View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20203_low_5 (Length: 385)

Name: NF20203_low_5
Description: NF20203
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20203_low_5
NF20203_low_5
[»] chr7 (32 HSPs)
chr7 (239-325)||(6023301-6023387)
chr7 (186-235)||(9384044-9384093)
chr7 (241-326)||(7670425-7670510)
chr7 (10-62)||(9380129-9380181)
chr7 (239-324)||(10025987-10026072)
chr7 (239-324)||(19416507-19416592)
chr7 (239-323)||(43139259-43139343)
chr7 (272-324)||(47342670-47342722)
chr7 (273-323)||(580943-580993)
chr7 (239-325)||(7388022-7388108)
chr7 (258-324)||(48103676-48103742)
chr7 (241-326)||(19626510-19626595)
chr7 (239-324)||(20455129-20455214)
chr7 (258-323)||(35224112-35224177)
chr7 (241-326)||(46737776-46737861)
chr7 (324-368)||(9384012-9384056)
chr7 (255-327)||(39926537-39926609)
chr7 (257-324)||(4905269-4905336)
chr7 (272-323)||(35103490-35103541)
chr7 (239-321)||(36121647-36121730)
chr7 (257-323)||(10244721-10244787)
chr7 (274-324)||(35142167-35142217)
chr7 (257-323)||(40808160-40808226)
chr7 (272-317)||(1311818-1311863)
chr7 (239-320)||(5458054-5458135)
chr7 (274-323)||(18378396-18378445)
chr7 (279-324)||(24226004-24226049)
chr7 (281-326)||(38728199-38728244)
chr7 (282-326)||(12172456-12172500)
chr7 (257-325)||(20576411-20576479)
chr7 (239-323)||(47342417-47342501)
chr7 (257-325)||(47677578-47677646)
[»] chr4 (40 HSPs)
chr4 (237-323)||(9946421-9946507)
chr4 (239-324)||(35021450-35021535)
chr4 (257-323)||(39171371-39171437)
chr4 (257-323)||(43374273-43374339)
chr4 (241-326)||(14202464-14202549)
chr4 (239-323)||(37725704-37725788)
chr4 (258-324)||(16584951-16585017)
chr4 (239-324)||(10303494-10303579)
chr4 (239-324)||(27408568-27408652)
chr4 (240-312)||(10148184-10148256)
chr4 (272-324)||(12698590-12698642)
chr4 (272-324)||(16431609-16431661)
chr4 (239-323)||(54857598-54857682)
chr4 (272-324)||(56564999-56565051)
chr4 (271-322)||(12502302-12502353)
chr4 (262-317)||(42756112-42756167)
chr4 (272-323)||(54859725-54859776)
chr4 (254-324)||(7230273-7230343)
chr4 (257-311)||(22040656-22040710)
chr4 (283-329)||(47328184-47328230)
chr4 (283-329)||(47342980-47343026)
chr4 (272-325)||(241400-241453)
chr4 (272-325)||(2186349-2186402)
chr4 (239-324)||(7030877-7030961)
chr4 (239-324)||(11949746-11949831)
chr4 (279-316)||(30026233-30026270)
chr4 (239-320)||(33413313-33413394)
chr4 (278-323)||(36059022-36059067)
chr4 (241-326)||(37081219-37081304)
chr4 (272-325)||(52270046-52270099)
chr4 (283-323)||(4916149-4916189)
chr4 (239-319)||(5924647-5924727)
chr4 (272-324)||(8020663-8020715)
chr4 (279-323)||(9539216-9539260)
chr4 (272-324)||(16740392-16740444)
chr4 (239-323)||(20799377-20799461)
chr4 (237-325)||(28435229-28435317)
chr4 (272-320)||(31352109-31352157)
chr4 (272-324)||(36203229-36203281)
chr4 (272-328)||(48226514-48226570)
[»] chr8 (24 HSPs)
chr8 (239-324)||(41324107-41324192)
chr8 (239-297)||(22504273-22504331)
chr8 (239-319)||(8461819-8461899)
chr8 (241-325)||(24023400-24023484)
chr8 (254-327)||(8717473-8717546)
chr8 (257-330)||(24429786-24429859)
chr8 (283-327)||(6038302-6038346)
chr8 (272-323)||(6314339-6314390)
chr8 (283-326)||(8837911-8837954)
chr8 (237-324)||(24838151-24838238)
chr8 (272-323)||(27718910-27718961)
chr8 (239-324)||(42051566-42051651)
chr8 (234-323)||(13357419-13357508)
chr8 (239-324)||(14598181-14598265)
chr8 (239-324)||(27750887-27750972)
chr8 (283-324)||(37570780-37570821)
chr8 (274-326)||(18638091-18638143)
chr8 (239-323)||(19163519-19163603)
chr8 (239-323)||(25136827-25136911)
chr8 (272-324)||(29499764-29499816)
chr8 (257-317)||(32051533-32051593)
chr8 (272-324)||(33743568-33743620)
chr8 (272-324)||(38763531-38763583)
chr8 (272-324)||(39433403-39433455)
[»] chr2 (32 HSPs)
chr2 (240-329)||(13528984-13529072)
chr2 (257-323)||(44526122-44526188)
chr2 (239-324)||(42791288-42791373)
chr2 (272-324)||(4509530-4509582)
chr2 (257-324)||(44694681-44694748)
chr2 (272-325)||(7302157-7302210)
chr2 (272-325)||(33063978-33064031)
chr2 (241-325)||(11551160-11551244)
chr2 (274-326)||(22571883-22571935)
chr2 (256-312)||(36359319-36359375)
chr2 (239-322)||(19967413-19967496)
chr2 (240-323)||(30243244-30243327)
chr2 (279-321)||(10109669-10109711)
chr2 (257-323)||(17328007-17328073)
chr2 (241-326)||(346109-346194)
chr2 (279-324)||(3752798-3752843)
chr2 (257-294)||(4833261-4833298)
chr2 (239-324)||(22709078-22709163)
chr2 (266-319)||(24305315-24305368)
chr2 (272-325)||(27244649-27244702)
chr2 (239-324)||(28874535-28874620)
chr2 (241-326)||(29599930-29600015)
chr2 (254-323)||(30089043-30089112)
chr2 (254-323)||(30125647-30125716)
chr2 (239-324)||(31837919-31838004)
chr2 (239-291)||(4180723-4180775)
chr2 (257-325)||(5028848-5028916)
chr2 (239-323)||(24592829-24592913)
chr2 (272-320)||(25598578-25598626)
chr2 (279-327)||(40874095-40874143)
chr2 (284-324)||(41763906-41763946)
chr2 (236-324)||(43424652-43424740)
[»] chr5 (26 HSPs)
chr5 (239-323)||(34191427-34191511)
chr5 (239-326)||(35270664-35270751)
chr5 (239-324)||(1808576-1808661)
chr5 (241-326)||(2839789-2839874)
chr5 (239-324)||(22522784-22522869)
chr5 (239-324)||(24408488-24408573)
chr5 (239-324)||(22555224-22555309)
chr5 (241-326)||(34987136-34987221)
chr5 (247-320)||(39610332-39610405)
chr5 (257-325)||(11637573-11637641)
chr5 (272-324)||(28207125-28207177)
chr5 (239-323)||(29695009-29695093)
chr5 (272-319)||(20688038-20688085)
chr5 (272-323)||(32858664-32858715)
chr5 (257-324)||(38495135-38495202)
chr5 (272-323)||(42613220-42613271)
chr5 (238-324)||(8543569-8543655)
chr5 (239-321)||(39980504-39980586)
chr5 (257-323)||(40715950-40716016)
chr5 (250-323)||(10359591-10359664)
chr5 (258-323)||(10704333-10704398)
chr5 (257-326)||(40837904-40837973)
chr5 (272-328)||(17708063-17708119)
chr5 (239-295)||(32234784-32234839)
chr5 (272-324)||(37932323-37932375)
chr5 (239-295)||(41630095-41630151)
[»] chr1 (33 HSPs)
chr1 (239-323)||(44860866-44860950)
chr1 (239-311)||(17917121-17917193)
chr1 (257-324)||(13590103-13590170)
chr1 (273-324)||(13673538-13673589)
chr1 (257-324)||(45190270-45190337)
chr1 (272-322)||(50040351-50040401)
chr1 (239-312)||(23203327-23203400)
chr1 (254-323)||(26755610-26755679)
chr1 (241-326)||(41769800-41769885)
chr1 (256-324)||(20481093-20481161)
chr1 (240-324)||(47417776-47417860)
chr1 (239-323)||(48100716-48100800)
chr1 (241-324)||(7732415-7732498)
chr1 (272-323)||(16826348-16826399)
chr1 (272-323)||(23334582-23334633)
chr1 (240-323)||(27533237-27533320)
chr1 (240-322)||(2613717-2613799)
chr1 (257-323)||(26803452-26803518)
chr1 (272-326)||(42045388-42045442)
chr1 (239-324)||(1794589-1794674)
chr1 (239-316)||(18335802-18335879)
chr1 (254-323)||(29739331-29739400)
chr1 (257-326)||(41763156-41763225)
chr1 (257-322)||(47340782-47340847)
chr1 (272-320)||(3509957-3510005)
chr1 (239-323)||(8269351-8269435)
chr1 (236-322)||(8551406-8551493)
chr1 (272-324)||(11462938-11462990)
chr1 (239-291)||(13778587-13778639)
chr1 (239-323)||(17139500-17139584)
chr1 (239-323)||(18166596-18166680)
chr1 (239-311)||(34521173-34521245)
chr1 (259-323)||(44641521-44641585)
[»] scaffold0021 (1 HSPs)
scaffold0021 (239-326)||(161132-161219)
[»] chr6 (18 HSPs)
chr6 (239-320)||(30579856-30579937)
chr6 (272-324)||(17935722-17935774)
chr6 (279-322)||(5172115-5172158)
chr6 (257-330)||(12735244-12735317)
chr6 (274-326)||(3358382-3358434)
chr6 (257-324)||(29740475-29740542)
chr6 (258-325)||(32053780-32053847)
chr6 (239-325)||(9367393-9367479)
chr6 (241-319)||(20847497-20847574)
chr6 (272-326)||(21296749-21296803)
chr6 (254-324)||(33824874-33824944)
chr6 (239-324)||(8393735-8393819)
chr6 (239-296)||(8629679-8629736)
chr6 (283-324)||(9677228-9677269)
chr6 (272-325)||(26320579-26320632)
chr6 (239-323)||(331869-331953)
chr6 (279-323)||(4494894-4494938)
chr6 (272-324)||(12333584-12333636)
[»] chr3 (34 HSPs)
chr3 (272-329)||(20370297-20370354)
chr3 (239-323)||(29631180-29631264)
chr3 (272-324)||(32843278-32843330)
chr3 (241-324)||(986938-987021)
chr3 (239-322)||(25340907-25340990)
chr3 (257-323)||(17507700-17507766)
chr3 (241-323)||(48531272-48531353)
chr3 (257-323)||(48796219-48796285)
chr3 (272-325)||(21506774-21506827)
chr3 (272-324)||(4216415-4216467)
chr3 (239-311)||(7202899-7202971)
chr3 (272-324)||(44579629-44579681)
chr3 (239-322)||(11508466-11508549)
chr3 (272-323)||(53162192-53162243)
chr3 (239-325)||(15881082-15881168)
chr3 (266-324)||(21331427-21331485)
chr3 (241-326)||(4332652-4332737)
chr3 (239-324)||(7738662-7738747)
chr3 (257-326)||(8127454-8127523)
chr3 (247-324)||(9598432-9598509)
chr3 (239-320)||(20612260-20612341)
chr3 (241-326)||(21628873-21628958)
chr3 (239-324)||(32629073-32629158)
chr3 (239-312)||(38034792-38034865)
chr3 (257-326)||(39481132-39481201)
chr3 (257-310)||(39779031-39779084)
chr3 (241-326)||(42372511-42372596)
chr3 (262-311)||(51505879-51505928)
chr3 (272-324)||(10498711-10498763)
chr3 (239-291)||(16873812-16873864)
chr3 (239-323)||(28244087-28244171)
chr3 (272-324)||(33745092-33745144)
chr3 (8-104)||(42030441-42030537)
chr3 (254-294)||(42886507-42886547)
[»] scaffold0006 (2 HSPs)
scaffold0006 (273-324)||(171152-171203)
scaffold0006 (283-324)||(208935-208976)
[»] scaffold0011 (1 HSPs)
scaffold0011 (239-324)||(185256-185341)
[»] scaffold0350 (1 HSPs)
scaffold0350 (283-327)||(1238-1282)
[»] scaffold0157 (1 HSPs)
scaffold0157 (271-322)||(18124-18175)
[»] scaffold0024 (1 HSPs)
scaffold0024 (257-324)||(104785-104852)
[»] scaffold0045 (2 HSPs)
scaffold0045 (282-320)||(63471-63509)
scaffold0045 (282-320)||(70803-70841)
[»] scaffold1149 (1 HSPs)
scaffold1149 (255-324)||(2325-2394)
[»] scaffold0012 (1 HSPs)
scaffold0012 (279-324)||(118812-118857)


