View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20209_low_2 (Length: 836)

Name: NF20209_low_2
Description: NF20209
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20209_low_2
NF20209_low_2
[»] chr3 (78 HSPs)
chr3 (1-348)||(647347-647694)
chr3 (413-821)||(647757-648148)
chr3 (178-348)||(83346-83516)
chr3 (155-319)||(44648319-44648484)
chr3 (158-348)||(44854365-44854554)
chr3 (158-319)||(25061775-25061934)
chr3 (173-319)||(27483120-27483266)
chr3 (208-348)||(37225557-37225697)
chr3 (164-348)||(46362928-46363112)
chr3 (161-316)||(2567927-2568082)
chr3 (157-319)||(31290885-31291046)
chr3 (173-297)||(38165588-38165712)
chr3 (218-346)||(38457513-38457641)
chr3 (158-348)||(27027784-27027975)
chr3 (156-345)||(4391958-4392138)
chr3 (158-319)||(26965420-26965581)
chr3 (187-348)||(43580527-43580691)
chr3 (165-319)||(1340850-1341002)
chr3 (201-316)||(2662447-2662562)
chr3 (1-136)||(53496948-53497083)
chr3 (197-319)||(36771527-36771649)
chr3 (158-344)||(27039382-27039566)
chr3 (157-319)||(40048956-40049116)
chr3 (158-319)||(16240656-16240808)
chr3 (158-348)||(54933115-54933307)
chr3 (163-345)||(35099292-35099465)
chr3 (218-319)||(790152-790253)
chr3 (222-319)||(35239441-35239538)
chr3 (158-299)||(43736783-43736922)
chr3 (158-348)||(54261466-54261658)
chr3 (218-346)||(5244638-5244765)
chr3 (157-319)||(42791383-42791538)
chr3 (158-313)||(51381812-51381967)
chr3 (222-348)||(41287129-41287255)
chr3 (168-342)||(25722381-25722557)
chr3 (158-319)||(42740303-42740463)
chr3 (244-320)||(19552610-19552686)
chr3 (1-132)||(27941130-27941261)
chr3 (155-348)||(32303812-32304007)
chr3 (244-348)||(2988606-2988712)
chr3 (1-135)||(2615410-2615544)
chr3 (165-348)||(43687800-43687985)
chr3 (1-139)||(55199424-55199562)
chr3 (158-319)||(4476274-4476433)
chr3 (208-348)||(22730976-22731122)
chr3 (158-289)||(45095638-45095771)
chr3 (208-319)||(53716085-53716194)
chr3 (158-345)||(3000807-3000984)
chr3 (158-345)||(15514647-15514824)
chr3 (198-319)||(34059947-34060066)
chr3 (165-348)||(53560715-53560900)
chr3 (158-348)||(20512406-20512598)
chr3 (164-269)||(43599466-43599571)
chr3 (258-348)||(44645389-44645481)
chr3 (11-118)||(42340423-42340530)
chr3 (165-257)||(42857010-42857102)
chr3 (206-348)||(43600150-43600293)
chr3 (468-520)||(49864793-49864845)
chr3 (244-348)||(43169385-43169491)
chr3 (218-319)||(9167661-9167759)
chr3 (278-348)||(50420309-50420379)
chr3 (208-348)||(22414807-22414944)
chr3 (244-348)||(36541542-36541648)
chr3 (258-343)||(42007072-42007159)
chr3 (1-139)||(46007214-46007353)
chr3 (472-519)||(33761017-33761064)
chr3 (1-139)||(48227326-48227464)
chr3 (478-519)||(39555245-39555286)
chr3 (271-319)||(43599855-43599903)
chr3 (479-520)||(28405064-28405105)
chr3 (468-520)||(11150085-11150137)
chr3 (468-520)||(12830520-12830572)
chr3 (158-230)||(35557662-35557734)
chr3 (488-520)||(51380383-51380415)
chr3 (158-230)||(51398179-51398251)
chr3 (157-212)||(52222761-52222816)
chr3 (268-331)||(49470857-49470922)
chr3 (470-519)||(17229086-17229135)
[»] chr1 (71 HSPs)
chr1 (157-348)||(28751319-28751510)
chr1 (157-319)||(48259774-48259936)
chr1 (165-348)||(5317496-5317679)
chr1 (161-348)||(17919736-17919922)
chr1 (158-316)||(84430-84588)
chr1 (170-348)||(12002296-12002474)
chr1 (158-319)||(24040936-24041097)
chr1 (169-348)||(15698673-15698853)
chr1 (158-331)||(50349769-50349948)
chr1 (161-316)||(37437319-37437474)
chr1 (1-136)||(44527169-44527304)
chr1 (158-344)||(6332221-6332406)
chr1 (158-348)||(2459058-2459246)
chr1 (218-348)||(11650108-11650238)
chr1 (165-319)||(30006209-30006363)
chr1 (218-344)||(1428920-1429047)
chr1 (218-349)||(43929734-43929864)
chr1 (1-139)||(48166150-48166288)
chr1 (163-348)||(40719065-40719250)
chr1 (218-319)||(43105574-43105675)
chr1 (218-347)||(52403527-52403656)
chr1 (157-301)||(45749410-45749554)
chr1 (199-342)||(44583828-44583970)
chr1 (170-348)||(672206-672383)
chr1 (1-139)||(25682564-25682702)
chr1 (165-319)||(43755107-43755260)
chr1 (218-344)||(2245840-2245968)
chr1 (199-319)||(10690908-10691028)
chr1 (244-348)||(26252168-26252274)
chr1 (196-319)||(40060856-40060979)
chr1 (198-319)||(1430488-1430610)
chr1 (1-139)||(48949860-48949998)
chr1 (158-320)||(49894860-49895022)
chr1 (1-131)||(52109375-52109505)
chr1 (259-348)||(44582791-44582882)
chr1 (244-348)||(254909-255015)
chr1 (165-300)||(48319924-48320055)
chr1 (244-348)||(22664989-22665091)
chr1 (244-348)||(28200220-28200326)
chr1 (165-347)||(5854143-5854327)
chr1 (208-344)||(43738216-43738352)
chr1 (158-345)||(12851794-12851972)
chr1 (1-139)||(36733609-36733747)
chr1 (165-331)||(6377205-6377361)
chr1 (1-139)||(51113228-51113366)
chr1 (263-348)||(17806392-17806477)
chr1 (17-136)||(4395075-4395194)
chr1 (158-345)||(45377071-45377249)
chr1 (18-139)||(24538423-24538544)
chr1 (244-348)||(42650247-42650352)
chr1 (259-316)||(9552368-9552425)
chr1 (158-347)||(11134372-11134563)
chr1 (1-136)||(16816936-16817070)
chr1 (158-345)||(15646985-15647162)
chr1 (244-348)||(44024595-44024701)
chr1 (468-520)||(24059890-24059942)
chr1 (1-139)||(5609252-5609390)
chr1 (245-303)||(38132189-38132247)
chr1 (158-303)||(50591230-50591375)
chr1 (158-226)||(49468621-49468689)
chr1 (220-291)||(48173428-48173499)
chr1 (470-520)||(1060315-1060365)
chr1 (411-445)||(5463530-5463564)
chr1 (158-220)||(10842959-10843021)
