View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20209_high_1 (Length: 967)

Name: NF20209_high_1
Description: NF20209
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20209_high_1
NF20209_high_1
[»] chr8 (6 HSPs)
chr8 (2-961)||(14003254-14004212)
chr8 (1-961)||(5766591-5767553)
chr8 (15-145)||(18314638-18314768)
chr8 (626-671)||(17627610-17627655)
chr8 (13-71)||(17635654-17635712)
chr8 (105-142)||(17643025-17643062)
[»] chr4 (10 HSPs)
chr4 (199-320)||(1481511-1481632)
chr4 (7-142)||(8186351-8186486)
chr4 (520-651)||(641449-641580)
chr4 (201-316)||(8186539-8186654)
chr4 (627-705)||(547382-547460)
chr4 (625-723)||(55908278-55908376)
chr4 (502-562)||(1601013-1601073)
chr4 (205-267)||(532630-532692)
chr4 (194-248)||(7225324-7225378)
chr4 (523-648)||(3438101-3438226)
[»] chr1 (2 HSPs)
chr1 (631-705)||(19468064-19468138)
chr1 (199-244)||(19467627-19467672)
[»] chr5 (2 HSPs)
chr5 (505-732)||(38266985-38267213)
chr5 (39-142)||(29021726-29021829)
[»] scaffold0262 (1 HSPs)
scaffold0262 (631-701)||(390-460)
[»] chr2 (1 HSPs)
chr2 (625-723)||(1037214-1037312)
[»] chr6 (1 HSPs)
chr6 (13-121)||(6403528-6403636)