Alignment Details
Target: chr7 (Bit Score: 47; Significance: 1e-17; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 239 - 325
Target Start/End: Complemental strand, 6023387 - 6023301
Alignment:
Q  239 ttttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggacat 325  Q
    ||||||||| ||| ||| |||||||| ||||| |||||| ||||||| |||||||||||| |||| |||||||| ||||||||||||    
T  6023387 ttttttggtggtggtcggggtttgaaccccgaaccttgcatattttaagcattgtccaaaccaactgagctaagctcacgaggacat 6023301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 9384093 - 9384044
Alignment:
Q  186 aacatatgagcgttaaaaatgataaaattgatactatatatgtccaatac 235  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  9384093 aacatatgagcgttaaaaatgataaaattgatactatatatgcccaatac 9384044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 241 - 326
Target Start/End: Complemental strand, 7670510 - 7670425
Alignment:
Q  241 ttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggacata 326  Q
    ||||||||||| |||||||||||| ||||  |||||| ||| ||||||||||| |||| |||| |||||||| |||||| ||||||    
T  7670510 ttttggtagtggtcgaggtttgaaccccggaccttgcatatattatgcattgttcaaaccaactgagctaagctcacgaagacata 7670425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 9380129 - 9380181
Alignment:
Q  10 attactccatgttttgtagtagaagttaaactttgagggattttacatggatt 62  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||| ||||    
T  9380129 attactccatgttttgtactagaagctaaactttgagggattttacatagatt 9380181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 324
Target Start/End: Complemental strand, 10026072 - 10025987
Alignment:
Q  239 ttttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggaca 324  Q
    ||||||||| ||| ||| |||||||| |||   |||||| |||||||||||||||||||| |||| ||| |||| |||||||||||    
T  10026072 ttttttggtggtggtcggggtttgaaccccataccttgcatattttatgcattgtccaaaccaactgagttaagctcacgaggaca 10025987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 324
Target Start/End: Complemental strand, 19416592 - 19416507
Alignment:
Q  239 ttttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggaca 324  Q
    ||||||||| |||  || |||||||| ||||  |||||| |||||||||||||||||| | |||| |||||||| |||||||||||    
T  19416592 ttttttggtggtggccggggtttgaaccccggaccttgcatattttatgcattgtccataccaactgagctaagctcacgaggaca 19416507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 239 - 323
Target Start/End: Complemental strand, 43139343 - 43139259
Alignment:
Q  239 ttttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggac 323  Q
    ||||||||||||| ||| |||||||| ||||  |||||| |||||||||||| |||  ||||||  |||||||| ||||||||||    
T  43139343 ttttttggtagtggtcggggtttgaaccccgtaccttgcatattttatgcatagtctcaatcaagtgagctaagctcacgaggac 43139259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 272 - 324
Target Start/End: Complemental strand, 47342722 - 47342670
Alignment:
Q  272 ccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggaca 324  Q
    |||||| |||||||||||||||||| | |||| ||||||||||||||||||||    
T  47342722 ccttgcatattttatgcattgtccataccaactgagctaagttcacgaggaca 47342670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 273 - 323
Target Start/End: Original strand, 580943 - 580993
Alignment:
Q  273 cttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggac 323  Q
    ||||| |||||||||||||||||| | ||||||||||||| ||||||||||    
T  580943 cttgcatattttatgcattgtccataccaaccgagctaagctcacgaggac 580993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 325
Target Start/End: Original strand, 7388022 - 7388108
Alignment:
Q  239 ttttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggacat 325  Q
    |||||| || ||| ||| |||||||||||||| |||| | ||| ||||||||||||| || |||| ||| |||| ||||||||||||    
T  7388022 tttttttgtggtggtcggggtttgaatcccgaaccttacatatattatgcattgtcccaaccaactgagttaagctcacgaggacat 7388108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 324
Target Start/End: Original strand, 48103676 - 48103742
Alignment:
Q  258 gtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggaca 324  Q
    ||||||| ||||| |||||| ||||||||||||||||| || |||| ||| |||| |||||||||||    
T  48103676 gtttgaaccccgaaccttgcatattttatgcattgtcccaaccaactgagttaagctcacgaggaca 48103742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 241 - 326
Target Start/End: Original strand, 19626510 - 19626595
Alignment:
Q  241 ttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggacata 326  Q
    |||||||||||  ||  ||||||| ||||  |||||| ||| |||||||||||||||| |||| ||| |||| |||||||||||||    
T  19626510 ttttggtagtggccggtgtttgaaccccggaccttgcatatattatgcattgtccaaaccaactgagttaagctcacgaggacata 19626595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 239 - 324
Target Start/End: Complemental strand, 20455214 - 20455129
Alignment:
Q  239 ttttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggaca 324  Q
    |||||||||||||  || ||||||||||| || |||||  ||| |||||||||||| ||| |||| || ||||| |||||||||||    
T  20455214 ttttttggtagtgtccggggtttgaatcctgaaccttgaatatattatgcattgtctaaaccaactgaactaagctcacgaggaca 20455129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 323
Target Start/End: Complemental strand, 35224177 - 35224112
Alignment:
Q  258 gtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggac 323  Q
    ||||||| ||||  |||||| ||||||||||||||||| || |||| || ||||||||||||||||    
T  35224177 gtttgaaacccggaccttgcatattttatgcattgtcccaaccaactgaactaagttcacgaggac 35224112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 241 - 326
Target Start/End: Complemental strand, 46737861 - 46737776
Alignment:
Q  241 ttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggacata 326  Q
    |||||||||||  ||  ||||||| ||||  |||||| ||| ||||||||||||||||  ||| |||||||| |||||||||||||    
T  46737861 ttttggtagtggccggtgtttgaaccccggaccttgcatatattatgcattgtccaaacaaactgagctaagctcacgaggacata 46737776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 324 - 368
Target Start/End: Complemental strand, 9384056 - 9384012
Alignment:
Q  324 atatgtccaatacatttatacatataagcattttgacgtgtatgt 368  Q
    ||||| ||||||| ||||||||||||||||||||||| |||||||    
T  9384056 atatgcccaatacgtttatacatataagcattttgacatgtatgt 9384012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 327
Target Start/End: Original strand, 39926537 - 39926609
Alignment:
Q  255 gaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggacatat 327  Q
    |||||||||| ||||| | |||| ||| |||||||||||||  |||||| |||||||| |||||| |||||||    
T  39926537 gaggtttgaaccccgaacattgcatatattatgcattgtccttatcaactgagctaagctcacgatgacatat 39926609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 257 - 324
Target Start/End: Complemental strand, 4905336 - 4905269
Alignment:
Q  257 ggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggaca 324  Q
    ||||||||  |||| |||||| |||||||||||||||||| | |||| ||| |||| |||||||||||    
T  4905336 ggtttgaactccgaaccttgcatattttatgcattgtccacaacaactgagttaagctcacgaggaca 4905269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 272 - 323
Target Start/End: Complemental strand, 35103541 - 35103490
Alignment:
Q  272 ccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggac 323  Q
    |||||| ||||||||||||||||| || |||| |||||||| ||||||||||    
T  35103541 ccttgcatattttatgcattgtcccaaccaactgagctaagctcacgaggac 35103490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 239 - 321
Target Start/End: Complemental strand, 36121730 - 36121647
Alignment:
Q  239 ttttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcat-tgtccaaatcaaccgagctaagttcacgagg 321  Q
    |||||||||||||  || |||||||| ||||  |||||| |||||||||||| ||||| || |||||||||| || ||||||||    
T  36121730 ttttttggtagtggccggggtttgaaccccggaccttgcatattttatgcatatgtcccaaccaaccgagctcagctcacgagg 36121647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 323
Target Start/End: Complemental strand, 10244787 - 10244721
Alignment:
Q  257 ggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggac 323  Q
    |||||||| ||||  |||||| ||| |||||||||||||| | |||| |||||||| ||||||||||    
T  10244787 ggtttgaaccccggaccttgcatatattatgcattgtccataccaactgagctaagctcacgaggac 10244721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 324
Target Start/End: Original strand, 35142167 - 35142217
Alignment:
Q  274 ttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggaca 324  Q
    |||| ||| |||||||||||||| |||||| |||||||| |||||||||||    
T  35142167 ttgcatatattatgcattgtccatatcaactgagctaagctcacgaggaca 35142217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 323
Target Start/End: Original strand, 40808160 - 40808226
Alignment:
Q  257 ggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggac 323  Q
    |||||||| ||||  |||||| ||||||||||| |||||||| |||| ||| |||| ||||||||||    
T  40808160 ggtttgaaccccggaccttgcatattttatgcactgtccaaaccaactgagttaagctcacgaggac 40808226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 317
Target Start/End: Original strand, 1311818 - 1311863
Alignment:
Q  272 ccttgcgtattttatgcattgtccaaatcaaccgagctaagttcac 317  Q
    |||||| |||||||||||||||||| |||||| |||| ||||||||    
T  1311818 ccttgcatattttatgcattgtccatatcaactgagcaaagttcac 1311863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 320
Target Start/End: Original strand, 5458054 - 5458135
Alignment:
Q  239 ttttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgag 320  Q
    |||||| || ||| ||||||||||||||||   |||||| ||| ||||||||||| |  |||||| |||||||| |||||||    
T  5458054 tttttttgtggtgttcgaggtttgaatcccagaccttgcatatattatgcattgttcttatcaactgagctaagctcacgag 5458135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 323
Target Start/End: Complemental strand, 18378445 - 18378396
Alignment:
Q  274 ttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggac 323  Q
    |||| ||||||||||||||||| || |||| |||||||| ||||||||||    
T  18378445 ttgcatattttatgcattgtcccaaccaactgagctaagctcacgaggac 18378396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 324
Target Start/End: Original strand, 24226004 - 24226049
Alignment:
Q  279 tattttatgcattgtccaaatcaaccgagctaagttcacgaggaca 324  Q
    |||||||||||||||||| |  ||| ||||||||||||||||||||    
T  24226004 tattttatgcattgtccatacgaactgagctaagttcacgaggaca 24226049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 326
Target Start/End: Complemental strand, 38728244 - 38728199
Alignment:
Q  281 ttttatgcattgtccaaatcaaccgagctaagttcacgaggacata 326  Q
    |||||||||||||||| | |||| |||||||| |||||||||||||    
T  38728244 ttttatgcattgtccataccaactgagctaagctcacgaggacata 38728199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 326
Target Start/End: Complemental strand, 12172500 - 12172456
Alignment:
Q  282 tttatgcattgtccaaatcaaccgagctaagttcacgaggacata 326  Q
    |||||||||||| || |||||||||| ||||||||||| ||||||    
T  12172500 tttatgcattgttcatatcaaccgagttaagttcacgaagacata 12172456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 325
Target Start/End: Original strand, 20576411 - 20576479
Alignment:
Q  257 ggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggacat 325  Q
    ||||||||||||   |||||| |||||||| |||||||| || || | |||||||| ||||||||||||    
T  20576411 ggtttgaatcccagaccttgcatattttatacattgtcccaaccagctgagctaagctcacgaggacat 20576479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 323
Target Start/End: Original strand, 47342417 - 47342501
Alignment:
Q  239 ttttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggac 323  Q
    ||||||||||||| |||  |||||||  |||  |||||| ||| |||||||||||||||| |||| ||| |||| ||| ||||||    
T  47342417 ttttttggtagtggtcggagtttgaactccggaccttgcatatattatgcattgtccaaaccaactgagttaagctcatgaggac 47342501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 325
Target Start/End: Original strand, 47677578 - 47677646
Alignment:
Q  257 ggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggacat 325  Q
    |||||||| ||||| | |||| ||||||||||||||| | || |||| |||||||  ||||||||||||    
T  47677578 ggtttgaaccccgaacattgcatattttatgcattgttctaaccaactgagctaaactcacgaggacat 47677646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 237 - 323
Target Start/End: Complemental strand, 9946507 - 9946421
Alignment:
Q  237 tcttttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggac 323  Q
    ||||||||||| ||| ||| |||||||| ||||  |||||| |||||||||||||||||| | |||| |||||||| ||||||||||    
T  9946507 tcttttttggtggtggtcggggtttgaaccccggaccttgcatattttatgcattgtccataccaactgagctaagctcacgaggac 9946421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 239 - 324
Target Start/End: Original strand, 35021450 - 35021535
Alignment:
Q  239 ttttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggaca 324  Q
    |||||| |||||| ||| |||| ||| ||||| |||||| ||||||||| |||||||| |||||| |||||||| |||||||||||    
T  35021450 tttttttgtagtggtcggggttcgaaccccgaaccttgcatattttatgtattgtccatatcaactgagctaagctcacgaggaca 35021535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 257 - 323
Target Start/End: Original strand, 39171371 - 39171437
Alignment:
Q  257 ggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggac 323  Q
    |||||||| || || |||||| |||||||||||||||||| |||||| |||||||| ||||||||||    
T  39171371 ggtttgaaccctgaaccttgcatattttatgcattgtccatatcaactgagctaagctcacgaggac 39171437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 257 - 323
Target Start/End: Original strand, 43374273 - 43374339
Alignment:
Q  257 ggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggac 323  Q
    ||||||||  |||| |||||| |||||||||||||||||| |||||| |||||||| ||||||||||    
T  43374273 ggtttgaactccgaaccttgcatattttatgcattgtccatatcaactgagctaagctcacgaggac 43374339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 241 - 326
Target Start/End: Original strand, 14202464 - 14202549
Alignment:
Q  241 ttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggacata 326  Q
    ||||||||||| ||| |||||||| ||||  |||| | ||| ||||||||| ||||||||||| ||| |||| |||||||||||||    
T  14202464 ttttggtagtggtcggggtttgaaccccggaccttacatatattatgcattatccaaatcaactgagttaagctcacgaggacata 14202549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 239 - 323
Target Start/End: Original strand, 37725704 - 37725788
Alignment:
Q  239 ttttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggac 323  Q
    ||||||||||||| ||| ||||| || ||||| |||||| |||||||| |||||||| ||  ||| |||||||| ||||||||||    
T  37725704 ttttttggtagtggtcggggtttaaaccccgaaccttgcatattttatacattgtcccaacaaactgagctaagctcacgaggac 37725788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 324
Target Start/End: Original strand, 16584951 - 16585017
Alignment:
Q  258 gtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggaca 324  Q
    |||||||  |||| |||||| |||||||||||||||||| |||||  ||||||||| ||||||||||    
T  16584951 gtttgaactccgaaccttgcatattttatgcattgtccatatcaattgagctaagtccacgaggaca 16585017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 239 - 324
Target Start/End: Original strand, 10303494 - 10303579
Alignment:
Q  239 ttttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggaca 324  Q
    |||||||||||||  ||||||| ||| ||||   ||||| |||||||||||||||||  | |||| |||||||| |||||||||||    
T  10303494 ttttttggtagtggccgaggttcgaaccccggatcttgcatattttatgcattgtccttaccaactgagctaagctcacgaggaca 10303579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 239 - 324
Target Start/End: Original strand, 27408568 - 27408652
Alignment:
Q  239 ttttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggaca 324  Q
    |||||||||| ||||||||||||||| ||||| |||| | ||||||||||||| |   || ||||  |||||||||||||||||||    
T  27408568 ttttttggtattgatcgaggtttgaaccccga-ccttacatattttatgcattatttcaaccaactaagctaagttcacgaggaca 27408652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 312
Target Start/End: Complemental strand, 10148256 - 10148184
Alignment:
Q  240 tttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaag 312  Q
    ||||||||||||  |||||||||||  | || |||||| ||| ||||||||||||||||||||| ||| ||||    
T  10148256 tttttggtagtggccgaggtttgaactctgaaccttgcatatattatgcattgtccaaatcaactgaggtaag 10148184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 324
Target Start/End: Complemental strand, 12698642 - 12698590
Alignment:
Q  272 ccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggaca 324  Q
    |||||| ||| ||||||||||||||||||||| |||||||| |||||| ||||    
T  12698642 ccttgcatatattatgcattgtccaaatcaactgagctaagctcacgaagaca 12698590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 324
Target Start/End: Complemental strand, 16431661 - 16431609
Alignment:
Q  272 ccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggaca 324  Q
    |||||| |||||||||||||||||| | |||| ||||||||||||||| ||||    
T  16431661 ccttgcatattttatgcattgtccataccaactgagctaagttcacgatgaca 16431609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 323
Target Start/End: Original strand, 54857598 - 54857682
Alignment:
Q  239 ttttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggac 323  Q
    ||||||||| |||  || |||||||| ||||  |||||| |||||||||||||||  | | ||||||||||||| ||||||||||    
T  54857598 ttttttggtggtggccggggtttgaaccccggaccttgcatattttatgcattgtttataccaaccgagctaagctcacgaggac 54857682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 324
Target Start/End: Original strand, 56564999 - 56565051
Alignment:
Q  272 ccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggaca 324  Q
    |||||| |||||||||||||||||| |||||  |||||||| |||||||||||    
T  56564999 ccttgcatattttatgcattgtccatatcaattgagctaagctcacgaggaca 56565051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 271 - 322
Target Start/End: Original strand, 12502302 - 12502353
Alignment:
Q  271 tccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgagga 322  Q
    ||||||| |||||| |||||||||||||||||| |||||||| | |||||||    
T  12502302 tccttgcatattttctgcattgtccaaatcaactgagctaagctgacgagga 12502353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 262 - 317
