View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20198_high_6 (Length: 419)

Name: NF20198_high_6
Description: NF20198
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20198_high_6
NF20198_high_6
[»] chr7 (31 HSPs)
chr7 (95-375)||(27508576-27508857)
chr7 (96-368)||(5080114-5080388)
chr7 (126-378)||(14197454-14197708)
chr7 (92-345)||(38761023-38761275)
chr7 (131-348)||(6441372-6441588)
chr7 (90-367)||(15000639-15000919)
chr7 (96-373)||(3404458-3404735)
chr7 (174-374)||(45012848-45013049)
chr7 (92-208)||(43257399-43257515)
chr7 (92-203)||(36150844-36150955)
chr7 (215-375)||(36150935-36151097)
chr7 (215-375)||(43257262-43257424)
chr7 (106-344)||(37787718-37787952)
chr7 (96-197)||(3404634-3404735)
chr7 (98-199)||(5080111-5080212)
chr7 (96-185)||(45013061-45013150)
chr7 (263-344)||(15272354-15272435)
chr7 (99-199)||(15272326-15272426)
chr7 (96-199)||(27508752-27508855)
chr7 (92-194)||(29934448-29934550)
chr7 (96-199)||(14197459-14197562)
chr7 (272-339)||(27508612-27508679)
chr7 (272-368)||(43257408-43257506)
chr7 (96-171)||(45012849-45012924)
chr7 (272-342)||(6441520-6441590)
chr7 (122-199)||(6441371-6441447)
chr7 (96-199)||(15000822-15000925)
chr7 (96-199)||(36150992-36151095)
chr7 (96-199)||(38760994-38761095)
chr7 (145-203)||(21658689-21658747)
chr7 (287-339)||(38761183-38761235)
[»] chr1 (16 HSPs)
chr1 (92-375)||(50335437-50335722)
chr1 (92-344)||(37607969-37608219)
chr1 (101-344)||(8097746-8097989)
chr1 (116-344)||(13735465-13735693)
chr1 (93-348)||(42847022-42847270)
chr1 (96-195)||(42847198-42847297)
chr1 (92-204)||(11633190-11633302)
chr1 (96-199)||(50335617-50335720)
chr1 (131-375)||(32373984-32374203)
chr1 (96-199)||(32373986-32374088)
chr1 (97-181)||(37608165-37608249)
chr1 (238-359)||(11633272-11633395)
chr1 (272-373)||(50335441-50335544)
chr1 (96-190)||(13735631-13735723)
chr1 (92-124)||(13735418-13735450)
chr1 (272-340)||(37608007-37608075)
[»] chr5 (32 HSPs)
chr5 (87-375)||(13753227-13753517)
chr5 (95-378)||(21943738-21944023)
chr5 (98-375)||(10760006-10760284)
chr5 (131-344)||(17497031-17497243)
chr5 (94-375)||(30100612-30100892)
chr5 (93-342)||(2555436-2555685)
chr5 (92-317)||(19564713-19564942)
chr5 (97-344)||(19491673-19491920)
chr5 (221-368)||(21211422-21211571)
chr5 (92-307)||(30852582-30852790)
chr5 (99-375)||(31912194-31912472)
chr5 (154-344)||(20429908-20430098)
chr5 (105-297)||(34419489-34419681)
chr5 (131-298)||(11297993-11298161)
chr5 (122-328)||(12895554-12895758)
chr5 (98-199)||(21211419-21211520)
chr5 (96-199)||(21943743-21943846)
chr5 (96-185)||(30100614-30100703)
chr5 (99-199)||(17497171-17497271)
chr5 (95-199)||(19491848-19491952)
chr5 (96-199)||(13753229-13753332)
chr5 (262-342)||(43548938-43549018)
chr5 (131-199)||(43548948-43549016)
chr5 (96-199)||(2555615-2555718)
chr5 (131-168)||(21211606-21211643)
chr5 (229-317)||(32539326-32539413)
chr5 (97-199)||(20429878-20429980)
chr5 (290-340)||(34419515-34419565)
chr5 (287-340)||(10760198-10760251)
chr5 (287-373)||(13753420-13753508)
chr5 (275-339)||(19491708-19491772)
chr5 (301-341)||(30852796-30852836)
[»] chr8 (38 HSPs)
chr8 (92-373)||(25149238-25149521)
chr8 (92-342)||(35202594-35202845)
chr8 (94-375)||(18323997-18324278)
chr8 (94-375)||(23976088-23976370)
chr8 (94-375)||(22469431-22469713)
chr8 (96-316)||(37543851-37544071)
chr8 (96-241)||(12106969-12107114)
chr8 (94-348)||(4288949-4289206)
chr8 (230-375)||(12106865-12107012)
chr8 (133-335)||(22326446-22326648)
chr8 (94-279)||(41358778-41358963)
chr8 (94-245)||(22426845-22426995)
chr8 (174-344)||(21124437-21124607)
chr8 (92-269)||(21124323-21124500)
chr8 (107-311)||(24609090-24609294)
chr8 (170-375)||(31253980-31254178)
chr8 (96-206)||(21184299-21184408)
chr8 (96-199)||(12106867-12106970)
chr8 (96-199)||(23976090-23976194)
chr8 (95-199)||(25149237-25149341)
chr8 (231-348)||(23625105-23625222)
chr8 (229-344)||(21185795-21185910)
chr8 (162-247)||(29585578-29585663)
chr8 (106-171)||(37494325-37494390)
chr8 (251-375)||(10289353-10289478)
chr8 (116-206)||(23625054-23625144)
chr8 (131-199)||(18324173-18324241)
chr8 (94-241)||(31253933-31254081)
chr8 (96-199)||(21124535-21124638)
chr8 (96-199)||(22469433-22469536)
chr8 (96-185)||(4288922-4289011)
chr8 (96-185)||(23625160-23625249)
chr8 (131-199)||(35202775-35202843)
chr8 (96-199)||(21185838-21185941)
chr8 (307-375)||(31250292-31250362)
chr8 (303-345)||(37494345-37494387)
chr8 (287-340)||(21124362-21124415)
chr8 (272-340)||(25149414-25149482)
[»] chr6 (21 HSPs)
chr6 (84-390)||(13536548-13536857)
chr6 (93-375)||(25089149-25089433)
chr6 (92-344)||(19295312-19295564)
chr6 (96-344)||(21222496-21222746)
chr6 (92-344)||(10587918-10588154)
chr6 (92-342)||(10862009-10862258)
chr6 (229-375)||(26705161-26705309)
chr6 (136-344)||(10672649-10672856)
chr6 (92-191)||(28752238-28752337)
chr6 (96-199)||(10587887-10587990)
chr6 (96-199)||(19295281-19295384)
chr6 (96-199)||(26705204-26705307)
chr6 (132-276)||(12651182-12651325)
chr6 (96-199)||(21222465-21222568)
chr6 (96-199)||(25089328-25089431)
chr6 (96-185)||(13536751-13536840)
chr6 (229-273)||(26705129-26705173)
chr6 (272-338)||(25089189-25089255)
chr6 (272-340)||(13536595-13536663)
chr6 (134-166)||(10862221-10862253)
chr6 (287-339)||(12651273-12651325)
[»] chr3 (47 HSPs)
chr3 (92-342)||(48755323-48755574)
chr3 (92-375)||(33343002-33343285)
chr3 (92-342)||(1426480-1426721)
chr3 (92-273)||(15031184-15031365)
chr3 (91-344)||(21514739-21514992)
chr3 (122-345)||(11989075-11989298)
chr3 (161-368)||(14434645-14434854)
chr3 (188-375)||(15031312-15031501)
chr3 (100-342)||(44967859-44968100)
chr3 (96-241)||(26498650-26498795)
chr3 (163-340)||(15005025-15005202)
chr3 (229-374)||(26498547-26498694)
chr3 (96-326)||(18445454-18445684)
chr3 (94-238)||(38498133-38498277)
chr3 (92-326)||(43562660-43562883)
chr3 (229-375)||(38498236-38498384)
chr3 (91-366)||(26920151-26920427)
chr3 (91-199)||(26498543-26498651)
chr3 (231-345)||(39541745-39541859)
chr3 (215-344)||(20759046-20759175)
chr3 (89-202)||(42453036-42453149)
chr3 (92-204)||(39541670-39541782)
chr3 (92-206)||(20758955-20759069)
chr3 (96-199)||(11989045-11989148)
chr3 (96-199)||(15031396-15031499)
chr3 (96-199)||(20759103-20759206)
chr3 (96-199)||(38498279-38498382)
chr3 (231-326)||(41984954-41985049)
chr3 (95-199)||(41984904-41985008)
chr3 (96-199)||(21514920-21515023)
chr3 (143-326)||(26840038-26840219)
chr3 (93-242)||(7300152-7300300)
chr3 (95-199)||(18445404-18445508)
chr3 (131-199)||(48755504-48755572)
chr3 (116-199)||(39541786-39541869)
chr3 (92-180)||(33412200-33412288)
chr3 (97-199)||(14434641-14434743)
chr3 (187-284)||(36383089-36383186)
chr3 (131-199)||(1426651-1426719)
chr3 (131-199)||(44968031-44968098)
chr3 (272-340)||(48755362-48755430)
chr3 (273-373)||(33343006-33343108)
chr3 (96-199)||(33343180-33343283)
chr3 (272-368)||(44967860-44967958)
chr3 (131-199)||(15005134-15005202)
chr3 (287-339)||(26498707-26498759)
chr3 (272-373)||(42453043-42453146)
[»] chr4 (56 HSPs)
chr4 (87-344)||(30470849-30471106)
chr4 (92-374)||(18830574-18830853)
chr4 (92-375)||(2634022-2634307)
chr4 (95-375)||(5448195-5448477)
chr4 (92-342)||(10380633-10380878)
chr4 (94-375)||(2063144-2063427)
chr4 (109-337)||(11821736-11821968)
chr4 (93-267)||(55382664-55382838)
chr4 (131-344)||(18836311-18836523)
chr4 (92-344)||(30378739-30378986)
chr4 (127-344)||(5324714-5324927)
chr4 (92-320)||(47943503-47943731)
chr4 (96-326)||(9826632-9826862)
chr4 (92-241)||(22017984-22018133)
chr4 (87-273)||(1387444-1387631)
chr4 (174-344)||(37694931-37695101)
chr4 (129-375)||(2232370-2232616)
chr4 (93-322)||(18500596-18500824)
chr4 (94-273)||(37695034-37695213)
chr4 (180-375)||(10757568-10757765)
chr4 (180-375)||(10970739-10970936)
chr4 (229-368)||(22017887-22018028)
chr4 (259-348)||(3391170-3391259)
chr4 (256-374)||(47463813-47463933)
chr4 (96-197)||(10757570-10757671)
chr4 (96-197)||(10970741-10970842)
chr4 (94-203)||(29908887-29908996)
chr4 (96-263)||(3369965-3370132)
chr4 (229-375)||(12140665-12140813)
chr4 (174-344)||(1387310-1387479)
chr4 (96-190)||(47463814-47463908)
chr4 (122-199)||(3391183-3391260)
chr4 (229-337)||(8951058-8951166)
chr4 (96-165)||(30378948-30379017)
chr4 (174-327)||(47144767-47144920)
chr4 (99-199)||(22017885-22017985)
chr4 (96-199)||(5448372-5448475)
chr4 (131-200)||(37694935-37695004)
chr4 (95-199)||(9826808-9826912)
chr4 (92-148)||(47463916-47463972)
chr4 (272-340)||(55382732-55382800)
chr4 (96-199)||(2063322-2063425)
chr4 (91-202)||(8951161-8951272)
chr4 (96-199)||(12140667-12140770)
chr4 (96-199)||(18830575-18830677)
chr4 (96-199)||(2232372-2232475)
chr4 (96-199)||(2634024-2634127)
chr4 (287-379)||(55382572-55382666)
chr4 (97-199)||(5324684-5324786)
chr4 (288-340)||(18830766-18830818)
chr4 (96-160)||(18836280-18836344)
chr4 (96-171)||(11821931-11822006)
chr4 (272-330)||(22018026-22018084)
chr4 (99-200)||(8951023-8951124)
chr4 (174-266)||(1387419-1387511)
chr4 (131-199)||(30470853-30470921)
[»] scaffold0102 (2 HSPs)
scaffold0102 (92-379)||(23888-24176)
scaffold0102 (96-199)||(24068-24170)
[»] chr2 (15 HSPs)
chr2 (116-375)||(22092880-22093141)
chr2 (96-315)||(39598567-39598786)
chr2 (92-342)||(31819911-31820160)
chr2 (96-348)||(24006907-24007159)
chr2 (215-375)||(32092757-32092919)
chr2 (92-345)||(31499381-31499634)
chr2 (131-206)||(32092896-32092971)
chr2 (96-197)||(32092759-32092860)
chr2 (99-199)||(24006883-24006983)
chr2 (126-208)||(17914036-17914117)
chr2 (229-325)||(17914106-17914202)
chr2 (149-261)||(8219193-8219304)
chr2 (272-327)||(39598683-39598738)
chr2 (231-273)||(32092893-32092935)
chr2 (272-342)||(32092903-32092973)
[»] scaffold0011 (2 HSPs)
scaffold0011 (89-375)||(190176-190463)
scaffold0011 (96-199)||(190178-190281)
[»] scaffold0003 (1 HSPs)
scaffold0003 (144-315)||(314126-314296)
[»] scaffold1300 (2 HSPs)
scaffold1300 (96-344)||(1357-1598)
scaffold1300 (95-199)||(1526-1630)
[»] scaffold0026 (2 HSPs)
scaffold0026 (98-324)||(57451-57677)
scaffold0026 (95-199)||(57625-57729)
[»] scaffold0024 (2 HSPs)
scaffold0024 (96-326)||(127804-128034)
scaffold0024 (95-199)||(127980-128084)
[»] scaffold0066 (2 HSPs)
scaffold0066 (93-341)||(15362-15605)
scaffold0066 (272-340)||(15400-15468)
[»] scaffold0049 (2 HSPs)
scaffold0049 (229-343)||(59737-59851)
scaffold0049 (102-199)||(59711-59808)
[»] scaffold0407 (6 HSPs)
scaffold0407 (188-341)||(870-1022)
scaffold0407 (188-341)||(7334-7486)
scaffold0407 (131-273)||(969-1111)
scaffold0407 (131-273)||(7433-7575)
scaffold0407 (131-199)||(871-938)
scaffold0407 (131-199)||(7335-7402)
[»] scaffold0039 (2 HSPs)
scaffold0039 (90-375)||(27487-27761)
scaffold0039 (96-199)||(27489-27592)
[»] scaffold0047 (3 HSPs)
scaffold0047 (92-238)||(11602-11747)
scaffold0047 (237-344)||(11714-11819)
scaffold0047 (96-168)||(11778-11850)
[»] scaffold0018 (5 HSPs)
scaffold0018 (229-317)||(72015-72103)
scaffold0018 (96-180)||(72106-72190)
scaffold0018 (128-183)||(71940-71995)
scaffold0018 (291-379)||(72106-72196)
scaffold0018 (300-340)||(71943-71983)


