||||| | ||||||||| ||||||| ||||||||||||| |||||||||||||    
T  31013675 ccacaaaaaatatttataagggataaatccgtcaaattctgcttagaaatctgagaagatcaagtattgtggaacaaatatttttt 31013760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 253 - 336
Target Start/End: Original strand, 31833747 - 31833830
Alignment:
Q  253 acaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatatttttt 336  Q
    ||||||||||||| ||| |  ||||| ||||||||| | |||| |||| |||||||||||||||| ||||||||||||||||||    
T  31833747 acaaaaagtatttttaagggataaatttgtcaaattatgcttaaaaatctgagaaggtcaagtatcgtgggacaaatatttttt 31833830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 137 - 244
Target Start/End: Complemental strand, 13210610 - 13210506
Alignment:
Q  137 ttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgagttacccttgtcattattttgaaactttttcactt 236  Q
    ||||||||||||||||||||       |||||||||||||||||||||| ||||  ||||||||| |  ||||||| | |||||||||||  ||||||||    
T  13210610 ttgaccatttcacacagattaagaaaagtgtaaagatgaaagaaagagaatgattattttactgaatcgcccttgtta-tattttgaaac--tttcactt 13210514  T
Q  237 ttaagtaa 244  Q
    ||||||||    
T  13210513 ttaagtaa 13210506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 167 - 246
Target Start/End: Complemental strand, 1870771 - 1870694
Alignment:
Q  167 taaagatgaaagaaagagagtgatacttttactgagttacccttgtcattattttgaaactttttcacttttaagtaatg 246  Q
    |||||||||||||||| || ||||| ||||||| | || ||||||| ||||||||||| |   |||||||||||||||||    
T  1870771 taaagatgaaagaaagggaatgatatttttactaaattgcccttgttattattttgaagc--cttcacttttaagtaatg 1870694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 141
Target Start/End: Original strand, 18991904 - 18991939
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttgac 141  Q
    |||||||||||||||||||||||||||||| |||||    
T  18991904 tactccctccgtccctgaataagtgacctagttgac 18991939  T

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Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 104 - 142
Target Start/End: Complemental strand, 2913160 - 2913122
Alignment:
Q  104 attactccctccgtccctgaataagtgacctatttgacc 142  Q
    |||||||||||||||||| ||||||||||||| ||||||    
T  2913160 attactccctccgtcccttaataagtgacctagttgacc 2913122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 106 - 139
Target Start/End: Original strand, 1241109 - 1241142
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttg 139  Q
    |||||||||||||||||||||||||| |||||||    
T  1241109 tactccctccgtccctgaataagtgatctatttg 1241142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 106 - 139
Target Start/End: Original strand, 13041972 - 13042005
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttg 139  Q
    |||||||||||||| |||||||||||||||||||    
T  13041972 tactccctccgtccttgaataagtgacctatttg 13042005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 106 - 139
Target Start/End: Original strand, 29182591 - 29182624
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttg 139  Q
    ||||||||| ||||||||||||||||||||||||    
T  29182591 tactccctctgtccctgaataagtgacctatttg 29182624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 104; Significance: 1e-51; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 106 - 246
Target Start/End: Original strand, 40232115 - 40232255
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgagtta 205  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||||||       |||||||||| ||||||||||||||||||||||||||||||     
T  40232115 tactccctccgtcccttaataagtgatctatttgaccatttcacacagattaagaaaagtgtaaagataaaagaaagagagtgatacttttactgagttg 40232214  T
Q  206 cccttgtcattattttgaaactttttcacttttaagtaatg 246  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  40232215 cccttgtcattattttgaaactttttcacttttaagtaatg 40232255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 104 - 246
Target Start/End: Complemental strand, 4041249 - 4041107
Alignment:
Q  104 attactccctccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgagt 203  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||||||||       ||||||||||||||||||| ||||||||||||||||||||    