Target Start/End: Original strand, 42756112 - 42756167
Alignment:
Q  262 gaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcac 317  Q
    ||||||||| |||||| ||| |||||||||||||  |||||| |||||||||||||    
T  42756112 gaatcccgaaccttgcatatattatgcattgtccttatcaactgagctaagttcac 42756167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 272 - 323
Target Start/End: Original strand, 54859725 - 54859776
Alignment:
Q  272 ccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggac 323  Q
    |||||| ||| ||||||||||| |||| ||||||||||||| ||||||||||    
T  54859725 ccttgcatatattatgcattgttcaaaccaaccgagctaagctcacgaggac 54859776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 324
Target Start/End: Complemental strand, 7230343 - 7230273
Alignment:
Q  254 cgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggaca 324  Q
    ||||||||||| ||||  |||||| ||| |||||||||||||  | |||| |||||||| |||||||||||    
T  7230343 cgaggtttgaaccccggaccttgcatatattatgcattgtccttaccaactgagctaagctcacgaggaca 7230273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 311
Target Start/End: Complemental strand, 22040710 - 22040656
Alignment:
Q  257 ggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaa 311  Q
    |||||||| ||||| |||||| ||| |||||||||||||| |||||| |||||||    
T  22040710 ggtttgaaccccgaaccttgcatatattatgcattgtccatatcaactgagctaa 22040656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 283 - 329
Target Start/End: Complemental strand, 47328230 - 47328184
Alignment:
Q  283 ttatgcattgtccaaatcaaccgagctaagttcacgaggacatatgt 329  Q
    |||||||||||||  |||||| || ||||||||||||||||||||||    
T  47328230 ttatgcattgtccctatcaactgaactaagttcacgaggacatatgt 47328184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 283 - 329
Target Start/End: Complemental strand, 47343026 - 47342980
Alignment:
Q  283 ttatgcattgtccaaatcaaccgagctaagttcacgaggacatatgt 329  Q
    |||||||||||||  |||||| || ||||||||||||||||||||||    
T  47343026 ttatgcattgtccctatcaactgaactaagttcacgaggacatatgt 47342980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 325
Target Start/End: Original strand, 241400 - 241453
Alignment:
Q  272 ccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggacat 325  Q
    |||||| ||||||||||||||| || | ||||||||||||| | ||||||||||    
T  241400 ccttgcatattttatgcattgttcataccaaccgagctaagcttacgaggacat 241453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 325
Target Start/End: Original strand, 2186349 - 2186402
Alignment:
Q  272 ccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggacat 325  Q
    |||||| ||| |||||||||||||| | |||| |||||||| ||||||||||||    
T  2186349 ccttgcatatattatgcattgtccataccaactgagctaagctcacgaggacat 2186402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 324
Target Start/End: Original strand, 7030877 - 7030961
Alignment:
Q  239 ttttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggaca 324  Q
    |||||| ||||||  ||||||| |||||| || |||||| |||||||||||||||| | | |||| ||| |||| |||||||||||    
T  7030877 tttttttgtagtggccgaggttcgaatccgga-ccttgcatattttatgcattgtctataccaactgagttaagctcacgaggaca 7030961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 324
Target Start/End: Original strand, 11949746 - 11949831
Alignment:
Q  239 ttttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggaca 324  Q
    |||||| || ||| ||| |||||||| ||||  |||||| ||| |||||||||||||| | |||| |||||||| ||| |||||||    
T  11949746 tttttttgtggtggtcggggtttgaaccccggaccttgcatatattatgcattgtccataccaactgagctaagctcatgaggaca 11949831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 316
Target Start/End: Original strand, 30026233 - 30026270
Alignment:
Q  279 tattttatgcattgtccaaatcaaccgagctaagttca 316  Q
    ||||||||||||||||||||||||| ||| ||||||||    
T  30026233 tattttatgcattgtccaaatcaactgagttaagttca 30026270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 320
Target Start/End: Original strand, 33413313 - 33413394
Alignment:
Q  239 ttttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgag 320  Q
    |||||| || |||||||||||||||||| ||  | |||  ||| |||||||||||||  |||||| ||||||| ||||||||    
T  33413313 tttttttgtggtgatcgaggtttgaatctcggacattgaatatattatgcattgtccttatcaactgagctaaattcacgag 33413394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 323
Target Start/End: Complemental strand, 36059067 - 36059022
Alignment:
Q  278 gtattttatgcattgtccaaatcaaccgagctaagttcacgaggac 323  Q
    |||||||||||||||| || | |||| |||||||||||||||||||    
T  36059067 gtattttatgcattgttcataccaactgagctaagttcacgaggac 36059022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 326
Target Start/End: Original strand, 37081219 - 37081304
Alignment:
Q  241 ttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggacata 326  Q
    ||||||||||| |||  ||||||| | ||  |||||  ||| ||||| ||| |||||| ||||||||||||| |||||||||||||    
T  37081219 ttttggtagtggtcggagtttgaacctcggaccttggatatattatgtattttccaaaccaaccgagctaagctcacgaggacata 37081304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 325
Target Start/End: Original strand, 52270046 - 52270099
Alignment:
Q  272 ccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggacat 325  Q
    |||||| ||| |||||||||||||| | |||| |||||||| ||||||||||||    
T  52270046 ccttgcatatattatgcattgtccataccaactgagctaagctcacgaggacat 52270099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 323
Target Start/End: Complemental strand, 4916189 - 4916149
Alignment:
Q  283 ttatgcattgtccaaatcaaccgagctaagttcacgaggac 323  Q
    ||||||||||| |||| |||| |||||||||||||||||||    
T  4916189 ttatgcattgttcaaaccaactgagctaagttcacgaggac 4916149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 319
Target Start/End: Complemental strand, 5924727 - 5924647
Alignment:
Q  239 ttttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacga 319  Q
    ||||||||| ||| |||||||||||| ||||  |||| | ||| ||||| |||||||| | |||| |||||||| ||||||    
T  5924727 ttttttggtggtggtcgaggtttgaaccccggaccttccatatattatgtattgtccatagcaactgagctaagctcacga 5924647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 324
Target Start/End: Original strand, 8020663 - 8020715
Alignment:
Q  272 ccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggaca 324  Q
    |||||| ||| |||||||||||||||| |||| |||||| | |||||||||||    
T  8020663 ccttgcatatattatgcattgtccaaaccaactgagctatgctcacgaggaca 8020715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 323
Target Start/End: Original strand, 9539216 - 9539260
Alignment:
Q  279 tattttatgcattgtccaaatcaaccgagctaagttcacgaggac 323  Q
    |||||||||||||||||| | |||| |||||||| ||||||||||    
T  9539216 tattttatgcattgtccataacaactgagctaagctcacgaggac 9539260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 324
Target Start/End: Complemental strand, 16740444 - 16740392
Alignment:
Q  272 ccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggaca 324  Q
    |||||| ||||||||||||||||  || ||||  |||||||||||||||||||    
T  16740444 ccttgcatattttatgcattgtctcaaccaactaagctaagttcacgaggaca 16740392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 323
Target Start/End: Original strand, 20799377 - 20799461
Alignment:
Q  239 ttttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggac 323  Q
    ||||||||| |||| |  |||||||| ||||  |||||| ||| |||||||||||||  | |||| |||||||| ||||||||||    
T  20799377 ttttttggtggtgaccagggtttgaaccccggaccttgcatatattatgcattgtccctaccaactgagctaagctcacgaggac 20799461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 237 - 325
Target Start/End: Original strand, 28435229 - 28435317
Alignment:
Q  237 tcttttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggacat 325  Q
    ||||||||||| |||   | |||||||| ||||| |||||| ||| |||||||||||||| | |||| |||||||  |||| |||||||    
T  28435229 tcttttttggtggtggctggggtttgaaccccgaaccttgcatatattatgcattgtccataccaactgagctaaactcacaaggacat 28435317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 320
Target Start/End: Complemental strand, 31352157 - 31352109
Alignment:
Q  272 ccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgag 320  Q
    |||||| |||||||||||||||||| | ||||  |||||||||||||||    
T  31352157 ccttgcatattttatgcattgtccataccaacttagctaagttcacgag 31352109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 324
Target Start/End: Complemental strand, 36203281 - 36203229
Alignment:
Q  272 ccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggaca 324  Q
    |||||| ||| |||||||||||||  |||||| |||||||| |||||||||||    
T  36203281 ccttgcatatattatgcattgtccttatcaactgagctaagctcacgaggaca 36203229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 328
Target Start/End: Original strand, 48226514 - 48226570
Alignment:
Q  272 ccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggacatatg 328  Q
    |||||| |||||||||||||||||| | |||  |||||||||||||| |||| ||||    
T  48226514 ccttgcatattttatgcattgtccataccaattgagctaagttcacgtggacctatg 48226570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 239 - 324
Target Start/End: Complemental strand, 41324192 - 41324107
Alignment:
Q  239 ttttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggaca 324  Q
    |||||||||||||| || | |||||| | ||| |||||| |||||||||||||||||||| ||| ||| ||||| |||||||||||    
T  41324192 ttttttggtagtgaccgggatttgaacctcgaaccttgcatattttatgcattgtccaaaccaatcgaactaagctcacgaggaca 41324107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 22504273 - 22504331
Alignment:
Q  239 ttttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaa 297  Q
    |||||||||||||||||  ||||||| ||||| |||||| |||||||||||||||||||    
T  22504273 ttttttggtagtgatcggagtttgaaccccgaaccttgcatattttatgcattgtccaa 22504331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 239 - 319
Target Start/End: Original strand, 8461819 - 8461899
Alignment:
Q  239 ttttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacga 319  Q
    ||||||||||||| ||| ||||||||  |||  |||||| ||||||||||||||||| || |||| |||||||| ||||||    
T  8461819 ttttttggtagtggtcggggtttgaactccggaccttgcatattttatgcattgtcccaaccaactgagctaagctcacga 8461899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 241 - 325
Target Start/End: Original strand, 24023400 - 24023484
Alignment:
Q  241 ttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggacat 325  Q
    ||||||||||| ||| |||||||| ||||  |||||| ||||||||||||||| | ||  ||| |||||||| ||||||||||||    
T  24023400 ttttggtagtggtcggggtttgaaccccggaccttgcatattttatgcattgttccaactaactgagctaagctcacgaggacat 24023484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 254 - 327
Target Start/End: Original strand, 8717473 - 8717546
Alignment:
Q  254 cgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggacatat 327  Q
    ||||||||||| ||||| |||||| ||| |||||||||||||| | |||| |||||||  ||||||||| ||||    
T  8717473 cgaggtttgaaccccgaaccttgcatatattatgcattgtccataccaactgagctaaactcacgaggatatat 8717546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 257 - 330
Target Start/End: Complemental strand, 24429859 - 24429786
Alignment:
Q  257 ggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggacatatgtc 330  Q
    |||| ||| ||||| |||| | |||||||||||||||||| |||||  |||||||||| ||||||||| |||||    
T  24429859 ggttcgaaccccgaaccttacatattttatgcattgtccatatcaagtgagctaagtttacgaggacaaatgtc 24429786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 327
Target Start/End: Original strand, 6038302 - 6038346
Alignment:
Q  283 ttatgcattgtccaaatcaaccgagctaagttcacgaggacatat 327  Q
    |||||||||||||| |||||| ||||||||||||||| |||||||    
T  6038302 ttatgcattgtccatatcaactgagctaagttcacgaagacatat 6038346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 272 - 323
Target Start/End: Original strand, 6314339 - 6314390
Alignment:
Q  272 ccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggac 323  Q
    |||||| |||||||||||||||||  |||||| |||||||| ||||||||||    
T  6314339 ccttgcatattttatgcattgtccttatcaactgagctaagctcacgaggac 6314390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 283 - 326
Target Start/End: Complemental strand, 8837954 - 8837911
Alignment:
Q  283 ttatgcattgtccaaatcaaccgagctaagttcacgaggacata 326  Q
    |||||||||||||  |||||||||| ||||||||||||||||||    
T  8837954 ttatgcattgtccctatcaaccgagttaagttcacgaggacata 8837911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 237 - 324
Target Start/End: Original strand, 24838151 - 24838238
Alignment:
Q  237 tcttttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggaca 324  Q
    ||||||||||| |||  || |||||||| ||||  |||||| ||||||||||||||||| || |||| |||||| | |||| ||||||    
T  24838151 tcttttttggtggtggccggggtttgaaccccggaccttgcatattttatgcattgtcctaaccaactgagctatgctcacaaggaca 24838238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 272 - 323
Target Start/End: Original strand, 27718910 - 27718961
Alignment:
Q  272 ccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggac 323  Q
    |||||| ||| |||||||||||||| |||||| |||||||| ||||||||||    
T  27718910 ccttgcatatattatgcattgtccatatcaactgagctaagctcacgaggac 27718961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 324
Target Start/End: Complemental strand, 42051651 - 42051566
Alignment:
Q  239 ttttttggtagtgatcgaggtttgaatcccgatccttgcgtatttt-atgcattgtccaaatcaaccgagctaagttcacgaggaca 324  Q
    ||||||||| ||| ||| ||||||||||| || |||||| |||||| || | ||||||||| |||| |||||||| |||||||||||    
T  42051651 ttttttggtggtggtcggggtttgaatcc-gaaccttgcatatttttattcgttgtccaaaccaactgagctaagctcacgaggaca 42051566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 323
Target Start/End: Original strand, 13357419 - 13357508
Alignment:
Q  234 acatcttttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggac 323  Q
    |||| ||||||||| |||  ||||||||||| | ||  |||||| ||| |||||||||||||| | |||| ||| |||| ||||||||||    
T  13357419 acatattttttggtggtggccgaggtttgaacctcgtaccttgcatatattatgcattgtccataccaactgagttaagctcacgaggac 13357508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 324
Target Start/End: Original strand, 14598181 - 14598265
Alignment:
Q  239 ttttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggaca 324  Q
    |||||| || ||| ||| |||||||| ||||  |||||| ||| |||||||||||||||| ||| | ||||||| |||||||||||    
T  14598181 tttttttgtggtggtcggggtttgaaccccgcaccttgcttatattatgcattgtccaaaccaa-ctagctaagctcacgaggaca 14598265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 324
Target Start/End: Original strand, 27750887 - 27750972
Alignment:
Q  239 ttttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggaca 324  Q
    |||||| |||||| |||||||| ||| ||||  |||||| ||| ||||||| |||||  | |||| |||||||| |||||||||||    
T  27750887 tttttttgtagtgttcgaggttcgaaccccggaccttgcatatattatgcactgtccttaccaactgagctaagctcacgaggaca 27750972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 324
Target Start/End: Original strand, 37570780 - 37570821
Alignment:
Q  283 ttatgcattgtccaaatcaaccgagctaagttcacgaggaca 324  Q
    ||||| |||||||| | |||||||||||||||||||||||||    
T  37570780 ttatgtattgtccataccaaccgagctaagttcacgaggaca 37570821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 274 - 326
Target Start/End: Complemental strand, 18638143 - 18638091
Alignment:
Q  274 ttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggacata 326  Q
    |||| ||||||||||||||| | || |||| ||||||||||||| ||||||||    
T  18638143 ttgcatattttatgcattgttccaaccaactgagctaagttcactaggacata 18638091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 323
Target Start/End: Original strand, 19163519 - 19163603
Alignment:
Q  239 ttttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggac 323  Q
    |||||| || ||| ||| |||||||| ||||  |||||| ||  |||||||||||||| | |||| |||||||| ||||||||||    
T  19163519 tttttttgtggtggtcggggtttgaaccccggaccttgcataaattatgcattgtccataccaactgagctaagctcacgaggac 19163603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 323
Target Start/End: Original strand, 25136827 - 25136911
Alignment:
Q  239 ttttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggac 323  Q
    ||||||||| |||  ||||||||||| | ||  |||||| |||||||||| ||||||| | |||| |||||| | ||||||||||    
T  25136827 ttttttggtggtggccgaggtttgaacctcggaccttgcatattttatgccttgtccataccaactgagctatgctcacgaggac 25136911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 324
Target Start/End: Complemental strand, 29499816 - 29499764
Alignment:
Q  272 ccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggaca 324  Q
    |||||| |||||||||||||||||| | |||  |||||||| |||||||||||    
T  29499816 ccttgcatattttatgcattgtccataccaattgagctaagctcacgaggaca 29499764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 317
Target Start/End: Original strand, 32051533 - 32051593
Alignment:
Q  257 ggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcac 317  Q
    |||||||| ||||  |||||| ||| |||||||||||||||| |||| |||||||| ||||    
T  32051533 ggtttgaaccccggaccttgcatatattatgcattgtccaaaccaactgagctaagctcac 32051593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 324
Target Start/End: Complemental strand, 33743620 - 33743568
Alignment:
Q  272 ccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggaca 324  Q
    |||||| |||||||||||||||||  | |||| |||||| |||||||||||||    
T  33743620 ccttgcatattttatgcattgtcctcaccaactgagctatgttcacgaggaca 33743568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 324
Target Start/End: Original strand, 38763531 - 38763583
Alignment:
Q  272 ccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggaca 324  Q
    |||||| ||| |||||||||||||||| |||| |||||| | |||||||||||    
T  38763531 ccttgcatatattatgcattgtccaaaccaactgagctatgctcacgaggaca 38763583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 324
Target Start/End: Complemental strand, 39433455 - 39433403
Alignment:
Q  272 ccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggaca 324  Q