Alignment Details
Target: chr7 (Bit Score: 164; Significance: 2e-87; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 95 - 375
Target Start/End: Original strand, 27508576 - 27508857
Alignment:
Q  95 gattagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtc 194  Q
    |||||||||||| ||||||| |||||||||  |||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  27508576 gattagtcactt-agtccctgaataggaaatgagtcatcactttagtccctgaatgcagataaattgcaaaatagtccctgaatgtagactatgttagtc 27508674  T
Q  195 aatttagtccctaactgcatactctattagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtctacat 294  Q
    |||||||||||| | |||| ||||| ||||| | ||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||  ||||||||    
T  27508675 aatttagtccctgaatgcagactctgttagtcaatttagtccctgaatgtagactccgttagtcactttagtccatgaaattgactaacagagtctacat 27508774  T
Q  295 tcaaagactgttttgcaatttctctgcattcagagattaaagtgactact--ttttccattaagggattaaagtgaataattc 375  Q
    |||  |||||||||||||||||||| | ||||| || |||||||||||||  ||||||||| |||||||||||||| ||||||    
T  27508775 tcagggactgttttgcaatttctctacgttcagggactaaagtgactactccttttccattcagggattaaagtgactaattc 27508857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 96 - 368
Target Start/End: Complemental strand, 5080388 - 5080114
Alignment:
Q  96 attagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtca 195  Q
    |||||||||||||||| || ||||||||| ||||||| | |||||||||||||||||||||||||| |||||| ||  |||||||| ||||| |||||||    
T  5080388 attagtcactttagtctctgaataggaaagaagtcgttattttagtccctgaatgcagataaattgtaaaatagtctctgaatgtaaactatattagtca 5080289  T
Q  196 atttagtccctaactgcatactctattagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtctacatt 295  Q
    ||||||||||| | |||| ||||  ||| | | |||||| |||||||||||| ||||||| ||| |||||||| |||||||||| ||||  |||||||||    
T  5080288 atttagtccctgaatgcagactccgttaatcaatttagtacctgaatgtagactccgttaatcattttagtccttgaaattgactaacagagtctacatt 5080189  T
Q  296 caaagactgttttgcaatttctctgcattcagagattaaagtgactacttttt--ccattaagggattaaagtga 368  Q
    |||||||||||||||| |||||||||||||||  | |||||||||||||||||  ||||| ||||| ||||||||    
T  5080188 caaagactgttttgcattttctctgcattcaggaactaaagtgactacttttttcccattcagggactaaagtga 5080114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 126 - 378
Target Start/End: Complemental strand, 14197708 - 14197454
Alignment:
Q  126 aagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtcaatttagtccctaactgcatactctattagt 225  Q
    ||||||||| ||||| ||||||||||||||||||||||| ||| ||| |||||||||||| |||||||||||||| ||||| | |||| ||||  |||||    
T  14197708 aagtcgtcattttagcccctgaatgcagataaattgcaatatagtccctgaatgtagactctgttagtcaatttaatccctgaatgcagactccgttagt 14197609  T
Q  226 tactttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtctacattcaaagactgttttgcaatttctctgcattc 325  Q
     | ||||||| || |||||||| ||||||||||||||||||||||||||||||||||||   ||||||||| | |||||||||||||||||||||||||     
T  14197608 caatttagtctctcaatgtagactccgttagtcactttagtccctgaaattgaccaacagaatctacattcgatgactgttttgcaatttctctgcattt 14197509  T
Q  326 agagattaaagtgactacttttt--ccattaagggattaaagtgaataattctcc 378  Q
    || || |||||||||||||||||  ||||| ||| | |||||||| |||||||||    
T  14197508 agggactaaagtgactacttttttcccattgaggaactaaagtgattaattctcc 14197454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 92 - 345
Target Start/End: Complemental strand, 38761275 - 38761023
Alignment:
Q  92 ggagattagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgtta 191  Q
    |||||||| |||||||||||||| |||||||||  |||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||||    
T  38761275 ggagattaatcactttagtccctgaataggaaatgagtcatcactttagtccctgaatgcagataaattgcaaaatagtccctgaatgtagactttgtta 38761176  T
Q  192 gtcaatttagtccctaactgcatactctattagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtcta 291  Q
     ||||||||||||   | |||| ||||| ||||| | ||||||||||||||| ||| || ||||||||||||||||||  ||||||| |||||  |||||    
T  38761175 atcaatttagtcctcgaatgcagactctgttagtcaatttagtccctgaatgcagactctgttagtcactttagtcccaaaaattgatcaacagagtcta 38761076  T
Q  292 cattcaaagactgttttgcaatttctctgcattcagagattaaagtgactactt 345  Q
    || || | |||||||||||||||||||| ||||||   | ||||||||||||||    
T  38761075 ca-tccaggactgttttgcaatttctctacattcacgaactaaagtgactactt 38761023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 131 - 348
Target Start/End: Complemental strand, 6441588 - 6441372
Alignment:
Q  131 gtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtcaatttagtccctaactgcatactctattagttactt 230  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| | |||| ||||| ||||| | ||    
T  6441588 gtcactttagtctctgaatgcagataaattgcaaaataatccctgaatgtagactttgttagtcaatttagtccctgaatgcagactctgttagtcaatt 6441489  T
Q  231 tagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtctacattcaaagactgttttgcaatttctctgcattcagaga 330  Q
    ||||| || |||||||| ||||||||||||||| |||| |||||||||| || |  |||||||||||  |||||||||||||||||| ||||||||| ||    
T  6441488 tagtctctaaatgtagactccgttagtcacttttgtccttgaaattgactaa-agagtctacattcagggactgttttgcaatttctttgcattcaggga 6441390  T
Q  331 ttaaagtgactacttttt 348  Q
     || |||||||| |||||    
T  6441389 ctatagtgactatttttt 6441372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 90 - 367
Target Start/End: Original strand, 15000639 - 15000919
Alignment:
Q  90 aaggagattagtcactttag-tccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatg 188  Q
    |||||||||||||||||||| ||||| |||||||||  | | |||||||||||||||||||||||||||||||||||||| ||   ||||||||| ||||    
T  15000639 aaggagattagtcactttaggtccctgaataggaaaggaattgtcactttagtccctgaatgcagataaattgcaaaatattctcagaatgtagattatg 15000738  T
Q  189 ttagtcaatttagtccctaactgcatactctattagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgt 288  Q
    ||||||| |||||||| | | || | ||||   |||| | |||||||||| |||||||| |||||| | ||||||||||||||||||||||||| |  ||    
T  15000739 ttagtcagtttagtccttgaatgaagactccgatagtcaatttagtcccttaatgtagactccgttggacactttagtccctgaaattgaccaataaagt 15000838  T
Q  289 ctacattcaaagactgttttgcaatttctctgcattcagagattaaagtgactact--ttttccattaagggattaaagtg 367  Q
    ||||||| |  ||||||||||||||| |||||||| || ||| |||||||||||||  ||| ||||| ||||| |||||||    
T  15000839 ctacatttagggactgttttgcaattcctctgcatccaaagactaaagtgactactcatttcccattcagggactaaagtg 15000919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 96 - 373
Target Start/End: Original strand, 3404458 - 3404735
Alignment:
Q  96 attagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtca 195  Q
    ||||||||||||||||| | ||||| ||| || |||||| |||||| ||| || |||||||||||||||| || |||||||||||| ||| |||||||||    
T  3404458 attagtcactttagtccttgaatagaaaagaaatcgtcattttagtacctaaacgcagataaattgcaaagtagtccatgaatgtacactctgttagtca 3404557  T
Q  196 atttagtccctaactgcatactctattagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtctacatt 295  Q
    ||||||||||||| ||||  |||| ||||| | |||||||||||| |||||  ||| ||||||||||||||  |||| |||||| |||   |||||||||    
T  3404558 atttagtccctaaatgca-gctctgttagtcaatttagtccctgagtgtag-ttccattagtcactttagtttctgatattgactaaccgagtctacatt 3404655  T
Q  296 caaagactgttttgcaatttctctgcattcagagattaaagtgacta--ctttttccattaagggattaaagtgaataat 373  Q
    ||| |||| ||||||||||||||||||||||| |  |||||||||||  ||||||||||| ||| | |||||||| ||||    
T  3404656 caaggactattttgcaatttctctgcattcagggcctaaagtgactactctttttccatttaggaactaaagtgactaat 3404735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 174 - 374
Target Start/End: Complemental strand, 45013049 - 45012848
Alignment:
Q  174 tgaatgtagactatgttagtcaatttagtccctaactgcatactctattagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaa 273  Q
    |||||||||| | |||||||||||||||||||| | |||| ||||  ||||| | |||| || ||||||||||| |||| || |||||||||||||||||    
T  45013049 tgaatgtagagtttgttagtcaatttagtccctgaatgcagactccgttagtcaatttaatctctgaatgtagactccgctaatcactttagtccctgaa 45012950  T
Q  274 attgaccaacatcgtctacattcaaagactgttttgcaatttctctgcattcagagattaaagtgactact--ttttccattaagggattaaagtgaata 371  Q
    ||||||||| |  |||||||||   ||| ||||||||||||||| |||||||||||| |||||||||||||  ||| ||||| |||||  ||||||| ||    
T  45012949 attgaccaatagagtctacatt-tgagattgttttgcaatttctttgcattcagagactaaagtgactactcctttcccattcagggaccaaagtgacta 45012851  T
Q  372 att 374  Q
    |||    
T  45012850 att 45012848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 92 - 208
Target Start/End: Complemental strand, 43257515 - 43257399
Alignment:
Q  92 ggagattagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgtta 191  Q
    |||||| |||||||| | ||||| ||||| |||  ||||||||||||| |||||||||||||||||||||||||||||||| ||||| |||||| |||||    
T  43257515 ggagatcagtcacttcaatccctgaatagaaaatgagtcgtcactttaatccctgaatgcagataaattgcaaaataatccttgaatatagactctgtta 43257416  T
Q  192 gtcaatttagtccctaa 208  Q
    |||||||||||||||||    
T  43257415 gtcaatttagtccctaa 43257399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 92 - 203
Target Start/End: Original strand, 36150844 - 36150955
Alignment:
Q  92 ggagattagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgtta 191  Q
    ||||||||||||||||||||| |||||||||||  ||||||||||| | ||| |||||||||||||||||||||||||||| |  ||||||||| |||||    
T  36150844 ggagattagtcactttagtccataaataggaaatgagtcgtcacttaaatccatgaatgcagataaattgcaaaataatccctagatgtagactctgtta 36150943  T
Q  192 gtcaatttagtc 203  Q
    ||||||||||||    
T  36150944 gtcaatttagtc 36150955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 215 - 375
Target Start/End: Original strand, 36150935 - 36151097
Alignment:
Q  215 actctattagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtctacattcaaagactgttttgcaatt 314  Q
    ||||| ||||| | ||||||| ||||||||| | ||||||||||| |||||||| |||||||||||||||  |||||||||||   ||||||||||||||    
T  36150935 actctgttagtcaatttagtctctgaatgtaaactccgttagtcattttagtccttgaaattgaccaacaaagtctacattcaggtactgttttgcaatt 36151034  T
Q  315 tctctgcattcagagattaaagtgactact--ttttccattaagggattaaagtgaataattc 375  Q
    ||||  ||||||  ||||||||||||||||  ||||||||  ||||| |||||||| ||||||    
T  36151035 tctcaacattcaaggattaaagtgactactcattttccatccagggactaaagtgactaattc 36151097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 215 - 375
Target Start/End: Complemental strand, 43257424 - 43257262
Alignment:
Q  215 actctattagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtctacattcaaagactgttttgcaatt 314  Q
    ||||| ||||| | |||||||||| |||||||| | ||||||||| |||| |||||||||||||||||||   |||||||||| ||||| |||| |||||    
T  43257424 actctgttagtcaatttagtccctaaatgtagacttcgttagtcaatttactccctgaaattgaccaacaaaatctacattcagagactcttttacaatt 43257325  T
Q  315 tctctgcattcagagattaaagtgacta--ctttttccattaagggattaaagtgaataattc 375  Q
    ||| ||||||||| || ||| |||||||  | ||||||||| |||||||||||||| ||||||    
T  43257324 tctatgcattcagggactaaggtgactattcattttccattcagggattaaagtgactaattc 43257262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 106 - 344
Target Start/End: Complemental strand, 37787952 - 37787718
Alignment:
Q  106 ttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtcaatttagtccc 205  Q
    ||||||||| |||| ||||  | ||| ||||||||||||||||||||   ||||||||||||| | | |||||||||||| |||||||||||||||||||    
T  37787952 ttagtccctgaataagaaatgaatcgccactttagtccctgaatgca---aaattgcaaaatagttc-tgaatgtagactttgttagtcaatttagtccc 37787857  T
Q  206 taactgcatactctattagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtctacattcaaagactgt 305  Q
    | | |||||||||| ||||| | |||||||  |||||||||| |||| |||||| |||| ||  | |||||||| ||||   | || ||||| |||||||    
T  37787856 tgaatgcatactctgttagtcaatttagtcgttgaatgtagactccgctagtcattttaatctttaaaattgacaaacaaaatttatattcagagactgt 37787757  T
Q  306 tttgcaatttctctgcattcagagattaaagtgactact 344  Q
    ||| |||| |  ||| |||||| || ||||| |||||||    
T  37787756 tttacaatcttcctgtattcagggactaaagggactact 37787718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 96 - 197
Target Start/End: Complemental strand, 3404735 - 3404634
Alignment:
Q  96 attagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtca 195  Q
    ||||||||||||||| ||||||| | |||| ||| |||||||||| ||||||||||||| ||||||||||||| ||| ||||||||||||  ||||||||    
T  3404735 attagtcactttagttcctaaatggaaaaagagtagtcactttaggccctgaatgcagagaaattgcaaaatagtccttgaatgtagactcggttagtca 3404636  T
Q  196 at 197  Q
    ||    
T  3404635 at 3404634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 98 - 199
Target Start/End: Original strand, 5080111 - 5080212
Alignment:
Q  98 tagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtcaat 197  Q
    ||||||||||||||||| ||| |||||||||| ||||||||||| |||||||||||| ||| ||||||| | ||  |||||||||||| |||||||||||    
T  5080111 tagtcactttagtccctgaatgggaaaaaagtagtcactttagttcctgaatgcagagaaaatgcaaaacagtctttgaatgtagactctgttagtcaat 5080210  T
Q  198 tt 199  Q
    ||    
T  5080211 tt 5080212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 96 - 185
Target Start/End: Complemental strand, 45013150 - 45013061
Alignment:
Q  96 attagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagact 185  Q
    ||||||||||||||||||| |||||||||| |||||||| |||||||| |||||||| ||||||||||||||| ||| ||||| ||||||    
T  45013150 attagtcactttagtcccttaataggaaaagagtcgtcagtttagtccttgaatgcaaataaattgcaaaatagtccttgaatatagact 45013061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 263 - 344
Target Start/End: Complemental strand, 15272435 - 15272354
Alignment:
Q  263 tagtccctgaaattgaccaacatcgtctacattcaaagactgttttgcaatttctctgcattcagagattaaagtgactact 344  Q
    ||||||||||||||||||||||  |||||||||||  |||| ||||||||||||||||||||||| || |||| ||||||||    
T  15272435 tagtccctgaaattgaccaacaaagtctacattcagggactattttgcaatttctctgcattcagggactaaaatgactact 15272354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 99 - 199
Target Start/End: Original strand, 15272326 - 15272426
Alignment:
Q  99 agtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtcaatt 198  Q
    |||||||||||||| | |||  ||||  ||| |||| ||||||||||||||||||| ||||||||||||| ||| |||||||||||| |||| |||||||    
T  15272326 agtcactttagtccgtgaatgagaaatgagtagtcattttagtccctgaatgcagagaaattgcaaaatagtccctgaatgtagactttgttggtcaatt 15272425  T
Q  199 t 199  Q
    |    
T  15272426 t 15272426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 96 - 199
Target Start/End: Complemental strand, 27508855 - 27508752
Alignment:
Q  96 attagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtca 195  Q
    ||||||||||||| ||||| ||| | |||  ||| |||||||||||||||||| | ||| ||||||||||| | ||| |||||||||||| |||||||||    
T  27508855 attagtcactttaatccctgaatggaaaaggagtagtcactttagtccctgaacgtagagaaattgcaaaacagtccctgaatgtagactctgttagtca 27508756  T
Q  196 attt 199  Q
    ||||    
T  27508755 attt 27508752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 92 - 194
Target Start/End: Complemental strand, 29934550 - 29934448
Alignment:
Q  92 ggagattagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgtta 191  Q
    |||||||||| |||||||||| |  ||||||||| |||||||||||||||| || || | ||||||||||||||||| | ||||||| |||||  |||||    
T  29934550 ggagattagttactttagtccttggataggaaaatagtcgtcactttagtctcttaaggtagataaattgcaaaatagttcatgaatatagacattgtta 29934451  T
Q  192 gtc 194  Q
    |||    
T  29934450 gtc 29934448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 96 - 199
Target Start/End: Original strand, 14197459 - 14197562
Alignment:
Q  96 attagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtca 195  Q
    |||| |||||||||| ||| ||| |||||||||| ||||||||||||||| |||||||| ||||||||||| | ||   ||||||||| | |||| ||||    
T  14197459 attaatcactttagttcctcaatgggaaaaaagtagtcactttagtccctaaatgcagagaaattgcaaaacagtcatcgaatgtagattctgttggtca 14197558  T
Q  196 attt 199  Q
    ||||    
T  14197559 attt 14197562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 272 - 339
Target Start/End: Complemental strand, 27508679 - 27508612
Alignment:
Q  272 aaattgaccaacatcgtctacattcaaagactgttttgcaatttctctgcattcagagattaaagtga 339  Q
    |||||||| ||||| |||||||||||  |||| ||||||||||| ||||||||||| || ||||||||    
T  27508679 aaattgactaacatagtctacattcagggactattttgcaatttatctgcattcagggactaaagtga 27508612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 272 - 368
Target Start/End: Original strand, 43257408 - 43257506
Alignment:
Q  272 aaattgaccaacatcgtctacattcaaagactgttttgcaatttctctgcattcagagattaaagtgactact--ttttccattaagggattaaagtga 368  Q
    |||||||| ||||  ||||| |||||| || | ||||||||||| ||||||||||| |||||||||||| |||  ||||| ||| ||||||| ||||||    
T  43257408 aaattgactaacagagtctatattcaaggattattttgcaatttatctgcattcagggattaaagtgacgactcattttctattcagggattgaagtga 43257506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 96 - 171
Target Start/End: Original strand, 45012849 - 45012924
Alignment:
Q  96 attagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatc 171  Q
    |||||||||||| |||||| ||| |||||  ||| |||||||||||| ||||||||| | ||||||||||| ||||    
T  45012849 attagtcactttggtccctgaatgggaaaggagtagtcactttagtctctgaatgcaaagaaattgcaaaacaatc 45012924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 272 - 342
Target Start/End: Original strand, 6441520 - 6441590
Alignment:
Q  272 aaattgaccaacatcgtctacattcaaagactgttttgcaatttctctgcattcagagattaaagtgacta 342  Q
    |||||||| ||||  |||||||||||  || | ||||||||||| |||||||||||||| |||||||||||    
T  6441520 aaattgactaacaaagtctacattcagggattattttgcaatttatctgcattcagagactaaagtgacta 6441590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 122 - 199
Target Start/End: Original strand, 6441371 - 6441447
Alignment:
Q  122 aaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtcaattt 199  Q
    |||||| | |||||| ||||||||||||||| | ||||||||||| | ||| |||||||||||| | |||||||||||    
T  6441371 aaaaaaatagtcactatagtccctgaatgcaaagaaattgcaaaacagtccctgaatgtagactct-ttagtcaattt 6441447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 96 - 199
Target Start/End: Complemental strand, 15000925 - 15000822
Alignment:
Q  96 attagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtca 195  Q
    ||||| ||||||||||||| ||| |||||  ||| ||||||||||||  || |||||||  |||||||||| | ||| | |||||||||| | || ||||    
T  15000925 attagccactttagtccctgaatgggaaatgagtagtcactttagtctttggatgcagaggaattgcaaaacagtccctaaatgtagactttattggtca 15000826  T
Q  196 attt 199  Q
    ||||    
T  15000825 attt 15000822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 96 - 199
Target Start/End: Complemental strand, 36151095 - 36150992
Alignment:
Q  96 attagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtca 195  Q
    |||||||||||||||||||  || | |||  ||| ||||||||| ||| ||||||  || ||||||||||| | | | |||||||||||| |||| ||||    
T  36151095 attagtcactttagtccctggatggaaaatgagtagtcactttaatccttgaatgttgagaaattgcaaaacagtacctgaatgtagactttgttggtca 36150996  T
Q  196 attt 199  Q
    ||||    
T  36150995 attt 36150992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 96 - 199
Target Start/End: Original strand, 38760994 - 38761095
Alignment:
Q  96 attagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtca 195  Q
    |||||||| |||||||||| ||| ||||| |||| ||||||||||| | |||||| ||| ||||||||||| | ||| || ||||||||| ||||  |||    
T  38760994 attagtca-tttagtccctgaatgggaaagaagtagtcactttagttcgtgaatgtagagaaattgcaaaacagtcc-tggatgtagactctgttgatca 38761091  T
Q  196 attt 199  Q
    ||||    
T  38761092 attt 38761095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 21658689 - 21658747
Alignment:
Q  145 tgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtcaatttagtc 203  Q
    |||||||| | ||||||||||| ||| | |||||||| ||| |||||||||||||||||    
T  21658689 tgaatgcaaagaaattgcaaaacaatacttgaatgtaaactctgttagtcaatttagtc 21658747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 287 - 339
Target Start/End: Original strand, 38761183 - 38761235
Alignment:
Q  287 gtctacattcaaagactgttttgcaatttctctgcattcagagattaaagtga 339  Q
    |||||||||||  |||| ||||||||||| ||||||||||| || ||||||||    
T  38761183 gtctacattcagggactattttgcaatttatctgcattcagggactaaagtga 38761235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 163; Significance: 6e-87; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 92 - 375
Target Start/End: Original strand, 50335437 - 50335722
Alignment:
Q  92 ggagattagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgtta 191  Q
    ||||||||||||||||| ||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||    
T  50335437 ggagattagtcactttaatccctgaataggaaatgagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccatgaatgtagactttgtta 50335536  T
Q  192 gtcaatttagtccctaactgcatactctattagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtcta 291  Q
    ||||||||||||||| | |||| ||||  || || | ||||||||||||||||||| |||| || |||||||||||||| |||||||||||||  |||||    
T  50335537 gtcaatttagtccctgaatgcagactccgttcgtcaatttagtccctgaatgtagactccgctaatcactttagtccctaaaattgaccaacagagtcta 50335636  T
Q  292 cattcaaagactgttttgcaatttctctgcattcagagattaaagtgactac--tttttccattaagggattaaagtgaataattc 375  Q
    ||||||  |||||||||||||||| ||||||||||| |||||||||||||||  ||||||||||  |||| |||||||| ||||||    
T  50335637 cattcagggactgttttgcaatttgtctgcattcagggattaaagtgactactttttttccattctgggactaaagtgactaattc 50335722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 92 - 344
Target Start/End: Original strand, 37607969 - 37608219
Alignment:
Q  92 ggagattagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgtta 191  Q
    |||||||||| |||| ||||||| |||||||||  | | |||| ||||||||||||||||| ||||||||||||||| ||| |||||||||||| |||||    
T  37607969 ggagattagtaactt-agtccctgaataggaaatgaattgtcattttagtccctgaatgcatataaattgcaaaatagtccttgaatgtagactctgtta 37608067  T
Q  192 gtcaatttagtccctaactgcatactctattagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtcta 291  Q
    ||||||||||||| | | |||| ||||| ||||| | |||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||   | ||    
T  37608068 gtcaatttagtccttgaatgcagactctgttagtcaatttagtccttgaatgtagactccgttagtcactttggtccctgaaattgaccaaca-gtttta 37608166  T
Q  292 cattcaaagactgttttgcaatttctctgcattcagagattaaagtgactact 344  Q
    ||||||  |||||||||||||||||||||||||||| || |||| ||||||||    
T  37608167 cattcagggactgttttgcaatttctctgcattcagggactaaaatgactact 37608219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 101 - 344
Target Start/End: Complemental strand, 8097989 - 8097746
Alignment:
Q  101 tcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtcaattta 200  Q
    ||||||||||||||||||||||||  |||  ||||||||||||||||||||||||||||  ||||||| ||||||||| |||| | ||||||||||||||    
T  8097989 tcactttagtccctaaataggaaatgagttttcactttagtccctgaatgcagataaatcacaaaatagtccatgaatatagattctgttagtcaattta 8097890  T
Q  201 gtccctaactgcatactctattagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtctacattcaaag 300  Q
    |||| | | | ||||||| |||||| | |||||| |||||||||||| || |||||||| |||||||| | |||||||||||||| ||||| ||| | ||    
T  8097889 gtccttgaatacatactccattagtcaatttagttcctgaatgtagactctgttagtcattttagtccttaaaattgaccaacatagtctatatttagag 8097790  T
Q  301 actgttttgcaatttctctgcattcagagattaaagtgactact 344  Q
    |||||||||||||||||||||||| ||| | ||||||| |||||    
T  8097789 actgttttgcaatttctctgcatttagaaactaaagtggctact 8097746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 116 - 344
Target Start/End: Original strand, 13735465 - 13735693
Alignment:
Q  116 aataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtcaatttagtccctaactgcata 215  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||| |||   |||||||||| ||||||||||||||||| || | |||| |    
T  13735465 aataggaaagaagtcgtcactttagtccctgaatgcagataaattacaaaatagtcccacaatgtagactctgttagtcaatttagtctctgaatgcaga 13735564  T
Q  216 ctctattagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaaattga-ccaacatcgtctacattcaaagactgttttgcaatt 314  Q
    |||  ||||| | |||||||  | |||||||| |||||||||||||||||||||||||||||| | ||||  |||||||||||  |||||||||||||||    
T  13735565 ctccgttagtcaatttagtcaataaatgtagactccgttagtcactttagtccctgaaattgatcaaacagagtctacattcagggactgttttgcaatt 13735664  T
Q  315 tctctgcattcagagattaaagtgactact 344  Q
    ||| |||||||||||| |||| ||||||||    
T  13735665 tctttgcattcagagactaaa-tgactact 13735693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 93 - 348
Target Start/End: Original strand, 42847022 - 42847270
Alignment:
Q  93 gagattagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtaga--ctatgtt 190  Q
    |||||||||||||||||||| | |||| |||| ||||| ||| |||||||| | ||||||||||||||| |||||||||  ||||||||||   |||| |    
T  42847022 gagattagtcactttagtccttgaataagaaagaagtcctcattttagtccataaatgcagataaattgaaaaataatctttgaatgtagattatatgat 42847121  T
Q  191 agtcaatttagtccctaactgcatactctattagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtct 290  Q
    ||||||||||||  || | |||| ||||  ||||| | |||||||| | |||||||| || |||||||| |        ||||| |||| ||||  ||||    
T  42847122 agtcaatttagtatctgaatgcaaactc-gttagtcaatttagtccataaatgtagactctgttagtcaat--------tgaaactgactaacaaagtct 42847212  T
Q  291 acattcaaagactgttttgcaatttctctgcattcagagattaaagtgactacttttt 348  Q
    |||||||| || ||||||||||||||||||||||||| || |||||||||||||||||    
T  42847213 acattcaaggattgttttgcaatttctctgcattcagggaataaagtgactacttttt 42847270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 96 - 195
Target Start/End: Complemental strand, 42847297 - 42847198
Alignment:
Q  96 attagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtca 195  Q
    |||||||||||||||| ||  ||||||||||||| ||||||||| |||||||||||||| ||||||||||| ||||| |||||||||||| |||||||||    
T  42847297 attagtcactttagtctctggataggaaaaaagtagtcactttattccctgaatgcagagaaattgcaaaacaatccttgaatgtagactttgttagtca 42847198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 92 - 204
Target Start/End: Original strand, 11633190 - 11633302
Alignment:
Q  92 ggagattagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgtta 191  Q
    ||||||||||||||||| ||| | ||||||||| ||||||||||||| || | |||| |||||||||||| |||||| | |||||||||||| |||||||    
T  11633190 ggagattagtcactttaatccatgaataggaaagaagtcgtcactttggttcttgaaagcagataaattgtaaaatagttcatgaatgtagattatgtta 11633289  T
Q  192 gtcaatttagtcc 204  Q
    |||| ||||||||    
T  11633290 gtcactttagtcc 11633302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 96 - 199
Target Start/End: Complemental strand, 50335720 - 50335617
Alignment:
Q  96 attagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtca 195  Q
    ||||||||||||||||||  ||| | |||||||| ||||||||| |||||||||||||| ||||||||||| | ||| |||||||||||| |||| ||||    
T  50335720 attagtcactttagtcccagaatggaaaaaaagtagtcactttaatccctgaatgcagacaaattgcaaaacagtccctgaatgtagactctgttggtca 50335621  T
Q  196 attt 199  Q
    ||||    
T  50335620 attt 50335617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 131 - 375
Target Start/End: Complemental strand, 32374203 - 32373984
Alignment:
Q  131 gtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtcaatttagtccctaactgcatactctattagttactt 230  Q
    ||||||||||||||| |||||| ||||||||||||||| ||||||||||||       |||||||||||||||||| | |||| ||||| ||||| | ||    
T  32374203 gtcactttagtccctaaatgcaaataaattgcaaaatagtccatgaatgta-------ttagtcaatttagtccctgaatgcaaactctgttagtcaatt 32374111  T
Q  231 tagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtctacattcaaagactgttttgcaatttctctgcattcagaga 330  Q
    ||||||||||||||||| |                    |||||||||| ||||  ||||||||||||  |||||||||||| |||| ||||| ||| ||    
T  32374110 tagtccctgaatgtagacta-------------------tgaaattgactaacacagtctacattcaagaactgttttgcaaattctatgcatccaggga 32374030  T
Q  331 ttaaagtgactactttttcc-attaagggattaaagtgaataattc 375  Q
     ||||||||||||| ||||| ||| ||||| |||| ||| ||||||    
T  32374029 ctaaagtgactactctttcctattcagggactaaaatgactaattc 32373984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 96 - 199
Target Start/End: Original strand, 32373986 - 32374088
Alignment:
Q  96 attagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtca 195  Q
    |||||||| |||||||||| ||||||||| | || |||||||||||||||| ||||| | || |||||||| | | | |||||||||||| |||||||||    
T  32373986 attagtcattttagtccctgaataggaaaga-gtagtcactttagtccctggatgcatagaatttgcaaaacagttcttgaatgtagactgtgttagtca 32374084  T
Q  196 attt 199  Q
    ||||    
T  32374085 attt 32374088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 97 - 181
Target Start/End: Complemental strand, 37608249 - 37608165
Alignment:
Q  97 ttagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgta 181  Q
    |||||||||||||||| | ||| |||||  ||| |||| ||||||||||||||||||| ||||||||||| | ||| ||||||||    
T  37608249 ttagtcactttagtccttgaatgggaaaggagtagtcattttagtccctgaatgcagagaaattgcaaaacagtccctgaatgta 37608165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 238 - 359
Target Start/End: Original strand, 11633272 - 11633395
Alignment:
Q  238 tgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtctacattcaaagactgttttgcaatttctctgcattcagagattaaagt 337  Q
    |||||||||| |  ||||||||||||||||| ||||||||||||| |  |||| |||| |  ||||||| | |||||||||| |||||||  | |||| |    
T  11633272 tgaatgtagattatgttagtcactttagtccttgaaattgaccaatagagtctgcatttagggactgttatacaatttctctacattcaggaactaaaat 11633371  T
Q  338 gactact--ttttccattaaggga 359  Q
    |||||||  ||||||||| |||||    
T  11633372 gactactcattttccattcaggga 11633395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 272 - 373
Target Start/End: Complemental strand, 50335544 - 50335441
Alignment:
Q  272 aaattgaccaacatcgtctacattcaaagactgttttgcaatttctctgcattcagagattaaagtgactact--ttttccattaagggattaaagtgaa 369  Q
    |||||||| ||||  |||||||||||  |||| ||||||||||| ||||||||||| || ||||||||| |||  ||| | ||| ||||||||||||||     
T  50335544 aaattgactaacaaagtctacattcatggactattttgcaatttatctgcattcagggactaaagtgacgactcatttcctattcagggattaaagtgac 50335445  T
Q  370 taat 373  Q
    ||||    
T  50335444 taat 50335441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 96 - 190
Target Start/End: Complemental strand, 13735723 - 13735631
Alignment:
Q  96 attagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgtt 190  Q
    ||||||||||||||||  ||||| |||||  ||| |||| ||||||| ||||||||| | ||||||||||| | ||| |||||||||||| ||||    
T  13735723 attagtcactttagtca-taaatgggaaaggagtagtca-tttagtctctgaatgcaaagaaattgcaaaacagtccctgaatgtagactctgtt 13735631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 92 - 124
Target Start/End: Original strand, 13735418 - 13735450
Alignment:
Q  92 ggagattagtcactttagtccctaaataggaaa 124  Q
    ||||||||||||||||||||||| |||||||||    
T  13735418 ggagattagtcactttagtcccttaataggaaa 13735450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 340
Target Start/End: Complemental strand, 37608075 - 37608007
Alignment:
Q  272 aaattgaccaacatcgtctacattcaaagactgttttgcaatttctctgcattcagagattaaagtgac 340  Q
    |||||||| ||||  |||||||||||| |||| ||||||||||| | ||||||||| || |||| ||||    
T  37608075 aaattgactaacagagtctacattcaaggactattttgcaatttatatgcattcagggactaaaatgac 37608007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 148; Significance: 6e-78; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 87 - 375
Target Start/End: Complemental strand, 13753517 - 13753227
Alignment:
Q  87 taaaaggagattagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagacta 186  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||||||| ||| | ||||||||||     
T  13753517 taaagggagattagtcactttagtccctaaataggaaagaagtcgtcattttagtctctgaatgcagataaattgcaaaatagtccctaaatgtagactc 13753418  T
Q  187 tgttagtcaatttagtccctaactgcatactctattagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatc 286  Q
    ||| |||||||||||||| ||| |||| ||||  ||||| | ||||| ||||||| ||||| ||| | ||||||||||||||||||||||||||||||      
T  13753417 tgtaagtcaatttagtccttaaatgcagactccgttagtcaatttagcccctgaaagtagactccatcagtcactttagtccctgaaattgaccaacaga 13753318  T
Q  287 gtctacattcaaagactgttttgcaatttctctgcattcagagattaaagtgactact--ttttccattaagggattaaagtgaataattc 375  Q
    ||||||| ||| | ||||||||||||||||||||||||||  || |||||||||||||  ||||| ||| ||||| |||||||| ||||||    
T  13753317 gtctacactcagatactgttttgcaatttctctgcattcaatgactaaagtgactactcattttctatttagggactaaagtgactaattc 13753227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 95 - 378
Target Start/End: Complemental strand, 21944023 - 21943738
Alignment:
Q  95 gattagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtc 194  Q
    ||||| |||||||||||||| ||||| |||  | |||||| |||||||  |||||||| ||||||||||||||| | |||||||||||||| ||||| ||    
T  21944023 gattaatcactttagtccctgaatagaaaatgaatcgtcattttagtcattgaatgcaaataaattgcaaaatagttcatgaatgtagactctgttaatc 21943924  T
Q  195 aatttagtccctaactgcatactctattagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtctacat 294  Q
    |||||||||||| | |||||||| | ||||| | |||||||  |||||||||| |  |||| |||||||||||||| |||||||| ||||  ||||||||    
T  21943923 aatttagtccctgaatgcatactttgttagtcaatttagtctttgaatgtagattatgttaatcactttagtccctaaaattgactaacaaagtctacat 21943824  T
Q  295 tcaaagactgttttgcaatttctctgcattcagagattaaagtgactact--ttttccattaagggattaaagtgaataattctcc 378  Q
    |||| | ||||||||||||||||||||||||||  | |||||||||||||  ||| ||||| | ||| |||||||| |||||||||    
T  21943823 tcaaggtctgttttgcaatttctctgcattcaggtactaaagtgactactcatttcccattcaaggactaaagtgactaattctcc 21943738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 98 - 375
Target Start/End: Complemental strand, 10760284 - 10760006
Alignment:
Q  98 tagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtcaat 197  Q
    ||||||||||| ||||| |||||||||  || ||||||||||||| ||||||||||||||||||||||||| ||| | |||||||||| ||| |||||||    
T  10760284 tagtcactttaatccctgaataggaaatgagccgtcactttagtctctgaatgcagataaattgcaaaatagtccctaaatgtagactctgtaagtcaat 10760185  T
Q  198 ttagtccctaactgcatactctattagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtctacattca 297  Q
    ||||||||| | |||| ||||  ||||| | ||||||||||||||||||| ||||||| ||| |||||||| |||||||||||||||  || ||||||||    
T  10760184 ttagtccctgaatgcagactccgttagtcaatttagtccctgaatgtagactccgttaatca-tttagtccttgaaattgaccaacaaagtttacattca 10760086  T
Q  298 aagactgttttgcaatttctctgcattcagagattaaagtgactact--ttttccattaagggattaaagtgaataattc 375  Q
      ||||||||| |||||||||| |||||||  | ||||||| |||||  ||||||| | |||||  ||||||| ||||||    
T  10760085 gggactgtttttcaatttctctacattcaggaactaaagtggctactcattttccactcagggaccaaagtgactaattc 10760006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 131 - 344
Target Start/End: Original strand, 17497031 - 17497243
Alignment:
Q  131 gtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtcaatttagtccctaactgcatactctattagttactt 230  Q
    |||| |||||||| ||||||  |||||||||||||||| ||| ||||||||| || |||||||||||||||||| | | |||| | ||| ||||||| ||    
T  17497031 gtcattttagtccatgaatgt-gataaattgcaaaatagtccgtgaatgtagtctctgttagtcaatttagtccttgaatgcagattctgttagttaatt 17497129  T
Q  231 tagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtctacattcaaagactgttttgcaatttctctgcattcagaga 330  Q
    ||||||||||||||||| |||||  |||||||||||||||||||||||||||||  |||||||||||  |||| ||||||||||||||||||||||| ||    
T  17497130 tagtccctgaatgtagactccgtcggtcactttagtccctgaaattgaccaacaaagtctacattcagggactattttgcaatttctctgcattcaggga 17497229  T
Q  331 ttaaagtgactact 344  Q
     |||| ||||||||    
T  17497230 ctaaaatgactact 17497243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 94 - 375
Target Start/End: Complemental strand, 30100892 - 30100612
Alignment:
Q  94 agattagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagt 193  Q
    |||||||||| |||||||| | ||||| ||| |||| || | |||||  |||||||| ||||||||||||||||| |||||||||| ||||| ||||| |    
T  30100892 agattagtcattttagtccttgaatagaaaataagttgtaattttaggtcctgaatgtagataaattgcaaaatagtccatgaatgcagactctgttaat 30100793  T
Q  194 caatttagtccctaactgcatactctattagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtctaca 293  Q
    || |||||||||| | |||| |||| |||||| | | ||||||||||||||||| || ||| ||||||||||||||||||||||   || |  |||||||    
T  30100792 cactttagtccctgaatgcagactccattagtcaatatagtccctgaatgtagactctgtttgtcactttagtccctgaaattg---aataaagtctaca 30100696  T
Q  294 ttcaaagactgttttgcaatttctctgcattcagagattaaagtgactact-ttttc-cattaagggattaaagtgaataattc 375  Q
    ||||| || |||||||||||||||||||||| || |||||||||||||||| ||||| || | ||||| |||||||| ||||||    
T  30100695 ttcaaggattgttttgcaatttctctgcatttagggattaaagtgactactcttttctcacttagggactaaagtgactaattc 30100612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 93 - 342
Target Start/End: Original strand, 2555436 - 2555685
Alignment:
Q  93 gagattagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttag 192  Q
    ||||||||||||||||| | || | |||||||  |||||| |||||||||||||||| || ||| ||||||||||| ||  |||||||||||| ||||||    
T  2555436 gagattagtcactttagcctctgagtaggaaatgagtcgtaactttagtccctgaatacaaatatattgcaaaatagtctctgaatgtagactctgttag 2555535  T
Q  193 tcaatttagtccctaactgcatactctattagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtctac 292  Q
    |||||||||||  | | |||| |||   ||||| |  |||||||||||| ||||| | |||||||||||||| ||||||||||||||||||   ||||||    
T  2555536 tcaatttagtcgttgaatgcagacttcgttagtcaaattagtccctgaacgtagacttcgttagtcactttaatccctgaaattgaccaacgcagtctac 2555635  T
Q  293 attcaaagactgttttgcaatttctctgcattcagagattaaagtgacta 342  Q
    |||||  |||||||||||||||| |||||||| ||||| |||||| ||||    
T  2555636 attcagggactgttttgcaatttttctgcatttagagactaaagtaacta 2555685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 92 - 317
Target Start/End: Complemental strand, 19564942 - 19564713
Alignment:
Q  92 ggagattagtcactttagtccct----aaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactat 187  Q
    |||||||||||||||||||||||    ||||||||||  ||||||||||||||||| |||||| ||||||||||||||||| |   |||||||| |||      
T  19564942 ggagattagtcactttagtccctccctaaataggaaatcagtcgtcactttagtccttgaatggagataaattgcaaaatagtttttgaatgtaaacttc 19564843  T
Q  188 gttagtcaatttagtccctaactgcatactctattagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcg 287  Q
    ||||||||||||| ||| | | | |||||||  ||||| | ||||||| ||||||||||| ||| ||| |||||||||||||||||||||| || ||  |    
T  19564842 gttagtcaatttattccttgattccatactccgttagtcaatttagtctctgaatgtagactccattaatcactttagtccctgaaattgatcaccagag 19564743  T
Q  288 tctacattcaaagactgttttgcaatttct 317  Q
    |||||||| | | |||||||||||||||||    
T  19564742 tctacatttagaaactgttttgcaatttct 19564713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 97 - 344
Target Start/End: Original strand, 19491673 - 19491920
Alignment:
Q  97 ttagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtcaa 196  Q
    ||||||||||| |||||| ||||||||| || |  |||||||||||  |||||||||||||||||||||||| |  ||||||||| ||||||||||||||    
T  19491673 ttagtcactttggtccctgaataggaaagaaattatcactttagtctatgaatgcagataaattgcaaaatagtttatgaatgtatactatgttagtcaa 19491772  T
Q  197 tttagtccctaactgcatactctattagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtctacattc 296  Q
     |||||  || | |||| |||   ||| | | |||||||||||||| |||| || ||||||||| ||| ||| |||||||||| ||||  |||||| |||    
T  19491773 cttagtatctgaatgcagacttcgttaatcaatttagtccctgaatttagactcagttagtcacattaatccttgaaattgactaacagagtctacgttc 19491872  T
Q  297 aaagactgttttgcaatttctctgcattcagagattaaagtgactact 344  Q
    ||  ||||||||||||||||||||||||||  || | |||||||||||    
T  19491873 aagcactgttttgcaatttctctgcattcaaggacttaagtgactact 19491920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 221 - 368
Target Start/End: Complemental strand, 21211571 - 21211422
Alignment:
Q  221 ttagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtctacattcaaagactgttttgcaatttctctg 320  Q
    ||||||| ||||||| ||||||||||| | |||||||||||||||| |||||||||||||||||  ||||||||||| ||||||||||||||||| ||||    
T  21211571 ttagttaatttagtctctgaatgtagattgcgttagtcactttagttcctgaaattgaccaacaaagtctacattcagagactgttttgcaatttttctg 21211472  T
Q  321 cattcagagattaaagtgactact--ttttccattaagggattaaagtga 368  Q
    ||||||| || |||||||||||||  ||| ||||| ||||| ||||||||    
T  21211471 cattcagggactaaagtgactactcatttcccattcagggactaaagtga 21211422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 92 - 307
Target Start/End: Original strand, 30852582 - 30852790
Alignment:
Q  92 ggagattagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgtta 191  Q
    ||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||| ||||||||       ||| | | |||||||| ||| |||||    
T  30852582 ggagattagtcactttagtccttgaataggaaataagtcgtcactttagtccctgaatacagataaa-------atagttcctgaatgtaaactctgtta 30852674  T
Q  192 gtcaatttagtccctaactgcatactctattagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtcta 291  Q
    ||||||||||||||| | |||| |||   | ||| | ||||||| ||||||||||| |||||||||||||||||| | |||||||||||||||  |||||    
T  30852675 gtcaatttagtccctgaatgcagacttcgtaagtcaatttagtctctgaatgtagattccgttagtcactttagttcatgaaattgaccaacagagtcta 30852774  T
Q  292 cattcaaagactgttt 307  Q
    || |||  ||||||||    
T  30852775 caatcagggactgttt 30852790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 99 - 375
Target Start/End: Complemental strand, 31912472 - 31912194
Alignment:
Q  99 agtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtcaatt 198  Q
    ||||||||||||  || ||||||||| ||||||||| |||||||| | |||| | |||||||| |||||||| | |||||||||| ||||||  || |||    
T  31912472 agtcactttagtttctgaataggaaagaagtcgtcattttagtccataaatgtaaataaattgtaaaataattcttgaatgtagattatgttgatcgatt 31912373  T
Q  199 tagtccctaactgcatactctattagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtctacattcaa 298  Q
    |||||| | | | || ||||  ||||| | |||||||  | | |||||| || ||||||||||||||||| |||||||||| ||| | |||||| || ||    
T  31912372 tagtccttgaatacagactccgttagtcaatttagtcatttactgtagactctgttagtcactttagtccatgaaattgactaacgttgtctacgttaaa 31912273  T
Q  299 agactgttttgcaatttctctgcattcagagattaaagtgacta--ctttttccattaagggattaaagtgaataattc 375  Q
     ||||||||| |||| ||||||||||||| ||||||| ||||||  ||||| ||||| | ||| |||||||| ||||||    
T  31912272 tgactgttttacaatgtctctgcattcagggattaaaatgactattcttttcccattcaaggactaaagtgactaattc 31912194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 154 - 344
Target Start/End: Complemental strand, 20430098 - 20429908
Alignment:
Q  154 ataaattgcaaaataatccatgaatgtagactatgttagtcaatttagtccctaactgcatactctattagttactttagtccctgaatgtagaatccgt 253  Q
    ||||||||||||||| |   ||||| ||||||  ||||||||||||||| | | | |||| ||||| ||||||| ||||||   |||||||| | || ||    
T  20430098 ataaattgcaaaatagtttttgaatatagactccgttagtcaatttagttcatgaatgcagactctgttagttaatttagtttttgaatgtaaactctgt 20429999  T
Q  254 tagtcactttagtccctgaaattgaccaacatcgtctacattcaaagactgttttgcaatttctctgcattcagagattaaagtgactact 344  Q
    | ||||||||||||| |||||||||||||||  ||||||||||||||||||||||||||||||||||||| |||||  ||||| |||||||    
T  20429998 tcgtcactttagtccttgaaattgaccaacagagtctacattcaaagactgttttgcaatttctctgcatccagaggctaaagcgactact 20429908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 105 - 297
Target Start/End: Original strand, 34419489 - 34419681
Alignment:
Q  105 tttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtcaatttagtcc 204  Q
    ||||||| || ||||| |||  ||||||||||||| || | ||||||||||||||||||||||| ||| ||||||||   | |||||||||||||||||     