Alignment Details
Target: chr8 (Bit Score: 912; Significance: 0; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 912; E-Value: 0
Query Start/End: Original strand, 2 - 961
Target Start/End: Complemental strand, 14004212 - 14003254
Alignment:
Q  2 catccttcctgctaatggtttgcgagctttctctcggaacattacaactttgacctcacttatttgttccaaccttaattctcttaatagcactgatctc 101  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14004212 catccttcctgctaatggtttgcgagctttctctcagaacattacaactttgacctcacttatttgttccaaccttaattctcttaatagcactgatctc 14004113  T
Q  102 catctcattgctgattgttttcctttgctagaagaactcgacctcgcttacccctctaaaatcattaatcacacacgtgctaccttctccactggactag 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  14004112 catctcattgctgattgttttcctttgctagaagaactcgacctcgcttacccctctaaaatcattaatcacacacatgctaccttctccactggactag 14004013  T
Q  202 aggctctttcattagcactcatcaaactccgcaaggttaatctctcttatcatggctacctcaacggcactttgctttctcacttgttcaagaactgcaa 301  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14004012 aggctctttcattagcactcatcaaactccgcaaggttaatctctcttatcatggctacctcaacggcactttgctttctcacttgttcaagaactgcaa 14003913  T
Q  302 gtttctccaagaggtcatcttgcttagatgtgaacaattaaccgtcgcaggcattgatcttgctctccgccagaaaccaacattgacttctttatccatt 401  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  14003912 gtttctccaagatgtcatcttgcttagatgtgaacaattaaccgtcgcaggcgttgatcttgctctccgccagagaccaacattgacttctttatccatt 14003813  T
Q  402 acaggtactgttactactggtttggaacatcttacctcacatttcatcgactccttgttgagtttgaagggatttgacttctcttcttttgacgggattt 501  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  14003812 acaggtactgttactactggtttggaatatcttacctcacatttcatcgactccttgttgagtttgaagggatt-gacttctcttcttttgacgggattt 14003714  T
Q  502 cgtatctcagatcaattcctctcctccattgcaatggaaagtcttcctttgaggaggcttgtactcagctattgccccggatatacttattctggaatct 601  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14003713 catatctcagatcaattcctctcctccattgcaatggaaagtcttcctttgaggaggcttgtactcagctattgccccggatatacttattctggaatct 14003614  T
Q  602 catttttgttatctaagtcgaaacgtatccaacatttggatcttcaatatgctgattttttgaatgatcattgtgttgctgagttgtctttgtttcttgg 701  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  14003613 catttttgttatctaagtcgaaacgtatccaacatttggatcttcaatatgctgattttttgaatgatcattgtgctgctgagttgtctttgtttcttgg 14003514  T
Q  702 tgatctgctctctatcaaccttggtaattgtcgcttgcgcagagtttccactttctttgctctcattaccaactgtccttcacttaccgagatcaatatg 801  Q
    |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14003513 tgatctgctctctatcaaccttggtaattgtcgcttgctcacagtttccactttctttgctctcattaccaactgtccttcacttaccgagatcaatatg 14003414  T
Q  802 aatcgcacaaatatccagggaaccaccatacctaattctctgatggatcgtcttgtaaaccctcaattcaagtctctctttctggctagcacttgtttac 901  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14003413 aatcgcacaaatatccagggaaccaccatacctaattctctgatggatcgtcttgtaaaccctcaattcaagtctctctttctggctagcacttgtttac 14003314  T
Q  902 aagatcaaaatatcatcatgtttgctgcccttttccccaatctgcagcagcttcatctca 961  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14003313 aagatcaaaatatcatcatgtttgctgcccttttccccaatctgcagcagcttcatctca 14003254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 866; E-Value: 0
Query Start/End: Original strand, 1 - 961
Target Start/End: Original strand, 5766591 - 5767553
Alignment:
Q  1 tcatccttcctgctaatggtttgcgagctttctctcggaacattacaactttgacctcacttatttgttccaaccttaattctcttaatagcactgatct 100  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |    
T  5766591 tcatccttcctgctaatggtttgcgagctttctctcagaacattacaactttgacctcacttatttgttccaaccttatttctcttaatagcactgatat 5766690  T
Q  101 ccatctcattgctgattgttttcctttgctagaagaactcgacctcgcttacccctctaaaatcattaatcacacacgtgctaccttctccactggacta 200  Q
    ||| ||||||||||||  ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  5766691 ccacctcattgctgatacttttcctttgctagaagaacttgacctcgcttacccctctaaaatcattaatcacacacatgctaccttctccactggacta 5766790  T
Q  201 gaggctctttcattagcactcatcaaactccgcaaggttaatctctcttatcatggctacctcaacggcactttgctttctcacttgttcaagaactgca 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5766791 gaggctctttcattagcactcatcaaactccgcaaggttaatctctcttatcatggctacctcaacggcactttgctttctcacttgttcaagaactgca 5766890  T
Q  301 agtttctccaagaggtcatcttgcttagatgtgaacaattaaccgtcgcaggcattgatcttgctctccgccagaaaccaacattgacttctttatccat 400  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||    