    |||||| ||||||||| ||||| || |||||| |||||||| |||||||||||    
T  39433455 ccttgcatattttatgtattgttcatatcaactgagctaagctcacgaggaca 39433403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 240 - 329
Target Start/End: Complemental strand, 13529072 - 13528984
Alignment:
Q  240 tttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggacatatgt 329  Q
    |||||||||||| |||||||||||| ||||| |||||| ||||||||||||| ||| ||||||| |||||||  | ||||||||| ||||    
T  13529072 tttttggtagtggtcgaggtttgaaccccga-ccttgcatattttatgcattatcctaatcaactgagctaaccttacgaggacaaatgt 13528984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 257 - 323
Target Start/End: Complemental strand, 44526188 - 44526122
Alignment:
Q  257 ggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggac 323  Q
    |||||||||||||  |||||||||| |||||||||||||| | |||| |||||||| ||||||||||    
T  44526188 ggtttgaatcccggaccttgcgtatattatgcattgtccataccaactgagctaagctcacgaggac 44526122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 324
Target Start/End: Complemental strand, 42791373 - 42791288
Alignment:
Q  239 ttttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggaca 324  Q
    |||||||||||||  || |||||||| ||||  |||||| ||| ||||||||||||||| ||||  |||||||| |||||||||||    
T  42791373 ttttttggtagtggccggggtttgaaccccggaccttgcatatattatgcattgtccaagtcaagtgagctaagctcacgaggaca 42791288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 272 - 324
Target Start/End: Complemental strand, 4509582 - 4509530
Alignment:
Q  272 ccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggaca 324  Q
    |||||| ||| |||||||||||||| ||||||||||||||||| |||||||||    
T  4509582 ccttgcatatattatgcattgtccatatcaaccgagctaagttgacgaggaca 4509530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 257 - 324
Target Start/End: Complemental strand, 44694748 - 44694681
Alignment:
Q  257 ggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggaca 324  Q
    |||||||| ||||| |||||| ||| |||||||||||| | |||||| ||| ||||||||||||||||    
T  44694748 ggtttgaaccccgagccttgcatatattatgcattgtctatatcaactgagttaagttcacgaggaca 44694681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 272 - 325
Target Start/End: Original strand, 7302157 - 7302210
Alignment:
Q  272 ccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggacat 325  Q
    |||||| |||||||||||||||||  |||||| |||||||||||||||| ||||    
T  7302157 ccttgcatattttatgcattgtccctatcaactgagctaagttcacgagaacat 7302210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 272 - 325
Target Start/End: Complemental strand, 33064031 - 33063978
Alignment:
Q  272 ccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggacat 325  Q
    |||||| ||| |||||||||||||| |||||| |||||||| ||||||||||||    
T  33064031 ccttgcatatattatgcattgtccatatcaactgagctaagctcacgaggacat 33063978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 325
Target Start/End: Complemental strand, 11551244 - 11551160
Alignment:
Q  241 ttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggacat 325  Q
    |||||||||||  ||  ||||||| |||||  ||||| |||||||||||||||| ||||||||  ||||||| |||| |||||||    
T  11551244 ttttggtagtggccggagtttgaaccccgaatcttgcatattttatgcattgtcgaaatcaactaagctaagctcacaaggacat 11551160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 274 - 326
Target Start/End: Original strand, 22571883 - 22571935
Alignment:
Q  274 ttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggacata 326  Q
    |||| ||| |||||||||||| | |||||| ||||||||||||||||||||||    
T  22571883 ttgcatatattatgcattgtctatatcaactgagctaagttcacgaggacata 22571935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 312
Target Start/End: Complemental strand, 36359375 - 36359319
Alignment:
Q  256 aggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaag 312  Q
    ||||||||| ||||  |||||| ||| ||||||||||||||||||||||||| ||||    
T  36359375 aggtttgaaccccggaccttgcatatattatgcattgtccaaatcaaccgagttaag 36359319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 239 - 322
Target Start/End: Complemental strand, 19967496 - 19967413
Alignment:
Q  239 ttttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgagga 322  Q
    ||||| ||| ||| ||||||||||||  |||| ||||||  || ||||||||||| || |||||| |||||||| |||||||||    
T  19967496 tttttgggtggtggtcgaggtttgaactccgaaccttgcacatattatgcattgttcatatcaactgagctaagctcacgagga 19967413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 240 - 323
Target Start/End: Complemental strand, 30243327 - 30243244
Alignment:
Q  240 tttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggac 323  Q
    |||||||| |||  ||||||||||| ||||| |||||  ||| ||||||||||||   | |||| |||||||||||||||||||    
T  30243327 tttttggtggtggccgaggtttgaaccccgaaccttgtatatattatgcattgtctctaccaactgagctaagttcacgaggac 30243244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 321
Target Start/End: Original strand, 10109669 - 10109711
Alignment:
Q  279 tattttatgcattgtccaaatcaaccgagctaagttcacgagg 321  Q
    |||||||||||||||||||| |||| |||||||| ||||||||    
T  10109669 tattttatgcattgtccaaaccaactgagctaagctcacgagg 10109711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 323
Target Start/End: Original strand, 17328007 - 17328073
Alignment:
Q  257 ggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggac 323  Q
    |||||||| ||||  |||||| ||||||||||||||||| || | || |||||||| ||||||||||    
T  17328007 ggtttgaaccccggaccttgcttattttatgcattgtcccaaccgactgagctaagctcacgaggac 17328073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 326
Target Start/End: Original strand, 346109 - 346194
Alignment:
Q  241 ttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggacata 326  Q
    ||||||||||| ||| |||||||| || |  |||| | ||| ||||||||| | |||| |||| |||||||| |||||||||||||    
T  346109 ttttggtagtggtcggggtttgaaccctggaccttacatatattatgcattattcaaaccaactgagctaagctcacgaggacata 346194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 324
Target Start/End: Original strand, 3752798 - 3752843
Alignment:
Q  279 tattttatgcattgtccaaatcaaccgagctaagttcacgaggaca 324  Q
    ||||||||||||||| || | ||||||||||||| |||||||||||    
T  3752798 tattttatgcattgttcataacaaccgagctaagctcacgaggaca 3752843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 294
Target Start/End: Complemental strand, 4833298 - 4833261
Alignment:
Q  257 ggtttgaatcccgatccttgcgtattttatgcattgtc 294  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  4833298 ggtttgaaccccgatccttgcatattttatgcattgtc 4833261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 324
Target Start/End: Complemental strand, 22709163 - 22709078
Alignment:
Q  239 ttttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggaca 324  Q
    ||||| |||||||  || |||||||| ||||  |||||| ||||||||||||||||  || ||||  ||||||||| |||||||||    
T  22709163 tttttgggtagtggccggggtttgaaccccggaccttgcatattttatgcattgtctcaaccaactaagctaagtttacgaggaca 22709078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 319
Target Start/End: Original strand, 24305315 - 24305368
Alignment:
Q  266 cccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacga 319  Q
    ||||| |||||| |||||||||||||||||| || ||| |||||||| ||||||    
T  24305315 cccgaaccttgcatattttatgcattgtccatattaactgagctaagctcacga 24305368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 325
Target Start/End: Complemental strand, 27244702 - 27244649
Alignment:
Q  272 ccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggacat 325  Q
    |||||| ||| |||||||||||||  |||||| |||||||| ||||||||||||    
T  27244702 ccttgcatatattatgcattgtccctatcaactgagctaagctcacgaggacat 27244649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 324
Target Start/End: Original strand, 28874535 - 28874620
Alignment:
Q  239 ttttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggaca 324  Q
    ||||||||||||| ||| | |||||| ||||| |||||| |||||||| |||| ||| || |||| ||| ||||  ||||||||||    
T  28874535 ttttttggtagtggtcgggatttgaaccccgaaccttgcatattttatacattatcccaaccaactgagttaagcccacgaggaca 28874620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 326
Target Start/End: Complemental strand, 29600015 - 29599930
Alignment:
Q  241 ttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggacata 326  Q
    ||||||||||| |||  ||||||| ||||  |||||  ||| ||||||||| |||||| |||| |||||||| ||||||| |||||    
T  29600015 ttttggtagtggtcggagtttgaaccccggaccttggatatattatgcattatccaaaccaactgagctaagctcacgagaacata 29599930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 323
Target Start/End: Complemental strand, 30089112 - 30089043
Alignment:
Q  254 cgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggac 323  Q
    ||||||||||| ||||  |||||  ||| |||||||||||||  | |||| |||||||||||||||||||    
T  30089112 cgaggtttgaaccccggaccttgtatatattatgcattgtccctaccaactgagctaagttcacgaggac 30089043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 323
Target Start/End: Complemental strand, 30125716 - 30125647
Alignment:
Q  254 cgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggac 323  Q
    ||||||||||| ||||  |||||  ||| |||||||||||||  | |||| |||||||||||||||||||    
T  30125716 cgaggtttgaaccccggaccttgtatatattatgcattgtccctaccaactgagctaagttcacgaggac 30125647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 324
Target Start/End: Original strand, 31837919 - 31838004
Alignment:
Q  239 ttttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggaca 324  Q
    |||||| || ||| |||||||||||||||||| |||| | ||| |||| |||| |||| | |||  ||| ||||||||||||||||    
T  31837919 tttttttgtggtggtcgaggtttgaatcccgaaccttacatatattatacattatccataccaattgagttaagttcacgaggaca 31838004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 291
Target Start/End: Complemental strand, 4180775 - 4180723
Alignment:
Q  239 ttttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcatt 291  Q
    ||||||||||||| ||| |||||||| ||||  |||||| |||||||||||||    
T  4180775 ttttttggtagtggtcggggtttgaaccccggaccttgcatattttatgcatt 4180723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 325
Target Start/End: Complemental strand, 5028916 - 5028848
Alignment:
Q  257 ggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggacat 325  Q
    |||||||| ||| | |||| | ||| ||||||||||||| ||||||| |||||||| |||| |||||||    
T  5028916 ggtttgaaccccaaaccttacatatattatgcattgtcctaatcaactgagctaagctcaccaggacat 5028848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 323
Target Start/End: Original strand, 24592829 - 24592913
Alignment:
Q  239 ttttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggac 323  Q
    ||||||||| |||  || |||||||| |||   |||||| ||| |||||||||||||  | |||| |||||||||||||||||||    
T  24592829 ttttttggtggtggccggggtttgaaccccagaccttgcatatattatgcattgtccctaccaactgagctaagttcacgaggac 24592913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 320
Target Start/End: Original strand, 25598578 - 25598626
Alignment:
Q  272 ccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgag 320  Q
    |||||| ||| |||||||||||||| | |||| ||||||||||||||||    
T  25598578 ccttgcatatattatgcattgtccataccaactgagctaagttcacgag 25598626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 327
Target Start/End: Original strand, 40874095 - 40874143
Alignment:
Q  279 tattttatgcattgtccaaatcaaccgagctaagttcacgaggacatat 327  Q
    |||||||||||||||||| |||||| ||| ||| ||||||| |||||||    
T  40874095 tattttatgcattgtccatatcaactgagttaaattcacgatgacatat 40874143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 324
Target Start/End: Original strand, 41763906 - 41763946
Alignment:
Q  284 tatgcattgtccaaatcaaccgagctaagttcacgaggaca 324  Q
    ||||||||||||| | |||| ||||||||||||||||||||    
T  41763906 tatgcattgtccataccaactgagctaagttcacgaggaca 41763946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 324
Target Start/End: Complemental strand, 43424740 - 43424652
Alignment:
Q  236 atcttttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggaca 324  Q
    ||||||||||  |||| | | ||||||||  |||| | |||| ||||||||||||||| | ||||||| |||||||| ||| |||||||    
T  43424740 atcttttttgacagtggttggggtttgaactccgaactttgcatattttatgcattgttccaatcaactgagctaagctcatgaggaca 43424652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 239 - 323
Target Start/End: Complemental strand, 34191511 - 34191427
Alignment:
Q  239 ttttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggac 323  Q
    |||||||||||||  || |||||||| ||||  |||||| ||||||||||||||||| || |||| |||||||| ||||||||||    
T  34191511 ttttttggtagtggccggggtttgaaccccggaccttgcatattttatgcattgtcccaaccaactgagctaagctcacgaggac 34191427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 326
Target Start/End: Original strand, 35270664 - 35270751
Alignment:
Q  239 ttttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggacata 326  Q
    ||||||||||||||   ||||||||| || |  |||||| ||||||||||||||||| || |||| |||||||| |||||||||||||    
T  35270664 ttttttggtagtgactaaggtttgaaccctggaccttgcatattttatgcattgtcccaaccaactgagctaagctcacgaggacata 35270751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 324
Target Start/End: Original strand, 1808576 - 1808661
Alignment:
Q  239 ttttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggaca 324  Q
    ||||||||| ||| ||| || | |||| |||| |||||| ||||||||||||| |||| | |||| ||||||||||||||||||||    
T  1808576 ttttttggtggtggtcggggatcgaattccgaaccttgcatattttatgcattatccataccaactgagctaagttcacgaggaca 1808661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 241 - 326
Target Start/End: Complemental strand, 2839874 - 2839789
Alignment:
Q  241 ttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggacata 326  Q
    ||||||||||| |||  ||||||| ||||| |||||  ||| ||||||||| |||||| |||| |||||||| |||||||||||||    
T  2839874 ttttggtagtggtcggagtttgaaccccgaaccttggatatattatgcattatccaaaccaactgagctaagctcacgaggacata 2839789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 324
Target Start/End: Original strand, 22522784 - 22522869
Alignment:
Q  239 ttttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggaca 324  Q
    ||||||||| |||  || |||||||| ||||  |||||| ||| |||||||||||||| | ||||||||||||| |||||||||||    
T  22522784 ttttttggtggtggccggggtttgaaccccggaccttgcatatattatgcattgtccataccaaccgagctaagctcacgaggaca 22522869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 324
Target Start/End: Complemental strand, 24408573 - 24408488
Alignment:
Q  239 ttttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggaca 324  Q
    ||||||||||||| ||| |||||||| |||   |||||| ||| |||||||| ||||||| |||| |||||||| |||||||||||    
T  24408573 ttttttggtagtggtcggggtttgaaccccagaccttgcatatattatgcatcgtccaaaccaactgagctaagctcacgaggaca 24408488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 239 - 324
Target Start/End: Complemental strand, 22555309 - 22555224
Alignment:
Q  239 ttttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggaca 324  Q
    ||||||||| ||| ||| ||||||| |||||  |||||| |||| ||||||||||||| | |||| ||| |||| |||||||||||    
T  22555309 ttttttggtggtggtcggggtttgattcccggaccttgcatattatatgcattgtccataccaactgagttaagctcacgaggaca 22555224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 241 - 326
Target Start/End: Original strand, 34987136 - 34987221
Alignment:
Q  241 ttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggacata 326  Q
    ||||||||||| |||   |||||| ||||| |||||  ||| ||||||||| |||| | |||| ||||||||||||||||||||||    
T  34987136 ttttggtagtggtcggaatttgaaccccgaaccttggatatattatgcattatccacaccaactgagctaagttcacgaggacata 34987221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 320
Target Start/End: Original strand, 39610332 - 39610405
Alignment:
Q  247 tagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgag 320  Q
    ||||||||||||||||||  || | | |||| ||| |||||||||||||| |||||| |||||||| |||||||    
T  39610332 tagtgatcgaggtttgaactccaaacattgcatatattatgcattgtccatatcaactgagctaagctcacgag 39610405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 325
Target Start/End: Original strand, 11637573 - 11637641
Alignment:
Q  257 ggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggacat 325  Q
    |||| ||| ||||| |||||| |||||||||||||||||| | |||| ||| |||| ||||||||||||    
T  11637573 ggttcgaaccccgaaccttgcatattttatgcattgtccataccaactgagttaagctcacgaggacat 11637641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 324
Target Start/End: Complemental strand, 28207177 - 28207125
Alignment:
Q  272 ccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggaca 324  Q
    |||||| |||||||||||||||||| | |||| |||||||| |||||||||||    
T  28207177 ccttgcatattttatgcattgtccataccaactgagctaagctcacgaggaca 28207125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 323
Target Start/End: Complemental strand, 29695093 - 29695009
Alignment:
Q  239 ttttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggac 323  Q
    ||||||||| ||| ||| |||||||| | ||| |||| | ||| |||||||||||||| |||||| ||| |||| ||||||||||    
T  29695093 ttttttggtggtggtcggggtttgaaccacgaaccttacatatattatgcattgtccatatcaactgagttaaggtcacgaggac 29695009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 272 - 319
Target Start/End: Complemental strand, 20688085 - 20688038
Alignment:
Q  272 ccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacga 319  Q
    |||||| ||| |||||||||||||||| |||| |||||||||||||||    
T  20688085 ccttgcatatattatgcattgtccaaaccaactgagctaagttcacga 20688038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 272 - 323
Target Start/End: Complemental strand, 32858715 - 32858664
Alignment:
Q  272 ccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggac 323  Q
    |||||| |||||||||||||||||| | |||| |||||||| ||||||||||    
T  32858715 ccttgcatattttatgcattgtccataccaacggagctaagctcacgaggac 32858664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 257 - 324
Target Start/End: Complemental strand, 38495202 - 38495135
Alignment:
Q  257 ggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggaca 324  Q
