View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20202_high_15 (Length: 268)
Name: NF20202_high_15
Description: NF20202
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20202_high_15 |
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Alignment Details
Target: chr8 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 18 - 249
Target Start/End: Original strand, 34572401 - 34572636
Alignment:
| Q |
18 |
accacaatgtgctcatagactttaaattcaaaacatatgattaaagtgcttaaaccaaatctagatcaagtgaatagacattttaattagcccttaaagt |
117 |
Q |
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| T |
34572401 |
accacaatgtgctcatagactttaaattcaaaacatatgattaaagtgcttaaaccaaatctagatcaagtgaatagacattttaattagcccttaaagt |
34572500 |
T |
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| Q |
118 |
aagcgtttaagttcatcttcaaatttacaaaataggaacttaataccttaattgaaaagaag----aaaaagcaattaattcattccttcaatcaaagtg |
213 |
Q |
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| T |
34572501 |
aagcg-ttaagttcatcttcaaatttacgaaataggaacttaataccttaattgaaaagaagaaaaaaaaagcaattaattcattccttcaatcaaagtg |
34572599 |
T |
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| Q |
214 |
tattttaaactaaa-ttttgtcatcacaaacaatgcc |
249 |
Q |
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|||||||||||||| |||||||||||||||||||||| |
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| T |
34572600 |
tattttaaactaaatttttgtcatcacaaacaatgcc |
34572636 |
T |
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