T  5766891 agtttctccaagaggtcatcttgcttagatgtgaacaattaaccatcgcaggcgttgatcttgctctcctccagaaaccaacattgacttctttatccat 5766990  T
Q  401 tacaggtactgttactactggtttggaacatcttacctcacatttcatcgactccttgttgagtttgaagggatttgacttctcttcttttgacgggatt 500  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  5766991 tacatgtactgttactactggtttggaacatcttacctcacatttcatcgactccttgttgagtttgaaggga-ttgacttctcttcttttgacgggatt 5767089  T
Q  501 tcgtatctcagatcaattcctctcctccattgcaatggaaagtcttcctttgaggaggcttgtactcagctattgccccggatatacttattctggaatc 600  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5767090 tcgtatctcagatcaatttctctcctccattgcaatggaaagtcttcctttgaggaggcttgtactcagctattgccccggatatacttattctggaatc 5767189  T
Q  601 tcatttttgttatctaagtcgaaacgtatccaacatttggatcttcaatatgctgattttttgaatgatcattgtgttgctgagttgtctttgtttcttg 700  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  5767190 tcatttttgttatctaagtcgaaacgtatccaacatttggatcttcaatatactgattttttgaatgatcattgtgttgctgagttgtctttgtttcttg 5767289  T
Q  701 gtgatctgctctctatcaaccttggtaattgtcgcttgcgcagagtttccactttctttgctctcattaccaactgtccttcacttaccgagatcaatat 800  Q
    |||||||||||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5767290 gtgatctgctctctctcaaccttggtaattgtcgcttgctcacagtttccactttctttgctctcattaccaactgtccttcacttaccgagatcaatat 5767389  T
Q  801 gaatcgcacaaatatccagggaaccaccatacctaattctctgatggatcgtcttgtaaaccctcaattcaagtctctctttctggctag---cacttgt 897  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   | |||||    
T  5767390 gaatcgcacaaatatccagggaaccaccatacctaattctctgatggatcgtcttgtaaaccctcaattcaagtctctctttctggctagcgccgcttgt 5767489  T
Q  898 ttacaagatcaaaatatcatcatgtttgctgcccttttccccaatctgcagcagcttcatctca 961  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5767490 ttagaagatcaaaatatcatcatgtttgctgcccttttccccaatctgcagcagcttcatctca 5767553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 145
Target Start/End: Original strand, 18314638 - 18314768
Alignment:
Q  15 aatggtttgcgagctttctctcggaacattacaactttgacctcacttatttgttccaaccttaattctcttaatagcactgatctccatctcattgctg 114  Q
    ||||| || |||| ||||||||  || ||||||||||||||||||||    |||||  || || | |||||  || |||||||||||   ||||||||||    
T  18314638 aatggcttacgagttttctctcaaaatattacaactttgacctcactctcatgttcttacattcaatctctccatggcactgatctcttcctcattgctg 18314737  T
Q  115 attgttttcctttgctagaagaactcgacct 145  Q
    ||||||| |||||||| ||||||||||||||    
T  18314738 attgtttccctttgctcgaagaactcgacct 18314768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 626 - 671
Target Start/End: Original strand, 17627610 - 17627655
Alignment:
Q  626 gtatccaacatttggatcttcaatatgctgattttttgaatgatca 671  Q
    |||||||||||||||||||||| |||||| ||||||||||| ||||    
T  17627610 gtatccaacatttggatcttcagtatgcttattttttgaataatca 17627655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 71
Target Start/End: Original strand, 17635654 - 17635712
Alignment:
Q  13 ctaatggtttgcgagctttctctcggaacattacaactttgacctcacttatttgttcc 71  Q
    ||||||| || ||||||||||| ||||| ||||||||||||||||| || | |||||||    
T  17635654 ctaatgggttacgagctttctcccggaatattacaactttgacctctctcacttgttcc 17635712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 142
Target Start/End: Original strand, 17643025 - 17643062
Alignment:
Q  105 ctcattgctgattgttttcctttgctagaagaactcga 142  Q
    ||||| ||||||||||| ||||||||||||||||||||    
T  17643025 ctcatcgctgattgtttccctttgctagaagaactcga 17643062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 70; Significance: 5e-31; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 199 - 320
Target Start/End: Complemental strand, 1481632 - 1481511
Alignment:
Q  199 tagaggctctttcattagcactcatcaaactccgcaaggttaatctctcttatcatggctacctcaacggcactttgctttctcacttgttcaagaactg 298  Q
    |||||||||||||||| |||||| |||||||||||||| ||||||||||| |||||  |||| |||||| || |||||||| ||| ||||||||||||||    
T  1481632 tagaggctctttcattggcactcttcaaactccgcaagcttaatctctctgatcattactacgtcaacgacattttgctttttcaattgttcaagaactg 1481533  T
Q  299 caagtttctccaagaggtcatc 320  Q
    |||||||||| || ||||||||    
T  1481532 caagtttctcgaaaaggtcatc 1481511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 142
Target Start/End: Original strand, 8186351 - 8186486
