View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20204_low_32 (Length: 251)
Name: NF20204_low_32
Description: NF20204
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20204_low_32 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 13 - 251
Target Start/End: Complemental strand, 34843762 - 34843524
Alignment:
| Q |
13 |
aatatcatcagcacatttaagtaaaatggtaagattagatcatgaaccatgatcattgtacatggcgaagggagatcaagagtcacgcagaactcttcat |
112 |
Q |
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| T |
34843762 |
aatatcatcagcacatataagtaaaatggtaagattagatcatgaaccatgatcattgtacatggcgaagggagatcaagagtcacacagaactcttcat |
34843663 |
T |
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| Q |
113 |
ataagttgaaatataatcgttcaatattccaaccttggttagcttccaaagaagnnnnnnnnnctagatcaatttaacttagaaacggaggaaaagtacc |
212 |
Q |
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| T |
34843662 |
ataagttgaaatataatcgttcaatattccaaccttggttagcttccaaagaagaagaaaaaactagatcaatttaacttagaaacggaggaaaagtacc |
34843563 |
T |
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| Q |
213 |
aaagcaataaacccttccgttttgttctatatttccatt |
251 |
Q |
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| T |
34843562 |
aaagcaataaacccttccgttttgttctatatttccatt |
34843524 |
T |
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