T  34419489 tttagtctctgaatagaaaaggagtcgtcactttaatctcagaatgcagataaattgcaaaatagtccctgaatgtaagttctgttagtcaatttagtcg 34419588  T
Q  205 ctaactgcatactctattagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtctacattca 297  Q
     |||  ||| |||   ||||| | |||||||| | |||||||| || ||| |||| ||||||||||||||||||||||||  |||||||||||    
T  34419589 ataaaagcagacttcgttagtcaatttagtccttaaatgtagactctgttggtcattttagtccctgaaattgaccaacaaagtctacattca 34419681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 131 - 298
Target Start/End: Original strand, 11297993 - 11298161
Alignment:
Q  131 gtcactttagtccctgaatgca-gataaattgcaaaataatccatgaatgtagactatgttagtcaatttagtccctaactgcatactctattagttact 229  Q
    ||||||||||| |||||||| | |||||||||||||||||||| ||||  |||||| ||||||||||||||||| || | |||| |||| |||||| | |    
T  11297993 gtcactttagttcctgaatgtaagataaattgcaaaataatccctgaacatagactctgttagtcaatttagtctctgaatgcagactccattagtcaat 11298092  T
Q  230 ttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtctacattcaa 298  Q
    ||||| |||||||||||| || |||| |||||||| ||  | |||||||| ||||  |||| |||||||    
T  11298093 ttagttcctgaatgtagactctgttaatcactttaatctttaaaattgactaacaaagtcttcattcaa 11298161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 122 - 328
Target Start/End: Original strand, 12895554 - 12895758
Alignment:
Q  122 aaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtcaatttagtccctaactgcatactctat 221  Q
    |||||||| || | ||||||  || ||||| ||||||||  |||||| ||   ||||||||||| |||||||||||||| ||| ||| |||| ||||| |    
T  12895554 aaaaaagttgttattttagttactaaatgctgataaattaaaaaatagtctccgaatgtagactttgttagtcaatttaatccttaaatgcagactctgt 12895653  T
Q  222 tagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtctacattcaaagactgttttgcaatttctctgc 321  Q
    |||| | ||||||   | |||||||| | ||||| | |||||||| ||| |||| ||||||||   ||||||||||| ||||||||||||||||||||||    
T  12895654 tagtcaatttagtta-taaatgtagacttcgttaattactttagtacctaaaat-gaccaacaaaatctacattcaacgactgttttgcaatttctctgc 12895751  T
Q  322 attcaga 328  Q
    |||||||    
T  12895752 attcaga 12895758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 98 - 199
Target Start/End: Original strand, 21211419 - 21211520
Alignment:
Q  98 tagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtcaat 197  Q
    ||||||||||||||||| ||| |||||  ||| |||||||||||||||||||||||| ||||||||||| | ||  |||||||||||| |||| ||||||    
T  21211419 tagtcactttagtccctgaatgggaaatgagtagtcactttagtccctgaatgcagaaaaattgcaaaacagtctctgaatgtagactttgttggtcaat 21211518  T
Q  198 tt 199  Q
    ||    
T  21211519 tt 21211520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 96 - 199
Target Start/End: Original strand, 21943743 - 21943846
Alignment:
Q  96 attagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtca 195  Q
    ||||||||||||||||| | ||| |||||  ||| ||||||||||| |||||||||||| ||||||||||| |  || |||||||||||| |||||||||    
T  21943743 attagtcactttagtccttgaatgggaaatgagtagtcactttagtacctgaatgcagagaaattgcaaaacagaccttgaatgtagactttgttagtca 21943842  T
Q  196 attt 199  Q
    ||||    
T  21943843 attt 21943846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 96 - 185
Target Start/End: Original strand, 30100614 - 30100703
Alignment:
Q  96 attagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagact 185  Q
    ||||||||||||||||||||| |  ||||| ||| ||||||||| ||||| |||||||| ||||||||||| ||||| ||||||||||||    
T  30100614 attagtcactttagtccctaagtgagaaaagagtagtcactttaatccctaaatgcagagaaattgcaaaacaatccttgaatgtagact 30100703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 99 - 199
Target Start/End: Complemental strand, 17497271 - 17497171
Alignment:
Q  99 agtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtcaatt 198  Q
    |||||||||||||| | |||  ||||  ||| |||| ||||||||||||||||||| ||||||||||||| ||| |||||||||||| |||| |||||||    
T  17497271 agtcactttagtccgtgaatgagaaatgagtagtcattttagtccctgaatgcagagaaattgcaaaatagtccctgaatgtagactttgttggtcaatt 17497172  T
Q  199 t 199  Q
    |    
T  17497171 t 17497171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 95 - 199
Target Start/End: Complemental strand, 19491952 - 19491848
Alignment:
Q  95 gattagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtc 194  Q
    |||||||||||||||| ||| |||  ||||| ||| ||||||| ||||| |||||||||| ||||||||||| | | | |||| ||||||| ||||||||    
T  19491952 gattagtcactttagttcctgaatgagaaaagagtagtcacttaagtccttgaatgcagagaaattgcaaaacagtgcttgaacgtagactctgttagtc 19491853  T
Q  195 aattt 199  Q
    |||||    
T  19491852 aattt 19491848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 96 - 199
Target Start/End: Original strand, 13753229 - 13753332
Alignment:
Q  96 attagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtca 195  Q
    ||||||||||||||||||||||||| |||  ||| ||||||||||||  |||||||||| ||||||||||| | |   ||| |||||||| |||| ||||    
T  13753229 attagtcactttagtccctaaatagaaaatgagtagtcactttagtcattgaatgcagagaaattgcaaaacagtatctgagtgtagactctgttggtca 13753328  T
Q  196 attt 199  Q
    ||||    
T  13753329 attt 13753332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 262 - 342
Target Start/End: Original strand, 43548938 - 43549018
Alignment:
Q  262 ttagtccctgaaattgaccaacatcgtctacattcaaagactgttttgcaatttctctgcattcagagattaaagtgacta 342  Q
    ||||| ||| |||||||||||||| |||||||||||   |||||||||||||||||||||| |||  || |||||||||||    
T  43548938 ttagttcctaaaattgaccaacatagtctacattcatgtactgttttgcaatttctctgcaatcaaggactaaagtgacta 43549018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 131 - 199
Target Start/End: Complemental strand, 43549016 - 43548948
Alignment:
Q  131 gtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtcaattt 199  Q
    ||||||||||||| ||| |||||| ||||||||||| | | ||||||||||||||||||| ||||||||    
T  43549016 gtcactttagtccttgattgcagagaaattgcaaaacagtacatgaatgtagactatgttggtcaattt 43548948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 96 - 199
Target Start/End: Complemental strand, 2555718 - 2555615
Alignment:
Q  96 attagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtca 195  Q
    ||||||||| ||||||||| ||| ||||| || | || ||||||||| || |||||||| ||||||||||| | ||| ||||||||||||  ||| ||||    
T  2555718 attagtcacgttagtccctgaatgggaaataattagttactttagtctctaaatgcagaaaaattgcaaaacagtccctgaatgtagactgcgttggtca 2555619  T
Q  196 attt 199  Q
    ||||    
T  2555618 attt 2555615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 131 - 168
Target Start/End: Complemental strand, 21211643 - 21211606
Alignment:
Q  131 gtcactttagtccctgaatgcagataaattgcaaaata 168  Q
    ||||||||||||||||||||||||||||||||||||||    
T  21211643 gtcactttagtccctgaatgcagataaattgcaaaata 21211606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 229 - 317
Target Start/End: Complemental strand, 32539413 - 32539326
Alignment:
Q  229 tttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtctacattcaaagactgttttgcaatttct 317  Q
    |||||| | |||||||||| |  ||||||||||||||||| |||||||||  || ||  |||||||||| |||||||||||||||||||    
T  32539413 tttagttcttgaatgtagactatgttagtcactttagtcc-tgaaattgattaatatactctacattcagagactgttttgcaatttct 32539326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 97 - 199
Target Start/End: Original strand, 20429878 - 20429980
Alignment:
Q  97 ttagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtcaa 196  Q
    |||||||||||||||||| |||  ||||  ||| ||| |||||| | ||| ||||||| ||||||||||| | ||  |||||||||||| |||| |||||    
T  20429878 ttagtcactttagtccctgaatgtgaaaggagtagtcgctttagcctctggatgcagagaaattgcaaaacagtctttgaatgtagactctgttggtcaa 20429977  T
Q  197 ttt 199  Q
    |||    
T  20429978 ttt 20429980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 290 - 340
Target Start/End: Complemental strand, 34419565 - 34419515
Alignment:
Q  290 tacattcaaagactgttttgcaatttctctgcattcagagattaaagtgac 340  Q
    ||||||||  |||| ||||||||||| ||||||||| ||||||||||||||    
T  34419565 tacattcagggactattttgcaatttatctgcattctgagattaaagtgac 34419515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 340
Target Start/End: Original strand, 10760198 - 10760251
Alignment:
Q  287 gtctacattcaaagactgttttgcaatttctctgcattcagagattaaagtgac 340  Q
    ||||||||| |  |||| ||||||||||| |||||||||||||| |||||||||    
T  10760198 gtctacatttagggactattttgcaatttatctgcattcagagactaaagtgac 10760251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 287 - 373
Target Start/End: Original strand, 13753420 - 13753508
Alignment:
Q  287 gtctacattcaaagactgttttgcaatttctctgcattcagagattaaagtgactactt-tttcc-attaagggattaaagtgaataat 373  Q
    ||||||||| |  |||| ||||||||||| |||||||||||||| |||| |||| |||| ||||| ||| ||||| |||||||| ||||    
T  13753420 gtctacatttagggactattttgcaatttatctgcattcagagactaaaatgacgacttctttcctatttagggactaaagtgactaat 13753508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 275 - 339
Target Start/End: Complemental strand, 19491772 - 19491708
Alignment:
Q  275 ttgaccaacatcgtctacattcaaagactgttttgcaatttctctgcattcagagattaaagtga 339  Q
    ||||| ||||| || |||||||| | ||| ||||||||||| |||||||||| ||| ||||||||    
T  19491772 ttgactaacatagtatacattcataaactattttgcaatttatctgcattcatagactaaagtga 19491708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 301 - 341
Target Start/End: Original strand, 30852796 - 30852836
Alignment:
Q  301 actgttttgcaatttctctgcattcagagattaaagtgact 341  Q
    ||||||||||||||||||| ||||||| || ||||||||||    
T  30852796 actgttttgcaatttctctccattcagtgactaaagtgact 30852836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 145; Significance: 3e-76; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 92 - 373
Target Start/End: Complemental strand, 25149521 - 25149238
Alignment:
Q  92 ggagattagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgtta 191  Q
    ||||||||||||||||||||||| |||||||||  |||||||||| ||||| ||||||||||||||| ||||||||||||  |||||||||||| |||||    
T  25149521 ggagattagtcactttagtccctgaataggaaatgagtcgtcactatagtctctgaatgcagataaactgcaaaataatctctgaatgtagactttgtta 25149422  T
Q  192 gtcaatttagtccctaactgcatactctattagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtcta 291  Q
    |||||||||||| || | |||| ||||| ||||| |  |||||||||||| |||||  ||||| ||||||||||||| |||||||||||||||  |||||    
T  25149421 gtcaatttagtctctgaatgcagactctgttagtcaagttagtccctgaacgtagacaccgttcgtcactttagtccttgaaattgaccaacagagtcta 25149322  T
Q  292 cattcaaagactgttttgcaatttctctgcattcagagattaaagtgacta--ctttttccattaagggattaaagtgaataat 373  Q
    ||||||  |||||||||||||||||| ||||||||| ||||||||||||||  ||||||||||| ||||| |||| ||| ||||    
T  25149321 cattcagggactgttttgcaatttctttgcattcagggattaaagtgactactctttttccattcagggactaaaatgactaat 25149238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 92 - 342
Target Start/End: Original strand, 35202594 - 35202845
Alignment:
Q  92 ggagattagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgtta 191  Q
    |||||||||||| |||||||  | ||||||||| ||||  ||| ||||||||||||||||| ||||||||||||||  ||| | ||||||||||||||||    
T  35202594 ggagattagtcattttagtcattgaataggaaagaagttatcattttagtccctgaatgcaaataaattgcaaaatggtccttaaatgtagactatgtta 35202693  T
Q  192 gtcaatttagtccctaactgcatactctattagttactttagtccc-tgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtct 290  Q
    ||||||||||| ||| | |||| | ||| ||||| | ||||||||| |||||||||| |||||||||||||||||| |||||||||||||||||  ||      
T  35202694 gtcaatttagttcctgaatgcagattctgttagtcaatttagtcccctgaatgtagactccgttagtcactttagttcctgaaattgaccaacagagtaa 35202793  T
Q  291 acattcaaagactgttttgcaatttctctgcattcagagattaaagtgacta 342  Q
    |||||||  ||||||||||||||||||||||||||||  | |||||||||||    
T  35202794 acattcagggactgttttgcaatttctctgcattcaggaactaaagtgacta 35202845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 94 - 375
Target Start/End: Original strand, 18323997 - 18324278
Alignment:
Q  94 agattagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagt 193  Q
    |||||||||||||||||| || || ||||||   ||||||| |||||| | ||||||||||||||||| |||||| ||| |||||||||||| | |||||    
T  18323997 agattagtcactttagtcgctgaacaggaaat--gtcgtcattttagttcatgaatgcagataaattgtaaaatagtccctgaatgtagactttattagt 18324094  T
Q  194 caatttagtccctaactgcatactctattagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtctaca 293  Q
    ||||||||| ||| | |||| ||||  ||||| | |||||||| | |||||||| |||||||||||||||||| | |||||||||||| ||  ||| |||    
T  18324095 caatttagttcctgaatgcaaactccgttagtcaatttagtccttaaatgtagactccgttagtcactttagttcatgaaattgaccagcagagtcgaca 18324194  T
Q  294 ttcaaagactgttttgcaatttctctgcattcagagattaaagtgactac-tttttc-cattaagggattaaagtgaataattc 375  Q
    ||||  |||||||||||||||||||||||||||| || |||| ||||||| | |||| |||| |||||||||| ||| ||||||    
T  18324195 ttcatggactgttttgcaatttctctgcattcagggactaaaatgactacgtctttctcattcagggattaaaatgattaattc 18324278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 94 - 375
Target Start/End: Complemental strand, 23976370 - 23976088
Alignment:
Q  94 agattagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagt 193  Q
    ||||||||||||||||||| | |||| ||||  |||||||| |||||| |||||||| |||||||||| |||||| ||| ||||||||| || |||||||    
T  23976370 agattagtcactttagtcc-tcaataagaaatgagtcgtcattttagttcctgaatgtagataaattgtaaaatagtccctgaatgtag-ctctgttagt 23976273  T
Q  194 caatttagtccctaactgcatactctattagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtctaca 293  Q
    |||||||| |||| | |||| ||||  || || | ||||| |||||||||||||    ||||||||||||| |||||||||||||| ||||  |||||||    
T  23976272 caatttagcccctgaatgcagactccgttggtcaatttagcccctgaatgtagatcatgttagtcactttactccctgaaattgactaacagagtctaca 23976173  T
Q  294 ttcaaagactgttttgcaatttctctgcattcagagattaaagtgacta---ctttttccattaagggattaaagtgaataattc 375  Q
    ||||  ||||||||||||||||||||||||||||  | |||||||||||   ||||||||||| | ||| |||||||| ||||||    
T  23976172 ttcagggactgttttgcaatttctctgcattcaggaactaaagtgactacttctttttccattcaaggactaaagtgactaattc 23976088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 94 - 375
Target Start/End: Complemental strand, 22469713 - 22469431
Alignment:
Q  94 agattagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagt 193  Q
    ||||||||||||||||||  | |||| ||||  ||||||||||||||||| | ||||||||||||||| |||||| | |  ||||||||| | |||||||    
T  22469713 agattagtcactttagtctatgaataagaaatgagtcgtcactttagtccttaaatgcagataaattgtaaaatagttccagaatgtagattctgttagt 22469614  T
Q  194 caatttagtccctaactgcatactctattagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtctaca 293  Q
    ||||||| ||||| | | || |||| |||||| | |||||||||||||| || | |||||||||||| ||| |||||||||||||||||||  |||| ||    
T  22469613 caatttaatccctgaattcaaactccattagtcaatttagtccctgaat-taaactccgttagtcaccttaatccctgaaattgaccaacagagtctgca 22469515  T
Q  294 ttcaaagactgttttgcaatttctctgcattcagagattaaagtgactact--ttttccattaagggattaaagtgaataattc 375  Q
    ||||  |||||||||||||||||||| |||||||  |  |||||| |||||  ||| ||||| |||||||||||||| ||||||    
T  22469514 ttcagggactgttttgcaatttctctacattcaggaacgaaagtggctactcctttcccattcagggattaaagtgactaattc 22469431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 96 - 316
Target Start/End: Complemental strand, 37544071 - 37543851
Alignment:
Q  96 attagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtca 195  Q
    ||||||||||||||||||| |||| |||| |||||| || ||||||||||||||| ||||||||||||||||| ||  ||| |||||||| |||||||||    
T  37544071 attagtcactttagtccctgaatatgaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtca 37543972  T
Q  196 atttagtccctaactgcatactctattagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtctacatt 295  Q
    ||||| ||||| | |||| | ||  ||||||| |||||||||||||| |||| ||||||| |||||||||||| ||||||||||||| |  || ||||||    
T  37543971 atttaatccctgaatgcagattccgttagttaatttagtccctgaatatagactccgttaatcactttagtccatgaaattgaccaataaagtttacatt 37543872  T
Q  296 caaagactgttttgcaatttc 316  Q
    ||   ||| ||||||||||||    
T  37543871 catgaactattttgcaatttc 37543851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 96 - 241
Target Start/End: Complemental strand, 12107114 - 12106969
Alignment:
Q  96 attagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtca 195  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| ||||| | |    
T  12107114 attagtcactttagtctctaaataggaaagaagtcgtcactttagtccttgaatgcagataaattgcaaaataatccctgaatgtagactctgttaatta 12107015  T
Q  196 atttagtccctaactgcatactctattagttactttagtccctgaa 241  Q
    | ||||||||||| || | |||   || || |||||||||||||||    
T  12107014 aattagtccctaaatgtagactgcgttcgtcactttagtccctgaa 12106969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 94 - 348
Target Start/End: Complemental strand, 4289206 - 4288949
Alignment:
Q  94 agattagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagt 193  Q
    |||||| |||| | ||||| | ||||| ||| ||||||||| ||||||||  |||||||||||| |||||||||| ||  |||| | |||||||||||||    
T  4289206 agattaatcacgtcagtccttgaatagaaaagaagtcgtcattttagtccacgaatgcagataagttgcaaaatagtctttgaacgcagactatgttagt 4289107  T
Q  194 caatttagtccctaactgcatactctattagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgacca---acatcgtct 290  Q
    |||||||||| |||| |||| ||| | ||| | | |||||||  |||||||||| || ||||||||||||| |||||||||||||| |   | |  ||||    
T  4289106 caatttagtctctaaatgcagactatgttaatcaatttagtctttgaatgtagactctgttagtcactttaatccctgaaattgactaattaaagagtct 4289007  T
Q  291 acattcaaagactgttttgcaatttctctgcattcagagattaaagtgactacttttt 348  Q
    |||||| | || ||||||||||||||||| ||||||   | |||||||||||||||||    
T  4289006 acattcgaggaatgttttgcaatttctctacattcatgaactaaagtgactacttttt 4288949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 230 - 375
Target Start/End: Complemental strand, 12107012 - 12106865
Alignment:
Q  230 ttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtctacattcaaagactgttttgcaatttctctgcattcagag 329  Q
    ||||||||| |||||||| | |||| |||||||||||||||||||||||||||||  |||||||| ||  |||||||||||||||||||||||||||| |    
T  12107012 ttagtccctaaatgtagactgcgttcgtcactttagtccctgaaattgaccaacagagtctacatccagggactgttttgcaatttctctgcattcaggg 12106913  T
Q  330 attaaagtgactact--ttttccattaagggattaaagtgaataattc 375  Q
    | |||||||||||||  ||| ||||| ||||| |||||||| ||||||    
T  12106912 actaaagtgactactcatttcccattcagggactaaagtgactaattc 12106865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 133 - 335
Target Start/End: Complemental strand, 22326648 - 22326446
Alignment:
Q  133 cactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtcaatttagtccctaactgcatactctattagttacttta 232  Q
    ||||||||||| ||||||||||||||||| |||||||||| | ||| |||| | ||||| ||||||||||| || | |||| | |   ||||    ||||    
T  22326648 cactttagtccttgaatgcagataaattgtaaaataatccttaaatatagattttgttaatcaatttagtctctgaatgcagatttcgttagcctattta 22326549  T
Q  233 gtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtctacattcaaagactgttttgcaatttctctgcattcagagatt 332  Q
    || |||||||||||| ||||||| |||||||||||||| ||||||||||| |  |||||||||||| |||| |||| ||||||||| ||||||||||| |    
T  22326548 gttcctgaatgtagattccgttaatcactttagtccctaaaattgaccaatagagtctacattcaaggactattttacaatttctcagcattcagagact 22326449  T
Q  333 aaa 335  Q
    |||    
T  22326448 aaa 22326446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 94 - 279
Target Start/End: Complemental strand, 41358963 - 41358778
Alignment:
Q  94 agattagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagt 193  Q
    ||||||||||||||| | ||  || || ||| ||||||||  |||| ||| |||||| ||||||||||||||||| ||| |||||||||||| ||||| |    
T  41358963 agattagtcactttaattcccgaaaagaaaagaagtcgtccttttaatccatgaatgtagataaattgcaaaatagtccctgaatgtagactctgttaat 41358864  T
Q  194 caatttagtccctaactgcatactctattagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgac 279  Q
    ||||||||||| | | |||| ||| |||| |||||||| ||| ||||||||||| |  |||||||||||||||| |||||||||||    
T  41358863 caatttagtccatgaatgcagactttatttgttacttttgtctctgaatgtagactttgttagtcactttagtctctgaaattgac 41358778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 94 - 245
Target Start/End: Original strand, 22426845 - 22426995
Alignment:
Q  94 agattagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagt 193  Q
    ||||||||||||||||||||| |||||||||  |||| |||||||||||| ||||||| |||||||||||||||| ||| ||||||||| || |||||||    
T  22426845 agattagtcactttagtccctgaataggaaacgagtcatcactttagtccatgaatgc-gataaattgcaaaatagtccctgaatgtagtctctgttagt 22426943  T
Q  194 caatttagtccctaactgcatactctattagttactttagtccctgaatgta 245  Q
    ||||||||||||| | || |  |||| ||||| | ||| |||||||||||||    
T  22426944 caatttagtccctgaatgtagtctcttttagtcaatttggtccctgaatgta 22426995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 174 - 344
Target Start/End: Original strand, 21124437 - 21124607
Alignment:
Q  174 tgaatgtagactatgttagtcaatttagtccctaactgcatactctattagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaa 273  Q
    |||||| |||||  ||||||||||||||||||  | || | ||||  ||||| | |||||||||  | |||||| |||||||| ||||||||||| | ||    
T  21124437 tgaatgcagacttcgttagtcaatttagtcccctagtgtagactccgttagtcaatttagtcccctagtgtagactccgttagccactttagtccataaa 21124536  T
Q  274 attgaccaacatcgtctacattcaaagactgttttgcaatttctctgcattcagagattaaagtgactact 344  Q
    |||||||||||  |||||||||||| |||||||||||||||||||| |||||||  |||||||||||||||    
T  21124537 attgaccaacagagtctacattcaaggactgttttgcaatttctctacattcaggaattaaagtgactact 21124607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 92 - 269
Target Start/End: Original strand, 21124323 - 21124500
Alignment:
Q  92 ggagattagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgtta 191  Q
    ||||||||| | ||||||||||| |||||||||  || ||||||||||||| |||||| |||||||||||||||||| ||  | |||||||||| | |||    
T  21124323 ggagattagccgctttagtccctgaataggaaaggagacgtcactttagtctctgaatacagataaattgcaaaatagtctctaaatgtagactctatta 21124422  T
Q  192 gtcaatttagtccctaactgcatactctattagttactttagtccctgaatgtagaatccgttagtcactttagtccc 269  Q
    ||||||||||||||| | |||| |||   ||||| | |||||||||  | |||||| ||||||||||| |||||||||    
T  21124423 gtcaatttagtccctgaatgcagacttcgttagtcaatttagtcccctagtgtagactccgttagtcaatttagtccc 21124500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 107 - 311
Target Start/End: Complemental strand, 24609294 - 24609090
Alignment:
Q  107 tagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtcaatttagtccct 206  Q
    ||||||||||||||||||  |||| |||||||||| |||||||||| |||||||| |||||| | | || ||||||  | |||||||||||||||| | |    
T  24609294 tagtccctaaataggaaaggagtcttcactttagttcctgaatgcaaataaattgtaaaatagttcttggatgtaggttctgttagtcaatttagttctt 24609195  T
Q  207 aactgcatactctattagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtctacattcaaagactgtt 306  Q
    || |||| ||||| ||| ||| ||||||| ||||||||||| ||  |||||| ||||| || || ||| | ||||||||  ||||||||||  |||||||    
T  24609194 aaatgcagactctgttaattaatttagtctctgaatgtagactcaattagtcgctttaatctctaaaaattaccaacataatctacattcagggactgtt 24609095  T
Q  307 ttgca 311  Q
    |||||    
T  24609094 ttgca 24609090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 170 - 375
Target Start/End: Original strand, 31253980 - 31254178
Alignment:
Q  170 tccatgaatgtagactatgttagtcaatttagtccctaactgcatactctattagttactttagtccctgaatgtagaatccgttagtcactttagtccc 269  Q
    ||||||||||||||||  ||||||||||||||||||| | |||| ||||| ||||| | |||||||||| |||||||| |  ||||||||||||| ||||    
T  31253980 tccatgaatgtagact--gttagtcaatttagtccctgaatgcagactctgttagtcaatttagtccctaaatgtagattttgttagtcactttaatccc 31254077  T
Q  270 tgaaattgaccaacatcgtctacattcaaagactgttttgcaatttctctgcattcagagattaaagtgactactttttccattaagggattaaagtgaa 369  Q
    ||||||| ||||||   |||||||||||| |||    || |||||| |||||||| ||||| |||||||||| | ||| ||||| ||||| |||||| |     
T  31254078 tgaaattaaccaacggagtctacattcaaggac----ttacaatttttctgcatttagagactaaagtgacttc-tttcccatttagggactaaagtaat 31254172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 96 - 206
Target Start/End: Original strand, 21184299 - 21184408
Alignment:
Q  96 attagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtca 195  Q
    ||||||||||||||||||| |||||||||  |||||||||| ||||||| ||||||||||||||||||||||| ||| ||||| || ||| | |||||||    
T  21184299 attagtcactttagtccctgaataggaaatgagtcgtcactctagtccccgaatgcagataaattgcaaaatagtccctgaatataaact-tattagtca 21184397  T
Q  196 atttagtccct 206  Q
    |||||||||||    
T  21184398 atttagtccct 21184408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 96 - 199
Target Start/End: Original strand, 12106867 - 12106970
Alignment:
Q  96 attagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtca 195  Q
    ||||||||||||||||||| ||| |||||  ||| |||||||||||||||||||||||| ||||||||||| | ||| || ||||||||| |||| ||||    
T  12106867 attagtcactttagtccctgaatgggaaatgagtagtcactttagtccctgaatgcagagaaattgcaaaacagtccctggatgtagactctgttggtca 12106966  T
Q  196 attt 199  Q
    ||||    
T  12106967 attt 12106970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 96 - 199
Target Start/End: Original strand, 23976090 - 23976194
Alignment:
Q  96 attagtcactttagtccctaaataggaaaa-aagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtc 194  Q
    ||||||||||||||||| | ||| | |||| |||| ||||||||||| |||||||||||| ||||||||||| | ||| |||||||||||| ||||||||    
T  23976090 attagtcactttagtccttgaatggaaaaagaagtagtcactttagttcctgaatgcagagaaattgcaaaacagtccctgaatgtagactctgttagtc 23976189  T
Q  195 aattt 199  Q
    |||||    
T  23976190 aattt 23976194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 95 - 199
Target Start/End: Original strand, 25149237 - 25149341
Alignment:
Q  95 gattagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtc 194  Q
    ||||||||| |||||||||| ||| | |||| ||| ||||||||| |||||||||||| | ||||||||||| | ||| |||||||||||| |||| |||    
T  25149237 gattagtcattttagtccctgaatggaaaaagagtagtcactttaatccctgaatgcaaagaaattgcaaaacagtccctgaatgtagactctgttggtc 25149336  T
Q  195 aattt 199  Q
    |||||    
T  25149337 aattt 25149341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 231 - 348
Target Start/End: Original strand, 23625105 - 23625222
Alignment:
Q  231 tagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtctacattcaaagactgttttgcaatttctctgcattcagaga 330  Q
    |||| |||||||| ||| || ||| |||| |||||||||||||||||| ||||   |||||||||||   | |||||| |||||||||||||  || |||    
T  23625105 tagtacctgaatgcagactctgttggtcaatttagtccctgaaattgatcaacgcagtctacattcaggaagtgttttacaatttctctgcacccaaaga 23625204  T
Q  331 ttaaagtgactacttttt 348  Q
    ||||||||||||||||||    
T  23625205 ttaaagtgactacttttt 23625222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 229 - 344
Target Start/End: Original strand, 21185795 - 21185910
Alignment:
Q  229 tttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtctacattcaaagactgttttgcaatttctctgcattcaga 328  Q
    |||||| |||||||||| | || ||||||||||||||||| |||||||||||||||  ||||| ||| |  ||  ||||| |||||| || ||||||||     
T  21185795 tttagtacctgaatgtacactcagttagtcactttagtccatgaaattgaccaacagagtctatatttagggaacgtttttcaatttttcagcattcagg 21185894  T
Q  329 gattaaagtgactact 344  Q
    || |||||||||||||    
T  21185895 gactaaagtgactact 21185910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 162 - 247
Target Start/End: Complemental strand, 29585663 - 29585578
Alignment:
Q  162 caaaataatccatgaatgtagactatgttagtcaatttagtccctaactgcatactctattagttactttagtccctgaatgtaga 247  Q
    ||||||| ||| |||||||||||| ||||| |||||||||||||| | |||| ||| | ||||| | |||||||||||||||||||    
T  29585663 caaaatagtccctgaatgtagactttgttattcaatttagtccctgaatgcagactttgttagtcaatttagtccctgaatgtaga 29585578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 106 - 171
Target Start/End: Original strand, 37494325 - 37494390
Alignment:
Q  106 ttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatc 171  Q
    ||||||||| ||||||||| |||| |||||||||||||||||||||||| |||||| |||| ||||    
T  37494325 ttagtccctgaataggaaataagtagtcactttagtccctgaatgcagagaaattgtaaaacaatc 37494390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 251 - 375
Target Start/End: Original strand, 10289353 - 10289478
Alignment:
Q  251 cgttagtcactttagtccctgaaattgaccaacatcgtctacattcaaagactgttttgcaatttctctgcattcagagattaaagtgactact--tttt 348  Q
    ||||||||||||||| || | ||||||||||  |  |||||||||||   |||||||| ||||||||||||||| || ||   |||||||||||  ||||    
T  10289353 cgttagtcactttagcccttaaaattgaccactagagtctacattcaggaactgttttacaatttctctgcatttag-gaactaagtgactactcatttt 10289451  T
Q  349 ccattaagggattaaagtgaataattc 375  Q
    ||||| |||||||||||||| ||||||    
T  10289452 ccatttagggattaaagtgactaattc 10289478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 116 - 206
Target Start/End: Original strand, 23625054 - 23625144
Alignment:
Q  116 aataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtcaatttagtccct 206  Q
    |||||||||  |||| |||||||||||||||||| || ||| |||| |||||| | | |||||| ||||| |||| |||||||||||||||    
T  23625054 aataggaaagtagtcatcactttagtccctgaatacaaatagattgtaaaatagtacctgaatgcagactctgttggtcaatttagtccct 23625144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 131 - 199
Target Start/End: Complemental strand, 18324241 - 18324173
Alignment:
Q  131 gtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtcaattt 199  Q
    |||| ||||||||||||||||||| ||||||||||| | ||||||||||| |||| || | ||||||||    
T  18324241 gtcattttagtccctgaatgcagagaaattgcaaaacagtccatgaatgtcgactctgctggtcaattt 18324173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 94 - 241
Target Start/End: Original strand, 31253933 - 31254081
Alignment:
Q  94 agattagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattg-caaaataatccatgaatgtagactatgttag 192  Q
    |||||||||| ||||||| || ||||||||| ||||| |||||||||||| |||||| |||    | | |||  || ||| |||||| ||||| ||||||    
T  31253933 agattagtcattttagtctctgaataggaaagaagtcatcactttagtccatgaatgtagactgttagtcaatttagtccctgaatgcagactctgttag 31254032  T
Q  193 tcaatttagtccctaactgcatactctattagttactttagtccctgaa 241  Q
    |||||||||||||||| || | | | | ||||| |||||| ||||||||    
T  31254033 tcaatttagtccctaaatgtagattttgttagtcactttaatccctgaa 31254081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 96 - 199
Target Start/End: Complemental strand, 21124638 - 21124535
Alignment:
Q  96 attagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtca 195  Q
    ||||||||||||||| | | |||  ||||  ||| ||||||||| | |||||||| ||| ||||||||||| | ||| |||||||||||| |||| ||||    
T  21124638 attagtcactttagttcttgaatgagaaaggagtagtcactttaattcctgaatgtagagaaattgcaaaacagtccttgaatgtagactctgttggtca 21124539  T
Q  196 attt 199  Q
    ||||    
T  21124538 attt 21124535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 96 - 199
Target Start/End: Original strand, 22469433 - 22469536
Alignment:
Q  96 attagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtca 195  Q
    ||||||||||||| ||||| ||| |||||  ||| | |||||| || |||||||| ||| ||||||||||| | ||| |||||| ||||| |||| ||||    
T  22469433 attagtcactttaatccctgaatgggaaaggagtagccactttcgttcctgaatgtagagaaattgcaaaacagtccctgaatgcagactctgttggtca 22469532  T
Q  196 attt 199  Q
    ||||    
T  22469533 attt 22469536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 96 - 185
Target Start/End: Original strand, 4288922 - 4289011
Alignment:
Q  96 attagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagact 185  Q
    |||||||| |||||||||| | | | |||||||| ||||||||||| | |||||| ||| ||||||||||| | |||  |||||||||||    
T  4288922 attagtcattttagtccctgattggaaaaaaagtagtcactttagttcatgaatgtagagaaattgcaaaacattcctcgaatgtagact 4289011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 96 - 185
Target Start/End: Complemental strand, 23625249 - 23625160
Alignment:
Q  96 attagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagact 185  Q
    |||||||||||||||| || |||||||||||||| ||||||||| ||  ||  |||||| |||||| |||| | | | ||||||||||||    
T  23625249 attagtcactttagtctctgaataggaaaaaagtagtcactttaatctttgggtgcagagaaattgtaaaacacttcctgaatgtagact 23625160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 199
Target Start/End: Complemental strand, 35202843 - 35202775
Alignment:
Q  131 gtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtcaattt 199  Q
    ||||||||||| |||||||||||| ||||||||||| | ||| |||||||  ||| |||| ||||||||    
T  35202843 gtcactttagttcctgaatgcagagaaattgcaaaacagtccctgaatgtttactctgttggtcaattt 35202775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 96 - 199
Target Start/End: Complemental strand, 21185941 - 21185838
Alignment:
Q  96 attagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtca 195  Q
    |||||||||||||||| || |||  ||||  ||| ||||||||||||||||||||| || |||||| ||||   ||| | ||| |||||| |||| ||||    
T  21185941 attagtcactttagtcgctgaatgagaaatgagtagtcactttagtccctgaatgctgaaaaattgaaaaacgttccctaaatatagactctgttggtca 21185842  T
Q  196 attt 199  Q
    ||||    
T  21185841 attt 21185838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 307 - 375
Target Start/End: Original strand, 31250292 - 31250362
Alignment:
Q  307 ttgcaatttctctgcattcagagattaaagtgactact--ttttccattaagggattaaagtgaataattc 375  Q
    |||||||||||||||||| |||||||||||||||| ||  ||||||||| |||   |||||||| ||||||    
T  31250292 ttgcaatttctctgcatttagagattaaagtgacttctccttttccattcaggagctaaagtgattaattc 31250362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 303 - 345
Target Start/End: Complemental strand, 37494387 - 37494345
Alignment:
Q  303 tgttttgcaatttctctgcattcagagattaaagtgactactt 345  Q
    |||||| |||||||||||||||||| || ||||||||||||||    
T  37494387 tgttttacaatttctctgcattcagggactaaagtgactactt 37494345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 340
Target Start/End: Complemental strand, 21124415 - 21124362
Alignment:
Q  287 gtctacattcaaagactgttttgcaatttctctgcattcagagattaaagtgac 340  Q
    ||||||||| | ||||| ||||||||||| |||| ||||||||| |||||||||    
T  21124415 gtctacatttagagactattttgcaatttatctgtattcagagactaaagtgac 21124362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 340
Target Start/End: Original strand, 25149414 - 25149482
Alignment:
Q  272 aaattgaccaacatcgtctacattcaaagactgttttgcaatttctctgcattcagagattaaagtgac 340  Q
    |||||||| ||||  ||||||||||| ||| | ||||||| ||| |||||||||||||| || ||||||    
T  25149414 aaattgactaacaaagtctacattcagagattattttgcagtttatctgcattcagagactatagtgac 25149482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 143; Significance: 5e-75; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 84 - 390
Target Start/End: Original strand, 13536548 - 13536857
Alignment:
Q  84 aaataaaaggagattagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtaga 183  Q
    ||||||| ||||||||||||||||||||||| |||||||||  || |||||||||| | |||||||||||||||||||||||||| ||| ||||||||||    
T  13536548 aaataaagggagattagtcactttagtccctgaataggaaaggagccgtcactttaatgcctgaatgcagataaattgcaaaatagtccctgaatgtaga 13536647  T
Q  184 ctatgttagtcaatttagtccctaactgcatactctattagttactttag-tccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaa 282  Q
    || |||||||||||||||||||| | |||| ||||  ||||| | |||||  ||||||||||||| || |||||||||||||||||||||||| ||||||    
T  13536648 ctctgttagtcaatttagtccctgaatgcagactccgttagtcaatttagccccctgaatgtagactctgttagtcactttagtccctgaaatggaccaa 13536747  T
Q  283 catcgtctacattcaaagactgttttgcaatttctctgcattcagagattaaagtgactact--ttttccattaagggattaaagtgaataattctcctc 380  Q
     |  |||||||||||  ||||||||||||||||||||| ||||||||| |||||||||||||  |||  |||| | ||| |||||||| |||||| |||     
T  13536748 tagagtctacattcagggactgttttgcaatttctctgtattcagagactaaagtgactactcctttctcattcaaggactaaagtgactaattcccctt 13536847  T
Q  381 caaataaact 390  Q
     |||||||||    
T  13536848 aaaataaact 13536857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 93 - 375
Target Start/End: Original strand, 25089149 - 25089433
Alignment:
Q  93 gagattagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttag 192  Q
    |||||||||||||||||||| | ||||||| |  ||||| |||||||||| ||||||||||||||||||||||||| ||| |||||||||||| ||||||    
T  25089149 gagattagtcactttagtccatgaataggagaggagtcgccactttagtctctgaatgcagataaattgcaaaatagtccctgaatgtagactctgttag 25089248  T
Q  193 tcaatttagtccctaactgcatactctattagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtctac 292  Q
    |||||||||||  | | |||| |||| |||||| | ||||||||||||||||||| | | |||||||||||||||| |||||||||||||||| |||||     
T  25089249 tcaatttagtcattgaatgcagactccattagtcaatttagtccctgaatgtagacttcattagtcactttagtccatgaaattgaccaacatagtctat 25089348  T
Q  293 attcaaagactgttttgcaatttctctgcattcagagattaaagtgacta--ctttttccattaagggattaaagtgaataattc 375  Q
    |||||   ||||||||||||||||||||||||||| || |||||||||||  | || |||||| ||||| |||||||| ||||||    
T  25089349 attcaggaactgttttgcaatttctctgcattcagtgactaaagtgactattcattgtccattcagggactaaagtgactaattc 25089433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 92 - 344
Target Start/End: Complemental strand, 19295564 - 19295312
Alignment:
Q  92 ggagattagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgtta 191  Q
    |||||||||||||||||||| || ||||| |||  |||||| ||||||||||||||||||||||||||| ||||||| ||| |||||| ||||| |||||    
T  19295564 ggagattagtcactttagtctctgaatagaaaaggagtcgttactttagtccctgaatgcagataaattacaaaatagtccctgaatgcagactctgtta 19295465  T
Q  192 gtcaatttagtccctaactgcatactctattagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtcta 291  Q
    ||||||||||||||| | |||| |||  |||||| | ||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||| | |||    
T  19295464 gtcaatttagtccctgaatgcagacttcattagtcaatttagtccctgaatgtagactccgttggtcactttagtccctgaaattgactaacatagccta 19295365  T
Q  292 cattcaaagactgttttgcaatttctctgcattcagagattaaagtgactact 344  Q
     ||| |  ||||||||||||||||||| |||||||| || |||||||||||||    
T  19295364 tatttagggactgttttgcaatttctcagcattcagggactaaagtgactact 19295312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 96 - 344
Target Start/End: Complemental strand, 21222746 - 21222496
Alignment:
Q  96 attagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgca--gataaattgcaaaataatccatgaatgtagactatgttagt 193  Q
    |||||||||||| |||||| ||||||||| || |||||||||||||||||||||| |  |||||||||||||||| ||  |||||||| |||||||||||    
T  21222746 attagtcactttggtccctgaataggaaagaaatcgtcactttagtccctgaatgtatagataaattgcaaaatagtctctgaatgtatactatgttagt 21222647  T
Q  194 caatttagtccctaactgcatactctattagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtctaca 293  Q
    ||| |||||| || | |||| |||   ||||| | ||||||||||||||||||| || ||||||||| ||| ||| |||||||||| ||||  ||||||     
T  21222646 caacttagtctctgaatgcagacttcgttagtcaatttagtccctgaatgtagactcagttagtcacattaatccttgaaattgactaacagagtctacg 21222547  T
Q  294 ttcaaagactgttttgcaatttctctgcattcagagattaaagtgactact 344  Q
    ||||| |||||||||||||||||||||||||||  || | |||||||||||    
T  21222546 ttcaaggactgttttgcaatttctctgcattcaaggacttaagtgactact 21222496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 92 - 344
Target Start/End: Complemental strand, 10588154 - 10587918
Alignment:
Q  92 ggagattagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgtta 191  Q
    ||||||||||||||||||||||| |||||||||  ||| ||||||| ||||| |||||||||||||||||||||||| |||||||||||||||| | |||    
T  10588154 ggagattagtcactttagtccctgaataggaaaggagttgtcacttaagtccatgaatgcagataaattgcaaaatagtccatgaatgtagactttatta 10588055  T
Q  192 gtcaatttagtccctaactgcatactctattagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtcta 291  Q
    ||||||||||||| | | |||| ||||  ||||| | ||||||                 ||||||||||||||||||||||||||| |||||| |||||    
T  10588054 gtcaatttagtccttgaatgcagactccgttagtcaatttagt----------------agttagtcactttagtccctgaaattgaacaacatagtcta 10587971  T
Q  292 cattcaaagactgttttgcaatttctctgcattcagagattaaagtgactact 344  Q
    ||||||  |||||||||||||||||||||||||||| || |||||||||||||    
T  10587970 cattcagggactgttttgcaatttctctgcattcagggactaaagtgactact 10587918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 92 - 342
Target Start/End: Original strand, 10862009 - 10862258
Alignment:
Q  92 ggagattagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgtta 191  Q
    |||||||||||| ||||||| || |||   |||  |||||||||||||||||||||||||| || ||||||||  || ||| |||||||||||| |||||    
T  10862009 ggagattagtcattttagtctctgaatgtaaaaggagtcgtcactttagtccctgaatgcaaattaattgcaatgtagtccctgaatgtagactctgtta 10862108  T
Q  192 gtcaatttagtccctaactgcatactctattagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtcta 291  Q
    ||||||| | ||||| |  ||| ||||  ||||| | |||||||||||||| |||| || ||| ||||||||||||||||||||||||||| |  |||||    
T  10862109 gtcaattcaatccctgaaggcagactccgttagtcaatttagtccctgaatatagactctgttcgtcactttagtccctgaaattgaccaata-agtcta 10862207  T
Q  292 cattcaaagactgttttgcaatttctctgcattcagagattaaagtgacta 342  Q
    ||||||   ||||||||||||||||||||||||||| || |||||| ||||    
T  10862208 cattcagctactgttttgcaatttctctgcattcagggactaaagtaacta 10862258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 229 - 375
Target Start/End: Original strand, 26705161 - 26705309
Alignment:
Q  229 tttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtctacattcaaagactgttttgcaatttctctgcattcaga 328  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||||||| |||||||     
T  26705161 tttagtccctgaatgtagaacccgttagtcactttagtccctgaaattgaccaacaacgtctacattcagggactgttttgcaatttctctacattcagg 26705260  T
Q  329 gattaaagtgacta--ctttttccattaagggattaaagtgaataattc 375  Q
    || |||||||||||  ||||||||||| ||| | |||||||| ||||||    
T  26705261 gactaaagtgactactctttttccattcaggaactaaagtgactaattc 26705309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 136 - 344
Target Start/End: Complemental strand, 10672856 - 10672649
Alignment:
Q  136 tttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtcaatttagtccctaactgcatactctattagttactttagtc 235  Q
    |||||||  |||||||||||||||||||||||| | | |||||||||| | ||||| ||||||||||| || | |||||| |   ||||| | |||||||    
T  10672856 tttagtctttgaatgcagataaattgcaaaatagttcctgaatgtagatt-tgttaatcaatttagtctctgaatgcatatttcgttagtcaatttagtc 10672758  T
Q  236 cctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtctacattcaaagactgttttgcaatttctctgcattcagagattaaa 335  Q
    |||||||||||| | ||||||||||| |||| ||||||||| |||||||| |||||||||||  |||||||||  ||||| | |||||||  ||| ||||    
T  10672757 cctgaatgtagacttcgttagtcactatagttcctgaaatttaccaacatagtctacattcagggactgttttataatttttatgcattcgaagactaaa 10672658  T
Q  336 gtgactact 344  Q
    |||||||||    
T  10672657 gtgactact 10672649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 92 - 191
Target Start/End: Original strand, 28752238 - 28752337
Alignment:
Q  92 ggagattagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgtta 191  Q
    ||||||||||||||||||||| | || | |||| |||  ||||||||||| |||||||||||||||||||||||||| |||||||||||||||| |||||    
T  28752238 ggagattagtcactttagtccttgaacaagaaagaagatgtcactttagtacctgaatgcagataaattgcaaaatagtccatgaatgtagactctgtta 28752337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 96 - 199
Target Start/End: Original strand, 10587887 - 10587990
Alignment:
Q  96 attagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtca 195  Q
    ||||||||||||||||| | |||  ||||  ||| |||||||||||||||||||||||| ||||||||||| | ||| |||||||||||||||||  |||    