chr1 (470-520)||(33299706-33299756)
chr1 (261-303)||(35149394-35149436)
chr1 (470-520)||(45563670-45563720)
chr1 (470-520)||(49291967-49292017)
chr1 (158-215)||(5463759-5463816)
chr1 (165-226)||(48009183-48009244)
chr1 (158-215)||(49426329-49426386)
[»] chr6 (30 HSPs)
chr6 (158-348)||(12828592-12828783)
chr6 (157-348)||(31275552-31275743)
chr6 (199-348)||(29927258-29927407)
chr6 (218-348)||(29915592-29915723)
chr6 (1-139)||(15606130-15606268)
chr6 (198-346)||(26669050-26669198)
chr6 (1-136)||(15053311-15053446)
chr6 (218-348)||(23936555-23936684)
chr6 (1-135)||(14680076-14680213)
chr6 (1-132)||(28107059-28107190)
chr6 (213-348)||(11785069-11785205)
chr6 (244-348)||(17345132-17345238)
chr6 (165-344)||(30627145-30627315)
chr6 (208-319)||(1924636-1924747)
chr6 (225-344)||(4123835-4123953)
chr6 (245-344)||(10494760-10494860)
chr6 (260-348)||(34576594-34576684)
chr6 (258-348)||(26189558-26189651)
chr6 (208-317)||(34439370-34439480)
chr6 (199-328)||(4131901-4132027)
chr6 (183-345)||(8052397-8052550)
chr6 (161-348)||(25932679-25932868)
chr6 (11-107)||(29368202-29368296)
chr6 (1-75)||(30802127-30802201)
chr6 (193-293)||(6992508-6992608)
chr6 (4-64)||(11731806-11731865)
chr6 (470-520)||(26542507-26542557)
chr6 (260-348)||(6140649-6140739)
chr6 (410-445)||(12828847-12828882)
chr6 (479-520)||(27841034-27841075)
[»] chr5 (65 HSPs)
chr5 (158-348)||(166561-166751)
chr5 (157-348)||(36660478-36660667)
chr5 (165-348)||(36783406-36783589)
chr5 (168-348)||(4751452-4751632)
chr5 (158-303)||(43257773-43257917)
chr5 (168-348)||(4742188-4742368)
chr5 (165-319)||(12167529-12167684)
chr5 (157-345)||(38982065-38982244)
chr5 (164-348)||(42329462-42329648)
chr5 (165-319)||(8960954-8961107)
chr5 (1-139)||(12660229-12660367)
chr5 (1-139)||(22767393-22767531)
chr5 (169-287)||(34919847-34919965)
chr5 (158-303)||(14979963-14980108)
chr5 (1-120)||(4268031-4268150)
chr5 (158-343)||(4371419-4371591)
chr5 (244-347)||(34171215-34171318)
chr5 (165-348)||(39059856-39060034)
chr5 (199-319)||(31889799-31889919)
chr5 (1-139)||(11375649-11375787)
chr5 (1-139)||(15988885-15989023)
chr5 (208-314)||(31557302-31557409)
chr5 (152-301)||(4967397-4967546)
chr5 (1-134)||(30222935-30223068)
chr5 (158-319)||(33693811-33693971)
chr5 (158-344)||(33822413-33822601)
chr5 (1-135)||(25730725-25730859)
chr5 (11-139)||(27533052-27533181)
chr5 (157-348)||(15400222-15400414)
chr5 (244-348)||(793602-793708)
chr5 (217-319)||(7388163-7388263)
chr5 (183-319)||(16886156-16886285)
chr5 (1-139)||(20204868-20205006)
chr5 (157-344)||(27652230-27652419)
chr5 (157-348)||(29653423-29653616)
chr5 (199-303)||(1513075-1513179)
chr5 (1-139)||(8387999-8388137)
chr5 (160-258)||(24436454-24436552)
chr5 (1-139)||(26597593-26597731)
chr5 (272-348)||(4833657-4833735)
chr5 (244-348)||(33584971-33585077)
chr5 (185-347)||(12992114-12992267)
chr5 (185-347)||(13066765-13066918)
chr5 (259-348)||(29044770-29044860)
chr5 (267-348)||(33741516-33741597)
chr5 (1-132)||(27292354-27292485)
chr5 (268-344)||(32690753-32690829)
chr5 (244-319)||(4011658-4011733)
chr5 (217-270)||(17674329-17674382)
chr5 (272-345)||(28640136-28640209)
chr5 (237-344)||(27810401-27810509)
chr5 (260-343)||(32963022-32963106)
chr5 (244-303)||(36296130-36296189)
chr5 (48-139)||(41940920-41941011)
chr5 (470-520)||(29930719-29930769)
chr5 (470-520)||(32125503-32125553)
chr5 (217-278)||(8755590-8755651)
chr5 (158-303)||(41566880-41567015)
chr5 (158-226)||(42661852-42661920)
chr5 (158-220)||(2729698-2729760)
chr5 (478-520)||(19131319-19131361)
chr5 (470-520)||(19459652-19459702)
chr5 (470-520)||(32201550-32201600)
chr5 (468-520)||(16159330-16159380)
chr5 (158-215)||(42103975-42104032)
[»] chr2 (55 HSPs)
chr2 (163-319)||(34225829-34225985)
chr2 (158-348)||(7743451-7743641)
chr2 (158-345)||(24775242-24775429)
chr2 (165-319)||(14378167-14378321)
chr2 (158-319)||(40987194-40987353)
chr2 (193-344)||(36360322-36360471)
chr2 (218-348)||(37106912-37107044)
chr2 (183-319)||(29795136-29795272)
chr2 (1-139)||(88472-88610)
chr2 (208-343)||(1298742-1298877)
chr2 (218-348)||(4840699-4840829)
chr2 (158-348)||(43388569-43388759)
chr2 (217-348)||(43344194-43344325)
chr2 (242-348)||(43460823-43460929)
chr2 (221-319)||(1381820-1381916)
chr2 (1-139)||(12130774-12130912)
chr2 (158-319)||(42969969-42970129)
chr2 (1-139)||(34696040-34696176)
chr2 (1-139)||(34718452-34718588)
chr2 (199-319)||(40410522-40410642)
chr2 (217-319)||(4766183-4766285)
chr2 (158-345)||(4536627-4536802)
chr2 (187-348)||(775825-775988)
chr2 (244-348)||(16316759-16316863)
chr2 (155-348)||(25332620-25332815)
chr2 (244-348)||(41984468-41984575)
chr2 (148-348)||(10580758-10580960)
chr2 (1-132)||(18345623-18345753)
chr2 (258-348)||(2459823-2459915)
chr2 (1-117)||(44017454-44017570)
chr2 (269-345)||(1360230-1360306)
chr2 (157-313)||(14698075-14698231)
chr2 (244-348)||(39866669-39866775)
chr2 (258-348)||(33093418-33093510)
chr2 (222-347)||(11171792-11171919)
chr2 (3-107)||(26198638-26198742)
chr2 (150-220)||(29396584-29396654)
chr2 (244-313)||(4566119-4566188)
chr2 (470-519)||(11476268-11476317)
chr2 (165-253)||(6592101-6592189)
chr2 (158-214)||(38809883-38809939)
chr2 (269-343)||(14511515-14511589)
chr2 (158-215)||(441143-441200)
chr2 (165-220)||(32227930-32227985)
chr2 (410-445)||(43388820-43388855)
chr2 (1-71)||(9709910-9709980)