    |||||||| ||||| |||||| ||||||||||||| |||| | |||| ||| ||||||||| ||||||    
T  38495202 ggtttgaaccccgaaccttgcatattttatgcattatccataccaactgagttaagttcacaaggaca 38495135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 272 - 323
Target Start/End: Original strand, 42613220 - 42613271
Alignment:
Q  272 ccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggac 323  Q
    |||||| ||||||||||||||||||||||||  || ||||| ||||||||||    
T  42613220 ccttgcatattttatgcattgtccaaatcaattgaactaagctcacgaggac 42613271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 324
Target Start/End: Complemental strand, 8543655 - 8543569
Alignment:
Q  238 cttttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggaca 324  Q
    |||||||  ||||||||| ||||||||   ||  |||| | |||||||||||||||||||| |||| ||| |||| |||||||||||    
T  8543655 ctttttttttagtgatcggggtttgaactacggacctttcatattttatgcattgtccaaaccaactgagttaagctcacgaggaca 8543569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 321
Target Start/End: Complemental strand, 39980586 - 39980504
Alignment:
Q  239 ttttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgagg 321  Q
    ||||||||| ||| ||| ||||||||  |||  |||||| ||||||||||||| |||| | |||| |||||||| ||||||||    
T  39980586 ttttttggtggtggtcggggtttgaactccggaccttgcatattttatgcattatccataccaactgagctaagctcacgagg 39980504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 323
Target Start/End: Original strand, 40715950 - 40716016
Alignment:
Q  257 ggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggac 323  Q
    |||||||| ||||  |||||| ||| |||||||||||||| |||||  |||||||| ||||||||||    
T  40715950 ggtttgaaccccggaccttgcatatattatgcattgtccatatcaattgagctaagctcacgaggac 40716016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 323
Target Start/End: Original strand, 10359591 - 10359664
Alignment:
Q  250 tgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggac 323  Q
    ||||||| ||||||| | ||| |||||  ||||| ||||||||| || | |||| |||||||||||||||||||    
T  10359591 tgatcgatgtttgaacctcgaaccttgaatatttaatgcattgttcataccaactgagctaagttcacgaggac 10359664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 323
Target Start/End: Original strand, 10704333 - 10704398
Alignment:
Q  258 gtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggac 323  Q
    ||||||| ||||  |||||| |||||||||||||||||| | |||| |||||||| |||| |||||    
T  10704333 gtttgaaccccggaccttgcatattttatgcattgtccataccaactgagctaagctcacaaggac 10704398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 326
Target Start/End: Original strand, 40837904 - 40837973
Alignment:
Q  257 ggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggacata 326  Q
    |||||||| ||||  |||||| ||||||||  |||||||| | |||| ||| ||||||||||||||||||    
T  40837904 ggtttgaaccccggaccttgcatattttatatattgtccataccaactgagttaagttcacgaggacata 40837973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 328
Target Start/End: Complemental strand, 17708119 - 17708063
Alignment:
Q  272 ccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggacatatg 328  Q
    |||||| |||||||||||||||||| |||||| ||| || | |||||||||| ||||    
T  17708119 ccttgcatattttatgcattgtccatatcaactgagttatgctcacgaggacgtatg 17708063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 295
Target Start/End: Complemental strand, 32234839 - 32234784
Alignment:
Q  239 ttttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtcc 295  Q
    ||||||||| ||| ||| |||||||| ||||| |||||| |||||||||||||||||    
T  32234839 ttttttggtggtggtcggggtttgaaccccga-ccttgcatattttatgcattgtcc 32234784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 324
Target Start/End: Complemental strand, 37932375 - 37932323
Alignment:
Q  272 ccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggaca 324  Q
    |||||| ||| |||||||||||||| | |||| |||||||| |||||||||||    
T  37932375 ccttgcatatattatgcattgtccataccaactgagctaagctcacgaggaca 37932323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 295
Target Start/End: Original strand, 41630095 - 41630151
Alignment:
Q  239 ttttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtcc 295  Q
    |||||| || |||| || |||||||||||||| |||||| ||| |||||||||||||    
T  41630095 tttttttgtggtgaccggggtttgaatcccgaaccttgcatatattatgcattgtcc 41630151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 239 - 323
Target Start/End: Original strand, 44860866 - 44860950
Alignment:
Q  239 ttttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggac 323  Q
    |||||||||||||  || |||||||| |||   |||||  |||||||||||||||||||| |||| |||||||||||||||||||    
T  44860866 ttttttggtagtggccggggtttgaaccccagaccttggatattttatgcattgtccaaaccaactgagctaagttcacgaggac 44860950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 239 - 311
Target Start/End: Original strand, 17917121 - 17917193
Alignment:
Q  239 ttttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaa 311  Q
    |||||| || ||| ||| |||||||||||||| |||| | |||||||||||||||||| |||||| |||||||    
T  17917121 tttttttgtggtggtcggggtttgaatcccgaaccttacatattttatgcattgtccatatcaactgagctaa 17917193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 257 - 324
Target Start/End: Complemental strand, 13590170 - 13590103
Alignment:
Q  257 ggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggaca 324  Q
    ||||||||  |||| |||| | |||||||||||||||||||| |||| |||||||| |||||||||||    
T  13590170 ggtttgaactccgaaccttacatattttatgcattgtccaaaccaactgagctaagctcacgaggaca 13590103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 273 - 324
Target Start/End: Complemental strand, 13673589 - 13673538
Alignment:
Q  273 cttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggaca 324  Q
    ||||| ||||||||||||||| |||| ||||||||||||| |||||||||||    
T  13673589 cttgcatattttatgcattgttcaaaccaaccgagctaagctcacgaggaca 13673538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 257 - 324
Target Start/End: Original strand, 45190270 - 45190337
Alignment:
Q  257 ggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggaca 324  Q
    |||||||||||||| |||||| ||| |||||||||||||| | |||| || |||||||||||| ||||    
T  45190270 ggtttgaatcccgaaccttgcatatattatgcattgtccataccaactgaactaagttcacgaagaca 45190337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 272 - 322
Target Start/End: Complemental strand, 50040401 - 50040351
Alignment:
Q  272 ccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgagga 322  Q
    |||||| ||||||||||||||||| || |||| ||||||||||||||||||    
T  50040401 ccttgcatattttatgcattgtcccaaccaactgagctaagttcacgagga 50040351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 239 - 312
Target Start/End: Complemental strand, 23203400 - 23203327
Alignment:
Q  239 ttttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaag 312  Q
    ||||| ||||||| ||| |||||||| ||||| |||||| ||||||||||||||| | || |||| ||||||||    
T  23203400 tttttgggtagtggtcggggtttgaaccccgaaccttgcatattttatgcattgttccaaccaactgagctaag 23203327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 254 - 323
Target Start/End: Complemental strand, 26755679 - 26755610
Alignment:
Q  254 cgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggac 323  Q
    ||||||||||| ||||  |||||| ||| | |||||||||||| |||||| |||||||| ||||||||||    
T  26755679 cgaggtttgaaccccggaccttgcatatataatgcattgtccatatcaactgagctaagctcacgaggac 26755610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 241 - 326
Target Start/End: Original strand, 41769800 - 41769885
Alignment:
Q  241 ttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggacata 326  Q
    ||||||||||| |||  ||||||| ||||  |||||  ||| ||||||||| |||||| |||| |||||||| |||||||||||||    
T  41769800 ttttggtagtggtcggagtttgaaccccggaccttggatatattatgcattatccaaaccaactgagctaagctcacgaggacata 41769885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 324
Target Start/End: Complemental strand, 20481161 - 20481093
Alignment:
Q  256 aggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggaca 324  Q
    |||||||||  |||| |||||| || |||||||||||| |||| |||| |||||||| |||||||||||    
T  20481161 aggtttgaactccgaaccttgcataatttatgcattgttcaaaccaactgagctaagctcacgaggaca 20481093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 324
Target Start/End: Complemental strand, 47417860 - 47417776
Alignment:
Q  240 tttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggaca 324  Q
    |||||||| |||| |||||||||||  |||| |||||| ||| ||||||||||||| || |||  ||| |||||||| |||||||    
T  47417860 tttttggtggtgaccgaggtttgaactccgaaccttgcatatattatgcattgtcctaaccaattgagttaagttcatgaggaca 47417776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 323
Target Start/End: Complemental strand, 48100800 - 48100716
Alignment:
Q  239 ttttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggac 323  Q
    ||||||| | ||| || ||||||||| ||| | |||||| |||||||||||||||||| | |||| |||||||| |||| |||||    
T  48100800 ttttttgatggtggtcaaggtttgaaccccaaaccttgcatattttatgcattgtccataccaactgagctaagctcacaaggac 48100716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 241 - 324
Target Start/End: Complemental strand, 7732498 - 7732415
Alignment:
Q  241 ttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggaca 324  Q
    ||||||||||| |||  ||||||||||||   ||||  ||| ||||||||| ||||||||||| |||||||  |||||||||||    
T  7732498 ttttggtagtggtcggagtttgaatcccggatcttggatatattatgcattatccaaatcaactgagctaaactcacgaggaca 7732415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 272 - 323
Target Start/End: Complemental strand, 16826399 - 16826348
Alignment:
Q  272 ccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggac 323  Q
    |||||| |||||||||||||||||| | |||| |||||||| ||||||||||    
T  16826399 ccttgcatattttatgcattgtccatagcaactgagctaagctcacgaggac 16826348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 272 - 323
Target Start/End: Complemental strand, 23334633 - 23334582
Alignment:
Q  272 ccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggac 323  Q
    |||||| ||||||||||||||||||||||| | ||| |||| ||||||||||    
T  23334633 ccttgcatattttatgcattgtccaaatcagctgagttaagctcacgaggac 23334582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 240 - 323
Target Start/End: Complemental strand, 27533320 - 27533237
Alignment:
Q  240 tttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggac 323  Q
    |||||||| ||| ||| |||||||| ||||| |||||| ||| |||||||||||||  | |||| || ||||| ||||||||||    
T  27533320 tttttggtggtggtcggggtttgaaccccgaaccttgcatatattatgcattgtccctaccaactgatctaagctcacgaggac 27533237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 322
Target Start/End: Complemental strand, 2613799 - 2613717
Alignment:
Q  240 tttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgagga 322  Q
    ||||| || ||| ||| |||| ||| ||||| |||| | |||||||||||||||||| | |||| |||||||| |||||||||    
T  2613799 ttttttgttgtggtcggggttcgaaccccgaaccttacatattttatgcattgtccataccaactgagctaagctcacgagga 2613717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 323
Target Start/End: Original strand, 26803452 - 26803518
Alignment:
Q  257 ggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggac 323  Q
    |||||||| ||||  | |||| ||| |||||||||||||| | |||| |||||||||||||||||||    
T  26803452 ggtttgaaccccggactttgcatatattatgcattgtccataccaactgagctaagttcacgaggac 26803518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 326
Target Start/End: Original strand, 42045388 - 42045442
Alignment:
Q  272 ccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggacata 326  Q
    |||||| ||| |||||||||||||| | |||| |||||||| |||||||||||||    
T  42045388 ccttgcatatattatgcattgtccataccaactgagctaagctcacgaggacata 42045442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 324
Target Start/End: Complemental strand, 1794674 - 1794589
Alignment:
Q  239 ttttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggaca 324  Q
    |||||| || ||| |||||||||||| ||||   ||||| ||| |||||||||||||| |  ||| |||||||| |||||||||||    
T  1794674 tttttttgtggtggtcgaggtttgaaccccggatcttgcatatattatgcattgtccatactaactgagctaagctcacgaggaca 1794589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 316
Target Start/End: Original strand, 18335802 - 18335879
Alignment:
Q  239 ttttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttca 316  Q
    |||||| ||| || |||||||||||| || || |||||| |||||||| |||||||| || || | ||||||||||||    
T  18335802 tttttttgtaatggtcgaggtttgaaccctgaaccttgcatattttatacattgtcctaaccagctgagctaagttca 18335879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 323
Target Start/End: Complemental strand, 29739400 - 29739331
Alignment:
Q  254 cgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggac 323  Q
    ||||||||||| ||||  |||||| |||||||||||||||||  | |||| |||||||| | ||||||||    
T  29739400 cgaggtttgaaccccggaccttgcatattttatgcattgtccttaccaactgagctaagctaacgaggac 29739331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 326
Target Start/End: Original strand, 41763156 - 41763225
Alignment:
Q  257 ggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggacata 326  Q
    |||||||| ||||  |||||| ||||||||||||| |||  | |||| |||||||| |||||||||||||    
T  41763156 ggtttgaaccccggaccttgcatattttatgcattatccctaccaactgagctaagctcacgaggacata 41763225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 322
Target Start/End: Complemental strand, 47340847 - 47340782
Alignment:
Q  257 ggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgagga 322  Q
    ||||||||||||||  ||| | ||||||||||||||||| || |||| |||||||| |||| ||||    
T  47340847 ggtttgaatcccgaatctttcatattttatgcattgtcccaaccaactgagctaagctcacaagga 47340782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 320
Target Start/End: Original strand, 3509957 - 3510005
Alignment:
Q  272 ccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgag 320  Q
    |||||| ||| |||||||||||||| | |||| ||||||||||||||||    
T  3509957 ccttgcatatattatgcattgtccataccaactgagctaagttcacgag 3510005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 323
Target Start/End: Original strand, 8269351 - 8269435
Alignment:
Q  239 ttttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggac 323  Q
    |||||| || ||| ||| |||||||| ||||  |||||| ||| ||||| |||||||  | |||| |||||||||||||||||||    
T  8269351 tttttttgtggtggtcggggtttgaaccccggaccttgcatatattatgtattgtccttaccaactgagctaagttcacgaggac 8269435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 322
Target Start/End: Original strand, 8551406 - 8551493
Alignment:
Q  236 atcttttttggtagtgatcgagg-tttgaatcccgatccttgcgtat-tttatgcattgtccaaatcaaccgagctaagttcacgagga 322  Q
    ||||||||||||||||  || || |||||| ||||  |||||| ||| |||||||||||||| ||||||| |||||||| |||||||||    
T  8551406 atcttttttggtagtggccggggatttgaaccccggaccttgcatatctttatgcattgtcc-aatcaactgagctaagctcacgagga 8551493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 324
Target Start/End: Original strand, 11462938 - 11462990
Alignment:
Q  272 ccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggaca 324  Q
    |||||| ||||||||||||||||   | ||||||| |||||||||||||||||    
T  11462938 ccttgcatattttatgcattgtctctagcaaccgaactaagttcacgaggaca 11462990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 291
Target Start/End: Complemental strand, 13778639 - 13778587
Alignment:
Q  239 ttttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcatt 291  Q
    |||||| || ||| |||||||||||| ||||| |||||| |||||||||||||    
T  13778639 tttttttgtggtggtcgaggtttgaaccccgaaccttgcatattttatgcatt 13778587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 323
Target Start/End: Original strand, 17139500 - 17139584
Alignment:
Q  239 ttttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggac 323  Q
    ||||||||| ||| ||| |||||||| ||||  |||||  ||| |||||||||||||  | |||| |||||||| ||||||||||    
T  17139500 ttttttggtggtggtcggggtttgaaccccggaccttgaatatattatgcattgtccctaccaactgagctaagctcacgaggac 17139584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 323
Target Start/End: Complemental strand, 18166680 - 18166596
Alignment:
Q  239 ttttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggac 323  Q
    ||||||||||||| ||| |||||||| ||||  | |||| ||| |||||||||||| | | |||| ||||||||  |||||||||    
T  18166680 ttttttggtagtggtcggggtttgaaccccggactttgcatatattatgcattgtctataccaactgagctaagcccacgaggac 18166596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 311
Target Start/End: Original strand, 34521173 - 34521245
Alignment:
Q  239 ttttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaa 311  Q
    ||||||||| |||  ||||||||||| ||||  |||||| ||| |||||||||||||| | |||| |||||||    
T  34521173 ttttttggtggtggccgaggtttgaaccccggaccttgcatatattatgcattgtccataccaactgagctaa 34521245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 323
Target Start/End: Complemental strand, 44641585 - 44641521
Alignment:
Q  259 tttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggac 323  Q
    |||||| ||||  |||||| ||| |||||||||||||| |||||| |||||||  ||||||||||    
T  44641585 tttgaaccccgggccttgcatatattatgcattgtccatatcaactgagctaaactcacgaggac 44641521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 326
Target Start/End: Complemental strand, 161219 - 161132
Alignment:
Q  239 ttttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggacata 326  Q
    ||||||||| ||| ||| |||||||| ||||| |||||| |||||||||||||||||| | |||| ||| |||| |||| ||||||||    
T  161219 ttttttggtggtggtcggggtttgaaccccgaaccttgcatattttatgcattgtccataccaactgagttaagctcacaaggacata 161132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000002; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 320
Target Start/End: Complemental strand, 30579937 - 30579856
Alignment:
Q  239 ttttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgag 320  Q
    |||||| ||||||  ||| ||||||| ||| | |||||| ||||||||||||||||| || |||| ||||||||||||||||    