T  4041249 attactccctccgtcccttaataagtgacatatttgaccatttcacacagattaagaaaagtgtaaagatgaaagaaagggagtgatacttttactgagt 4041150  T
Q  204 tacccttgtcattattttgaaactttttcacttttaagtaatg 246  Q
    |  ||||||||||||||||||||||||||||||||||||||||    
T  4041149 tgtccttgtcattattttgaaactttttcacttttaagtaatg 4041107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 105 - 246
Target Start/End: Original strand, 27596085 - 27596226
Alignment:
Q  105 ttactccctccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgagtt 204  Q
    ||||||||||||||||| |||||||||| ||||||||||||| |||||||||       ||||||||||||||||||||||||||||||||||||| |||    
T  27596085 ttactccctccgtccctaaataagtgacttatttgaccattttacacagattaagaaaagtgtaaagatgaaagaaagagagtgatacttttactgggtt 27596184  T
Q  205 acccttgtcattattttgaaactttttcacttttaagtaatg 246  Q
     |||||||||||||||||||||||||||||||||||||||||    
T  27596185 gcccttgtcattattttgaaactttttcacttttaagtaatg 27596226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 106 - 246
Target Start/End: Complemental strand, 6392571 - 6392431
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgagtta 205  Q
    |||||||||||||| |||||||||||| ||||| |||||||||||||||||       |||||||||||||||||||||||||||||||||||| ||||     
T  6392571 tactccctccgtccttgaataagtgacatattttaccatttcacacagattaagaaaagtgtaaagatgaaagaaagagagtgatacttttactaagttg 6392472  T
Q  206 cccttgtcattattttgaaactttttcacttttaagtaatg 246  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  6392471 cccttgtcattattttgaaactttttcacttttaagtaatg 6392431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 114 - 240
Target Start/End: Original strand, 31689361 - 31689487
Alignment:
Q  114 ccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgagttacccttgtc 213  Q
    |||||||| |||||||||| ||||| |||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  31689361 ccgtccctaaataagtgacatatttcaccatttcacacagattaagaaaagtgtaaagatgaaagaaagagagtgatacttttactgagttgcccttgtc 31689460  T
Q  214 attattttgaaactttttcacttttaa 240  Q
    |||||||||||||||||||||||||||    
T  31689461 attattttgaaactttttcacttttaa 31689487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 106 - 246
Target Start/End: Original strand, 25943649 - 25943787
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgagtta 205  Q
    ||||||||||||||||||||||||||||||||||| |||||||||  ||||        ||||||||||||||||||||||||||||||||||||| ||     
T  25943649 tactccctccgtccctgaataagtgacctatttgatcatttcaca--gattaagaaaattgtaaagatgaaagaaagagagtgatacttttactgaattg 25943746  T
Q  206 cccttgtcattattttgaaactttttcacttttaagtaatg 246  Q
    || ||||||||||||||||||||||||||||||||||||||    
T  25943747 ccattgtcattattttgaaactttttcacttttaagtaatg 25943787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 117 - 246
Target Start/End: Complemental strand, 29737694 - 29737565
Alignment:
Q  117 tccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgagttacccttgtcatt 216  Q
    ||||| |||||||||| |||||||||||||||||||||||       ||||||| || |||||||||||||||||||||||||||||| |||||||||||    
T  29737694 tcccttaataagtgacttatttgaccatttcacacagattaagaaaagtgtaaaaataaaagaaagagagtgatacttttactgagttgcccttgtcatt 29737595  T
Q  217 attttgaaactttttcacttttaagtaatg 246  Q
    ||||||||||||||||||||||||||||||    
T  29737594 attttgaaactttttcacttttaagtaatg 29737565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 244 - 363
Target Start/End: Original strand, 40232288 - 40232410
Alignment:
Q  244 atggtgaccacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatattttttataaa-- 341  Q
    |||| ||||||||||||||||||||| | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||      
T  40232288 atggggaccacaaaaagtatttataaggggtaaatctgtcaaattttgcttagaaatttgagaaggtcaagtattgtgggacaaatattttttacaaata 40232387  T
Q  342 -gtcacttatttagggacggagg 363  Q
     |||||||||| | |||||||||    
T  40232388 ggtcacttattcaaggacggagg 40232410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 105 - 246
Target Start/End: Original strand, 41427647 - 41427788
Alignment:
Q  105 ttactccctccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgagtt 204  Q
    |||||||||||||| || ||||| ||  |||||||| |||||||||||||||       |||||||||||||||||||||||| ||||||||| ||| ||    