T  10587887 attagtcactttagtccatgaatgagaaaggagtagtcactttagtccctgaatgcagagaaattgcaaaacagtccctgaatgtagactatgttgttca 10587986  T
Q  196 attt 199  Q
    ||||    
T  10587987 attt 10587990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 96 - 199
Target Start/End: Original strand, 19295281 - 19295384
Alignment:
Q  96 attagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtca 195  Q
    ||||||||||||||||| | |||||||||  ||| ||||||||||||||||||||| || ||||||||||| | ||| | ||| ||| ||||||||||||    
T  19295281 attagtcactttagtccttgaataggaaaggagtagtcactttagtccctgaatgctgagaaattgcaaaacagtccctaaatataggctatgttagtca 19295380  T
Q  196 attt 199  Q
    ||||    
T  19295381 attt 19295384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 96 - 199
Target Start/End: Complemental strand, 26705307 - 26705204
Alignment:
Q  96 attagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtca 195  Q
    ||||||||||||||| ||| ||| | |||| ||| |||||||||||||||||||| ||| ||||||||||| | ||| |||||||||||  |||| ||||    
T  26705307 attagtcactttagttcctgaatggaaaaagagtagtcactttagtccctgaatgtagagaaattgcaaaacagtccctgaatgtagacgttgttggtca 26705208  T
Q  196 attt 199  Q
    ||||    
T  26705207 attt 26705204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 132 - 276
Target Start/End: Complemental strand, 12651325 - 12651182
Alignment:
Q  132 tcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtcaatttagtccctaactgcatactctattagttacttt 231  Q
    |||||||| ||  |||||||||||||||||| ||||||||  ||||| ||||||  |||||||||||| |||||| | |||  ||||| ||||| | |||    
T  12651325 tcactttaatctgtgaatgcagataaattgctaaataatctttgaatatagactccgttagtcaatttggtccctgaatgccgactctgttagtcaattt 12651226  T
Q  232 agtccctgaatgtagaatccgttagtcactttagtccctgaaatt 276  Q
    |||| ||| ||||||| |  |||||||||||||||| || |||||    
T  12651225 agtctctg-atgtagactttgttagtcactttagtctctaaaatt 12651182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 96 - 199
Target Start/End: Original strand, 21222465 - 21222568
Alignment:
Q  96 attagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtca 195  Q
    |||||| |||||||| ||| |||  ||||| ||| ||||||| ||||| |||||||||| ||||||||||| | ||| |||| ||||||| |||||||||    
T  21222465 attagtaactttagttcctgaatgagaaaagagtagtcacttaagtccttgaatgcagagaaattgcaaaacagtccttgaacgtagactctgttagtca 21222564  T
Q  196 attt 199  Q
    ||||    
T  21222565 attt 21222568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 96 - 199
Target Start/End: Complemental strand, 25089431 - 25089328
Alignment:
Q  96 attagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtca 195  Q
    ||||||||||||||||||| ||| |  ||  | | |||||||||||| ||||||||||| ||||||||||| | | | ||||| ||||||||||| ||||    
T  25089431 attagtcactttagtccctgaatggacaatgaatagtcactttagtcactgaatgcagagaaattgcaaaacagttcctgaatatagactatgttggtca 25089332  T
Q  196 attt 199  Q
    ||||    
T  25089331 attt 25089328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 96 - 185
Target Start/End: Complemental strand, 13536840 - 13536751
Alignment:
Q  96 attagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagact 185  Q
    ||||||||||||||||| | |||  ||||  ||| |||||||||||| |||||| |||| ||||||||||| | ||| ||||||||||||    
T  13536840 attagtcactttagtccttgaatgagaaaggagtagtcactttagtctctgaatacagagaaattgcaaaacagtccctgaatgtagact 13536751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 229 - 273
Target Start/End: Original strand, 26705129 - 26705173
Alignment:
Q  229 tttagtccctgaatgtagaatccgttagtcactttagtccctgaa 273  Q
    |||||||||||||| |||||||||||||||| |||||||||||||    
T  26705129 tttagtccctgaatatagaatccgttagtcaatttagtccctgaa 26705173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 272 - 338
Target Start/End: Complemental strand, 25089255 - 25089189
Alignment:
Q  272 aaattgaccaacatcgtctacattcaaagactgttttgcaatttctctgcattcagagattaaagtg 338  Q
    |||||||| ||||  |||||||||||  |||| ||||||||||| |||||||||||||| |||||||    
T  25089255 aaattgactaacagagtctacattcagggactattttgcaatttatctgcattcagagactaaagtg 25089189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 340
Target Start/End: Complemental strand, 13536663 - 13536595
Alignment:
Q  272 aaattgaccaacatcgtctacattcaaagactgttttgcaatttctctgcattcagagattaaagtgac 340  Q
    |||||||| ||||  |||||||||||  |||| ||||||||||| |||||||||||  |||||||||||    
T  13536663 aaattgactaacagagtctacattcagggactattttgcaatttatctgcattcaggcattaaagtgac 13536595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 134 - 166
Target Start/End: Complemental strand, 10862253 - 10862221
Alignment:
Q  134 actttagtccctgaatgcagataaattgcaaaa 166  Q
    ||||||||||||||||||||| |||||||||||    
T  10862253 actttagtccctgaatgcagagaaattgcaaaa 10862221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 287 - 339
Target Start/End: Original strand, 12651273 - 12651325
Alignment:
Q  287 gtctacattcaaagactgttttgcaatttctctgcattcagagattaaagtga 339  Q
    ||||| ||||||||| | ||| ||||||| |||||||||| ||||||||||||    
T  12651273 gtctatattcaaagattatttagcaatttatctgcattcacagattaaagtga 12651325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 132; Significance: 2e-68; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 92 - 342
Target Start/End: Original strand, 48755323 - 48755574
Alignment:
Q  92 ggagattagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgtta 191  Q
    ||||||||||||||||||||||| |||||||||  |||||||||||||||| |||||||||||||| |||||||||| ||| |||||||||||| |||||    
T  48755323 ggagattagtcactttagtccctgaataggaaaggagtcgtcactttagtctctgaatgcagataagttgcaaaatagtccctgaatgtagactctgtta 48755422  T
Q  192 gtcaatttagtccctaactgcatactctattagttactttagtccctgaatgtagaatc-cgttagtcactttagtccctgaaattgaccaacatcgtct 290  Q
    ||||||||||||||| | |||| ||||  ||||| | |||||||| |||||||||| ||  ||||||||||||   ||||||||||||||||||  ||||    
T  48755423 gtcaatttagtccctgaatgcagactccgttagtcaatttagtccatgaatgtagactcgtgttagtcactttgacccctgaaattgaccaacagagtct 48755522  T
Q  291 acattcaaagactgttttgcaatttctctgcattcagagattaaagtgacta 342  Q
    |||||||   ||||||||||||||||||||||||||| || |||||||||||    
T  48755523 acattcaggaactgttttgcaatttctctgcattcagggactaaagtgacta 48755574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 92 - 375
Target Start/End: Original strand, 33343002 - 33343285
Alignment:
Q  92 ggagattagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgtta 191  Q
    ||||||||||||||||||||||| ||||| |||  |||||||||||||||||||||||||||||||||||| ||||  ||| ||||||||||||||||||    
T  33343002 ggagattagtcactttagtccctgaatagaaaatgagtcgtcactttagtccctgaatgcagataaattgctaaatggtccctgaatgtagactatgtta 33343101  T
Q  192 gtcaatttagtccctaactgcatactctattagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtcta 291  Q
    ||||| ||||||||| | |||| ||| | ||||| | ||||||||||||||||||| |  |||| ||| |||||| |||||||||||||||||  || ||    
T  33343102 gtcaa-ttagtccctgaatgcaaactatgttagtcaatttagtccctgaatgtagactttgttaatca-tttagttcctgaaattgaccaacagagttta 33343199  T
Q  292 cattcaaagactgttttgcaatttctctgcattcagagattaaagtgactact--ttttccattaagggattaaagtgaataattc 375  Q
     |||||| ||||||||||||||||||||||||||||  | |||| || |||||  ||| ||||| |||||||||||||| ||||||    
T  33343200 tattcaaggactgttttgcaatttctctgcattcagtaactaaaatgtctactcatttcccattcagggattaaagtgactaattc 33343285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 92 - 342
Target Start/End: Original strand, 1426480 - 1426721
Alignment:
Q  92 ggagattagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgtta 191  Q
    |||||||||||||||||||| || |||||||||  ||||||||||||||  |||||||||||||||||||||||||| | | |||||||||| |||||||    
T  1426480 ggagattagtcactttagtctctgaataggaaatgagtcgtcactttagatcctgaatgcagataaattgcaaaatagttcctgaatgtagattatgtta 1426579  T
Q  192 gtcaatttagtccctaactgcatactctattagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtcta 291  Q
    ||||||||||||||| | |||| ||||  ||||| | |||||||||| |||||||| |||||||||||         ||||||||||||||||  |||||    
T  1426580 gtcaatttagtccctgaatgcagactccgttagtcaatttagtccctaaatgtagactccgttagtca---------ctgaaattgaccaacaaagtcta 1426670  T
Q  292 cattcaaagactgttttgcaatttctctgcattcagagattaaagtgacta 342  Q
    ||||||  |||||||||||||||||||||||||||| ||||||| ||||||    
T  1426671 cattcagtgactgttttgcaatttctctgcattcagggattaaaatgacta 1426721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 92 - 273
Target Start/End: Original strand, 15031184 - 15031365
Alignment:
Q  92 ggagattagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgtta 191  Q
    ||||||||| ||||||||||| | ||| |||||| ||||||||||||||||| ||||||||||||||||| |||||| ||| |||||||||||| |||||    
T  15031184 ggagattagccactttagtccttgaatgggaaaagagtcgtcactttagtccttgaatgcagataaattgtaaaatagtccctgaatgtagactctgtta 15031283  T
Q  192 gtcaatttagtccctaactgcatactctattagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaa 273  Q
    ||||||||||||||| | |||| ||||  ||||| | ||||||| ||||||||||| ||||||||||| ||||||| |||||    
T  15031284 gtcaatttagtccctgaatgcaaactccgttagtcaatttagtcactgaatgtagactccgttagtcaatttagtcactgaa 15031365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 91 - 344
Target Start/End: Original strand, 21514739 - 21514992
Alignment:
Q  91 aggagattagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgtt 190  Q
    |||||||||||||||||||||  | ||||  ||| |||||||||||||||||||||||| ||||||||||| |||||| ||| |||||||||||| ||||    
T  21514739 aggagattagtcactttagtctttgaatataaaagaagtcgtcactttagtccctgaatacagataaattgtaaaatagtccttgaatgtagactctgtt 21514838  T
Q  191 agtcaatttagtccctaactgcatactctattagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtct 290  Q
    ||| |||||||||||| | |||  |||   ||||| | |||||||| ||||||| || || |||||| |||||| ||| ||||||||||||| || ||||    
T  21514839 agttaatttagtccctgaatgcggacttcgttagtcaatttagtccttgaatgtggactctgttagttactttaatccatgaaattgaccaatatagtct 21514938  T
Q  291 acattcaaagactgttttgcaatttctctgcattcagagattaaagtgactact 344  Q
    |||||||  |||||||||| ||||| ||| ||||||  || |||| ||||||||    
T  21514939 acattcagggactgttttgaaatttatctacattcaaggactaaaatgactact 21514992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 122 - 345
Target Start/End: Complemental strand, 11989298 - 11989075
Alignment:
Q  122 aaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtcaatttagtccctaactgcatactctat 221  Q
    |||| |||||||| ||||||| ||| ||| ||||||||||||||||| ||  |   |||||||| ||||||||||| |||||||| | |||| ||||  |    
T  11989298 aaaatagtcgtcattttagtctctgcatgtagataaattgcaaaatagtctctagttgtagactctgttagtcaatctagtccctgaatgcagactccgt 11989199  T
Q  222 tagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtctacattcaaagactgttttgcaatttctctgc 321  Q
    || | | |||||||| | |||||||| |||||||| |||||||||| ||||||||||||||||  ||||| |||||  ||||||||||||||||||||||    
T  11989198 taatcaatttagtccttaaatgtagactccgttagccactttagtctctgaaattgaccaacagagtctatattcagggactgttttgcaatttctctgc 11989099  T
Q  322 attcagagattaaagtgactactt 345  Q
    ||||||||| ||||||||||||||    
T  11989098 attcagagactaaagtgactactt 11989075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 161 - 368
Target Start/End: Complemental strand, 14434854 - 14434645
Alignment:
Q  161 gcaaaataatccatgaatgtagactatgttagtcaatttagtccctaactgcatactctattagttactttagtccctgaatgtagaatccgttagtcac 260  Q
    |||||||| |||||||||||||||| |||||||||||||||||||| | |||| ||||   |||||| ||||||| ||||||||||| |||| |||||||    
T  14434854 gcaaaatagtccatgaatgtagactctgttagtcaatttagtccctgaatgcaaactcagatagttaatttagtctctgaatgtagactccgctagtcac 14434755  T
Q  261 tttagtccctgaaattgaccaacatcgtctacattcaaagactgttttgcaatttctctgcattcagagattaaagtgacta--ctttttccattaaggg 358  Q
    |||||||||||||||| || ||||  |||||||||||| |||||||||||||| |||||||||| |  || |||||||||||  | ||| ||||| | ||    
T  14434754 tttagtccctgaaattaactaacaaagtctacattcaaggactgttttgcaatatctctgcatttacggactaaagtgactattcatttcccattcatgg 14434655  T
Q  359 attaaagtga 368  Q
    ||||||||||    
T  14434654 attaaagtga 14434645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 188 - 375
Target Start/End: Original strand, 15031312 - 15031501
Alignment:
Q  188 gttagtcaatttagtccctaactgcatactctattagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcg 287  Q
    |||||||||||||||| || | || | ||||  ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||  |    
T  15031312 gttagtcaatttagtcactgaatgtagactccgttagtcaatttagtcactgaatgtagactccgttagtcactttagtccctgaaattgaccaacaaag 15031411  T
Q  288 tctacattcaaagactgttttgcaatttctctgcattcagagattaaagtgactact--ttttccattaagggattaaagtgaataattc 375  Q
    |||| ||| |  ||||||||||||||||||||||||||||||| |||||||||||||  ||| ||||| ||||| |||||||| ||||||    
T  15031412 tctagatttagggactgttttgcaatttctctgcattcagagactaaagtgactactcatttcccattcagggactaaagtgactaattc 15031501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 100 - 342
Target Start/End: Original strand, 44967859 - 44968100
Alignment:
Q  100 gtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtcaattt 199  Q
    ||||||||||||| | ||||| |||  ||| |||||||||||||||||||||| ||| ||||||||||| |   |||||||||||| |||||||||||||    
T  44967859 gtcactttagtcctttaatagaaaatgagttgtcactttagtccctgaatgcaaatatattgcaaaatagtttttgaatgtagactctgttagtcaattt 44967958  T
Q  200 agtccctaactgcatactctattagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtctacattcaaa 299  Q
    |||| || | | || || | |||||| | |||||||  |||||||||| ||  |||||||||||| |||||||||||||||||||  ||||||||| |      
T  44967959 agtctctcaatacagaccccattagtcaatttagtctttgaatgtagactctcttagtcactttaatccctgaaattgaccaacaaagtctacatttagg 44968058  T
Q  300 gactgttttgcaatttctctgcattcagagattaaagtgacta 342  Q
    |||||||||||||||| ||| ||||||| || |||||||||||    
T  44968059 gactgttttgcaatttatctacattcag-gactaaagtgacta 44968100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 96 - 241
Target Start/End: Complemental strand, 26498795 - 26498650
Alignment:
Q  96 attagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtca 195  Q
    |||||||||||||||| || |||||||||  |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||    
T  26498795 attagtcactttagtctctgaataggaaatgagtcatcactttagtccctgaatgcagataaattgcaaaatagtccatgaatgtagactcggttagtca 26498696  T
Q  196 atttagtccctaactgcatactctattagttactttagtccctgaa 241  Q
    |||||||| || | |||||||||  ||||| |||||||||||||||    
T  26498695 atttagtcactgaatgcatactccgttagtcactttagtccctgaa 26498650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 163 - 340
Target Start/End: Original strand, 15005025 - 15005202
Alignment:
Q  163 aaaataatccatgaatgtagactatgttagtcaatttagtccctaactgcatactctattagttactttagtccctgaatgtagaatccgttagtcactt 262  Q
    |||||| ||| |||||||||||| |||||||||||||| ||||| | |||| ||||  ||||||| |||||||| |||||||| | |  |||||||||||    
T  15005025 aaaatagtccttgaatgtagactctgttagtcaatttaatccctgaatgcagactcagttagttaatttagtccttgaatgtatactttgttagtcactt 15005124  T
Q  263 tagtccctgaaattgaccaacatcgtctacattcaaagactgttttgcaatttctctgcattcagagattaaagtgac 340  Q
     | ||||||||||||||| |||  ||||||||||| | |||||||||||||||||||||||||||||| |||||||||    
T  15005125 aaatccctgaaattgaccgacagagtctacattcagaaactgttttgcaatttctctgcattcagagactaaagtgac 15005202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 229 - 374
Target Start/End: Complemental strand, 26498694 - 26498547
Alignment:
Q  229 tttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtctacattcaaagactgttttgcaatttctctgcattcaga 328  Q
    ||||||| ||||||| | | ||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||     
T  26498694 tttagtcactgaatgcatactccgttagtcactttagtccctgaaattgaccaacatggtctacattcagggactgttttgcaatttctctgcattcagg 26498595  T
Q  329 gattaaagtgacta--ctttttccattaagggattaaagtgaataatt 374  Q
    || |||||||||||  ||||| ||||| ||||| |||||||| |||||    
T  26498594 gactaaagtgactactcttttcccattcagggactaaagtgactaatt 26498547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 96 - 326
Target Start/End: Complemental strand, 18445684 - 18445454
Alignment:
Q  96 attagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtca 195  Q
    |||||||||||| |||||| ||||||||| || |  |||||||||||| |||||||||||||||||||||||| |   |||||||| |||||||||||||    
T  18445684 attagtcactttggtccctgaataggaaagaaattatcactttagtccatgaatgcagataaattgcaaaatagtttctgaatgtatactatgttagtca 18445585  T
Q  196 atttagtccctaactgcatactctattagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtctacatt 295  Q
    | |||||  || | |||| |||   ||| | | |||| |||| |||| |||| || ||||||||| ||| ||| |||||||||| ||||  |||||| ||    
T  18445584 acttagtatctgaatgcagacttcgttaatcaatttaatcccagaatttagactcagttagtcacattaatccttgaaattgactaacagagtctacgtt 18445485  T
Q  296 caaagactgttttgcaatttctctgcattca 326  Q
    |||  ||||||||||||||||||||||||||    
T  18445484 caagcactgttttgcaatttctctgcattca 18445454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 94 - 238
Target Start/End: Original strand, 38498133 - 38498277
Alignment:
Q  94 agattagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagt 193  Q
    |||||||||| ||||||| || ||||| |||  |||  ||||||||||||||||||||||||||||||||||||| ||||| ||| || ||| |||||||    
T  38498133 agattagtcagtttagtctctgaatagaaaatgagtgatcactttagtccctgaatgcagataaattgcaaaatagtccataaatataaactttgttagt 38498232  T
Q  194 caatttagtccctaactgcatactctattagttactttagtccct 238  Q
    ||||||||||||| | || | ||||||||||| ||||||||||||    
T  38498233 caatttagtccctgaatgtagactctattagtcactttagtccct 38498277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 92 - 326
Target Start/End: Complemental strand, 43562883 - 43562660
Alignment:
Q  92 ggagattagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgtta 191  Q
    |||||||||||| |||||||||| |||||||||  | |||||| ||||||  |||||||||||||||||| |||||| ||| |||||||||| | ||||     
T  43562883 ggagattagtcattttagtccctcaataggaaatgattcgtcattttagtttctgaatgcagataaattgtaaaatagtccttgaatgtagattctgttt 43562784  T
Q  192 gtcaatttagtccctaactgcatactctattagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtcta 291  Q
    ||||||||| ||  | | |||| |||  |||||| | |||| ||||||||||||||   ||||||||||||||||| || ||||||||           |    
T  43562783 gtcaatttaatcgttgaatgcagacttcattagtcaatttaatccctgaatgtagacatcgttagtcactttagtctctaaaattgac-----------a 43562695  T
Q  292 cattcaaagactgttttgcaatttctctgcattca 326  Q
    ||||||| |||||||||||||||||||||||||||    
T  43562694 cattcaaggactgttttgcaatttctctgcattca 43562660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 229 - 375
Target Start/End: Original strand, 38498236 - 38498384
Alignment:
Q  229 tttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtctacattcaaagactgttttgcaatttctctgcattcaga 328  Q
    ||||||||||||||||||| ||  |||||||||||||||||| ||||| || ||||  ||||||||||| ||||| ||||||||||||| |||||||||     
T  38498236 tttagtccctgaatgtagactctattagtcactttagtccctaaaattaactaacaaagtctacattcagagactattttgcaatttctatgcattcagg 38498335  T
Q  329 gattaaagtgactact--ttttccattaagggattaaagtgaataattc 375  Q
    || |||||||||||||  |||  |||| |||||||||||||| ||||||    
T  38498336 gactaaagtgactactcctttctcattcagggattaaagtgactaattc 38498384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 91 - 366
Target Start/End: Original strand, 26920151 - 26920427
Alignment:
Q  91 aggagattagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgtt 190  Q
    ||||||||| |||||||||||| ||| ||| |||  |||  | |||||||||| |||||  | ||||||||||||||| ||  | ||| |||||| | ||    
T  26920151 aggagattaatcactttagtccttaa-tagcaaatgagttataactttagtccatgaatctaaataaattgcaaaatagtctctaaatatagactctatt 26920249  T
Q  191 agtcaatttagtccctaactgcatactctattagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtct 290  Q
    ||| |||||||| ||| | || |||||   ||||| | |||||||| | |||||||  ||| |||||||||||| ||||||||||||| |||||  || |    
T  26920250 agttaatttagttcctcaatgtatacttcgttagtcaatttagtccttaaatgtaggctccattagtcactttaatccctgaaattgatcaacaaagtat 26920349  T
Q  291 acattcaaagactgttttgcaatttctctgcattcagagattaaagtgactact--ttttccattaagggattaaagt 366  Q
    ||||||||  ||||||||||||||| |||||||||| ||| |||||| ||||||  ||||| ||| ||| ||||||||    
T  26920350 acattcaagaactgttttgcaatttttctgcattcatagactaaagtaactactacttttctattcaggaattaaagt 26920427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 91 - 199
Target Start/End: Original strand, 26498543 - 26498651
Alignment:
Q  91 aggagattagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgtt 190  Q
    |||| ||||||||||||||||||| ||| |||||| ||| |||||||||||||||||||||||| ||||||||||| | ||| ||||||||||| |||||    
T  26498543 aggaaattagtcactttagtccctgaatgggaaaagagtagtcactttagtccctgaatgcagagaaattgcaaaacagtccctgaatgtagaccatgtt 26498642  T
Q  191 agtcaattt 199  Q
     ||||||||    
T  26498643 ggtcaattt 26498651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 231 - 345
Target Start/End: Original strand, 39541745 - 39541859
Alignment:
Q  231 tagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtctacattcaaagactgttttgcaatttctctgcattcagaga 330  Q
    |||||||||||| |||| |  |||||||||||| |||| | |||||||||||||  ||||||||||| |||||||||| |||||||||||||||||| ||    
T  39541745 tagtccctgaatatagattatgttagtcacttttgtccttaaaattgaccaacagagtctacattcagagactgttttacaatttctctgcattcaggga 39541844  T
Q  331 ttaaagtgactactt 345  Q
     ||||||||||||||    
T  39541845 ctaaagtgactactt 39541859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 215 - 344
Target Start/End: Original strand, 20759046 - 20759175
Alignment:
Q  215 actctattagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtctacattcaaagactgttttgcaatt 314  Q
    ||||||||||| | ||||||||||||   |||| |  |||||||||||||||||||||||||||| ||||  |||||||||||| |||| ||||||||||    
T  20759046 actctattagtcaatttagtccctgagaatagactatgttagtcactttagtccctgaaattgactaacaaagtctacattcaaggactattttgcaatt 20759145  T
Q  315 tctctgcattcagagattaaagtgactact 344  Q
    ||||||||||||  || |||| ||||||||    
T  20759146 tctctgcattcaaggactaaaatgactact 20759175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 89 - 202
Target Start/End: Original strand, 42453036 - 42453149
Alignment:
Q  89 aaaggagattagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatg 188  Q
    |||||||||||||||||||| ||| | ||||| |||  ||||||||||||||||  |||||||| ||||||||||||||| ||| | |||||||||| ||    
T  42453036 aaaggagattagtcactttaatccttgaatagaaaatgagtcgtcactttagtctatgaatgcaaataaattgcaaaatagtccctaaatgtagactctg 42453135  T
Q  189 ttagtcaatttagt 202  Q
    ||||||||||||||    
T  42453136 ttagtcaatttagt 42453149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 92 - 204
Target Start/End: Original strand, 39541670 - 39541782
Alignment:
Q  92 ggagattagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgtta 191  Q
    ||||||||||| |||||||| || |||||||||  |||||||||||||||| |||||||||||||||||||||| || ||| ||||| |||| |||||||    
T  39541670 ggagattagtcgctttagtcactgaataggaaatgagtcgtcactttagtctctgaatgcagataaattgcaaagtagtccctgaatatagattatgtta 39541769  T
Q  192 gtcaatttagtcc 204  Q
    |||| ||| ||||    
T  39541770 gtcacttttgtcc 39541782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 92 - 206
Target Start/End: Original strand, 20758955 - 20759069
Alignment:
Q  92 ggagattagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgtta 191  Q
    |||||||| |||||||| || || |||| |||| |||||||||||||||||| ||||| ||||||||||| |||||| ||  ||||| |||||| | |||    
T  20758955 ggagattaatcactttaatctctgaatatgaaataagtcgtcactttagtccttgaatacagataaattgtaaaatagtctctgaatatagactctatta 20759054  T
Q  192 gtcaatttagtccct 206  Q
    |||||||||||||||    
T  20759055 gtcaatttagtccct 20759069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 96 - 199
Target Start/End: Original strand, 11989045 - 11989148
Alignment:
Q  96 attagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtca 195  Q
    |||||||||||| |||||| ||  ||||| |||| |||||||||||| ||||||||||| ||||||||||| | ||| ||||| |||||| |||| ||||    
T  11989045 attagtcacttttgtccctgaaagggaaagaagtagtcactttagtctctgaatgcagagaaattgcaaaacagtccctgaatatagactctgttggtca 11989144  T
Q  196 attt 199  Q
    ||||    
T  11989145 attt 11989148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 96 - 199
Target Start/End: Complemental strand, 15031499 - 15031396
Alignment:
Q  96 attagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtca 195  Q
    ||||||||||||||||||| ||| |||||  ||| |||||||||||| ||||||||||| ||||||||||| | ||| | ||| |||||| |||| ||||    
T  15031499 attagtcactttagtccctgaatgggaaatgagtagtcactttagtctctgaatgcagagaaattgcaaaacagtccctaaatctagactttgttggtca 15031400  T
Q  196 attt 199  Q
    ||||    
T  15031399 attt 15031396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 96 - 199
Target Start/End: Complemental strand, 20759206 - 20759103
Alignment:
Q  96 attagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtca 195  Q
    |||||||  |||||||||| |||  ||||  ||| |||| |||||||| |||||||||| ||||||||||||| ||| |||||||||||| |||||||||    
T  20759206 attagtcgttttagtccctgaatgagaaaggagtagtcattttagtccttgaatgcagagaaattgcaaaatagtccttgaatgtagactttgttagtca 20759107  T
Q  196 attt 199  Q
    ||||    
T  20759106 attt 20759103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 96 - 199
Target Start/End: Complemental strand, 38498382 - 38498279
Alignment:
Q  96 attagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtca 195  Q
    ||||||||||||| ||||| |||  ||||  ||| |||||||||||||||||||||| | ||||||||||||| ||  |||||||||||| ||||||| |    
T  38498382 attagtcactttaatccctgaatgagaaaggagtagtcactttagtccctgaatgcatagaaattgcaaaatagtctctgaatgtagactttgttagtta 38498283  T
Q  196 attt 199  Q
    ||||    
T  38498282 attt 38498279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 231 - 326
Target Start/End: Complemental strand, 41985049 - 41984954
Alignment:
Q  231 tagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtctacattcaaagactgttttgcaatttctctgcattca 326  Q
    |||||||||||| |||| || ||||||||| ||| ||| |||||||||| ||||  |||||| |||||  ||||||||||||||||||||||||||    
T  41985049 tagtccctgaatttagactcagttagtcacattaatccttgaaattgactaacagagtctacgttcaagcactgttttgcaatttctctgcattca 41984954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 95 - 199
Target Start/End: Original strand, 41984904 - 41985008
Alignment:
Q  95 gattagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtc 194  Q
    |||||||||||||||| ||| |||| ||||| ||| ||||||| ||| | |||||||||| ||||||||||| | | | |||| ||||||| ||||||||    
T  41984904 gattagtcactttagttcctgaataagaaaagagtagtcacttaagtacttgaatgcagagaaattgcaaaacagtgcttgaacgtagactctgttagtc 41985003  T
Q  195 aattt 199  Q
    |||||    
T  41985004 aattt 41985008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 96 - 199
Target Start/End: Complemental strand, 21515023 - 21514920
Alignment:
Q  96 attagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtca 195  Q
    |||||||||||| |||||| ||| |||||  ||| |||| |||||||| |||||| ||||||||| ||||| | ||| |||||||||||||| || ||||    
T  21515023 attagtcacttttgtccctgaattggaaatgagtagtcattttagtccttgaatgtagataaatttcaaaacagtccctgaatgtagactatattggtca 21514924  T
Q  196 attt 199  Q
    ||||    
T  21514923 attt 21514920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 143 - 326
Target Start/End: Original strand, 26840038 - 26840219
Alignment:
Q  143 cctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtcaatttagtccctaactgcatactctattagttactttagtccctgaat 242  Q
    |||||||| ||||||||| ||||||| ||  |||||||||||| |   |||||||||||||  ||| || | ||||  ||||||| |||||||| |||||    
T  26840038 cctgaatgtagataaattacaaaatagtctttgaatgtagactct---agtcaatttagtctttaattgaagactccgttagttaatttagtccttgaat 26840134  T
Q  243 gtagaatccgttagtcactttagtccctgaaattgacc-aacatcgtctacattcaaagactgttttgcaatttctctgcattca 326  Q
     || | || ||||||||||||| ||| || |||| ||| ||||  ||||| |||||  || || |||||||||||||||||||||    
T  26840135 ataaactctgttagtcactttaatccatggaattaaccaaacagagtctatattcagggattgctttgcaatttctctgcattca 26840219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 93 - 242
Target Start/End: Complemental strand, 7300300 - 7300152
Alignment:
Q  93 gagattagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttag 192  Q
    ||||||||| ||||||||| || |||||||||  |||||| | ||||||||  || |||| ||||||| ||||||| | |   | |||||| | ||||||    
T  7300300 gagattagttactttagtctctgaataggaaaggagtcgttattttagtcctcga-tgcacataaattacaaaatagtacgaaattgtagattctgttag 7300202  T
Q  193 tcaatttagtccctaactgcatactctattagttactttagtccctgaat 242  Q
    |||||||| ||||||| |||| ||||| ||||| |||||||||| |||||    
T  7300201 tcaatttaatccctaaatgcagactctgttagtcactttagtccttgaat 7300152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 95 - 199
Target Start/End: Original strand, 18445404 - 18445508
Alignment:
Q  95 gattagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtc 194  Q
    |||||||||||||||| ||| |||  ||||| ||| ||||||| ||| | |||||||||| ||||||||||| | | | |||| ||||||| ||||||||    
T  18445404 gattagtcactttagttcctgaatcagaaaagagtagtcacttaagtacttgaatgcagagaaattgcaaaacagtgcttgaacgtagactctgttagtc 18445503  T
Q  195 aattt 199  Q
    |||||    
T  18445504 aattt 18445508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 131 - 199
Target Start/End: Complemental strand, 48755572 - 48755504
Alignment:
Q  131 gtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtcaattt 199  Q
    |||||||||||||||||||||||| ||||||||||| | | | |||||||||||| |||| ||||||||    
T  48755572 gtcactttagtccctgaatgcagagaaattgcaaaacagttcctgaatgtagactctgttggtcaattt 48755504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 116 - 199
Target Start/End: Complemental strand, 39541869 - 39541786
Alignment:
Q  116 aataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtcaattt 199  Q
    ||||| ||| |||| |||||||||||||||||||||||| |||||| |||| | ||  |||||||||||| |||| ||||||||    
T  39541869 aatagaaaagaagtagtcactttagtccctgaatgcagagaaattgtaaaacagtctctgaatgtagactctgttggtcaattt 39541786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 92 - 180
Target Start/End: Original strand, 33412200 - 33412288
Alignment:
Q  92 ggagattagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgt 180  Q
    ||||||||||||||||||||  | |||||||||  | ||||||||||| ||   |||||||||||||||| |||||| ||| |||||||    
T  33412200 ggagattagtcactttagtctttgaataggaaatgaatcgtcactttaatcttcgaatgcagataaattgtaaaatagtccttgaatgt 33412288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 97 - 199
Target Start/End: Original strand, 14434641 - 14434743
Alignment:
Q  97 ttagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtcaa 196  Q
    |||||||||||| ||| | ||| |||||  | | ||||||||||||| | |||||||| | ||||||||| | ||| |||||||||||| ||||||| ||    
T  14434641 ttagtcactttaatccatgaatgggaaatgaatagtcactttagtccgtaaatgcagagatattgcaaaacagtccttgaatgtagactttgttagttaa 14434740  T
Q  197 ttt 199  Q
    |||    
T  14434741 ttt 14434743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 187 - 284
Target Start/End: Original strand, 36383089 - 36383186
Alignment:
Q  187 tgttagtcaatttagtccctaactgcatactctattagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaaca 284  Q
    |||||||||||||| ||| | | |||| ||| | || || | ||||||| |||||| |||| | |||||||||||||||||||| |||||||| ||||    
T  36383089 tgttagtcaatttaatccttgaatgcagactttgttggtcaatttagtctctgaatatagacttcgttagtcactttagtccctaaaattgactaaca 36383186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 199
Target Start/End: Complemental strand, 1426719 - 1426651
Alignment:
Q  131 gtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtcaattt 199  Q
    |||| |||| |||||||||||||| ||||||||||| | ||  |||||||||||| |||| ||||||||    
T  1426719 gtcattttaatccctgaatgcagagaaattgcaaaacagtcactgaatgtagactttgttggtcaattt 1426651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 199
Target Start/End: Complemental strand, 44968098 - 44968031
Alignment:
Q  131 gtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtcaattt 199  Q
    ||||||||||||| |||||| ||||||||||||||| | ||| | |||||||||| |||| ||||||||    
T  44968098 gtcactttagtcc-tgaatgtagataaattgcaaaacagtccctaaatgtagactttgttggtcaattt 44968031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 340
Target Start/End: Complemental strand, 48755430 - 48755362
Alignment:
Q  272 aaattgaccaacatcgtctacattcaaagactgttttgcaatttctctgcattcagagattaaagtgac 340  Q
    |||||||| ||||  |||||||||||  |||| |||||||| || |||||||||||||| |||||||||    
T  48755430 aaattgactaacagagtctacattcagggactattttgcaacttatctgcattcagagactaaagtgac 48755362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 273 - 373
Target Start/End: Complemental strand, 33343108 - 33343006
Alignment:
Q  273 aattgaccaacatcgtctacattcaaagactgttttgcaatttctctgcattcagagattaaagtgactact--ttttccattaagggattaaagtgaat 370  Q
    ||||||| ||||| |||||||||||  |||  ||| ||||||| ||||||||||| || ||||||||| |||  ||||| ||| ||||| |||||||| |    
T  33343108 aattgactaacatagtctacattcagggaccatttagcaatttatctgcattcagggactaaagtgacgactcattttctattcagggactaaagtgact 33343009  T
Q  371 aat 373  Q
    |||    
T  33343008 aat 33343006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 96 - 199
Target Start/End: Complemental strand, 33343283 - 33343180
Alignment:
Q  96 attagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtca 195  Q
    ||||||||||||| ||||| ||| |||||  ||| | || ||||||  ||||||||||| ||||||||||| | ||| ||||| || ||| |||| ||||    
T  33343283 attagtcactttaatccctgaatgggaaatgagtagacattttagttactgaatgcagagaaattgcaaaacagtccttgaatataaactctgttggtca 33343184  T
Q  196 attt 199  Q
    ||||    
T  33343183 attt 33343180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 272 - 368
Target Start/End: Complemental strand, 44967958 - 44967860
Alignment:
Q  272 aaattgaccaacatcgtctacattcaaagactgttttgcaatttctctgcattcagagattaaagtgactact--ttttccattaagggattaaagtga 368  Q
    |||||||| ||||  ||||||||||||| ||| ||||||||| | | ||||||||| || ||||||||| |||  ||||| ||||| ||| ||||||||    
T  44967958 aaattgactaacagagtctacattcaaaaactattttgcaatatatttgcattcagggactaaagtgacaactcattttctattaaaggactaaagtga 44967860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 131 - 199
Target Start/End: Complemental strand, 15005202 - 15005134
Alignment:
Q  131 gtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtcaattt 199  Q
    |||||||||||| ||||||||||| ||||||||||| | |   |||||||||||| |||  ||||||||    
T  15005202 gtcactttagtctctgaatgcagagaaattgcaaaacagtttctgaatgtagactctgtcggtcaattt 15005134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 287 - 339
Target Start/End: Original strand, 26498707 - 26498759
Alignment:
Q  287 gtctacattcaaagactgttttgcaatttctctgcattcagagattaaagtga 339  Q
    |||||||||||  |||| ||||||||||| ||||||||||| || ||||||||    
T  26498707 gtctacattcatggactattttgcaatttatctgcattcagggactaaagtga 26498759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 373
Target Start/End: Complemental strand, 42453146 - 42453043
Alignment:
Q  272 aaattgaccaacatcgtctacattcaaagactgttttgcaatttctctgcattcagagattaaagtgactact--ttttccattaagggattaaagtgaa 369  Q
    |||||||| ||||  ||||||||| |  |||| ||||||||||| | |||||||| ||| ||||||||| |||  ||||| ||| | ||||||||||||     
T  42453146 aaattgactaacagagtctacatttagggactattttgcaatttatttgcattcatagactaaagtgacgactcattttctattcaaggattaaagtgac 42453047  T
Q  370 taat 373  Q
    ||||    
T  42453046 taat 42453043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 126; Significance: 8e-65; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 87 - 344
Target Start/End: Complemental strand, 30471106 - 30470849
Alignment:
Q  87 taaaaggagattagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagacta 186  Q
    ||||||||||||||||||||||||| || ||||| |||| ||||||||||||||| |||||||| |||||||||| |||||| ||| |||||||||||||    
T  30471106 taaaaggagattagtcactttagtctctgaatagaaaaagagtcgtcactttagttcctgaatgtagataaattgtaaaatagtccctgaatgtagacta 30471007  T
Q  187 tgttagtcaatttagtccctaactgcatactctattagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatc 286  Q
    ||||| |||||||||||||| | |||| ||||  ||| | | |||||||  |||||||||| || |||||||||||||||||||||||||||||||||      
T  30471006 tgttaatcaatttagtccctgaatgcagactccgttaatcaatttagtcattgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaa 30470907  T
Q  287 gtctacattcaaagactgttttgcaatttctctgcattcagagattaaagtgactact 344  Q
      ||||||| |  || |||||||||||||||||||||||||  | |||||||||||||    
T  30470906 tgctacatttagggagtgttttgcaatttctctgcattcaggaactaaagtgactact 30470849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 92 - 374
Target Start/End: Complemental strand, 18830853 - 18830574
Alignment:
Q  92 ggagattagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgtta 191  Q
    |||||||||||||||||||| |||    ||||| || |||||||||||||||||||||||||||||||||||||||| ||| |||||||||| | |||||    
T  18830853 ggagattagtcactttagtctcta----ggaaagaaatcgtcactttagtccctgaatgcagataaattgcaaaatagtccttgaatgtagattctgtta 18830758  T
Q  192 gtcaatttagtccctaactgcatactctattagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtcta 291  Q
    ||| ||||||||||| | |||| |||   ||||| | ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||   ||||    
T  18830757 gtccatttagtccctgaatgcagacttcgttagtcaatttagtccctgaatgtagactccattagtcactttagtccctgaaattgaccaacagaatcta 18830658  T
Q  292 cattcaaagactgttttgcaatttctctgcattcagagattaaagtgactact--ttttccattaagggattaaagtgaataatt 374  Q
    ||||||  |||||||| ||||||| ||||||| ||| || |||||||||||||  |||  |||| ||||| |||||||| |||||    
T  18830657 cattcagggactgtttagcaatttatctgcatccag-gactaaagtgactactcatttctcattcagggactaaagtgactaatt 18830574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 92 - 375
Target Start/End: Complemental strand, 2634307 - 2634022
Alignment:
Q  92 ggagattagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgtta 191  Q
    ||||||||||||||||||||| |||||| ||||  |||| ||||||||||| ||||||| ||||||||||| ||||| ||  |||||||||||| |||||    
T  2634307 ggagattagtcactttagtccttaaataagaaatgagtcttcactttagtcactgaatgtagataaattgctaaatagtctctgaatgtagactctgtta 2634208  T
Q  192 gtcaatttagtccctaactgcatactctattagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtcta 291  Q
    ||||||||||||||| | |||| ||||| || || | ||||||||||||||||||| |  |||| ||||||||||| |||||||||||||| |  |||||    
T  2634207 gtcaatttagtccctgaatgcagactctgttcgtcaatttagtccctgaatgtagactttgttaatcactttagtcgctgaaattgaccaataaagtcta 2634108  T
Q  292 cattcaaagactgttttgcaatttctctgcattcagagattaaagtgactact-ttttc-cattaagggattaaagtgaataattc 375  Q
    ||||||  ||||||||||||||||||| |||||| | |  ||||||||||||| ||||| |||| | ||| |||||||| ||||||    
T  2634107 cattcagggactgttttgcaatttctcagcattcggcggctaaagtgactactcttttctcattcatggactaaagtgactaattc 2634022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 95 - 375
Target Start/End: Original strand, 5448195 - 5448477
Alignment:
Q  95 gattagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtc 194  Q
    |||||||| ||||| ||||| |||||||||  |||| ||| |||||||||||||||||||||||||| ||||||  || |||||||| ||| ||||||||    
T  5448195 gattagtccctttattccctgaataggaaaggagtcatcattttagtccctgaatgcagataaattgtaaaatagcccctgaatgtaaactctgttagtc 5448294  T
Q  195 aatttagtccctaactgcatactctattagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtctacat 294  Q
    ||||||||||||   |||| ||||  || || | |||||||||||||| |||| | | |||||||||||||| |||||||||||||||||  || |||||    
T  5448295 aatttagtccctggatgcagactccgttggtcaatttagtccctgaatatagacttcattagtcactttagttcctgaaattgaccaacagagtttacat 5448394  T
Q  295 tcaaagactgttttgcaatttctctgcattcagagattaaagtgacta--ctttttccattaagggattaaagtgaataattc 375  Q
    |||  |||||||||||||||||||||||||||| || |||||||||||  ||||||| ||| | ||| |||||||| ||||||    
T  5448395 tcagggactgttttgcaatttctctgcattcagggactaaagtgactattctttttcgattcacggagtaaagtgactaattc 5448477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 92 - 342
Target Start/End: Complemental strand, 10380878 - 10380633
Alignment:
Q  92 ggagattagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgtta 191  Q
    ||||||||||||||||||||| | ||||| ||| ||||||| ||||||| |||||||| |||||||||||||||||| ||  | |||||||||| |||||    
T  10380878 ggagattagtcactttagtccttgaatagaaaataagtcgtaactttagcccctgaattcagataaattgcaaaatagtctctaaatgtagactctgtta 10380779  T
Q  192 gtcaatttagtccctaactgcatactctattagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtcta 291  Q
    ||||||||| ||||| | |||| |||   ||||| | |||||||||| |||||||| || |||||||||||||||||||||||||||||||||  || ||    
T  10380778 gtcaatttaatccctgaatgcagacttcgttagtcaatttagtccctaaatgtagactcagttagtcactttagtccctgaaattgaccaacaaagttta 10380679  T
Q  292 cattcaaagactgttttgcaatttctctgcattcagagattaaagtgacta 342  Q
    |||     ||||||||||||||||||||||||||||| | |||||||||||    
T  10380678 cat-----gactgttttgcaatttctctgcattcagaaactaaagtgacta 10380633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 94 - 375
Target Start/End: Original strand, 2063144 - 2063427
Alignment:
Q  94 agattagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagt 193  Q
    ||||||||||||||||||||| || ||||||  ||||| |||||| || | ||||||||||||||||  |||||| ||  |||||||| |||||||||||    
T  2063144 agattagtcactttagtccctgaagaggaaatgagtcggcactttggttcttgaatgcagataaattataaaatagtcattgaatgtaaactatgttagt 2063243  T
Q  194 caatttagtccctaactgcatactctattagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtctaca 293  Q
    |||||||||| || | |||| ||||  ||||| | |||||||||| ||||||||||  ||||||||||||||||  | |||||||||||||  |||||||    
T  2063244 caatttagtctctgaatgcaaactccgttagtcaatttagtccctaaatgtagaatttgttagtcactttagtctttaaaattgaccaacagagtctaca 2063343  T
Q  294 ttcaaagactgttttgcaatttctctgcattcagagattaaagtgactact--ttttccattaagggattaaagtgaataattc 375  Q
    ||||  ||||| ||||||||||||||||| |||  ||||||||||||||||  ||| ||||| | ||| |||||||| ||||||    
T  2063344 ttcagggactgctttgcaatttctctgcaatcaaggattaaagtgactactcatttcccattcaaggactaaagtgactaattc 2063427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 109 - 337
Target Start/End: Original strand, 11821736 - 11821968
Alignment:
Q  109 gtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtcaatttagtccctaa 208  Q
    |||||||||||||||| |||||||||||||||||| | ||| |||||||||||||||||| ||  |||||||||||| ||||||| |||||||||||| |    
T  11821736 gtccctaaataggaaagaagtcgtcactttagtccttaaatacagataaattgcaaaatagtctttgaatgtagactctgttagttaatttagtccctga 11821835  T
Q  209 ctgcatactctattagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtctacattcaaa----gactg 304  Q
     |||| | |   ||||| | |||||||  |||||||||| || |||||||||||||||||||||||||||||||||  ||||| ||||| |    || ||    
T  11821836 atgcagatttcgttagtcaatttagtctatgaatgtagactctgttagtcactttagtccctgaaattgaccaacaaagtctaaattcagagattgattg 11821935  T
Q  305 ttttgcaatttctctgcattcagagattaaagt 337  Q
    ||||||||||||||||||||||| || ||||||    
T  11821936 ttttgcaatttctctgcattcagggactaaagt 11821968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 93 - 267
Target Start/End: Complemental strand, 55382838 - 55382664
Alignment:
Q  93 gagattagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttag 192  Q
    |||||||||||||||||||| | |||||||||  ||||||||||||| |||||||||||||||||||||||||||| ||  |||||||||||| ||||||    
T  55382838 gagattagtcactttagtccttgaataggaaatgagtcgtcactttaatccctgaatgcagataaattgcaaaatagtctctgaatgtagactttgttag 55382739  T
Q  193 tcaatttagtccctaactgcatactctattagttactttagtccctgaatgtagaatccgttagtcactttagtc 267  Q