chr2 (158-220)||(29808992-29809054)
chr2 (470-520)||(43973415-43973465)
chr2 (158-215)||(4133206-4133263)
chr2 (479-520)||(6128160-6128201)
chr2 (157-226)||(8789341-8789410)
chr2 (470-519)||(40896186-40896235)
chr2 (470-519)||(42714256-42714305)
chr2 (157-226)||(45081817-45081886)
chr2 (252-316)||(45147982-45148047)
[»] chr7 (60 HSPs)
chr7 (158-348)||(42259461-42259651)
chr7 (218-348)||(3680895-3681025)
chr7 (163-319)||(33056201-33056358)
chr7 (159-349)||(17869287-17869477)
chr7 (158-345)||(40298901-40299079)
chr7 (158-348)||(10684741-10684933)
chr7 (200-348)||(34733362-34733508)
chr7 (169-319)||(42121622-42121772)
chr7 (158-331)||(48838592-48838770)
chr7 (199-348)||(34002085-34002235)
chr7 (199-348)||(41905888-41906036)
chr7 (208-319)||(22627316-22627427)
chr7 (202-348)||(1103535-1103681)
chr7 (165-303)||(32275291-32275429)
chr7 (1-139)||(9328738-9328875)
chr7 (1-139)||(16731846-16731984)
chr7 (1-139)||(17709980-17710118)
chr7 (198-319)||(18886725-18886846)
chr7 (192-331)||(47272219-47272358)
chr7 (158-348)||(32345746-32345938)
chr7 (208-316)||(28044103-28044211)
chr7 (158-303)||(40207299-40207447)
chr7 (157-343)||(5723058-5723228)
chr7 (1-132)||(16098410-16098541)
chr7 (224-319)||(42010553-42010648)
chr7 (158-348)||(19906465-19906655)
chr7 (158-348)||(26963530-26963722)
chr7 (158-344)||(19920195-19920370)
chr7 (13-139)||(22289154-22289280)
chr7 (218-348)||(26527370-26527499)
chr7 (158-344)||(30833007-30833192)
chr7 (244-348)||(39117486-39117591)
chr7 (158-313)||(6521905-6522060)
chr7 (218-345)||(33845391-33845509)
chr7 (259-348)||(31416763-31416854)
chr7 (243-319)||(36447608-36447684)
chr7 (8-116)||(29201098-29201208)
chr7 (260-348)||(36447083-36447173)
chr7 (82-139)||(1581528-1581585)
chr7 (157-248)||(18733585-18733676)
chr7 (1-139)||(30493746-30493883)
chr7 (1-139)||(17877321-17877459)
chr7 (470-520)||(41161283-41161333)
chr7 (258-303)||(19277057-19277102)
chr7 (278-348)||(42044010-42044082)
chr7 (470-519)||(44699236-44699285)
chr7 (468-520)||(39390663-39390715)
chr7 (470-520)||(38603876-38603926)
chr7 (157-211)||(40339646-40339700)
chr7 (271-348)||(18733506-18733583)
chr7 (158-215)||(22298185-22298242)
chr7 (158-215)||(27935951-27936008)
chr7 (258-348)||(30515024-30515116)
chr7 (156-220)||(7795151-7795215)
chr7 (476-515)||(15314619-15314658)
chr7 (158-220)||(29530845-29530907)
chr7 (158-215)||(1742175-1742232)
chr7 (158-215)||(23155372-23155429)
chr7 (24-125)||(34578437-34578538)
chr7 (260-313)||(36836146-36836199)
[»] scaffold0072 (1 HSPs)
scaffold0072 (157-319)||(11993-12154)
[»] chr8 (58 HSPs)
chr8 (168-348)||(22601185-22601365)
chr8 (157-349)||(32326636-32326828)
chr8 (158-348)||(9022445-9022636)
chr8 (158-348)||(27109732-27109923)
chr8 (198-348)||(7612548-7612697)
chr8 (157-303)||(38328966-38329111)
chr8 (158-348)||(36915417-36915605)
chr8 (158-319)||(41790052-41790214)
chr8 (187-320)||(45187237-45187368)
chr8 (215-348)||(30788985-30789118)
chr8 (152-319)||(6839286-6839453)
chr8 (158-319)||(41414912-41415072)
chr8 (157-344)||(8382398-8382576)
chr8 (1-136)||(23853848-23853983)
chr8 (244-348)||(14541744-14541848)
chr8 (1-139)||(8451259-8451397)
chr8 (218-348)||(11257590-11257719)
chr8 (1-131)||(13414944-13415074)
chr8 (157-348)||(34461493-34461686)
chr8 (173-319)||(39970404-39970541)
chr8 (208-348)||(5588430-5588576)
chr8 (230-319)||(16209020-16209109)
chr8 (193-345)||(32661358-32661501)
chr8 (1-132)||(478192-478323)
chr8 (158-319)||(2803167-2803319)
chr8 (232-348)||(5044213-5044329)
chr8 (158-313)||(8471344-8471499)
chr8 (183-345)||(3095450-3095603)
chr8 (237-319)||(18666536-18666618)
chr8 (218-319)||(2067779-2067880)
chr8 (158-314)||(34168124-34168280)
chr8 (224-319)||(7129356-7129451)
chr8 (260-319)||(11336047-11336106)
chr8 (5-76)||(40588870-40588941)
chr8 (237-319)||(29931232-29931314)
chr8 (183-320)||(2812864-2812991)
chr8 (244-346)||(27416551-27416657)
chr8 (1-139)||(7127136-7127274)
chr8 (244-348)||(13109037-13109143)
chr8 (218-344)||(32737820-32737945)
chr8 (260-320)||(1774085-1774143)
chr8 (158-258)||(8106800-8106900)
chr8 (468-515)||(13343591-13343638)
chr8 (244-348)||(18673097-18673202)
chr8 (158-216)||(4530049-4530107)
chr8 (260-319)||(26439045-26439102)
chr8 (208-318)||(156309-156410)
chr8 (470-520)||(10011230-10011280)
chr8 (470-520)||(36396766-36396816)
chr8 (470-520)||(42586713-42586763)
chr8 (193-253)||(37185609-37185669)
chr8 (17-133)||(37711998-37712114)
chr8 (415-445)||(515112-515142)
chr8 (158-220)||(4760471-4760533)
chr8 (269-331)||(43938188-43938250)
chr8 (410-443)||(36669891-36669924)
chr8 (158-215)||(39463441-39463498)
chr8 (287-340)||(42946180-42946233)
[»] chr4 (86 HSPs)
chr4 (160-344)||(34096067-34096251)
chr4 (161-319)||(34360081-34360239)
chr4 (157-345)||(42672439-42672627)
chr4 (158-319)||(36805366-36805526)
chr4 (211-348)||(37445707-37445844)
chr4 (173-348)||(30022115-30022289)
chr4 (158-341)||(44855298-44855481)
chr4 (208-348)||(19849131-19849271)
chr4 (157-348)||(22212388-22212579)
chr4 (1-139)||(18442281-18442419)
chr4 (165-319)||(32140908-32141062)
chr4 (222-348)||(45520437-45520563)
chr4 (218-319)||(15501129-15501230)
chr4 (158-348)||(47321192-47321384)
chr4 (200-319)||(21045209-21045328)
chr4 (1-139)||(49951226-49951364)
chr4 (1-139)||(51735107-51735245)
chr4 (218-319)||(52732667-52732768)