T  30579937 tttttttgtagtggccgaagtttgaaccccaaaccttgcatattttatgcattgtcccaaccaactgagctaagttcacgag 30579856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 272 - 324
Target Start/End: Complemental strand, 17935774 - 17935722
Alignment:
Q  272 ccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggaca 324  Q
    |||||| |||||||||||||||||||| |||| ||||||||||||||| ||||    
T  17935774 ccttgcatattttatgcattgtccaaaccaactgagctaagttcacgatgaca 17935722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 279 - 322
Target Start/End: Complemental strand, 5172158 - 5172115
Alignment:
Q  279 tattttatgcattgtccaaatcaaccgagctaagttcacgagga 322  Q
    |||||||||||||||||| | |||||||||||||||||||||||    
T  5172158 tattttatgcattgtccataccaaccgagctaagttcacgagga 5172115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 257 - 330
Target Start/End: Original strand, 12735244 - 12735317
Alignment:
Q  257 ggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggacatatgtc 330  Q
    |||||||| ||| | |||||| ||||||||||||||||| || |||| ||| |||| ||||||||||| |||||    
T  12735244 ggtttgaaccccaaaccttgcatattttatgcattgtcccaaccaactgagttaagctcacgaggacaaatgtc 12735317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 274 - 326
Target Start/End: Complemental strand, 3358434 - 3358382
Alignment:
Q  274 ttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggacata 326  Q
    |||| ||| |||||||||||||||| |||| ||| ||||||||||||||||||    
T  3358434 ttgcatatattatgcattgtccaaaccaactgagttaagttcacgaggacata 3358382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 257 - 324
Target Start/End: Complemental strand, 29740542 - 29740475
Alignment:
Q  257 ggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggaca 324  Q
    |||||||| ||||  |||||||||| |||||||||||||| | |||  |||||||| |||||||||||    
T  29740542 ggtttgaaccccggaccttgcgtatattatgcattgtccataccaattgagctaagctcacgaggaca 29740475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 258 - 325
Target Start/End: Complemental strand, 32053847 - 32053780
Alignment:
Q  258 gtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggacat 325  Q
    ||||||| | ||| |||||| ||| |||||||||||||| | |||| |||||||| ||||||||||||    
T  32053847 gtttgaaccacgaaccttgcatatattatgcattgtccataccaactgagctaagctcacgaggacat 32053780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 325
Target Start/End: Complemental strand, 9367479 - 9367393
Alignment:
Q  239 ttttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggacat 325  Q
    |||||| || ||| ||| ||||||||||||   |||||| |||||||||||||||||||| |||   ||||||| ||||||| ||||    
T  9367479 tttttttgtggtggtcggggtttgaatcccagaccttgcatattttatgcattgtccaaaccaattcagctaagctcacgagaacat 9367393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 319
Target Start/End: Original strand, 20847497 - 20847574
Alignment:
Q  241 ttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacga 319  Q
    ||||||| ||| | |||||||||| || || |||||| ||||||||||||||||||||  ||| |||||||| ||||||    
T  20847497 ttttggtggtggttgaggtttgaacccgga-ccttgcatattttatgcattgtccaaactaactgagctaagctcacga 20847574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 326
Target Start/End: Complemental strand, 21296803 - 21296749
Alignment:
Q  272 ccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggacata 326  Q
    |||||| ||||||||||||||||| || |||| |||||||  |||||||||||||    
T  21296803 ccttgcatattttatgcattgtcccaaccaactgagctaaactcacgaggacata 21296749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 324
Target Start/End: Complemental strand, 33824944 - 33824874
Alignment:
Q  254 cgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggaca 324  Q
    ||||||||||| ||||  |||||| ||| |||||||||||||  |||||| |||||||| |||||| ||||    
T  33824944 cgaggtttgaaccccggaccttgcatatattatgcattgtccttatcaactgagctaagatcacgaagaca 33824874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 324
Target Start/End: Original strand, 8393735 - 8393819
Alignment:
Q  239 ttttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggaca 324  Q
    |||||||||||||  || |||||||| || |  |||||| ||||||||||||| ||| || |||||||| |||| |||||||||||    
T  8393735 ttttttggtagtggccggggtttgaaacctggaccttgcatattttatgcattatcc-aaccaaccgagttaagctcacgaggaca 8393819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 296
Target Start/End: Original strand, 8629679 - 8629736
Alignment:
Q  239 ttttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtcca 296  Q
    |||||| || ||| |||||||||||| ||||| |||||| ||| ||||||||||||||    
T  8629679 tttttttgtggtggtcgaggtttgaaccccgaaccttgcatatattatgcattgtcca 8629736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 324
Target Start/End: Complemental strand, 9677269 - 9677228
Alignment:
Q  283 ttatgcattgtccaaatcaaccgagctaagttcacgaggaca 324  Q
    |||||||||||||||| |||| |||||||| |||||||||||    
T  9677269 ttatgcattgtccaaaccaactgagctaagctcacgaggaca 9677228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 325
Target Start/End: Original strand, 26320579 - 26320632
Alignment:
Q  272 ccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggacat 325  Q
    |||||| |||||||||||||||||| | |||| |||||||| |||||| |||||    
T  26320579 ccttgcatattttatgcattgtccataccaactgagctaagctcacgatgacat 26320632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 323
Target Start/End: Original strand, 331869 - 331953
Alignment:
Q  239 ttttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggac 323  Q
    |||||| ||||||  ||||||||||||||| | |||||| ||| ||||||||||||   | |||| ||| |||| ||||||||||    
T  331869 tttttttgtagtggccgaggtttgaatcccaaaccttgcatatattatgcattgtctctaccaactgagttaagctcacgaggac 331953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 323
Target Start/End: Original strand, 4494894 - 4494938
Alignment:
Q  279 tattttatgcattgtccaaatcaaccgagctaagttcacgaggac 323  Q
    |||||||||||||||||| | |||| |||||||| ||||||||||    
T  4494894 tattttatgcattgtccataccaactgagctaagctcacgaggac 4494938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 324
Target Start/End: Original strand, 12333584 - 12333636
Alignment:
Q  272 ccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggaca 324  Q
    |||||| |||||||||||||||||| |  ||| |||||||| |||||||||||    
T  12333584 ccttgcatattttatgcattgtccatactaactgagctaagctcacgaggaca 12333636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000002; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 329
Target Start/End: Original strand, 20370297 - 20370354
Alignment:
Q  272 ccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggacatatgt 329  Q
    |||||| |||||||||||||||||| |||||| |||||||| ||||||||| ||||||    
T  20370297 ccttgcatattttatgcattgtccatatcaactgagctaagctcacgaggatatatgt 20370354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 239 - 323
Target Start/End: Complemental strand, 29631264 - 29631180
Alignment:
Q  239 ttttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggac 323  Q
    ||||||||| |||  || |||||||||||||| |||||| ||| |||||||||||||| | |||| |||||||| ||| ||||||    
T  29631264 ttttttggtggtggccggggtttgaatcccgaaccttgcatatattatgcattgtccataccaactgagctaagctcatgaggac 29631180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 272 - 324
Target Start/End: Original strand, 32843278 - 32843330
Alignment:
Q  272 ccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggaca 324  Q
    |||||| |||||||||||||||||||| |||| |||||||| |||||||||||    
T  32843278 ccttgcatattttatgcattgtccaaaccaactgagctaagctcacgaggaca 32843330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 241 - 324
Target Start/End: Original strand, 986938 - 987021
Alignment:
Q  241 ttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggaca 324  Q
    ||||||||||| ||| |||||||| || |  |||||| |||||||| |||||||| ||| ||| ||| ||||||||||||||||    
T  986938 ttttggtagtggtcggggtttgaaccctggaccttgcatattttatacattgtccgaataaactgagttaagttcacgaggaca 987021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 239 - 322
Target Start/End: Original strand, 25340907 - 25340990
Alignment:
Q  239 ttttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgagga 322  Q
    ||||||||| |||  || |||||||| ||||  |||||| |||||||||||||||||| | |||| |||||||| |||||||||    
T  25340907 ttttttggtggtggccggggtttgaaccccggaccttgcatattttatgcattgtccataccaactgagctaagctcacgagga 25340990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 323
Target Start/End: Original strand, 17507700 - 17507766
Alignment:
Q  257 ggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggac 323  Q
    |||| ||||||||| |||||| ||| |||||||||||| | |||||| ||||||| |||||||||||    
T  17507700 ggttcgaatcccgaaccttgcatatattatgcattgtcaatatcaactgagctaatttcacgaggac 17507766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 241 - 323
Target Start/End: Complemental strand, 48531353 - 48531272
Alignment:
Q  241 ttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggac 323  Q
    ||||||||||| ||| |||||||| ||||| |||||| ||||||||| ||| ||| || |||| |||||||| ||||||||||    
T  48531353 ttttggtagtggtcggggtttgaa-cccgaaccttgcatattttatgtattatcccaaccaactgagctaagctcacgaggac 48531272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 323
Target Start/End: Original strand, 48796219 - 48796285
Alignment:
Q  257 ggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggac 323  Q
    |||||||| ||||| |||||| ||| ||||||||||||||||  ||| |||||||| ||||||||||    
T  48796219 ggtttgaaccccgaaccttgcatatcttatgcattgtccaaactaactgagctaagctcacgaggac 48796285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 272 - 325
Target Start/End: Original strand, 21506774 - 21506827
Alignment:
Q  272 ccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggacat 325  Q
    |||||| |||||||||||||||||| | |||| |||||||| ||||||||||||    
T  21506774 ccttgcatattttatgcattgtccataccaactgagctaagctcacgaggacat 21506827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 324
Target Start/End: Original strand, 4216415 - 4216467
Alignment:
Q  272 ccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggaca 324  Q
    |||||| ||| |||||||||||||  |||||| ||||||||||||||||||||    
T  4216415 ccttgcatatattatgcattgtccttatcaactgagctaagttcacgaggaca 4216467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 311
Target Start/End: Original strand, 7202899 - 7202971
Alignment:
Q  239 ttttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaa 311  Q
    |||||||||||||| || |||||||| || || |||||| ||||||||||||||| | || |||| |||||||    
T  7202899 ttttttggtagtgaccggggtttgaaccctgaaccttgcatattttatgcattgttccaaccaactgagctaa 7202971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 324
Target Start/End: Complemental strand, 44579681 - 44579629
Alignment:
Q  272 ccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggaca 324  Q
    |||||| |||||||||||||||||| | |||| |||||||| |||||||||||    
T  44579681 ccttgcatattttatgcattgtccataccaactgagctaagctcacgaggaca 44579629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 239 - 322
Target Start/End: Original strand, 11508466 - 11508549
Alignment:
Q  239 ttttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgagga 322  Q
    |||||| |||||| ||| |||| ||| ||||  || ||| ||| | |||||||||||| ||||||||||||||| |||||||||    
T  11508466 tttttttgtagtggtcggggttcgaaccccggaccctgcatatatcatgcattgtccatatcaaccgagctaagctcacgagga 11508549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 272 - 323
Target Start/End: Complemental strand, 53162243 - 53162192
Alignment:
Q  272 ccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggac 323  Q
    |||||| |||||||||||||||||| |||||  |||||||| ||||||||||    
T  53162243 ccttgcatattttatgcattgtccatatcaattgagctaagctcacgaggac 53162192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 325
Target Start/End: Complemental strand, 15881168 - 15881082
Alignment:
Q  239 ttttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggacat 325  Q
    ||||||||| |||  ||||||| ||| |||||  ||||| ||||| |||||||||||| ||||||  ||||||| ||||||| ||||    
T  15881168 ttttttggtggtggccgaggttcgaaccccgaatcttgcatatttaatgcattgtccatatcaacttagctaagctcacgagaacat 15881082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 266 - 324
Target Start/End: Original strand, 21331427 - 21331485
Alignment:
Q  266 cccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggaca 324  Q
    ||||| |||||| ||| |||||||||||||| | |||| |||||||| |||||||||||    
T  21331427 cccgaaccttgcatatattatgcattgtccataacaactgagctaagctcacgaggaca 21331485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 326
Target Start/End: Original strand, 4332652 - 4332737
Alignment:
Q  241 ttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggacata 326  Q
    ||||||||||| |||  ||||||| ||||  |||||  ||| ||||||||| | |||| |||| |||||||| |||||||||||||    
T  4332652 ttttggtagtggtcggagtttgaaccccggaccttggatatattatgcattattcaaaccaactgagctaagctcacgaggacata 4332737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 324
Target Start/End: Complemental strand, 7738747 - 7738662
Alignment:
Q  239 ttttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggaca 324  Q
    ||||||||| |||| || || ||||| ||||  |||||| |||||||||||||||||  | |||| ||| |||| |||||||||||    
T  7738747 ttttttggttgtgaccggggcttgaaccccggaccttgcatattttatgcattgtccctaccaactgagttaagctcacgaggaca 7738662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 326
Target Start/End: Complemental strand, 8127523 - 8127454
Alignment:
Q  257 ggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggacata 326  Q
    |||||||| ||| | |||||| |||||||||||||||||  | |||| ||| |||| |||||||||||||    
T  8127523 ggtttgaaccccaaaccttgcatattttatgcattgtccttaccaactgagttaagctcacgaggacata 8127454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 324
Target Start/End: Complemental strand, 9598509 - 9598432
Alignment:
Q  247 tagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggaca 324  Q
    ||||| ||| |||||||||| ||  |||||| |||||||| |||||||| || |||| || ||||| |||||||||||    
T  9598509 tagtggtcggggtttgaatctcggaccttgcatattttatacattgtcccaaccaactgaactaagctcacgaggaca 9598432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 320
Target Start/End: Original strand, 20612260 - 20612341
Alignment:
Q  239 ttttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgag 320  Q
    |||||||||||||  || |||||||| ||| | |||||| ||| ||||||||||| ||| ||||  |||||||| |||||||    
T  20612260 ttttttggtagtggccggggtttgaaccccaaaccttgcatatattatgcattgttcaagtcaaatgagctaagctcacgag 20612341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 326
Target Start/End: Original strand, 21628873 - 21628958
Alignment:
Q  241 ttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggacata 326  Q
    ||||||||||| |||  ||||||| ||||  | |||  ||| ||||||||| |||||| |||| |||||||| |||||||||||||    
T  21628873 ttttggtagtggtcggagtttgaaccccggacgttggatatattatgcattatccaaaccaactgagctaagctcacgaggacata 21628958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 324
Target Start/End: Complemental strand, 32629158 - 32629073
Alignment:
Q  239 ttttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggaca 324  Q
    |||||| || ||| |||| ||| ||| ||||  |||||| |||||||||||||||||| | |||| |||||||| ||||| |||||    
T  32629158 tttttttgtggtggtcgatgttcgaaccccggaccttgcatattttatgcattgtccataccaactgagctaagctcacgtggaca 32629073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 312
Target Start/End: Original strand, 38034792 - 38034865
Alignment:
Q  239 ttttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaag 312  Q
    ||||| |||||||  ||||||||||| ||||  |||||| ||||||||| ||||||| || |||| ||||||||    
T  38034792 tttttgggtagtggccgaggtttgaaccccggaccttgcatattttatgtattgtcccaaccaactgagctaag 38034865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 326
Target Start/End: Complemental strand, 39481201 - 39481132
Alignment:
Q  257 ggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggacata 326  Q
    |||||||| |||||  ||| | || ||||||||||||||| | |||| |||||||| |||||||||||||    
T  39481201 ggtttgaaccccgaatcttacataatttatgcattgtccataccaactgagctaagctcacgaggacata 39481132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 310
Target Start/End: Complemental strand, 39779084 - 39779031
Alignment:
Q  257 ggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagcta 310  Q
    |||||||| ||||| |||||| ||| |||||||||||||| | |||||||||||    
T  39779084 ggtttgaaccccgaaccttgcatatattatgcattgtccataccaaccgagcta 39779031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 326
Target Start/End: Complemental strand, 42372596 - 42372511
Alignment:
Q  241 ttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggacata 326  Q
    ||||||||||| |||  ||||||| ||||  |||||  ||| | ||||||| |||||| |||||||| |||| |||||||||||||    
T  42372596 ttttggtagtggtcggagtttgaaccccggaccttggatatatcatgcattatccaaaccaaccgagttaagctcacgaggacata 42372511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 311
Target Start/End: Complemental strand, 51505928 - 51505879
Alignment:
Q  262 gaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaa 311  Q
    ||||||| | |||||| |||||||||||||||||| |||||| |||||||    
T  51505928 gaatcccaaaccttgcatattttatgcattgtccatatcaactgagctaa 51505879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 324
Target Start/End: Original strand, 10498711 - 10498763
Alignment:
Q  272 ccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggaca 324  Q
    |||||| ||| |||||||||||||| | |||| |||||||| |||||||||||    
T  10498711 ccttgcatatattatgcattgtccataccaactgagctaagctcacgaggaca 10498763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 291
Target Start/End: Complemental strand, 16873864 - 16873812
Alignment:
Q  239 ttttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcatt 291  Q
    ||||||||| |||||||||||||||| ||| | |||||| ||| |||||||||    
T  16873864 ttttttggtggtgatcgaggtttgaacccctaaccttgcatatattatgcatt 16873812  T