Alignment:
Q  7 ttcctgctaatggtttgcgagctttctctcggaacattacaactttgacctcacttatttgttccaaccttaattctcttaatagcactgatctccatct 106  Q
    ||||||| ||||| ||||||| | |||| || || |||||||||||||||||||| |  ||||||||| || | ||| | |||||||||||  ||   ||    
T  8186351 ttcctgcaaatggattgcgagttctctcccgaaatattacaactttgacctcactcacatgttccaacattgaatctatcaatagcactgacatcttcct 8186450  T
Q  107 cattgctgattgttttcctttgctagaagaactcga 142  Q
    ||| || |||||||||||||| ||||||||||||||    
T  8186451 catcgccgattgttttcctttcctagaagaactcga 8186486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 520 - 651
Target Start/End: Complemental strand, 641580 - 641449
Alignment:
Q  520 ctctcctccattgcaatggaaagtcttcctttgaggaggcttgtactcagctattgccccggatatacttattctggaatctcatttttgttatctaagt 619  Q
    |||||||| ||||||||| || | |||||||||| ||| ||||| ||| || ||||| |||| |||||||||  ||||||||  | ||||||||| |||     
T  641580 ctctcctctattgcaatgaaaggccttcctttgacgagacttgtcctctgcaattgcaccggctatacttatgatggaatcttgtgtttgttatccaaga 641481  T
Q  620 cgaaacgtatccaacatttggatcttcaatat 651  Q
      ||| || | |||||| ||||||||||||||    
T  641480 gtaaatgtttacaacatctggatcttcaatat 641449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 201 - 316
Target Start/End: Original strand, 8186539 - 8186654
Alignment:
Q  201 gaggctctttcattagcactcatcaaactccgcaaggttaatctctcttatcatggctacctcaacggcactttgctttctcacttgttcaagaactgca 300  Q
    |||||||||||||| |||||  ||||||| |||||||||||||| ||| |||||  |||  |||||| ||  ||||||| ||||||||| ||||| || |    
T  8186539 gaggctctttcattggcacttttcaaacttcgcaaggttaatctatctaatcataactatatcaacgacaaattgctttttcacttgttaaagaattgta 8186638  T
Q  301 agtttctccaagaggt 316  Q
    ||  |||| |||||||    
T  8186639 agcatctcgaagaggt 8186654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 627 - 705
Target Start/End: Complemental strand, 547460 - 547382
Alignment:
Q  627 tatccaacatttggatcttcaatatgctgattttttgaatgatcattgtgttgctgagttgtctttgtttcttggtgat 705  Q
    |||||||||||| ||||||||| |||||| |||||||| | ||||   ||||  ||| |||||||||||||||||||||    
T  547460 tatccaacatttagatcttcaaaatgctgtttttttgactaatcaacatgttcttgacttgtctttgtttcttggtgat 547382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 625 - 723
Target Start/End: Original strand, 55908278 - 55908376
Alignment:
Q  625 cgtatccaacatttggatcttcaatatgctgattttttgaatgatcattgtgttgctgagttgtctttgtttcttggtgatctgctctctatcaacctt 723  Q
    ||||| |||||||||||||||||| ||||    ||| ||||||||||   ||| || |||||||||||||||||||||||| || | ||||| ||||||    
T  55908278 cgtatacaacatttggatcttcaaaatgccacgtttatgaatgatcacgatgtcgcagagttgtctttgtttcttggtgatttggtgtctataaacctt 55908376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 502 - 562
Target Start/End: Complemental strand, 1601073 - 1601013
Alignment:
Q  502 cgtatctcagatcaattcctctcctccattgcaatggaaagtcttcctttgaggaggcttg 562  Q
    |||||||| ||||| || |||||||| ||||||| ||||| || |||||||||||||||||    
T  1601073 cgtatctcggatcagttgctctcctctattgcaaaggaaaatcctcctttgaggaggcttg 1601013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 205 - 267
Target Start/End: Complemental strand, 532692 - 532630
Alignment:
Q  205 ctctttcattagcactcatcaaactccgcaaggttaatctctcttatcatggctacctcaacg 267  Q
    ||||||||||| ||||  |||||||||||||||||||||| |||  ||||| |||| ||||||    
T  532692 ctctttcattatcacttttcaaactccgcaaggttaatctttctactcatgactacatcaacg 532630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 248
Target Start/End: Original strand, 7225324 - 7225378
Alignment:
Q  194 tggactagaggctctttcattagcactcatcaaactccgcaaggttaatctctct 248  Q
    |||| ||||||||||||||| ||||||  |||||||||| | |||||||||||||    
T  7225324 tggagtagaggctctttcatcagcacttttcaaactccgtagggttaatctctct 7225378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 523 - 648
Target Start/End: Original strand, 3438101 - 3438226
Alignment:
Q  523 tcctccattgcaatggaaagtcttcctttgaggaggcttgtactcagctattgccccggatatacttattctggaatctcatttttgttatctaagtcga 622  Q
    ||||| |||||||| | | ||||||||||||| |||||||| |||  | ||||| |||| |||| |||| ||| |||||  | | ||||||| ||||       
T  3438101 tcctctattgcaattggaggtcttcctttgagaaggcttgtcctccacaattgcaccggctatagttatgctgaaatcttttctctgttatccaagtgtc 3438200  T
Q  623 aacgtatccaacatttggatcttcaa 648  Q
    || |||| ||||||||||||||||||    
T  3438201 aatgtatacaacatttggatcttcaa 3438226  T