chr4 (158-345)||(30492778-30492957)
chr4 (1-139)||(28537923-28538059)
chr4 (165-348)||(17499637-17499822)
chr4 (13-139)||(32577196-32577321)
chr4 (157-348)||(45889610-45889803)
chr4 (158-348)||(24259658-24259850)
chr4 (218-319)||(39671081-39671182)
chr4 (161-348)||(31987351-31987529)
chr4 (165-344)||(54092009-54092179)
chr4 (158-319)||(56556194-56556352)
chr4 (165-348)||(34124342-34124527)
chr4 (158-316)||(43421039-43421197)
chr4 (1-139)||(55734922-55735060)
chr4 (158-348)||(28116292-28116484)
chr4 (218-319)||(51930652-51930753)
chr4 (161-269)||(32140794-32140902)
chr4 (158-253)||(29840197-29840292)
chr4 (1-139)||(41835447-41835585)
chr4 (1-139)||(29655802-29655939)
chr4 (1-133)||(21321446-21321578)
chr4 (1-132)||(2064773-2064904)
chr4 (242-348)||(35928538-35928642)
chr4 (1-139)||(37245988-37246126)
chr4 (258-349)||(51434270-51434363)
chr4 (157-319)||(54512099-54512261)
chr4 (258-348)||(31941605-31941697)
chr4 (14-139)||(43840456-43840581)
chr4 (218-348)||(29289863-29289995)
chr4 (218-319)||(31817174-31817276)
chr4 (1-127)||(56065554-56065680)
chr4 (208-344)||(38761791-38761925)
chr4 (158-290)||(51737237-51737367)
chr4 (158-348)||(55126544-55126736)
chr4 (16-139)||(51259681-51259804)
chr4 (1-139)||(28426109-28426234)
chr4 (1-139)||(49119536-49119661)
chr4 (259-313)||(54233900-54233954)
chr4 (199-344)||(17317803-17317943)
chr4 (199-300)||(56422955-56423056)
chr4 (244-348)||(4408176-4408282)
chr4 (208-314)||(11835186-11835291)
chr4 (185-319)||(38692466-38692591)
chr4 (222-331)||(3093413-3093521)
chr4 (260-344)||(6510169-6510253)
chr4 (218-319)||(50072333-50072428)
chr4 (158-299)||(6462112-6462253)
chr4 (158-348)||(19282323-19282514)
chr4 (479-520)||(30106198-30106239)
chr4 (159-220)||(49080394-49080455)
chr4 (184-303)||(45049801-45049910)
chr4 (157-220)||(2493281-2493344)
chr4 (158-220)||(37654589-37654651)
chr4 (470-520)||(54178399-54178449)
chr4 (158-215)||(2728314-2728371)
chr4 (468-520)||(16590339-16590391)
chr4 (264-303)||(34534111-34534151)
chr4 (410-445)||(52253799-52253834)
chr4 (470-520)||(22523424-22523474)
chr4 (470-516)||(42932359-42932405)
chr4 (165-215)||(52957713-52957763)
chr4 (158-220)||(53814413-53814475)
chr4 (158-204)||(54042098-54042144)
chr4 (479-520)||(9392614-9392655)
chr4 (479-520)||(21295013-21295054)
chr4 (479-520)||(33634713-33634754)
chr4 (165-226)||(34316393-34316454)
chr4 (471-520)||(42890351-42890400)
chr4 (479-520)||(53258740-53258781)
[»] scaffold0119 (1 HSPs)
scaffold0119 (198-346)||(1595-1743)
[»] scaffold0238 (1 HSPs)
scaffold0238 (217-348)||(16011-16141)
[»] scaffold0886 (1 HSPs)
scaffold0886 (218-348)||(4080-4211)
[»] scaffold0007 (1 HSPs)
scaffold0007 (157-344)||(158154-158330)
[»] scaffold0189 (1 HSPs)
scaffold0189 (194-345)||(13016-13158)
[»] scaffold0047 (1 HSPs)
scaffold0047 (244-348)||(70451-70557)
[»] scaffold0580 (2 HSPs)
scaffold0580 (158-282)||(1690-1814)
scaffold0580 (158-282)||(9429-9553)
[»] scaffold0003 (1 HSPs)
scaffold0003 (244-348)||(321776-321882)
[»] scaffold0060 (1 HSPs)
scaffold0060 (165-256)||(31686-31777)
[»] scaffold0519 (1 HSPs)
scaffold0519 (278-348)||(7732-7802)
[»] scaffold0446 (1 HSPs)
scaffold0446 (1-127)||(111-237)
[»] scaffold0015 (1 HSPs)
scaffold0015 (158-226)||(20993-21061)
[»] scaffold0571 (1 HSPs)
scaffold0571 (478-519)||(9311-9352)
[»] scaffold0565 (1 HSPs)
scaffold0565 (158-215)||(9572-9629)


Alignment Details
Target: chr3 (Bit Score: 264; Significance: 1e-147; HSPs: 78)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 1 - 348
Target Start/End: Original strand, 647347 - 647694
Alignment:
Q  1 gtaaggctgctgcctccccctccaaaactgtcatattaacccgctgccatttcatttgagcccgaaaaaattgcctagagaagtctctaacacaacacgc 100  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  647347 gtaaggctgctgcctccccctccataactgtcatattagcccgctgccatttcgtttgagcccggaaaaattgcctagagaagtctctaacacaacacgc 647446  T
Q  101 aaaagatataatatggttacggtcatggaacgcggcatcaaaagatgtaatatgtgttactccatccgtttcaaaataagtatcgttttacccaattgca 200  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| || |||||||||||||| ||||||||||||||||||    
T  647447 aaaagatgtaatatggttacgctcatggaacgcggcatcaaaagatgtaatatatgttactccctcggtttcaaaataagtgtcgttttacccaattgca 647546  T
Q  201 cacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaa 300  Q
    |||||| |||| ||| ||||||||||||||||| | |||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  647547 cacagattaagaaatgaaatgaaataatcattagatataacagttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaa 647646  T
Q  301 attccgtgagagaaaagttatagtatttattaagggtaaagttggaag 348  Q
    |||| || |||||||||||| |||||||||| ||||||||||||||||    
T  647647 attctgtaagagaaaagttagagtatttattgagggtaaagttggaag 647694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 413 - 821
Target Start/End: Original strand, 647757 - 648148
Alignment:
Q  413 taaaatgacattcattttgaaacggagggagtaccttcttgtatttgnnnnnnnntggattttggaaaaagctattcctaatagcttttcattttagagt 512  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||        |||||||||||||||||| | ||||||||||||||||||||||||    
T  647757 taaagtgacactcattttgaaacggagggagtaccttcttgtatttgaaaaaaaatggattttggaaaaagctgtccctaatagcttttcattttagagt 647856  T
Q  513 caaaatagnnnnnnn--ataaaatgatttttctaaacaaacacttaaaatgataagtgattattttttgaattattttgaaacaaacgggtaattcatca 610  Q