T  41427647 ttactccctccgtctctaaataaatggtctatttgatcatttcacacagattaaaaaaagtgtaaagatgaaagaaagagagtaatacttttattgaatt 41427746  T
Q  205 acccttgtcattattttgaaactttttcacttttaagtaatg 246  Q
     |||||||||||||||||||||||||||||||||||||||||    
T  41427747 gcccttgtcattattttgaaactttttcacttttaagtaatg 41427788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 249 - 363
Target Start/End: Original strand, 27596263 - 27596380
Alignment:
Q  249 gaccacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatattttttataaa---gtca 345  Q
    ||||||||||||||||||||||| |||||||||||||||||| | ||||||| |||||||||||||||||||||||||||||||||||| |||   ||||    
T  27596263 gaccacaaaaagtatttataaagggtaaatctgtcaaattttgcctagaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtca 27596362  T
Q  346 cttatttagggacggagg 363  Q
    |||||| |||||||||||    
T  27596363 cttattcagggacggagg 27596380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 244 - 363
Target Start/End: Complemental strand, 29737532 - 29737410
Alignment:
Q  244 atggtgaccacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatattttttataaa-- 341  Q
    |||| ||||||||||||||||||||| | |||||||||||||||||| ||||||||| | |||||||||||||||||||||||||||||||||| |||      
T  29737532 atggggaccacaaaaagtatttataaggggtaaatctgtcaaattttgcttagaaatctaagaaggtcaagtattgtgggacaaatattttttacaaata 29737433  T
Q  342 -gtcacttatttagggacggagg 363  Q
     |||||||||| |||||||||||    
T  29737432 ggtcacttattcagggacggagg 29737410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 244 - 337
Target Start/End: Original strand, 24300317 - 24300410
Alignment:
Q  244 atggtgaccacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatatttttta 337  Q
    |||| ||||||||||||||||||||| | |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  24300317 atggggaccacaaaaagtatttataaggggtaaatctgtcaaattttgcttagaaatttgataaggtcaagtattgtgggacaaatatttttta 24300410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 244 - 363
Target Start/End: Original strand, 41427821 - 41427943
Alignment:
Q  244 atggtgaccacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatattttttataaa-- 341  Q
    |||| ||||||||||||||||||||| | |||||||||||||||||| ||||||||| ||||||| |||| ||||||||||||||||||||||| |||      
T  41427821 atggggaccacaaaaagtatttataaggggtaaatctgtcaaattttgcttagaaatctgagaagatcaaatattgtgggacaaatattttttacaaata 41427920  T
Q  342 -gtcacttatttagggacggagg 363  Q
     |||||||||||| |||||||||    
T  41427921 ggtcacttatttaaggacggagg 41427943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 257 - 363
Target Start/End: Original strand, 25943831 - 25943940
Alignment:
Q  257 aaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatattttttataaa---gtcacttattta 353  Q
    ||||||||||||| | |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| |||   |||||||||| |    
T  25943831 aaagtatttataaggggtaaatctgtcaaattttgcttagaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattca 25943930  T
Q  354 gggacggagg 363  Q
    ||||||||||    
T  25943931 gggacggagg 25943940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 244 - 337
Target Start/End: Complemental strand, 6392398 - 6392305
Alignment:
Q  244 atggtgaccacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatatttttta 337  Q
    |||| ||||||||||||||||||||| | |||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||||||||    
T  6392398 atggggaccacaaaaagtatttataaggggtaaatctgtcaaattttgcttagaaatctgagaaggtaaagtattgtgggacaaatatttttta 6392305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 244 - 363
Target Start/End: Complemental strand, 4041074 - 4040952
Alignment:
Q  244 atggtgaccacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatattttttataaa-- 341  Q
    |||| |||||||| |||||||||||| | ||||||| |||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| |||      
T  4041074 atggggaccacaacaagtatttataaggggtaaatccgtcaaattttgcttagaaatctgagaaggtcaagtattgtgggacaaatattttttacaaata 4040975  T
Q  342 -gtcacttatttagggacggagg 363  Q
     |||||||||| || ||||||||    
T  4040974 ggtcacttattcagagacggagg 4040952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 249 - 359