    ||||||| |||||||| |||| | ||  ||||| | ||||||||||| ||||||| |||||||||||||||||||    
T  55382738 tcaattttgtccctaaatgcagattccgttagtcaatttagtccctggatgtagactccgttagtcactttagtc 55382664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 131 - 344
Target Start/End: Complemental strand, 18836523 - 18836311
Alignment:
Q  131 gtcactttagtccctgaatgcagataaattgcaaaa-taatccatgaatgtagactatgttagtcaatttagtccctaactgcatactctattagttact 229  Q
    |||||||||||||||||||||||| ||||||||||| |||||| |||| ||||||| |||||||| ||||||||||| | |||| ||||  ||||| | |    
T  18836523 gtcactttagtccctgaatgcagaaaaattgcaaaagtaatccctgaacgtagactctgttagtccatttagtccctgaatgcagactccgttagtca-t 18836425  T
Q  230 ttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtctacattcaaagactgttttgcaatttctctgcattcagag 329  Q
    |||||||||||||||||| ||| |||||||||||||||| | ||||||||||||| |||  ||||| |  |||||||||| ||||| ||||||||||| |    
T  18836424 ttagtccctgaatgtagactccattagtcactttagtccataaaattgaccaacagcgttaacatttagggactgttttg-aatttatctgcattcaggg 18836326  T
Q  330 attaaagtgactact 344  Q
    | |||||||||||||    
T  18836325 actaaagtgactact 18836311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 92 - 344
Target Start/End: Original strand, 30378739 - 30378986
Alignment:
Q  92 ggagattagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgtta 191  Q
    |||||||| ||||||| |||| | | |||||||| |||| ||||||||||||||| ||| | ||||||||||||||| ||  |||||| ||||| |||||    
T  30378739 ggagattaatcactttggtcc-tgattaggaaaagagtcatcactttagtccctggatgtaaataaattgcaaaatagtctctgaatgcagactctgtta 30378837  T
Q  192 gtcaatttagtccctaactgcatactctattagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtcta 291  Q
    ||||||| |||| || | |||| ||||| ||||| | || ||||||||||| |||| ||||||||||||||||||  ||||||||||||||    ||||     
T  30378838 gtcaattcagtctctgaatgcagactctgttagtcaattcagtccctgaat-tagactccgttagtcactttagtgtctgaaattgaccaa---agtctg 30378933  T
Q  292 cattcaaagactgttttgcaatttctctgcattcagagattaaagtgactact 344  Q
    |||||| |||||  ||||||||||||||||||| || || |||||||||||||    
T  30378934 cattcagagacttctttgcaatttctctgcattaagggactaaagtgactact 30378986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 127 - 344
Target Start/End: Complemental strand, 5324927 - 5324714
Alignment:
Q  127 agtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtcaatttagtccctaactgcatactctattagtt 226  Q
    |||||||||||||||||  ||||    |||||||| |||||| |   ||| || ||||| |||||||||||||||| | | | |||| ||||| |||||     
T  5324927 agtcgtcactttagtcctcgaat----ataaattgtaaaatagtttctgattgcagactctgttagtcaatttagttcatgaatgcagactctgttagtc 5324832  T
Q  227 actttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtctacattcaaagactgttttgcaatttctctgcattca 326  Q
    | |||||||| |||||||| | || ||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| ||    
T  5324831 aatttagtccttgaatgtaaactctgttcgtcactttagtccctgaaattgaccaacagagtctacattcaaagactgttttgcaatttctctgcatcca 5324732  T
Q  327 gagattaaagtgactact 344  Q
    |||  ||||| |||||||    
T  5324731 gaggctaaagcgactact 5324714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 92 - 320
Target Start/End: Complemental strand, 47943731 - 47943503
Alignment:
Q  92 ggagattagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgtta 191  Q
    |||||||||||  |||||||||| |||||||||  ||||||||||||||||| | |||||||||||||||||||||| ||| ||||||||||||  ||||    
T  47943731 ggagattagtcgttttagtccctgaataggaaatgagtcgtcactttagtccttaaatgcagataaattgcaaaatagtccctgaatgtagacttggtta 47943632  T
Q  192 gtcaatttagtccctaactgcatactctattagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtcta 291  Q
    ||||||||||| | | | ||||    |  ||||| | |||| |||||||||||||| |  |||| ||||| |||||||| |||||||||||||   ||||    
T  47943631 gtcaatttagttcttgaatgcaggaaccgttagtcaatttaatccctgaatgtagactatgttaatcactatagtccctaaaattgaccaacaaaatcta 47943532  T
Q  292 cattcaaagactgttttgcaatttctctg 320  Q
    ||||||| |||| ||||| ||||||||||    
T  47943531 cattcaatgactattttgtaatttctctg 47943503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 96 - 326
Target Start/End: Original strand, 9826632 - 9826862
Alignment:
Q  96 attagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtca 195  Q
    |||||||||||| |||||| ||||||||| || |  |||||||||||| |||||||||||||||||||||||| |   |||||||| |||||||||||||    
T  9826632 attagtcactttggtccctgaataggaaagaaattatcactttagtccatgaatgcagataaattgcaaaatagtttctgaatgtatactatgttagtca 9826731  T
Q  196 atttagtccctaactgcatactctattagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtctacatt 295  Q
    | |||||  || | |||| |||   ||| | | |||| ||||||||| |||| || ||||||||| ||| ||| |||||||||| ||||  |||||| ||    
T  9826732 acttagtatctgaatgcagacttcgttaatcaatttaatccctgaatttagactcagttagtcacattaatccttgaaattgactaacagagtctacgtt 9826831  T
Q  296 caaagactgttttgcaatttctctgcattca 326  Q
    |||  ||||||||||||||||||||||||||    
T  9826832 caagcactgttttgcaatttctctgcattca 9826862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 92 - 241
Target Start/End: Complemental strand, 22018133 - 22017984
Alignment:
Q  92 ggagattagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgtta 191  Q
    |||||||||||||||||||||||||||||||||  |||||||| ||| ||| ||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  22018133 ggagattagtcactttagtccctaaataggaaatgagtcgtcattttcgtctctgaatgcagataaattgcaaaatagtccctgaatgtagactatgtta 22018034  T
Q  192 gtcaatttagtccctaactgcatactctattagttactttagtccctgaa 241  Q
    ||| |||||||| || | || ||||||  ||| | |||||||||| ||||    
T  22018033 gtctatttagtctctgaatgtatactccgttaatcactttagtccttgaa 22017984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 87 - 273
Target Start/End: Complemental strand, 1387631 - 1387444
Alignment:
Q  87 taaaaggagattagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagacta 186  Q
    ||||||||||||||| |||||||||||| ||||||||| || || ||| ||||| |||||||||||||||||||| |||||| ||| |||||||||| |     
T  1387631 taaaaggagattagttactttagtccctgaataggaaagaaatcatcattttaggccctgaatgcagataaattgtaaaatattccctgaatgtagattt 1387532  T
Q  187 tgttagtcaatttagt-ccctaactgcatactctattagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaa 273  Q
    ||||  |||||||||| |||| | |||| ||||| ||||| | ||||||| ||||||||||| |  ||||||||||||||| ||||||    
T  1387531 tgttcatcaatttagtcccctgaatgcagactctgttagtcaatttagtcgctgaatgtagactttgttagtcactttagttcctgaa 1387444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 174 - 344
Target Start/End: Complemental strand, 37695101 - 37694931
Alignment:
Q  174 tgaatgtagactatgttagtcaatttagtccctaactgcatactctattagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaa 273  Q
    |||||| ||||| |||||||||||||| ||||||| |||| || |  ||||| | |||||||||||||| |||| ||  ||||||||||||||| || ||    
T  37695101 tgaatgcagactctgttagtcaatttaatccctaaatgcagaccccgttagtcaatttagtccctgaatatagactctattagtcactttagtcacttaa 37695002  T
Q  274 attgaccaacatcgtctacattcaaagactgttttgcaatttctctgcattcagagattaaagtgactact 344  Q
    |||||||||||   ||||||||||  |||||||||||||||||||||||||||| || |||||||||||||    
T  37695001 attgaccaacacaatctacattcagggactgttttgcaatttctctgcattcagggactaaagtgactact 37694931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 129 - 375
Target Start/End: Complemental strand, 2232616 - 2232370
Alignment:
Q  129 tcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtcaatttagtccctaactgcatactctattagttac 228  Q
    ||||||||||||||||| |||| | |||||||| |||||| ||| | ||||||||||||||||||||||||| |||||   || | ||||| ||||  |     
T  2232616 tcgtcactttagtccctaaatgtaaataaattgtaaaatagtccttcaatgtagactatgttagtcaatttaatccctggttg-agactctgttagccaa 2232518  T
Q  229 tttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtctacattcaaagactgttttgcaatttctctgcattcaga 328  Q
    ||||||||||||||||||| |   ||| ||||||||||||||||||||||||||||   |||||||| |  || |||||||||||||||||  ||||||     
T  2232517 tttagtccctgaatgtagacttt-ttaatcactttagtccctgaaattgaccaacagaatctacattgagggattgttttgcaatttctctctattcagg 2232419  T
Q  329 gattaaagtgactact--ttttccattaagggattaaagtgaataattc 375  Q
    || |||| ||||||||  |||| |||| ||| | |||||||| ||||||    
T  2232418 gactaaattgactactcatttttcatttaggaactaaagtgactaattc 2232370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 93 - 322
Target Start/End: Original strand, 18500596 - 18500824
Alignment:
Q  93 gagattagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttag 192  Q
    |||||||||||||||| | ||| ||||||||| | ||||||| ||||||| | |||| || ||| |||| ||||||||   | |||||| ||||| ||||    
T  18500596 gagattagtcactttattgcctcaataggaaaga-gtcgtcattttagtctcagaatacaaatagattgaaaaataatttttaaatgtaaactatattag 18500694  T
Q  193 tcaatttagtccctaactgcatactctattagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtctac 292  Q
     ||||||| ||||| | || | ||||| ||||| | |||||||||||||| |||| || |||| ||||||||||| ||||||||||||||||   |||||    
T  18500695 ccaatttaatccctgaatgtagactctgttagtcaatttagtccctgaatttagactctgttaatcactttagtctctgaaattgaccaacagtatctac 18500794  T
Q  293 attcaaagactgttttgcaatttctctgca 322  Q
    ||||||  |||||||| |||||||||||||    
T  18500795 attcaagaactgttttacaatttctctgca 18500824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 94 - 273
Target Start/End: Complemental strand, 37695213 - 37695034
Alignment:
Q  94 agattagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagt 193  Q
    ||||| ||||||||||| | | || ||||||  |||| |||||||||||| |||||||||||||||||||||||||||  |||||||||||| |||||||    
T  37695213 agattggtcactttagttcatgaaaaggaaatgagtcatcactttagtccttgaatgcagataaattgcaaaataatctctgaatgtagactctgttagt 37695114  T
Q  194 caatttagtccctaactgcatactctattagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaa 273  Q
    ||||||| ||  | | |||| ||||| ||||| | |||| ||||| |||| |||  |||||||||| |||||||||||||    
T  37695113 caatttaatcgttgaatgcagactctgttagtcaatttaatccctaaatgcagaccccgttagtcaatttagtccctgaa 37695034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 180 - 375
Target Start/End: Complemental strand, 10757765 - 10757568
Alignment:
Q  180 tagactatgttagtcaatttagtccctaactgcatactctattagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgac 279  Q
    |||||| ||||||  |||||||||||| | |||| ||||  ||||| | ||||||||||||||||||| || |||| ||||| || ||||||| ||||||    
T  10757765 tagactctgttagcgaatttagtccctgaatgcagactccgttagtcaatttagtccctgaatgtagactctgttaatcactataatccctgagattgac 10757666  T
Q  280 caacatcgtctacattcaaagactgttttgcaatttctctgcattcagagattaaagtgactact--ttttccattaagggattaaagtgaataattc 375  Q
    |||||| |||||||| ||  |||||||||||||||| ||| ||||||| || |||||||||||||  |||  |||| ||||| |||||||| ||||||    
T  10757665 caacatagtctacatccatggactgttttgcaatttatctacattcagggactaaagtgactactcatttctcattcagggactaaagtgactaattc 10757568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 180 - 375
Target Start/End: Complemental strand, 10970936 - 10970739
Alignment:
Q  180 tagactatgttagtcaatttagtccctaactgcatactctattagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgac 279  Q
    |||||| ||||||  |||||||||||| | |||| ||||  ||||| | ||||||||||||||||||| || |||| ||||| || ||||||| ||||||    
T  10970936 tagactctgttagcgaatttagtccctgaatgcagactccgttagtcaatttagtccctgaatgtagactctgttaatcactataatccctgagattgac 10970837  T
Q  280 caacatcgtctacattcaaagactgttttgcaatttctctgcattcagagattaaagtgactact--ttttccattaagggattaaagtgaataattc 375  Q
    |||||| |||||||| ||  |||||||||||||||| ||| ||||||| || |||||||||||||  |||  |||| ||||| |||||||| ||||||    
T  10970836 caacatagtctacatccatggactgttttgcaatttatctacattcagggactaaagtgactactcatttctcattcagggactaaagtgactaattc 10970739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 229 - 368
Target Start/End: Complemental strand, 22018028 - 22017887
Alignment:
Q  229 tttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtctacattcaaagactgttttgcaatttctctgcattcaga 328  Q
    ||||||| ||||||||| | ||||||| |||||||||||| |||||||||||||||   | ||||||||  ||||||||||||||||||||||||||||     
T  22018028 tttagtctctgaatgtatactccgttaatcactttagtccttgaaattgaccaacagaatatacattcagggactgttttgcaatttctctgcattcagg 22017929  T
Q  329 gattaaagtgactact--ttttccattaagggattaaagtga 368  Q
    || |||||||||||||  ||| ||||| ||||||||||||||    
T  22017928 gactaaagtgactactcctttcccattcagggattaaagtga 22017887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 259 - 348
Target Start/End: Original strand, 3391170 - 3391259
Alignment:
Q  259 actttagtccctgaaattgaccaacatcgtctacattcaaagactgttttgcaatttctctgcattcagagattaaagtgactacttttt 348  Q
    |||||||||| |||||||||| ||||  |||||||||||| || |||||||||||||||||||||||||||| |||||||||||||||||    
T  3391170 actttagtccttgaaattgactaacaaagtctacattcaatgattgttttgcaatttctctgcattcagagactaaagtgactacttttt 3391259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 256 - 374
Target Start/End: Complemental strand, 47463933 - 47463813
Alignment:
Q  256 gtcactttagtccctgaaattgaccaacatcgtctacattcaaagactgttttgcaatttctctgcattcagagattaaagtgactact--ttttccatt 353  Q
    ||||||||||||||||||||| | |||||  ||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||  ||| ||||     
T  47463933 gtcactttagtccctgaaatttatcaacagagtctacattcaaagactgttttgcaatttatctgcattcagggactaaagtgactactcatttcccatc 47463834  T
Q  354 aagggattaaagtgaataatt 374  Q
     ||||| |||||||| |||||    
T  47463833 cagggactaaagtgactaatt 47463813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 96 - 197
Target Start/End: Original strand, 10757570 - 10757671
Alignment:
Q  96 attagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtca 195  Q
    ||||||||||||||||||| |||  ||||  ||| |||||||||||||||||||| ||||||||||||||| | |||||| |||||||||||||| ||||    
T  10757570 attagtcactttagtccctgaatgagaaatgagtagtcactttagtccctgaatgtagataaattgcaaaacagtccatggatgtagactatgttggtca 10757669  T
Q  196 at 197  Q
    ||    
T  10757670 at 10757671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 96 - 197
Target Start/End: Original strand, 10970741 - 10970842
Alignment:
Q  96 attagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtca 195  Q
    ||||||||||||||||||| |||  ||||  ||| |||||||||||||||||||| ||||||||||||||| | |||||| |||||||||||||| ||||    
T  10970741 attagtcactttagtccctgaatgagaaatgagtagtcactttagtccctgaatgtagataaattgcaaaacagtccatggatgtagactatgttggtca 10970840  T
Q  196 at 197  Q
    ||    
T  10970841 at 10970842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 94 - 203
Target Start/End: Original strand, 29908887 - 29908996
Alignment:
Q  94 agattagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagt 193  Q
    ||||||||||||||  ||| | |||||||||  |||||||||||||||| ||| ||||||||||||||||||||| | |||||||| |||||  ||||||    
T  29908887 agattagtcactttgatccttgaataggaaatgagtcgtcactttagtcactggatgcagataaattgcaaaatagttcatgaatgcagactccgttagt 29908986  T
Q  194 caatttagtc 203  Q
    ||||||||||    
T  29908987 caatttagtc 29908996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 96 - 263
Target Start/End: Original strand, 3369965 - 3370132
Alignment:
Q  96 attagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtca 195  Q
    |||||||| |||||| ||| |  |||||| |||| |||| |||||| ||||||| |||||||||||||||||| ||  | |||||||||| |||||||||    
T  3369965 attagtcattttagttcctgagcaggaaagaagttgtcattttagttcctgaatccagataaattgcaaaatagtcattaaatgtagactctgttagtca 3370064  T
Q  196 atttagtccctaactgcatactctattagttactttagtccctgaatgtagaatccgttagtcacttt 263  Q
    ||||||||||| | |||| |||   ||||| | ||||||| || |||||||| ||  |||||||||||    
T  3370065 atttagtccctgaatgcagacttcgttagtcaatttagtctcttaatgtagactctattagtcacttt 3370132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 229 - 375
Target Start/End: Complemental strand, 12140813 - 12140665
Alignment:
Q  229 tttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtctacattcaaagactgttttgcaatttctctgcattcaga 328  Q
    |||||||| ||||||||||||  |||||||| |||||||||| |||||||  ||||  ||||| ||| |  |||||||||||||||||| ||||||||      
T  12140813 tttagtccttgaatgtagaatttgttagtcattttagtccctaaaattgattaacaaagtctatatttagggactgttttgcaatttctttgcattcaag 12140714  T
Q  329 gattaaagtgactactt-tttc-cattaagggattaaagtgaataattc 375  Q
    |||||||||||| |||| |||| |||| | |||||||||||| ||||||    
T  12140713 gattaaagtgacgacttatttctcatttaaggattaaagtgactaattc 12140665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 174 - 344
Target Start/End: Complemental strand, 1387479 - 1387310
Alignment:
Q  174 tgaatgtagactatgttagtcaatttagtccctaactgcatactctattagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaa 273  Q
    |||||||||||| ||||||||| |||||| ||| | |||| || |  ||||| | |||||| || ||||||||| | |||||||||||||||||||| |     
T  1387479 tgaatgtagactttgttagtcactttagttcctgaatgcaaaccccgttagtcaatttagttccggaatgtagacttcgttagtcactttagtccctaat 1387380  T
Q  274 attgaccaacatcgtctacattcaaagactgttttgcaatttctctgcattcagagattaaagtgactact 344  Q
    |||||| ||||   | ||||||||| ||||| |||| ||||||||||||||||  || |||| ||||||||    
T  1387379 attgactaaca-aatatacattcaaggactgctttgtaatttctctgcattcatggactaaaatgactact 1387310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 96 - 190
Target Start/End: Original strand, 47463814 - 47463908
Alignment:
Q  96 attagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgtt 190  Q
    |||||||||||||||||||  || |||||  ||| |||||||||||||||||||||||||||||||||||| | ||  |||||||||||| ||||    
T  47463814 attagtcactttagtccctggatgggaaatgagtagtcactttagtccctgaatgcagataaattgcaaaacagtctttgaatgtagactctgtt 47463908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 122 - 199
Target Start/End: Complemental strand, 3391260 - 3391183
Alignment:
Q  122 aaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtcaattt 199  Q
    |||||||| |||||||||||| ||||||||||| ||||||||||| ||||  |||||||||||| |||||||||||||    
T  3391260 aaaaaagtagtcactttagtctctgaatgcagagaaattgcaaaacaatcattgaatgtagactttgttagtcaattt 3391183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 229 - 337
Target Start/End: Complemental strand, 8951166 - 8951058
Alignment:
Q  229 tttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtctacattcaaagactgttttgcaatttctctgcattcaga 328  Q
    |||||| ||| |||||||| | ||||||||| ||||||  || ||||||||||||   ||||||||||||||||||||||||||||||| | |||||||     
T  8951166 tttagttccttaatgtagacttcgttagtcattttagtttcttaaattgaccaactgagtctacattcaaagactgttttgcaatttctttacattcagg 8951067  T
Q  329 gattaaagt 337  Q
    || ||||||    
T  8951066 gactaaagt 8951058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 96 - 165
Target Start/End: Complemental strand, 30379017 - 30378948
Alignment:
Q  96 attagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaa 165  Q
    |||||||||||||||| ||||||||||||  ||| ||||||||||||||| |||||||| ||||||||||    
T  30379017 attagtcactttagtctctaaataggaaatgagtagtcactttagtcccttaatgcagagaaattgcaaa 30378948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 174 - 327
Target Start/End: Original strand, 47144767 - 47144920
Alignment:
Q  174 tgaatgtagactatgttagtcaatttagtccctaactgcatactctattagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaa 273  Q
    ||||||||||||  ||||||||||||||||| | | |  | ||||  ||| | | |||||| |||||||| ||| |||||| ||||||||||||| ||||    
T  47144767 tgaatgtagactcagttagtcaatttagtccttgaataaagactccgttaatcaatttagttcctgaatgcagactccgttggtcactttagtccttgaa 47144866  T
Q  274 attgaccaacatcgtctacattcaaagactgttttgcaatttctctgcattcag 327  Q
    |||||| ||||  || || ||| | ||||||||||||||||| | |||||||||    
T  47144867 attgactaacaaagtttatatttagagactgttttgcaatttatttgcattcag 47144920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 99 - 199
Target Start/End: Original strand, 22017885 - 22017985
Alignment:
Q  99 agtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtcaatt 198  Q
    |||||||||| ||||| ||| |||||  ||| |||||||||||||||||||||||| ||||||||||| | ||| |||||||| | | |||| |||||||    
T  22017885 agtcactttaatccctgaatgggaaaggagtagtcactttagtccctgaatgcagagaaattgcaaaacagtccctgaatgtatattctgttggtcaatt 22017984  T
Q  199 t 199  Q
    |    
T  22017985 t 22017985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 96 - 199
Target Start/End: Complemental strand, 5448475 - 5448372
Alignment:
Q  96 attagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtca 195  Q
    ||||||||||||| ||| | ||| | |||| | | |||||||||||||||||||||||| ||||||||||| | ||| |||||||| ||| |||| ||||    
T  5448475 attagtcactttactccgtgaatcgaaaaagaatagtcactttagtccctgaatgcagagaaattgcaaaacagtccctgaatgtaaactctgttggtca 5448376  T
Q  196 attt 199  Q
    ||||    
T  5448375 attt 5448372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 131 - 200
Target Start/End: Original strand, 37694935 - 37695004
Alignment:
Q  131 gtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtcaattta 200  Q
    |||||||||||||||||||||||| ||||||||||| | ||| |||||||||| | |||| |||||||||    
T  37694935 gtcactttagtccctgaatgcagagaaattgcaaaacagtccctgaatgtagattgtgttggtcaattta 37695004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 95 - 199
Target Start/End: Complemental strand, 9826912 - 9826808
Alignment:
Q  95 gattagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtc 194  Q
    |||||||||||||||| ||| |||  ||||| ||| ||||||| ||| | |||||||||| ||||||||||| | | | |||| ||||||| ||||||||    
T  9826912 gattagtcactttagttcctgaatcagaaaagagtagtcacttaagtacttgaatgcagagaaattgcaaaacagtgcttgaacgtagactctgttagtc 9826813  T
Q  195 aattt 199  Q
    |||||    
T  9826812 aattt 9826808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 92 - 148
Target Start/End: Complemental strand, 47463972 - 47463916
Alignment:
Q  92 ggagattagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaa 148  Q
    ||||||||||||||||||| ||| |||||||||  ||||||||||||||||||||||    
T  47463972 ggagattagtcactttagttcctgaataggaaatgagtcgtcactttagtccctgaa 47463916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 272 - 340
Target Start/End: Original strand, 55382732 - 55382800
Alignment:
Q  272 aaattgaccaacatcgtctacattcaaagactgttttgcaatttctctgcattcagagattaaagtgac 340  Q
    |||||||| ||||  ||||||||||| ||||| ||||||||||| ||||||||||| ||||||||||||    
T  55382732 aaattgactaacaaagtctacattcagagactattttgcaatttatctgcattcagggattaaagtgac 55382800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 96 - 199
Target Start/End: Complemental strand, 2063425 - 2063322
Alignment:
Q  96 attagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtca 195  Q
    ||||||||||||||||| | ||| |||||  ||| ||||||||| ||| ||| |||||| ||||||||||  | ||| |||||||||||| |||| ||||    
T  2063425 attagtcactttagtccttgaatgggaaatgagtagtcactttaatccttgattgcagagaaattgcaaagcagtccctgaatgtagactctgttggtca 2063326  T
Q  196 attt 199  Q
    ||||    
T  2063325 attt 2063322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 91 - 202
Target Start/End: Complemental strand, 8951272 - 8951161
Alignment:
Q  91 aggagattagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgtt 190  Q
    ||||||||||| | |||||||| | |||||||||  | ||||||| ||||| |||||||  |||||||| | |||||| | | |||||||||| | ||||    
T  8951272 aggagattagttaatttagtccatcaataggaaaggaatcgtcacattagttcctgaatatagataaatggtaaaatagttcctgaatgtagattttgtt 8951173  T
Q  191 agtcaatttagt 202  Q
    ||||||||||||    
T  8951172 agtcaatttagt 8951161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 96 - 199
Target Start/End: Original strand, 12140667 - 12140770
Alignment:
Q  96 attagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtca 195  Q
    ||||||||||||| ||| |||||  |||| |||||||||||||| ||| |||||||| | ||||||||||| | ||| | ||| |||||| ||||| |||    
T  12140667 attagtcactttaatccttaaatgagaaataagtcgtcactttaatccttgaatgcaaagaaattgcaaaacagtccctaaatatagactttgttaatca 12140766  T
Q  196 attt 199  Q
    ||||    
T  12140767 attt 12140770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 96 - 199
Target Start/End: Original strand, 18830575 - 18830677
Alignment:
Q  96 attagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtca 195  Q
    ||||||||||||||||||| |||  ||||  ||| ||||||||||||| || ||||||||||||||| ||| | ||| |||||||||| | |||| ||||    
T  18830575 attagtcactttagtccctgaatgagaaatgagtagtcactttagtcc-tggatgcagataaattgctaaacagtccctgaatgtagattctgttggtca 18830673  T
Q  196 attt 199  Q
    ||||    
T  18830674 attt 18830677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 96 - 199
Target Start/End: Original strand, 2232372 - 2232475
Alignment:
Q  96 attagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtca 195  Q
    ||||||||||||||| |||||||   |||  ||| |||| ||||||||||||||  ||| ||||||||||| ||||| | |||||||| | |||| ||||    
T  2232372 attagtcactttagttcctaaatgaaaaatgagtagtcaatttagtccctgaatagagagaaattgcaaaacaatccctcaatgtagattctgttggtca 2232471  T
Q  196 attt 199  Q
    ||||    
T  2232472 attt 2232475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 96 - 199
Target Start/End: Original strand, 2634024 - 2634127
Alignment:
Q  96 attagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtca 195  Q
    ||||||||||||||||| | |||  ||||| ||| |||||||||| | | |||||| || ||||||||||| | ||| |||||||||||| | || ||||    
T  2634024 attagtcactttagtccatgaatgagaaaagagtagtcactttagccgccgaatgctgagaaattgcaaaacagtccctgaatgtagactttattggtca 2634123  T
Q  196 attt 199  Q
    ||||    
T  2634124 attt 2634127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 287 - 379
Target Start/End: Complemental strand, 55382666 - 55382572
Alignment:
Q  287 gtctacattcaaagactgttttgcaatttctctgcattcagagattaaagtgactact--ttttccattaagggattaaagtgaataattctcct 379  Q
    ||||| |||||| ||||| |||||||||||||||||||||  || |||||||||||||  ||||||||| | | | |||| ||| ||||||||||    
T  55382666 gtctatattcaaggactgctttgcaatttctctgcattcacggactaaagtgactactcattttccattcaagaactaaaatgactaattctcct 55382572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 97 - 199
Target Start/End: Original strand, 5324684 - 5324786
Alignment:
Q  97 ttagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtcaa 196  Q
    |||||||||||||||||| |||  ||||  ||| ||| |||||| | ||| ||||||| ||||||||||| | ||  |||||||||||| |||| |||||    
T  5324684 ttagtcactttagtccctgaatgtgaaaggagtagtcgctttagcctctggatgcagagaaattgcaaaacagtctttgaatgtagactctgttggtcaa 5324783  T
Q  197 ttt 199  Q
    |||    
T  5324784 ttt 5324786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 340
Target Start/End: Original strand, 18830766 - 18830818
Alignment:
Q  288 tctacattcaaagactgttttgcaatttctctgcattcagagattaaagtgac 340  Q
    ||||||||||| |||| ||||||||||| ||||||||||| || |||||||||    
T  18830766 tctacattcaaggactattttgcaatttatctgcattcagggactaaagtgac 18830818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 160
Target Start/End: Original strand, 18836280 - 18836344
Alignment:
Q  96 attagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaatt 160  Q
    |||||||| ||| |||||| |||  ||||  ||| ||||||||||||||||||||||||||||||    
T  18836280 attagtcatttttgtccctgaatgagaaatgagtagtcactttagtccctgaatgcagataaatt 18836344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 96 - 171
Target Start/End: Complemental strand, 11822006 - 11821931
Alignment:
Q  96 attagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatc 171  Q
    |||||| |||||||||| | ||| |||||  |||  | ||||||||||||||||||||| ||||||||||| ||||    
T  11822006 attagttactttagtccttcaatgggaaatgagtacttactttagtccctgaatgcagagaaattgcaaaacaatc 11821931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 272 - 330
Target Start/End: Original strand, 22018026 - 22018084
Alignment:
Q  272 aaattgaccaacatcgtctacattcaaagactgttttgcaatttctctgcattcagaga 330  Q
    |||| ||| ||||| |||||||||||  |||| ||||||||||| ||||||||||||||    
T  22018026 aaatagactaacatagtctacattcagggactattttgcaatttatctgcattcagaga 22018084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 200
Target Start/End: Original strand, 8951023 - 8951124
Alignment:
Q  99 agtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtcaatt 198  Q
    |||||||||||||| || || | |||| | | || ||||||||||||||||| | | ||||||||||| | ||  ||||||||||||  ||| |||||||    
T  8951023 agtcactttagtccatatattgaaaaagaatggttactttagtccctgaatgtaaagaaattgcaaaacagtctttgaatgtagactcagttggtcaatt 8951122  T
Q  199 ta 200  Q
    ||    
T  8951123 ta 8951124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 266
Target Start/End: Complemental strand, 1387511 - 1387419
Alignment:
Q  174 tgaatgtagactatgttagtcaatttagtccctaactgcatactctattagttactttagtccctgaatgtagaatccgttagtcactttagt 266  Q
    |||||| ||||| ||||||||||||||||| || | || | ||| | ||||| |||||||| |||||||| | |  |||||||||| ||||||    
T  1387511 tgaatgcagactctgttagtcaatttagtcgctgaatgtagactttgttagtcactttagttcctgaatgcaaaccccgttagtcaatttagt 1387419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 131 - 199
Target Start/End: Original strand, 30470853 - 30470921
Alignment:
Q  131 gtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtcaattt 199  Q
    ||||||||||| |||||||||||| ||||||||||| | ||| | |||||||  | |||| ||||||||    
T  30470853 gtcactttagttcctgaatgcagagaaattgcaaaacactccctaaatgtagcatttgttggtcaattt 30470921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 121; Significance: 7e-62; HSPs: 2)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 92 - 379
Target Start/End: Original strand, 23888 - 24176
Alignment:
Q  92 ggagattagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgtta 191  Q
    ||||||||||||||||||| |||||||||||||  ||||||| ||||||||| |||||  ||||||||||||||||  |||  |||||||||||| ||||    
T  23888 ggagattagtcactttagttcctaaataggaaatgagtcgtccctttagtccttgaatatagataaattgcaaaatggtccccgaatgtagactacgtta 23987  T
Q  192 gtcaatttagtccctaactgcatactctattagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtcta 291  Q
    ||||||||||||||| | |||| ||||| || || | |||||||| |||||||||| |   || |||||||| |||| |||||||||||||||   ||||    
T  23988 gtcaatttagtccctgaatgcagactctgttggtcaatttagtccttgaatgtagactttattcgtcacttttgtccatgaaattgaccaacagaatcta 24087  T
Q  292 cattcaaagactgttttgcaatttctctgcattcagagattaaagtgactact-ttttccattaagggattaaagtgaataattctcct 379  Q
    ||||||  || ||||||||||||||||||||||||| || ||||   |||||| ||||||||| |||||||||||||| ||||||||||    
T  24088 cattcagggattgttttgcaatttctctgcattcagggactaaaacaactactcttttccattcagggattaaagtgactaattctcct 24176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 96 - 199
Target Start/End: Complemental strand, 24170 - 24068
Alignment:
Q  96 attagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtca 195  Q
    ||||||||||||| ||||| ||| |||||| ||| ||   ||||||||||||||||||| ||||||||||| ||||| |||||||||| | |||| ||||    
T  24170 attagtcactttaatccctgaat-ggaaaagagtagttgttttagtccctgaatgcagagaaattgcaaaacaatccctgaatgtagattctgttggtca 24072  T
Q  196 attt 199  Q
    ||||    
T  24071 attt 24068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 115; Significance: 3e-58; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 116 - 375
Target Start/End: Original strand, 22092880 - 22093141
Alignment:
Q  116 aataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtcaatttagtccctaactgcata 215  Q
    |||||||||  ||||||||||||||||| ||| ||||||||||||| |||||| ||| |||||||||||| ||||||||| |||||| ||| | |||| |    
T  22092880 aataggaaaggagtcgtcactttagtccttgattgcagataaattgtaaaatagtccctgaatgtagactctgttagtcagtttagttcctgaatgcaga 22092979  T
Q  216 ctctattagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtctacattcaaagactgttttgcaattt 315  Q
    ||| ||| || | |||||||||||||| |||| |||||| |||||||||||||||||| ||||||||||   |||||||||| |||||||||||||||||    
T  22092980 ctccattcgtcaatttagtccctgaatatagactccgtttgtcactttagtccctgaatttgaccaacagaatctacattcagagactgttttgcaattt 22093079  T
Q  316 ctctgcattcagagattaaagtgacta--ctttttccattaagggattaaagtgaataattc 375  Q
    |||| ||||||| || |||||| ||||  | ||||||||| ||| | |||||||| ||||||    
T  22093080 ctctacattcagggactaaagtaactaatcattttccattcaggaactaaagtgattaattc 22093141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 96 - 315
Target Start/End: Complemental strand, 39598786 - 39598567
Alignment:
Q  96 attagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtca 195  Q
    ||||||||||||||||||| ||||||||| || |  ||| ||||||| ||||||||||||||||||||||||| ||| |||||||||||| |||| ||||    
T  39598786 attagtcactttagtccctcaataggaaagaaattttcattttagtcactgaatgcagataaattgcaaaatagtccctgaatgtagactttgttggtca 39598687  T
Q  196 atttagtccctaactgcatactctattagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtctacatt 295  Q
    |||||||| || | || ||||||  ||||| | ||||||||||||||||||| |||||||||||||||||||||| |||||||| ||||  |||||||||    
T  39598686 atttagtcgctgaatgtatactccgttagtcaatttagtccctgaatgtagactccgttagtcactttagtccctaaaattgactaacaaagtctacatt 39598587  T
Q  296 caaagactgttttgcaattt 315  Q
    |||  ||||||||| |||||    
T  39598586 caagaactgttttgtaattt 39598567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 92 - 342
Target Start/End: Original strand, 31819911 - 31820160
Alignment:
Q  92 ggagattagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgtta 191  Q
    |||||||||||||||||||||| || |||||||  | |||||| |||||||||| ||||||||||||||| |||||| ||  |||||||||||| |||||    
T  31819911 ggagattagtcactttagtcccgaa-taggaaaggaatcgtcattttagtccctaaatgcagataaattggaaaatagtcactgaatgtagactctgtta 31820009  T
Q  192 gtcaatttagtccctaactgcatactctattagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtcta 291  Q
    ||| ||||||||| | | |||| ||| | ||||| | ||||||| ||||||||| | ||||||| |||||||||||||| |||||||| ||||   ||||    
T  31820010 gtccatttagtccttgaatgcagactttcttagtcaatttagtctctgaatgtatactccgttaatcactttagtccctaaaattgactaacagaatcta 31820109  T
Q  292 cattcaaagactgttttgcaatttctctgcattcagagattaaagtgacta 342  Q
    ||||||   ||||||||| | |||||||| ||||||| | |||| ||||||    
T  31820110 cattcatgaactgttttgtattttctctgtattcagaaactaaaatgacta 31820160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 96 - 348
Target Start/End: Complemental strand, 24007159 - 24006907
Alignment:
Q  96 attagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtca 195  Q
    |||||||||||| |||| | | |||||||  |||||| |||||||||| ||||| ||||||||||| ||||||  |  |||||||||||| |||||||||    
T  24007159 attagtcactttggtccttgactaggaaatgagtcgttactttagtccttgaatacagataaattgtaaaatagactttgaatgtagactctgttagtca 24007060  T
Q  196 atttagtccctaactgcatactctattagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtctacatt 295  Q
    ||||||||| | | |||| | ||  ||  | | | |||| |||||||||||| || |||| ||| ||||||| ||||||||||  ||||  |||||||||    
T  24007059 atttagtccatgaatgcagattccgttgatcaatgtagtacctgaatgtagactctgttaatcattttagtctctgaaattgagtaacagagtctacatt 24006960  T
Q  296 caaagactgttttgcaatttctctgcattcagagattaaagtgactacttttt 348  Q
    ||  |||||||||||||||||||||||||||| || ||||||||||| |||||    
T  24006959 cagggactgttttgcaatttctctgcattcagggactaaagtgactaattttt 24006907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 215 - 375
Target Start/End: Complemental strand, 32092919 - 32092757
Alignment:
Q  215 actctattagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtctacattcaaagactgttttgcaatt 314  Q
    ||||| ||||| | ||||||||||||||||||| | |||||||||||||||| ||||| |||||| ||||  |||||||||||  |||||||||||||||    
T  32092919 actctgttagtcaatttagtccctgaatgtagacttcgttagtcactttagttcctgagattgacaaacagagtctacattcagggactgttttgcaatt 32092820  T
Q  315 tctctgcattcagagattaaagtgactact--ttttccattaagggattaaagtgaataattc 375  Q
    ||||||||||||| || |||||||||||||  ||| ||||| ||||| |||||||| ||||||    
T  32092819 tctctgcattcagggactaaagtgactactcatttcccattcagggactaaagtgactaattc 32092757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 92 - 345
Target Start/End: Complemental strand, 31499634 - 31499381
Alignment:
Q  92 ggagattagtcactttagtccctaaataggaaaaaagtc-gtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgtt 190  Q
    |||| ||||||||||||||  |  |||| ||||| |||| ||||||||| ||  |||||| |||||||||| |||||| ||| |||||||||| | ||||    
T  31499634 ggagtttagtcactttagtgaccgaataagaaaatagtcagtcactttaatctttgaatgtagataaattgtaaaatagtccctgaatgtagaatctgtt 31499535  T
Q  191 agtcaatttagtccctaactgcatactctattagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtct 290  Q
    ||||| ||||||  || | |||| ||||  ||||| | |||||||| |||||||||| |   || |||||||| ||||||||||||||||||||   |||    
T  31499534 agtcattttagtttctgaatgcagactccgttagtcaatttagtccttgaatgtagactttatttgtcactttggtccctgaaattgaccaacaaaatct 31499435  T
Q  291 acattcaaagactgttttgcaatttctctgcattcagagattaaagtgactactt 345  Q
    ||||| |||||||||||||||||||||||| ||| |   ||||||||||||||||    
T  31499434 acatt-aaagactgttttgcaatttctctgtatttaagaattaaagtgactactt 31499381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 131 - 206
Target Start/End: Complemental strand, 32092971 - 32092896
Alignment:
Q  131 gtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtcaatttagtccct 206  Q
    ||||||||||||||||||||||||||||||| |||||| ||| |||||||||||| ||||||||||||||||||||    
T  32092971 gtcactttagtccctgaatgcagataaattgaaaaatagtccctgaatgtagactctgttagtcaatttagtccct 32092896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 96 - 197
Target Start/End: Original strand, 32092759 - 32092860
Alignment:
Q  96 attagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtca 195  Q
    ||||||||||||||||||| ||| |||||  ||| |||||||||||||||||||||||| ||||||||||| | ||| |||||||||||| |||| ||||    
T  32092759 attagtcactttagtccctgaatgggaaatgagtagtcactttagtccctgaatgcagagaaattgcaaaacagtccctgaatgtagactctgtttgtca 32092858  T
Q  196 at 197  Q
    ||    
T  32092859 at 32092860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 99 - 199
Target Start/End: Original strand, 24006883 - 24006983
Alignment:
Q  99 agtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtcaatt 198  Q
    ||||||||| ||  || ||| |||||||| | |||||||||||||||||||||||| ||||||||||| | ||| |||||||||||| ||||| ||||||    
T  24006883 agtcactttggtttctgaatgggaaaaaattagtcactttagtccctgaatgcagagaaattgcaaaacagtccctgaatgtagactctgttactcaatt 24006982  T
Q  199 t 199  Q
    |    
T  24006983 t 24006983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 126 - 208
Target Start/End: Original strand, 17914036 - 17914117
Alignment:
Q  126 aagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtcaatttagtccctaa 208  Q
    ||||||||| |||||||| | || ||| ||||||||||||||||||| |||||||||| | ||||||||||||||| ||||||    
T  17914036 aagtcgtcattttagtcc-taaacgcaaataaattgcaaaataatccttgaatgtagattttgttagtcaatttagaccctaa 17914117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 229 - 325
Target Start/End: Original strand, 17914106 - 17914202
Alignment:
Q  229 tttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtctacattcaaagactgttttgcaatttctctgcattc 325  Q
    ||||| |||| |||||||| |  ||||||||||||| || || |||||||| || |  ||||||||||||| ||||||||||||||||||| |||||    
T  17914106 tttagaccctaaatgtagattttgttagtcactttaatcactaaaattgactaatagagtctacattcaaaaactgttttgcaatttctctacattc 17914202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 149 - 261
Target Start/End: Original strand, 8219193 - 8219304
Alignment:
Q  149 tgcagataaattgcaaaataatccatgaatgtagactatgttagtcaatttagtccctaactgcatactctattagttactttagtccctgaatgtagaa 248  Q
    |||| |||||||| |||||| ||  |||||||||||| ||||||||||||||||  || | |||| ||||  ||||| | |||| ||||||||||| ||     
T  8219193 tgcaaataaattgtaaaatagtct-tgaatgtagactctgttagtcaatttagtttctgaatgcagactccgttagtcaatttaatccctgaatgtggac 8219291  T
Q  249 tccgttagtcact 261  Q
    |||||||||||||    
T  8219292 tccgttagtcact 8219304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 272 - 327
Target Start/End: Original strand, 39598683 - 39598738
Alignment:
Q  272 aaattgaccaacatcgtctacattcaaagactgttttgcaatttctctgcattcag 327  Q
    |||||||||||||  |||||||||||  |||| ||||||||||| |||||||||||    
T  39598683 aaattgaccaacaaagtctacattcagggactattttgcaatttatctgcattcag 39598738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 231 - 273
Target Start/End: Complemental strand, 32092935 - 32092893
Alignment:
Q  231 tagtccctgaatgtagaatccgttagtcactttagtccctgaa 273  Q
    ||||||||||||||||| || |||||||| |||||||||||||    
T  32092935 tagtccctgaatgtagactctgttagtcaatttagtccctgaa 32092893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 272 - 342
Target Start/End: Original strand, 32092903 - 32092973
Alignment:
Q  272 aaattgaccaacatcgtctacattcaaagactgttttgcaatttctctgcattcagagattaaagtgacta 342  Q
    |||||||| ||||  |||||||||||  |||| |||| |||||| ||||||||||| || |||||||||||    
T  32092903 aaattgactaacagagtctacattcagggactatttttcaatttatctgcattcagggactaaagtgacta 32092973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 98; Significance: 4e-48; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 89 - 375
Target Start/End: Complemental strand, 190463 - 190176
Alignment:
Q  89 aaaggagattagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatg 188  Q
    ||||||||||||||| |||||| ||| ||||| |||| | ||||  ||||| |||||||||| ||||||||||||||||| |   | |||  ||||| ||    
T  190463 aaaggagattagtca-tttagttcctgaatagaaaaagaatcgttcctttaatccctgaatgtagataaattgcaaaatagtttctaaatacagactttg 190365  T
Q  189 ttagtcaatttagtccctaactgcatactctattagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgt 288  Q
    |||||||||||||| ||| | | || ||||| ||||| | |||||||||| |||||| | |  |||| ||| |||| |||||||||||||||||||  ||    
T  190364 ttagtcaatttagttcctgaatacagactctgttagtcaatttagtccctaaatgtaaactatgttaatcaatttaatccctgaaattgaccaacagagt 190265  T
Q  289 ctacattcaaagactgttttgcaatttctctgcattcagagattaaagtgacta--ctttttccattaagggattaaagtgaataattc 375  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||| ||||||  ||||| ||||| ||||| |||| ||| ||||||    
T  190264 ctacattcagagactgttttgcaatttctctgcattcagagactaaaatgactactcttttcccattcagggactaaaatgactaattc 190176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 96 - 199
Target Start/End: Original strand, 190178 - 190281
Alignment:
Q  96 attagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtca 195  Q
    |||||||| |||||||||| ||| |||||| ||| |||| ||||||| ||||||||||| ||||||||||| | ||  |||||||||||| |||| ||||    
T  190178 attagtcattttagtccctgaatgggaaaagagtagtcattttagtctctgaatgcagagaaattgcaaaacagtctctgaatgtagactctgttggtca 190277  T
Q  196 attt 199  Q
    ||||    
T  190278 attt 190281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 88; Significance: 4e-42; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 144 - 315
Target Start/End: Original strand, 314126 - 314296
Alignment:
Q  144 ctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtcaatttagtccctaactgcatactctattagttactttagtccctgaatg 243  Q
    |||||||||||| |||||||||||| ||| | |||||||||| |||||||||||||||||||| | |||| ||||  ||||| | |||||||||||||||    
T  314126 ctgaatgcagattaattgcaaaatagtccctaaatgtagactctgttagtcaatttagtccctgaatgcagactccgttagtcaatttagtccctgaatg 314225  T
Q  244 tagaatccgttagtcactttagtccctgaaattgaccaacatcgtctacattcaaagactgttttgcaattt 315  Q
    |||| || ||||||||||||||||||||||||| |||||||  |||||||||  | ||||||||||||||||    
T  314226 tagagtctgttagtcactttagtccctgaaattaaccaacagagtctacatt-taggactgttttgcaattt 314296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1300 (Bit Score: 83; Significance: 3e-39; HSPs: 2)
Name: scaffold1300
Description:

Target: scaffold1300; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 96 - 344
Target Start/End: Original strand, 1357 - 1598
Alignment:
Q  96 attagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtca 195  Q
    ||||||||||||||||| | ||||||||| || |  |||||||||||||| |||||||||||||||||||||| ||        || ||||||||| |||    
T  1357 attagtcactttagtccttgaataggaaataaattatcactttagtccctaaatgcagataaattgcaaaatagtct-------tatactatgttaatca 1449  T
Q  196 atttagtccctaactgcatactctattagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtctacatt 295  Q
    | |||||| || | |||| |||   ||||||| ||||||||||||||||||| ||  |||||||| ||| ||| |||||||||| ||||  |||||| ||    
T  1450 acttagtctctgaatgcagacttcgttagttaatttagtccctgaatgtagactcaattagtcacattaatccttgaaattgactaacagagtctacgtt 1549  T
Q  296 caaagactgttttgcaatttctctgcattcagagattaaagtgactact 344  Q
    ||| |||||||||||||||||||||||||||  || | |||||||||||    
T  1550 caaggactgttttgcaatttctctgcattcaaggacttaagtgactact 1598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1300; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 95 - 199
Target Start/End: Complemental strand, 1630 - 1526
Alignment:
Q  95 gattagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtc 194  Q
    |||||||||||||||| ||| |||  ||||| ||| ||||||| ||||| |||||||||| ||||||||||| | ||| |||| ||||||| ||||||||    
T  1630 gattagtcactttagttcctgaatgagaaaagagtagtcacttaagtccttgaatgcagagaaattgcaaaacagtccttgaacgtagactctgttagtc 1531  T
Q  195 aattt 199  Q
    |||||    
T  1530 aattt 1526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 79; Significance: 8e-37; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 98 - 324
Target Start/End: Original strand, 57451 - 57677
Alignment:
Q  98 tagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtcaat 197  Q
    |||||||||| |||||| ||||||||| || |  |||||||||||| ||||||||||||||||| |||||| |   |||||||| ||||||||||||||     
T  57451 tagtcactttggtccctgaataggaaagaaattatcactttagtccatgaatgcagataaattgaaaaatagtttctgaatgtatactatgttagtcaac 57550  T
Q  198 ttagtccctaactgcatactctattagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtctacattca 297  Q
    |||||  || | |||| |||   ||| | | |||||||||||||| |||| || ||||||||| ||| ||| |||||||||| ||||  |||||| ||||    
T  57551 ttagtatctgaatgcagacttcgttaatcaatttagtccctgaatttagactcagttagtcacattaatccttgaaattgactaacagagtctacgttca 57650  T
Q  298 aagactgttttgcaatttctctgcatt 324  Q
    |  ||||||||||||||||||||||||    
T  57651 agcactgttttgcaatttctctgcatt 57677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 95 - 199
Target Start/End: Complemental strand, 57729 - 57625
Alignment:
Q  95 gattagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtc 194  Q
    |||||||||||||||| ||| |||  ||||| ||| ||||||| ||| | | |||||||| ||||||||||| | | | |||| ||||||| ||||||||    
T  57729 gattagtcactttagttcctgaatcagaaaagagtagtcacttaagtactttaatgcagagaaattgcaaaacagtgcttgaacgtagactctgttagtc 57630  T
Q  195 aattt 199  Q
    |||||    
T  57629 aattt 57625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 79; Significance: 8e-37; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 96 - 326
Target Start/End: Original strand, 127804 - 128034
Alignment:
Q  96 attagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtca 195  Q
    |||||||||||| |||||| ||||||||| || |  |||||||||||| |||||||||||||||||||||||| |   |||||||| |||||||||||||    
T  127804 attagtcactttggtccctgaataggaaagaaattatcactttagtccatgaatgcagataaattgcaaaatagtttctgaatgtatactatgttagtca 127903  T
Q  196 atttagtccctaactgcatactctattagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtctacatt 295  Q
    | |||||  || | |||| |||   ||| | | |||| |||| |||| |||| || ||||||||| ||| ||| |||||||||| ||||  |||||| ||    
T  127904 acttagtatctgaatgcagacttcgttaatcaatttaatcccagaatttagactcagttagtcacattaatccttgaaattgactaacagagtctacgtt 128003  T
Q  296 caaagactgttttgcaatttctctgcattca 326  Q
    |||  ||||||||||||||||||||||||||    
T  128004 caagcactgttttgcaatttctctgcattca 128034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 95 - 199
Target Start/End: Complemental strand, 128084 - 127980
Alignment:
Q  95 gattagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtc 194  Q
    |||||||||||||||| ||| |||  ||||| ||| ||||||| ||| | |||||||||| ||||||||||| | | | |||| ||||||| ||||||||    
T  128084 gattagtcactttagttcctgaatcagaaaagagtagtcacttaagtacttgaatgcagagaaattgcaaaacagtgcttgaacgtagactctgttagtc 127985  T
Q  195 aattt 199  Q
    |||||    
T  127984 aattt 127980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 72; Significance: 1e-32; HSPs: 2)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 93 - 341
Target Start/End: Original strand, 15362 - 15605
Alignment:
Q  93 gagattagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttag 192  Q
    |||||||||||||||||||  | |||  ||||  ||| ||||||||||||| ||||||||||||||||| |||||| ||  |||||||||||| ||||||    
T  15362 gagattagtcactttagtctttgaattagaaatgagttgtcactttagtccttgaatgcagataaattgtaaaatagtctctgaatgtagactctgttag 15461  T
Q  193 tcaatttagtccctaactgcatactctattagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtctac 292  Q
    |||||||| || || | || | ||||  ||||  | ||||||| ||||||||||| || || ||||  |||||| |||||||||||| ||||  ||        
T  15462 tcaatttaatctctgaatgtagactccgttagccaatttagtctctgaatgtagattctgtcagtcgttttagtacctgaaattgactaacaaagt---- 15557  T
Q  293 attcaaagactgttttgcaatttctctgcattcagagattaaagtgact 341  Q
    |||| | ||||||||||||||||||||||||||||||| |||| |||||    
T  15558 attc-aggactgttttgcaatttctctgcattcagagactaaattgact 15605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 340
Target Start/End: Complemental strand, 15468 - 15400
Alignment:
Q  272 aaattgaccaacatcgtctacattcaaagactgttttgcaatttctctgcattcagagattaaagtgac 340  Q
    |||||||| ||||  ||||||||||| ||||| |||| |||||| ||||||||||  || |||||||||    
T  15468 aaattgactaacagagtctacattcagagactattttacaatttatctgcattcaaggactaaagtgac 15400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 71; Significance: 5e-32; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 229 - 343
Target Start/End: Complemental strand, 59851 - 59737
Alignment:
Q  229 tttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtctacattcaaagactgttttgcaatttctctgcattcaga 328  Q
    ||||||||||||||| ||| ||||||||||| ||||||||||||||||||| ||||  |||||||||||  | ||||||||||||||||||||||||||     
T  59851 tttagtccctgaatgcagactccgttagtcaatttagtccctgaaattgactaacagagtctacattcaggggctgttttgcaatttctctgcattcagg 59752  T
Q  329 gattaaagtgactac 343  Q
    || ||||||||||||    
T  59751 gactaaagtgactac 59737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 102 - 199
Target Start/End: Original strand, 59711 - 59808
Alignment:
Q  102 cactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtcaattt 199  Q
    ||||||||||||| ||| |||||   || |||||||||||||||||||||||| ||||||||||| |  || |||||||||||| |||||||||||||    
T  59711 cactttagtccctcaatgggaaaggtgtagtcactttagtccctgaatgcagagaaattgcaaaacagcccctgaatgtagactctgttagtcaattt 59808  T