    ||||||||         |||||||||||||||||||||||         ||| |||||||||||||||          ||||||||||||||||||||||    
T  647857 caaaatagtttttttttataaaatgatttttctaaacaaa---------tgacaagtgattatttttt----------gaaacaaacgggtaattcatca 647937  T
Q  611 ctccttttctgattctcttcaaattttccaatacttgaaactcaaaacctctcaatttttcaacctttttctcaaaattaccaactttgattatgcataa 710  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  647938 ctccttttctgattctcttcaaattttccaatacttgaaactcaaaacctctcaatttttcaacctttttctcaaaattaccaactttgattatgcataa 648037  T
Q  711 tttcaagtcaagctacactcatgatttttctagcaccaagttctacatcatgtcctgcttctgtttcgtcgctgtcaccaagttctgtaccggttcccaa 810  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  648038 tttcaagtcaagctacactcatgatttttctagcaccaagttctacatcaggtcctgcttctgtttggtcgctgtcaccaagttctgtaccggttcccaa 648137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 115; E-Value: 6e-58
Query Start/End: Original strand, 178 - 348
Target Start/End: Complemental strand, 83516 - 83346
Alignment:
Q  178 aagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaag 277  Q
    |||| |||||||| ||||||||||||| | |||||||| ||||||| ||||||||| ||| || |||||||||||||| |||||||||||||||||||||    
T  83516 aagtgtcgttttagccaattgcacacaaattaaggaatgaaatgaattaatcattagacacaacacttttactaaactacccttactttataagaaaaag 83417  T
Q  278 acaaacttaaagttgcattgaaaattccgtgagagaaaagttatagtatttattaagggtaaagttggaag 348  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||||||| | ||||||||||||||||    
T  83416 acaaacttaaagttgcattgaaaattgcgtgagagaaaagttagagtatttaatgagggtaaagttggaag 83346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 155 - 319
Target Start/End: Original strand, 44648319 - 44648484
Alignment:
Q  155 tgttactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaac 254  Q
    ||||||||| ||||||||||||| ||| |||||||| ||||||||||||||| |||||||| ||||||||||||||||| |||||| |||||||||||||    
T  44648319 tgttactccctccgtttcaaaatgagtgtcgttttagccaattgcacacagattaaggaatgaaatgaaataatcattagacataacacttttactaaac 44648418  T
Q  255 tgcccttactttataag-aaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagtt 319  Q
    |||| ||||||||| || ||||||||||||||||||||| ||||||||||  |||||| |||||||    
T  44648419 tgcctttactttatgagaaaaaagacaaacttaaagttgaattgaaaattgtgtgagaaaaaagtt 44648484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 158 - 348
Target Start/End: Complemental strand, 44854554 - 44854365
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgc 257  Q
    |||||||||||||||||||| | | |||||||| ||||||||||| ||| ||| ||||  |||||||||||||||| |||  | ||||||||||||||||    
T  44854554 tactccatccgtttcaaaatgattgtcgttttagccaattgcacatagattaatgaattgaatgaaataatcattagaca--acacttttactaaactgc 44854457  T
Q  258 ccttactttataagaaaaagacaaacttaaagttgcattgaaaatt-ccgtgagagaaaagttatagtatttattaagggtaaagttggaag 348  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||    |||||||||||||  |||||||||| |||||||| |||||||    
T  44854456 ccttactttataagaaaaatacaaacttaaagttgcattgaaaattgtactgagagaaaagttggagtatttattgagggtaaaattggaag 44854365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 158 - 319
Target Start/End: Complemental strand, 25061934 - 25061775
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgc 257  Q
    |||||||||||||| ||||| ||| |||||||| || |||||||||| | |||||||| ||||||||||||||||| |||||| |||||||||||||| |    
T  25061934 tactccatccgtttaaaaatgagtgtcgttttagccgattgcacacatattaaggaatgaaatgaaataatcattagacataacacttttactaaactac 25061835  T
Q  258 ccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagtt 319  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||   |||||||||||||    
T  25061834 ccttactttataagaaaa--acaaacttaaagttgcattgaaaattgtatgagagaaaagtt 25061775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 173 - 319
Target Start/End: Original strand, 27483120 - 27483266
Alignment:
Q  173 aaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttactttataaga 272  Q
    ||||| ||| ||| |||| || |||||||||| | |||||||| ||||||||||||||||| |||||| |||||||||||| | ||||||||||||||||    
T  27483120 aaaatgagtgtcgctttagcccattgcacacaaattaaggaatgaaatgaaataatcattagacataacacttttactaaatttcccttactttataaga 27483219  T
Q  273 aaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagtt 319  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||    
T  27483220 aaaagacaaacttaaagttgcattgaaaattatgtgagagaaaagtt 27483266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 208 - 348
Target Start/End: Original strand, 37225557 - 37225697
Alignment:
Q  208 taaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgt 307  Q
    |||| |||| |||||||||||||||  | |||| ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||  ||    
T  37225557 taagaaatacaatgaaataatcattggatataatacttttactaaactgtccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgt 37225656  T
Q  308 gagagaaaagttatagtatttattaagggtaaagttggaag 348  Q
    |||||||||||||  ||||||||| ||||||||||||||||    
T  37225657 gagagaaaagttagcgtatttattgagggtaaagttggaag 37225697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 164 - 348
Target Start/End: Original strand, 46362928 - 46363112
Alignment:
Q  164 atccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttac 263  Q
    |||| ||||||||| ||| |||||| | |  |||||||||| | ||||||||  |||||||||||||||| || ||| | ||||||||||||| ||||||    
T  46362928 atccatttcaaaatgagtgtcgtttcagcgtattgcacacatattaaggaattgaatgaaataatcattagacctaacatttttactaaactgtccttac 46363027  T