Target Start/End: Original strand, 31689531 - 31689644
Alignment:
Q  249 gaccacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatattttttataaa---gtca 345  Q
    ||||||||||||||| ||||| | |||||||||||||||||| ||||||||| ||||||||||||||||||||||||| |||||||||| |||   ||||    
T  31689531 gaccacaaaaagtatatataaggggtaaatctgtcaaattttgcttagaaatctgagaaggtcaagtattgtgggacagatattttttacaaataggtca 31689630  T
Q  346 cttatttagggacg 359  Q
    |||||| |||||||    
T  31689631 cttattcagggacg 31689644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 106 - 226
Target Start/End: Complemental strand, 22338268 - 22338148
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgagtta 205  Q
    |||||||||||||||| ||||||||||||| || |||||||||||||||||       |||||||||||||||||||||||||||| ||||||||| ||     
T  22338268 tactccctccgtccctaaataagtgacctacttaaccatttcacacagattaagaaaagtgtaaagatgaaagaaagagagtgatatttttactgaattg 22338169  T
Q  206 cccttgtcattattttgaaac 226  Q
    ||||| | |||||||| ||||    
T  22338168 cccttattattatttttaaac 22338148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 249 - 336
Target Start/End: Original strand, 38276723 - 38276810
Alignment:
Q  249 gaccacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatatttttt 336  Q
    ||||||||||||||||||||| | |||||||||||||||| | ||||||||| ||| |||||||||||||||||||||||||||||||    
T  38276723 gaccacaaaaagtatttataaggggtaaatctgtcaaattctgcttagaaatatgaaaaggtcaagtattgtgggacaaatatttttt 38276810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 244 - 336
Target Start/End: Original strand, 21442971 - 21443063
Alignment:
Q  244 atggtgaccacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatatttttt 336  Q
    |||| ||||||||||||||||||||| |  ||||| ||||||||| |||||| |||| |||||||||||||||||||||||||||||||||||    
T  21442971 atggagaccacaaaaagtatttataagggataaatttgtcaaattctacttaaaaatctgagaaggtcaagtattgtgggacaaatatttttt 21443063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 166 - 246
Target Start/End: Original strand, 38276605 - 38276685
Alignment:
Q  166 gtaaagatgaaagaaagagagtgatacttttactgagttacccttgtcattattttgaaactttttcacttttaagtaatg 246  Q
    |||||||||||||||||||| ||||  ||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  38276605 gtaaagatgaaagaaagagaatgatgtttttactgaattgcccttgtcattattttgaaactttttcacttttaagtaatg 38276685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 123 - 212
Target Start/End: Original strand, 24300171 - 24300260
Alignment:
Q  123 aataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgagttacccttgt 212  Q
    |||||||||| |||||||||||||||||||||||       |||| |||||||||||||||||||||||||||||||||||| |||||||    
T  24300171 aataagtgacatatttgaccatttcacacagattaagaaaagtgtgaagatgaaagaaagagagtgatacttttactgagttgcccttgt 24300260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 244 - 336
Target Start/End: Complemental strand, 48838187 - 48838095
Alignment:
Q  244 atggtgaccacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatatttttt 336  Q
    |||| ||||||||||||||||||||| | |||||| ||||||||| | |||| |||| |||||| ||||||||||||||||||||||||||||    
T  48838187 atggagaccacaaaaagtatttataaggggtaaatttgtcaaattctgcttaaaaatctgagaaagtcaagtattgtgggacaaatatttttt 48838095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 115 - 226
Target Start/End: Complemental strand, 22620041 - 22619930
Alignment:
Q  115 cgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgagttacccttgtca 214  Q
    ||||||||||||||||||||| |||| |||||||||||||||       |||||||||||||||||||||||||||| ||||| ||| || || || | |    
T  22620041 cgtccctgaataagtgacctacttgatcatttcacacagattaagaaaagtgtaaagatgaaagaaagagagtgatatttttattgaattgcctttatta 22619942  T
Q  215 ttattttgaaac 226  Q
    ||||||| ||||    
T  22619941 ttatttttaaac 22619930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 112 - 248
Target Start/End: Original strand, 21442806 - 21442940
Alignment:
Q  112 ctccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgagttacccttg 211  Q
    |||||||||| ||||  ||||||| || ||||||||| |||||||       |||||||||||||| ||| ||| ||||| ||||||| | || ||||||    