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Target: scaffold0407 (Bit Score: 70; Significance: 2e-31; HSPs: 6)
Name: scaffold0407
Description:

Target: scaffold0407; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 188 - 341
Target Start/End: Complemental strand, 1022 - 870
Alignment:
Q  188 gttagtcaatttagtccctaactgcatactctattagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcg 287  Q
    ||||||||||||||||||| | |||| |||   ||||| | |||| |||||||||||||| |  |||||||||||||||||||||||||||| || |  |    
T  1022 gttagtcaatttagtccctgaatgcagacttcgttagtcaatttaatccctgaatgtagactttgttagtcactttagtccctgaaattgactaatagag 923  T
Q  288 tctacattcaaagactgttttgcaatttctctgcattcagagattaaagtgact 341  Q
    ||||||||| | |||||||||||||||||||||||||||| || ||||||||||    
T  922 tctacattc-aggactgttttgcaatttctctgcattcagggactaaagtgact 870  T

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Target: scaffold0407; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 188 - 341
Target Start/End: Complemental strand, 7486 - 7334
Alignment:
Q  188 gttagtcaatttagtccctaactgcatactctattagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcg 287  Q
    ||||||||||||||||||| | |||| |||   ||||| | |||| |||||||||||||| |  |||||||||||||||||||||||||||| || |  |    
T  7486 gttagtcaatttagtccctgaatgcagacttcgttagtcaatttaatccctgaatgtagactttgttagtcactttagtccctgaaattgactaatagag 7387  T
Q  288 tctacattcaaagactgttttgcaatttctctgcattcagagattaaagtgact 341  Q
    ||||||||| | |||||||||||||||||||||||||||| || ||||||||||    
T  7386 tctacattc-aggactgttttgcaatttctctgcattcagggactaaagtgact 7334  T