Q  264 tttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagttatagtatttattaagggtaaagttggaag 348  Q
    ||||||||||||| ||||| |||||||||||||| |||||  ||||||||||||||  |||||||||| ||||||||||||||||    
T  46363028 tttataagaaaaatacaaatttaaagttgcattgtaaattgtgtgagagaaaagttggagtatttattgagggtaaagttggaag 46363112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 161 - 316
Target Start/End: Original strand, 2567927 - 2568082
Alignment:
Q  161 tccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgccct 260  Q
    ||||||||||| ||||| | | |||||||| ||||||||||| ||| ||||||||  |||||||||||||||| | |||| |||||||| ||| || |||    
T  2567927 tccatccgttttaaaatgaatgtcgttttagccaattgcacatagattaaggaattgaatgaaataatcattagatataacacttttacaaaaatgtcct 2568026  T
Q  261 tactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaa 316  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  2568027 tactttataagaaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaa 2568082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 157 - 319
Target Start/End: Original strand, 31290885 - 31291046
Alignment:
Q  157 ttactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactg 256  Q
    ||||||| ||||||| ||||| ||| |||||||| |||||| |||||||| |||||||| |||||||||||| |||| |||||| |||||||||||||||    
T  31290885 ttactccctccgttttaaaatgagtgtcgttttagccaattacacacagattaaggaatgaaatgaaataattattagacataacacttttactaaactg 31290984  T
Q  257 cccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagtt 319  Q
    || ||| ||||| ||||||||| ||||||||||||||| ||||||||  ||||||||||||||    
T  31290985 cctttattttattagaaaaaga-aaacttaaagttgcaatgaaaattgtgtgagagaaaagtt 31291046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 173 - 297
Target Start/End: Original strand, 38165588 - 38165712
Alignment:
Q  173 aaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttactttataaga 272  Q
    ||||| ||| ||||||||  |||||||| ||||| ||||||||  ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  38165588 aaaatgagtgtcgttttagtcaattgcatacagattaaggaatgtaatgaaataatcattaaacataacacttttactaaactgtccttactttataaga 38165687  T
Q  273 aaaagacaaacttaaagttgcattg 297  Q
    |||||||||||||||||||||||||    
T  38165688 aaaagacaaacttaaagttgcattg 38165712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 218 - 346
Target Start/End: Complemental strand, 38457641 - 38457513
Alignment:
Q  218 aatgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaag 317  Q
    |||||||||||||||| |||||| ||||||||||||||||| ||||||||| ||||||||| ||||||||| ||||||||||||||  ||||||||||||    
T  38457641 aatgaaataatcattacacataacacttttactaaactgccattactttattagaaaaagataaacttaaaattgcattgaaaattgtgtgagagaaaag 38457542  T
Q  318 ttatagtatttattaagggtaaagttgga 346  Q
    ||  |||||||||| ||||||||||||||    
T  38457541 ttggagtatttattgagggtaaagttgga 38457513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 158 - 348
Target Start/End: Complemental strand, 27027975 - 27027784
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgc 257  Q
    |||||||||||||||||| ||||| |||||||| ||||||||||||| | |||| |||  |||||||  |||||||||||||| ||||||| |||| ||     
T  27027975 tactccatccgtttcaaa-taagtgtcgttttaaccaattgcacacatattaagtaatggaatgaaa--atcattaaacataacacttttaataaagtgt 27027879  T
Q  258 ccttactttataagaaaaa----gacaaacttaaagttgcattgaaaattccgtgagagaaaagttatagtatttattaagggtaaagttggaag 348  Q
    ||||||||||||| |||||    |||||| ||||||||||||||||||||  ||||||||||||||  |||||||||||||| ||||||| ||||    
T  27027878 ccttactttataaaaaaaaaaaagacaaatttaaagttgcattgaaaattgtgtgagagaaaagttggagtatttattaaggataaagtttgaag 27027784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 156 - 345
Target Start/End: Complemental strand, 4392138 - 4391958
Alignment:
Q  156 gttactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaact 255  Q
    |||||||| ||||||||||||| ||| |||||||  ||||||||| ||| | |||| ||| |||||||||||| |||| |||||| ||||||||||||||    
T  4392138 gttactccctccgtttcaaaatgagtgtcgttttggccaattgcatacaaattaagaaatgaaatgaaataattattagacataacacttttactaaact 4392039  T
Q  256 gcccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagttatagtatttattaagggtaaagttgg 345  Q
    ||||         |||||||||||||||||||||||||||||||||||  | ||||||||||||  |||||||||| |||||||||||||    
T  4392038 gccc---------aagaaaaagacaaacttaaagttgcattgaaaattgtgcgagagaaaagttggagtatttattgagggtaaagttgg 4391958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 158 - 319
Target Start/End: Original strand, 26965420 - 26965581
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgc 257  Q
    |||||||||||||| ||||||||| ||  ||||  |  |  |||||||| |||| ||||||||||||||||||||  | ||||  |||||||||||||||    
T  26965420 tactccatccgttttaaaataagtgtcactttaggctttgacacacagattaagaaataaaatgaaataatcattggatataacgcttttactaaactgc 26965519  T
Q  258 ccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagtt 319  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||    
T  26965520 ccttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagagaaaagtt 26965581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 187 - 348
Target Start/End: Complemental strand, 43580691 - 43580527
Alignment:
Q  187 tttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttactt--tataagaaaaagacaaact 284  Q
    |||| ||||||||||||||| ||||||||| |||||||||||||||| | |||| | ||||||||||||||||||  ||  |||| |||||||||||| |    