T  21442806 ctccgtccctcaatatttgacctacttcaccatttcatacagattaagaaaagtgtaaagatgaaaaaaatagaatgatatttttactaaattgcccttg 21442905  T
Q  212 tcattattttgaaactttttcacttttaagtaatggt 248  Q
    | |||||||||||||  ||||||||||||||||||||    
T  21442906 ttattattttgaaac--tttcacttttaagtaatggt 21442940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 106 - 139
Target Start/End: Original strand, 22337710 - 22337743
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttg 139  Q
    ||||||||||||||||||||||||||||||||||    
T  22337710 tactccctccgtccctgaataagtgacctatttg 22337743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 106 - 139
Target Start/End: Complemental strand, 27596385 - 27596352
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttg 139  Q
    ||||||||||||||||||||||||||||||||||    
T  27596385 tactccctccgtccctgaataagtgacctatttg 27596352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 106 - 139
Target Start/End: Original strand, 29737405 - 29737438
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttg 139  Q
    ||||||||||||||||||||||||||||||||||    
T  29737405 tactccctccgtccctgaataagtgacctatttg 29737438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 139
Target Start/End: Complemental strand, 25943943 - 25943912
Alignment:
Q  108 ctccctccgtccctgaataagtgacctatttg 139  Q
    ||||||||||||||||||||||||||||||||    
T  25943943 ctccctccgtccctgaataagtgacctatttg 25943912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 105 - 139
Target Start/End: Original strand, 4040946 - 4040980
Alignment:
Q  105 ttactccctccgtccctgaataagtgacctatttg 139  Q
    |||||||||||||| ||||||||||||||||||||    
T  4040946 ttactccctccgtctctgaataagtgacctatttg 4040980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 106 - 156
Target Start/End: Original strand, 7380535 - 7380585
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttgaccatttcacacagatt 156  Q
    |||| ||||||||  ||||||||||| ||| ||||||||||||||||||||    
T  7380535 tacttcctccgtctttgaataagtgatctacttgaccatttcacacagatt 7380585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 363
Target Start/End: Complemental strand, 22337802 - 22337715
Alignment:
Q  280 tgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaa-atattttttataaa---gtcacttatttagggacggagg 363  Q
    |||||| |||| |||  |||||||||||||||||||||| ||||||||  | ||||||| |||   |||||||||| |||||||||||    
T  22337802 tgtcaatttttgctttaaaatttgagaaggtcaagtattttgggacaattttttttttacaaataggtcacttattcagggacggagg 22337715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 106 - 139
Target Start/End: Original strand, 22619524 - 22619557
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttg 139  Q
    |||||||||||| |||||||||||||||||||||    
T  22619524 tactccctccgttcctgaataagtgacctatttg 22619557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 106 - 139
Target Start/End: Complemental strand, 31689653 - 31689620
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttg 139  Q
    |||||||| |||||||||||||||||||||||||    
T  31689653 tactcccttcgtccctgaataagtgacctatttg 31689620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 106 - 139
Target Start/End: Complemental strand, 40232415 - 40232382
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttg 139  Q
    |||||||||||||| |||||||||||||||||||    
T  40232415 tactccctccgtccttgaataagtgacctatttg 40232382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 103 - 139
Target Start/End: Complemental strand, 24300447 - 24300411
Alignment:
Q  103 tattactccctccgtccctgaataagtgacctatttg 139  Q
    ||||||||||||||||  |||||||||||||||||||    
T  24300447 tattactccctccgtctttgaataagtgacctatttg 24300411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 100; Significance: 3e-49; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 106 - 246
Target Start/End: Original strand, 92169 - 92309
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgagtta 205  Q
    |||||||||||| |||||||||||||||||| ||||||||||||| |||||       |||||||||||||||||||||||||| ||||||||||||||     
T  92169 tactccctccgttcctgaataagtgacctatgtgaccatttcacatagattaagaaaagtgtaaagatgaaagaaagagagtgacacttttactgagttg 92268  T