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Target: scaffold0407; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 131 - 273
Target Start/End: Complemental strand, 1111 - 969
Alignment:
Q  131 gtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtcaatttagtccctaactgcatactctattagttactt 230  Q
    ||||||||||||| |||||||| ||||||| ||||||| ||| |||| ||||||| | ||| |||||||||||||| | |||| | |   ||||| | ||    
T  1111 gtcactttagtccttgaatgcaaataaattacaaaatagtccctgaacgtagactttattattcaatttagtccctgaatgcagatttcgttagtcaatt 1012  T
Q  231 tagtccctgaatgtagaatccgttagtcactttagtccctgaa 273  Q
    ||||||||||||| ||| | ||||||||| |||| ||||||||    
T  1011 tagtccctgaatgcagacttcgttagtcaatttaatccctgaa 969  T

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Target: scaffold0407; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 131 - 273
Target Start/End: Complemental strand, 7575 - 7433
Alignment:
Q  131 gtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtcaatttagtccctaactgcatactctattagttactt 230  Q
    ||||||||||||| |||||||| ||||||| ||||||| ||| |||| ||||||| | ||| |||||||||||||| | |||| | |   ||||| | ||    
T  7575 gtcactttagtccttgaatgcaaataaattacaaaatagtccctgaacgtagactttattattcaatttagtccctgaatgcagatttcgttagtcaatt 7476  T
Q  231 tagtccctgaatgtagaatccgttagtcactttagtccctgaa 273  Q
    ||||||||||||| ||| | ||||||||| |||| ||||||||    
T  7475 tagtccctgaatgcagacttcgttagtcaatttaatccctgaa 7433  T

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Target: scaffold0407; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 131 - 199
Target Start/End: Original strand, 871 - 938
Alignment:
Q  131 gtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtcaattt 199  Q
    |||||||||||||||||||||||| ||||||||||| | ||| |||||||||||| | |||||||||||    
T  871 gtcactttagtccctgaatgcagagaaattgcaaaacagtcc-tgaatgtagactctattagtcaattt 938  T

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Target: scaffold0407; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 131 - 199
Target Start/End: Original strand, 7335 - 7402
Alignment:
Q  131 gtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtcaattt 199  Q
    |||||||||||||||||||||||| ||||||||||| | ||| |||||||||||| | |||||||||||    
T  7335 gtcactttagtccctgaatgcagagaaattgcaaaacagtcc-tgaatgtagactctattagtcaattt 7402  T

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Target: scaffold0039 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 90 - 375
Target Start/End: Complemental strand, 27761 - 27487
Alignment:
Q  90 aaggagattagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgt 189  Q
    ||||| ||||||||||| ||||||| | |||||||  ||||||||||||||||  |||||||| |||||||||||||||             |||   |     
T  27761 aaggatattagtcacttaagtccctgattaggaaagtagtcgtcactttagtctatgaatgcaaataaattgcaaaata-------------gaccccgc 27675  T
Q  190 tagtcaatttagtccctaactgcatactctattagttactttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtc 289  Q
    ||| ||||||||||||| | | ||||| |  ||||| | |||| | |||||||||||| | |||| ||||||||||||| |||||||||||||||  |||    
T  27674 tagccaatttagtccctgaatacataccccgttagtcaatttacttcctgaatgtagacttcgttcgtcactttagtccttgaaattgaccaacagagtc 27575  T
Q  290 tacattcaaagactgttttgcaatttctctgcattcagagattaaagtgactact--ttttccattaagggattaaagtgaataattc 375  Q
    |||||| | |||||||||||||||||||| | |||||| |  |||||| ||||||  ||||| ||| ||||| |||||||| ||||||    
T  27574 tacattaagagactgttttgcaatttctccgtattcaggggctaaagtaactactcattttctattcagggactaaagtgactaattc 27487  T

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Target: scaffold0039; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 96 - 199
Target Start/End: Original strand, 27489 - 27592
Alignment:
Q  96 attagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgttagtca 195  Q
    ||||||||||||||||||| ||||| |||  ||| || ||||||| |||||||| | || ||||||||||| | ||  | |||||||||| |||| ||||    
T  27489 attagtcactttagtccctgaatagaaaatgagtagttactttagcccctgaatacggagaaattgcaaaacagtctcttaatgtagactctgttggtca 27588  T
Q  196 attt 199  Q
    ||||    
T  27589 attt 27592  T

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Target: scaffold0047 (Bit Score: 63; Significance: 3e-27; HSPs: 3)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 92 - 238
Target Start/End: Original strand, 11602 - 11747
Alignment:
Q  92 ggagattagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtagactatgtta 191  Q
    |||||||||||||||||||| || |||||||||  |||||| | |||||||| | ||||||||||||||| |||||| ||| ||||||||||||||||||    
T  11602 ggagattagtcactttagtcactgaataggaaatgagtcgttattttagtcc-taaatgcagataaattgtaaaatagtccctgaatgtagactatgtta 11700  T
Q  192 gtcaatttagtccctaactgcatactctattagttactttagtccct 238  Q
    | ||||||| || || | || ||| ||| ||||| ||||||||||||    
T  11701 ggcaatttaatctctgaatgtatattctgttagtcactttagtccct 11747  T

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Target: scaffold0047; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 237 - 344
Target Start/End: Original strand, 11714 - 11819
Alignment:
Q  237 ctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtctacattcaaagactgttttgcaatttctctgcattcagagattaaag 336  Q
    ||||||||| | || ||||||||||||||||||| |||||||| || |  |||||  || || |||| ||||||||||||||||||||||| || |||||    
T  11714 ctgaatgtatattctgttagtcactttagtccctaaaattgactaagagagtcta--tttaaggactattttgcaatttctctgcattcagggactaaag 11811  T
Q  337 tgactact 344  Q
     |||||||    
T  11812 cgactact 11819  T

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Target: scaffold0047; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 11850 - 11778
Alignment:
Q  96 attagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaata 168  Q
    |||| ||||||||||  || ||| |||||  ||| ||| |||||||||||||||||||| |||||||||||||    
T  11850 attaatcactttagtttctgaatgggaaatgagtagtcgctttagtccctgaatgcagagaaattgcaaaata 11778  T

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Target: scaffold0018 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 5)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 229 - 317
Target Start/End: Original strand, 72015 - 72103
Alignment:
Q  229 tttagtccctgaatgtagaatccgttagtcactttagtccctgaaattgaccaacatcgtctacattcaaagactgttttgcaatttct 317  Q
    ||||||||||||||| | | |  |||||||| ||||||||||||||||||||| ||   ||||||||||  ||||||||||||||||||    
T  72015 tttagtccctgaatgcaaactttgttagtcaatttagtccctgaaattgaccatcaaaatctacattcagggactgttttgcaatttct 72103  T

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Target: scaffold0018; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 96 - 180
Target Start/End: Complemental strand, 72190 - 72106
Alignment:
Q  96 attagtcactttagtccctaaataggaaaaaagtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgt 180  Q
    ||||||||||||||||||| ||| ||||| |||| ||||||||||||||||||||   | ||||||||||| | ||| |||||||    
T  72190 attagtcactttagtccctgaatgggaaagaagtagtcactttagtccctgaatgtgcagaaattgcaaaacagtccctgaatgt 72106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 128 - 183
Target Start/End: Original strand, 71940 - 71995
Alignment:
Q  128 gtcgtcactttagtccctgaatgcagataaattgcaaaataatccatgaatgtaga 183  Q
    |||||||||||| |||||||||||||||||||||||||||| ||| ||||| ||||    
T  71940 gtcgtcactttaatccctgaatgcagataaattgcaaaatagtccctgaatataga 71995  T

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Target: scaffold0018; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 291 - 379
Target Start/End: Original strand, 72106 - 72196
Alignment:
Q  291 acattcaaagactgttttgcaatttctctgcattcagagattaaagtgactact--ttttccattaagggattaaagtgaataattctcct 379  Q
    |||||||  ||||||||||||||||||   ||||||| || |||||||||||||  ||| ||||| ||||| |||||||| ||||||||||    
T  72106 acattcagggactgttttgcaatttctgcacattcagggactaaagtgactacttctttcccattcagggactaaagtgactaattctcct 72196  T

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Target: scaffold0018; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 300 - 340
Target Start/End: Complemental strand, 71983 - 71943
Alignment:
Q  300 gactgttttgcaatttctctgcattcagagattaaagtgac 340  Q
    |||| ||||||||||| ||||||||||| ||||||||||||    
T  71983 gactattttgcaatttatctgcattcagggattaaagtgac 71943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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