T  43580691 tttagccaattgcacacagattaaggaatagaatgaaataatcattacatataacatttttactaaactgcccttgttttatatatgaaaaagacaaatt 43580592  T
Q  285 taaagttgcattgaaaattccgtgag-agaaaagttatagtatttattaagggtaaagttggaag 348  Q
    |||||||||||||||||||  ||||| | |||||||  |||||||||||||||||||||||||||    
T  43580591 taaagttgcattgaaaattgtgtgagaaaaaaagttggagtatttattaagggtaaagttggaag 43580527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 165 - 319
Target Start/End: Original strand, 1340850 - 1341002
Alignment:
Q  165 tccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttact 264  Q
    ||||||||||||| |  ||||||||| | ||||||||| ||| ||| ||||  ||||||||||| |||| |||||| |||||| ||||| || | |||||    
T  1340850 tccgtttcaaaatga--atcgttttagcaaattgcacatagattaaagaatggaatgaaataataattagacataacactttttctaaagtgtctttact 1340947  T
Q  265 ttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagtt 319  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  1340948 ttataagaaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtt 1341002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 201 - 316
Target Start/End: Original strand, 2662447 - 2662562
Alignment:
Q  201 cacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaa 300  Q
    |||||| ||| |||| ||||||||||||||||| |||||| |||||||||||| |||||||| ||||||||||||||||||| |||||||||||||||||    
T  2662447 cacagattaaagaatcaaatgaaataatcattagacataacacttttactaaattgcccttattttataagaaaaagacaaatttaaagttgcattgaaa 2662546  T
Q  301 attccgtgagagaaaa 316  Q
    |||  |||||||||||    
T  2662547 attgtgtgagagaaaa 2662562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 53497083 - 53496948
Alignment:
Q  1 gtaaggctgctgcctccccctccaaaactgtcatattaacccgctgccatttcatttgagcccgaaaaaattgcctagagaagtctctaacacaacacgc 100  Q
    |||||||| ||||||||||||| |||||||||| |||   |||||| |||||  |||||||||||| |||||||| | |  |||||||||||||||||||    
T  53497083 gtaaggctactgcctccccctcaaaaactgtcacatttgtccgctgtcattttgtttgagcccgaataaattgcccacaagagtctctaacacaacacgc 53496984  T
Q  101 aaaagatataatatggttacggtcatggaacgcggc 136  Q
    ||||||| ||||||||||||||||||||||||||||    
T  53496983 aaaagatgtaatatggttacggtcatggaacgcggc 53496948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 197 - 319
Target Start/End: Original strand, 36771527 - 36771649
Alignment:
Q  197 tgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcatt 296  Q
    |||||||| | |||| |||| ||||||||||| |||| |||||| | |||||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  36771527 tgcacacatattaagaaatataatgaaataattattagacataatatttttactaaactgctcttattttataagaaaaagacaaacttaaagttgcatt 36771626  T
Q  297 gaaaattccgtgagagaaaagtt 319  Q
    |||||||  ||||||||||||||    
T  36771627 gaaaattgtgtgagagaaaagtt 36771649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 158 - 344
Target Start/End: Complemental strand, 27039566 - 27039382
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgc 257  Q
    |||||||||||||||||| |  || |||||||| ||||||||||||| | |||| |||  |||||||  ||||||||| |||| |||||||||||| ||     
T  27039566 tactccatccgtttcaaa-tgggtgtcgttttaaccaattgcacacatattaagtaatggaatgaaa--atcattaaatataacacttttactaaagtgt 27039470  T
Q  258 ccttactttataagaaaaa-gacaaacttaaagttgcattgaaaattccgtgagagaaaagttatagtatttattaagggtaaagttg 344  Q
    ||||||||||||| ||||| |||||| ||||||||||||||||||||  ||||||| ||||||  |||||||||||||  ||||||||    
T  27039469 ccttactttataaaaaaaaagacaaatttaaagttgcattgaaaattgtgtgagaggaaagttggagtatttattaagaataaagttg 27039382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 157 - 319
Target Start/End: Complemental strand, 40049116 - 40048956
Alignment:
Q  157 ttactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactg 256  Q
    ||||||| ||||||| ||||| ||| ||| |||| | | ||||||||  | ||||||||  |||||||||||||||| |||||| ||||||| |||| ||    
T  40049116 ttactccctccgttttaaaattagtgtcgctttagctatttgcacacgaattaaggaatggaatgaaataatcattagacataacacttttattaaattg 40049017  T
Q  257 cccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagtt 319  Q
    || ||||||||||||||||||||||| ||||||||||||||||||||   |||||||||||||    
T  40049016 cctttactttataagaaaaagacaaatttaaagttgcattgaaaatt--atgagagaaaagtt 40048956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 158 - 319
Target Start/End: Complemental strand, 16240808 - 16240656
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgc 257  Q
    |||||||||||||||||||| ||| |||||||| || |||||||||| | || ||||| ||||||||||||||||| |||||| | ||||||||||| ||    
T  16240808 tactccatccgtttcaaaatgagtgtcgttttagcctattgcacacaaattagggaatgaaatgaaataatcattagacataacatttttactaaacagc 16240709  T
Q  258 ccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagtt 319  Q
    ||         |||||||||||||||||||||||||||||||||||  | ||||||||||||    
T  16240708 cc---------aagaaaaagacaaacttaaagttgcattgaaaattgtgcgagagaaaagtt 16240656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 158 - 348
Target Start/End: Original strand, 54933115 - 54933307
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgc 257  Q
    |||||||||||||| ||||| ||| ||| |||| ||||||||||| | | |||||||| |||| || || |||     ||||| | |||||||||| |      
T  54933115 tactccatccgttttaaaatgagtgtcgctttagccaattgcacatatattaaggaatgaaataaagtagtcaaatgtcataacaattttactaaaataa 54933214  T
Q  258 ccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgt--gagagaaaagttatagtatttattaagggtaaagttggaag 348  Q