Q  206 cccttgtcattattttgaaactttttcacttttaagtaatg 246  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  92269 cccttgtcattattttgaaactttttcacttttaagtaatg 92309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 103 - 139
Target Start/End: Complemental strand, 92423 - 92387
Alignment:
Q  103 tattactccctccgtccctgaataagtgacctatttg 139  Q
    |||||||||||||||| |||||||||||| |||||||    
T  92423 tattactccctccgtctctgaataagtgatctatttg 92387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 96; Significance: 7e-47; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 106 - 246
Target Start/End: Original strand, 10017 - 10157
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgagtta 205  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||||||||       |||||||||| ||||||||||||||||| ||||||||||||     
T  10017 tactccctccatcccttaataagtgacctatttgaccatttcacacagattaagaaaagtgtaaagataaaagaaagagagtgatatttttactgagttg 10116  T
Q  206 cccttgtcattattttgaaactttttcacttttaagtaatg 246  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  10117 cccttgttattattttgaaactttttcacttttaagtaatg 10157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 244 - 337
Target Start/End: Original strand, 10190 - 10283
Alignment:
Q  244 atggtgaccacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatatttttta 337  Q
    |||| ||||||||||||||||||||| |  ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||    
T  10190 atggggaccacaaaaagtatttataagggataaatctgtcaaattttgcttagaaatatgagaaggtcaagtattgtgggacaaatatttttta 10283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 92; Significance: 2e-44; HSPs: 3)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 106 - 246
Target Start/End: Complemental strand, 70053 - 69913
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgagtta 205  Q
    |||||||||||||||| |||||||||| ||||||||||||| | |||||||       |||||||||||||||||||||||||||| ||||||||||||     
T  70053 tactccctccgtccctaaataagtgacttatttgaccatttgatacagattaagaaaagtgtaaagatgaaagaaagagagtgataattttactgagttg 69954  T
Q  206 cccttgtcattattttgaaactttttcacttttaagtaatg 246  Q
     ||||||||||||||||||||||||||||||||||||||||    
T  69953 tccttgtcattattttgaaactttttcacttttaagtaatg 69913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 252 - 363
Target Start/End: Complemental strand, 69872 - 69758
Alignment:
Q  252 cacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatattttttataaa---gtcactt 348  Q
    ||||||||||||||||||   |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||   |||||||    
T  69872 cacaaaaagtatttataagcggtaaatctgtcaaattttgcttagaaatttgagaaggtcaagtattgtgggacaaatattttttacaaatatgtcactt 69773  T
Q  349 atttagggacggagg 363  Q
    ||| |||||||||||    
T  69772 attcagggacggagg 69758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 106 - 139
Target Start/End: Original strand, 69753 - 69786
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttg 139  Q
    ||||||||||||||||||||||||||| ||||||    
T  69753 tactccctccgtccctgaataagtgacatatttg 69786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 89; Significance: 1e-42; HSPs: 3)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 244 - 363
Target Start/End: Complemental strand, 16484 - 16362
Alignment:
Q  244 atggtgaccacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatattttttataaa-- 341  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||      
T  16484 atggggaccacaaaaagtatttataaagggtaaatctgtcaaattttgcttagaaatttgagaaggtcaagtattgtgggacaaatattttttacaaata 16385  T
Q  342 -gtcacttatttagggacggagg 363  Q
     |||||||||| |||||||||||    
T  16384 ggtcacttattcagggacggagg 16362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 109 - 246
Target Start/End: Complemental strand, 16641 - 16517
Alignment:
Q  109 tccctccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgagttaccc 208  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||             ||| ||     
T  16641 tccctccgtccctaaataagtgacctatttgaccatttcacacagattaagaaaagtgtaaagatgaaagaaagagagtg-------------gttgcct 16555  T
Q  209 ttgtcattattttgaaactttttcacttttaagtaatg 246  Q
    ||||||||||||||||||||||||||||||||||||||    