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Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 323
Target Start/End: Original strand, 28244087 - 28244171
Alignment:
Q  239 ttttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggac 323  Q
    |||||| || ||||||| |||| ||| ||||  |||||| ||||||||||||||| || | |||| ||| |||| ||||||||||    
T  28244087 tttttttgtggtgatcggggttcgaaccccggaccttgcatattttatgcattgttcataccaactgagttaagctcacgaggac 28244171  T

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Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 324
Target Start/End: Complemental strand, 33745144 - 33745092
Alignment:
Q  272 ccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggaca 324  Q
    |||||| |||||||||||||||||| |||||  |||||||| ||||| |||||    
T  33745144 ccttgcatattttatgcattgtccatatcaattgagctaagctcacggggaca 33745092  T

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Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 104
Target Start/End: Complemental strand, 42030537 - 42030441
Alignment:
Q  8 aaattactccatgttttgtagtagaagttaaactttgagggattttacatggattaaatatttctttgagcataggttttaggaatatccaagtgta 104  Q
    ||||||||||||||| |||  |||||| | ||||||| ||| |||||||  || | || ||| ||| ||| | |||||||||||||||| |||||||    
T  42030537 aaattactccatgttctgttctagaagctgaactttgggggcttttacactgactgaagattgcttagagtagaggttttaggaatatcaaagtgta 42030441  T