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Target: chr1 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 631 - 705
Target Start/End: Original strand, 19468064 - 19468138
Alignment:
Q  631 caacatttggatcttcaatatgctgattttttgaatgatcattgtgttgctgagttgtctttgtttcttggtgat 705  Q
    ||||||||||||||||||  |||||  |||||||||||||| | ||||| | |||||||||||||||||||||||    
T  19468064 caacatttggatcttcaacgtgctgggtttttgaatgatcactatgttgataagttgtctttgtttcttggtgat 19468138  T

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Target: chr1; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 244
Target Start/End: Original strand, 19467627 - 19467672
Alignment:
Q  199 tagaggctctttcattagcactcatcaaactccgcaaggttaatct 244  Q
    |||||||||||||| | |||||  ||||||||||||||||||||||    
T  19467627 tagaggctctttcacttgcacttctcaaactccgcaaggttaatct 19467672  T

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Target: chr5 (Bit Score: 37; Significance: 0.00000000002; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 505 - 732
Target Start/End: Original strand, 38266985 - 38267213
Alignment:
Q  505 atctcagatcaattcctctcctccattgcaatggaaagtcttcctttgaggaggcttgtactcagctattgccccggatatacttattctggaatc-tca 603  Q
    ||||| ||||| ||||| ||||| ||||||||| ||||||||||||||| ||| ||||  ||| | |||||| |||| || ||||  ||||||||| |      
T  38266985 atctccgatcacttcctttcctctattgcaatgcaaagtcttcctttgacgagccttggcctcggatattgcaccggctacactttctctggaatcttgc 38267084  T
Q  604 tttttgttatctaagtcgaaacgtatccaacatttggatcttcaatatgctgattttttgaatgatcattgtgttgctgagttgtctttgtttcttggtg 703  Q
    ||||| |||||  | |    |||||| ||||||||||| |||||| |  |||||||| | | ||||||   |||||| ||||||||||||||||||  |     
T  38267085 ttttttttatcctactgtccacgtatacaacatttggaccttcaagaaactgattttctcactgatcaccatgttgccgagttgtctttgtttcttcctc 38267184  T
Q  704 atctgctctctatcaaccttggtaattgt 732  Q
    ||||| | ||||| |||||| || |||||    
T  38267185 atctggtgtctataaaccttagttattgt 38267213  T

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Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 142
Target Start/End: Complemental strand, 29021829 - 29021726
Alignment:
Q  39 aacattacaactttgacctcacttatttgttccaaccttaattctcttaatagcactgatctccatctcattgctgattgttttcctttgctagaagaac 138  Q
    |||||||| ||||||||||| || | ||||| | ||||| |  | || ||||||||| |||||  ||| ||||||||||| || |||||||| |||||||    
T  29021829 aacattactactttgacctctctcacttgttaccaccttgaaaccctcaatagcactcatctctttcttattgctgattgcttccctttgctcgaagaac 29021730  T
Q  139 tcga 142  Q
    ||||    
T  29021729 tcga 29021726  T

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Target: scaffold0262 (Bit Score: 35; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 631 - 701
Target Start/End: Complemental strand, 460 - 390
Alignment:
Q  631 caacatttggatcttcaatatgctgattttttgaatgatcattgtgttgctgagttgtctttgtttcttgg 701  Q
    |||||||||||||||||| ||||    ||| |||||||||||  |||||| ||||||||||||||||||||    
T  460 caacatttggatcttcaaaatgccatgtttatgaatgatcatgatgttgcagagttgtctttgtttcttgg 390  T

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Target: chr2 (Bit Score: 35; Significance: 0.0000000004; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 625 - 723
Target Start/End: Original strand, 1037214 - 1037312
Alignment:
Q  625 cgtatccaacatttggatcttcaatatgctgattttttgaatgatcattgtgttgctgagttgtctttgtttcttggtgatctgctctctatcaacctt 723  Q
    ||||| |||||||||||||||||| ||||    ||| ||||||||||   ||| || |||||||||||||||||||||||| || | ||||| ||||||    
T  1037214 cgtatacaacatttggatcttcaaaatgccacgtttatgaatgatcacgatgtcgcagagttgtctttgtttcttggtgatttggtgtctataaacctt 1037312  T

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Target: chr6 (Bit Score: 33; Significance: 0.000000006; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 121
Target Start/End: Complemental strand, 6403636 - 6403528
Alignment:
Q  13 ctaatggtttgcgagctttctctcggaacattacaactttgacctcacttatttgttccaaccttaattctcttaatagcactgatctccatctcattgc 112  Q
    ||||||| |||||||||||||| || ||  | || ||||||||||| |||  ||||||| || || |||||||||||||| || |||||   ||||||||    
T  6403636 ctaatgggttgcgagctttctcccgaaaggtcactactttgacctctcttgattgttccgacattgattctcttaatagctctcatctcttactcattgc 6403537  T
Q  113 tgattgttt 121  Q
     ||||||||    
T  6403536 cgattgttt 6403528  T

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