T  16554 ttgtcattattttgaaactttttcacttttaagtaatg 16517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 106 - 139
Target Start/End: Original strand, 16357 - 16390
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttg 139  Q
    ||||||||||||||||||||||||||||||||||    
T  16357 tactccctccgtccctgaataagtgacctatttg 16390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0532 (Bit Score: 84; Significance: 1e-39; HSPs: 2)
Name: scaffold0532
Description:

Target: scaffold0532; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 106 - 246
Target Start/End: Complemental strand, 4114 - 3974
Alignment:
Q  106 tactccctccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgagtta 205  Q
    |||||||||||||||||||||| | | ||||||||||||||||||||||||       | |||||||||||| ||| |||| | ||||||||||||||||    
T  4114 tactccctccgtccctgaataaataatctatttgaccatttcacacagattaagaaaagggtaaagatgaaaaaaaaagagcgctacttttactgagtta 4015  T
Q  206 cccttgtcattattttgaaactttttcacttttaagtaatg 246  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  4014 cccttgtcattattttaaaactttttcacttttaagtaatg 3974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0532; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 249 - 337
Target Start/End: Complemental strand, 3936 - 3848
Alignment:
Q  249 gaccacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatatttttta 337  Q
    |||| ||||||||||||||||   |||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||    
T  3936 gaccgcaaaaagtatttataagaggtaaatctgtcaaattttgcttagaaatctgagaaggtcaagtattatgggacaaatatttttta 3848  T

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Target: scaffold1194 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: scaffold1194
Description:

Target: scaffold1194; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 244 - 336
Target Start/End: Complemental strand, 1106 - 1014
Alignment:
Q  244 atggtgaccacaaaaagtatttataaagagtaaatctgtcaaattttacttagaaatttgagaaggtcaagtattgtgggacaaatatttttt 336  Q
    |||| ||||||||||||||||||||| | |||||| ||||||||  | |||| |||| ||||||| |||||||||||||||||||||||||||    
T  1106 atggagaccacaaaaagtatttataaggggtaaatttgtcaaatcctgcttaaaaatctgagaagctcaagtattgtgggacaaatatttttt 1014  T

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Target: scaffold1194; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 105 - 246
Target Start/End: Complemental strand, 1268 - 1130
Alignment:
Q  105 ttactccctccgtccctgaataagtgacctatttgaccatttcacacagattnnnnnnngtgtaaagatgaaagaaagagagtgatacttttactgagtt 204  Q
    ||||||||||||||||| ||||  | ||||| |||||||||||||||| |||       |||||||||||||||||||||| ||||| ||||||||| ||    
T  1268 ttactccctccgtccctcaatacttcacctacttgaccatttcacacaaattaaacaa-gtgtaaagatgaaagaaagagaatgatatttttactgaatt 1170  T
Q  205 acccttgtcattattttgaaactttttcacttttaagtaatg 246  Q
     | ||||| |||||||||||||   |||||||||||||||||    
T  1169 gctcttgttattattttgaaac--cttcacttttaagtaatg 1130  T

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Target: scaffold0459 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 101 - 141
Target Start/End: Original strand, 12747 - 12787
Alignment:
Q  101 tttattactccctccgtccctgaataagtgacctatttgac 141  Q
    ||||||||||||||||||||| ||||||||||||| |||||    
T  12747 tttattactccctccgtccctaaataagtgacctagttgac 12787  T

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Target: scaffold0366 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 101 - 141
Target Start/End: Original strand, 10388 - 10428
Alignment:
Q  101 tttattactccctccgtccctgaataagtgacctatttgac 141  Q
    ||||||||||||||||||||| ||||||||||||| |||||    
T  10388 tttattactccctccgtccctaaataagtgacctagttgac 10428  T

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Target: scaffold0366; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 101 - 141
Target Start/End: Original strand, 14054 - 14094
Alignment:
Q  101 tttattactccctccgtccctgaataagtgacctatttgac 141  Q
    ||||||||||||||||||||| ||||||||||||| |||||    
T  14054 tttattactccctccgtccctaaataagtgacctagttgac 14094  T

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