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Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 294
Target Start/End: Original strand, 42886507 - 42886547
Alignment:
Q  254 cgaggtttgaatcccgatccttgcgtattttatgcattgtc 294  Q
    ||||||||||| ||||| |||||| ||||||||||||||||    
T  42886507 cgaggtttgaaccccgaaccttgcatattttatgcattgtc 42886547  T

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Target: scaffold0006 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 273 - 324
Target Start/End: Complemental strand, 171203 - 171152
Alignment:
Q  273 cttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggaca 324  Q
    ||||| ||||||||||||||| |||| ||||||||||||| |||||||||||    
T  171203 cttgcatattttatgcattgttcaaaccaaccgagctaagctcacgaggaca 171152  T

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Target: scaffold0006; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 324
Target Start/End: Complemental strand, 208976 - 208935
Alignment:
Q  283 ttatgcattgtccaaatcaaccgagctaagttcacgaggaca 324  Q
    |||||||||||||||| |||| |||||||| |||||||||||    
T  208976 ttatgcattgtccaaaccaactgagctaagctcacgaggaca 208935  T

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Target: scaffold0011 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 239 - 324
Target Start/End: Complemental strand, 185341 - 185256
Alignment:
Q  239 ttttttggtagtgatcgaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggaca 324  Q
    ||||||| | |||| || |||||||| ||||   ||||| |||||||||||||||||| | |||| |||||||| |||||||||||    
T  185341 ttttttgatggtgaccggggtttgaaccccggatcttgcatattttatgcattgtccataccaactgagctaagctcacgaggaca 185256  T

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Target: scaffold0350 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0350
Description:

Target: scaffold0350; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 327
Target Start/End: Complemental strand, 1282 - 1238
Alignment:
Q  283 ttatgcattgtccaaatcaaccgagctaagttcacgaggacatat 327  Q
    |||||||||||||| |||||| ||||||||||||||| |||||||    
T  1282 ttatgcattgtccatatcaactgagctaagttcacgaagacatat 1238  T

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Target: scaffold0157 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 271 - 322
Target Start/End: Complemental strand, 18175 - 18124
Alignment:
Q  271 tccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgagga 322  Q
    ||||||| |||||| |||||||||||||||||| |||||||| | |||||||    
T  18175 tccttgcatattttctgcattgtccaaatcaactgagctaagctgacgagga 18124  T

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Target: scaffold0024 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 257 - 324
Target Start/End: Original strand, 104785 - 104852
Alignment:
Q  257 ggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggaca 324  Q
    ||||||||||||   |||||  |||||||||||||||||| ||||||||| ||||| ||||| |||||    
T  104785 ggtttgaatcccagaccttgtctattttatgcattgtccatatcaaccgaactaagctcacggggaca 104852  T

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Target: scaffold0045 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 320
Target Start/End: Complemental strand, 63509 - 63471
Alignment:
Q  282 tttatgcattgtccaaatcaaccgagctaagttcacgag 320  Q
    ||||||||||||||| |||||| ||||||||||||||||    
T  63509 tttatgcattgtccatatcaactgagctaagttcacgag 63471  T

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Target: scaffold0045; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 320
Target Start/End: Complemental strand, 70841 - 70803
Alignment:
Q  282 tttatgcattgtccaaatcaaccgagctaagttcacgag 320  Q
    ||||||||||||||| |||||| ||||||||||||||||    
T  70841 tttatgcattgtccatatcaactgagctaagttcacgag 70803  T

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Target: scaffold1149 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1149
Description:

Target: scaffold1149; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 324
Target Start/End: Complemental strand, 2394 - 2325
Alignment:
Q  255 gaggtttgaatcccgatccttgcgtattttatgcattgtccaaatcaaccgagctaagttcacgaggaca 324  Q
    |||||||||| ||| | |||||| ||| |||||||||||||  | ||||||||||||| |||||| ||||    
T  2394 gaggtttgaaccccaaaccttgcatatattatgcattgtccctaccaaccgagctaagctcacgacgaca 2325  T

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Target: scaffold0012 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 324
Target Start/End: Complemental strand, 118857 - 118812
Alignment:
Q  279 tattttatgcattgtccaaatcaaccgagctaagttcacgaggaca 324  Q
    ||||||||||||||| |||| |||| |||||||| |||||||||||    
T  118857 tattttatgcattgttcaaaccaactgagctaagctcacgaggaca 118812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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