    |||||||||||||||||| |||||||||||||||||||||||||||  ||  ||||||||||||  |||||||||| ||||||||||||||||    
T  54933215 ccttactttataagaaaatgacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgagggtaaagttggaag 54933307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 163 - 345
Target Start/End: Original strand, 35099292 - 35099465
Alignment:
Q  163 catccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgccctta 262  Q
    ||||||||| |||||  || |||||||| | ||||||||||| | |||| ||  ||||||||||||||||| |||||| |||||||||| ||||| |       
T  35099292 catccgttttaaaatgggtgtcgttttagcaaattgcacacaaattaagaaacgaaatgaaataatcattagacataacacttttactatactgctc--- 35099388  T
Q  263 ctttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagttatagtatttattaagggtaaagttgg 345  Q
          |||||||||||||||||||| ||||||||||||||  | ||||||||||||  ||||||||||||||||||||||||    
T  35099389 ------aagaaaaagacaaacttaaaattgcattgaaaattgtgcgagagaaaagtttgagtatttattaagggtaaagttgg 35099465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 218 - 319
Target Start/End: Complemental strand, 790253 - 790152
Alignment:
Q  218 aatgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaag 317  Q
    ||||||||||||||| || ||||  ||||||||||||||||||||||||||||||||||| |||| |||||||||||||| |||||  ||||||||||||    
T  790253 aatgaaataatcattgaatataacgcttttactaaactgcccttactttataagaaaaagtcaaaattaaagttgcattggaaattgtgtgagagaaaag 790154  T
Q  318 tt 319  Q
    ||    
T  790153 tt 790152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 222 - 319
Target Start/End: Complemental strand, 35239538 - 35239441
Alignment:
Q  222 aaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagtt 319  Q
    ||||||||||||  ||||| | ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||    
T  35239538 aaataatcattaggcataacatttttactaaactgtccttactttataagaaaaagacaaacttaaagttgcagtgaaaattgtgtgagagaaaagtt 35239441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 158 - 299
Target Start/End: Original strand, 43736783 - 43736922
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgc 257  Q
    |||||||||||||||||||| ||| ||| |||| ||||||||||| | | | ||| || ||||||||||||||||| | |||| |||||||||||||| |    
T  43736783 tactccatccgtttcaaaatgagtgtcgctttagccaattgcacaaa-atttagggatgaaatgaaataatcattagatataacacttttactaaactac 43736881  T
Q  258 ccttactttataagaaaaagacaaacttaaagttgcattgaa 299  Q
     |||| ||||||||||||||| ||||||||||||||||||||    
T  43736882 tcttattttataagaaaaaga-aaacttaaagttgcattgaa 43736922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 158 - 348
Target Start/End: Complemental strand, 54261658 - 54261466
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgc 257  Q
    |||||| ||||||||||||| ||| ||| |||| |||||| |||||||| |||| |||  ||| || || |||     ||||| | |||||||||| |      
T  54261658 tactccctccgtttcaaaatgagtgtcgctttagccaattacacacagattaagaaattgaataaagtagtcaaatgtcataacaattttactaaaataa 54261559  T
Q  258 ccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgt--gagagaaaagttatagtatttattaagggtaaagttggaag 348  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||  ||  ||||||||||||| |||||||||| ||||||||||||||||    
T  54261558 ccttactttataagaaaaatacaaacttaaagttgtattgaaaattgtgtgagagagaaaagttagagtatttattgagggtaaagttggaag 54261466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 218 - 346
Target Start/End: Complemental strand, 5244765 - 5244638
Alignment:
Q  218 aatgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaag 317  Q
    |||||||||||||||| |||||| ||||||| |||| |  | |||||| |||||||||| |||||||||||||||||||||||||   |||||||||||     
T  5244765 aatgaaataatcattagacataacacttttattaaagtctctttactt-ataagaaaaaaacaaacttaaagttgcattgaaaataatgtgagagaaaaa 5244667  T
Q  318 ttatagtatttattaagggtaaagttgga 346  Q
    ||| |||||||||| ||||||||||||||    
T  5244666 ttagagtatttattgagggtaaagttgga 5244638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 157 - 319
Target Start/End: Complemental strand, 42791538 - 42791383
Alignment:
Q  157 ttactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactg 256  Q
    ||||||||||||||||||||| ||| || ||||| |||||||||| || | ||||||||  |||||||||||||||| |||||| |||||||||||| |     
T  42791538 ttactccatccgtttcaaaatgagtgtcattttagccaattgcacgcatattaaggaatgtaatgaaataatcattagacataatacttttactaaatta 42791439  T
Q  257 cccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagtt 319  Q
    ||||||||| ||||       | ||| ||||||||||||||||||||  ||||||||||||||    
T  42791438 cccttacttcataa-------aaaaatttaaagttgcattgaaaattatgtgagagaaaagtt 42791383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 158 - 313
Target Start/End: Complemental strand, 51381967 - 51381812
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgc 257  Q
    |||||||| ||||||||||| ||| ||| ||||  |||||||||||||| |||||||| |||| ||||| |||   | ||||  | |||||||||| |      
T  51381967 tactccattcgtttcaaaatgagtgtcgctttagtcaattgcacacagattaaggaatgaaataaaatagtcaaatatcatagcagttttactaaaataa 51381868  T
Q  258 ccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagaga 313  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||  ||||||||    
T  51381867 ccttactttataataaaaagacaaacttaaagttgcattgaaaattgtgtgagaga 51381812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 222 - 348
Target Start/End: Complemental strand, 41287255 - 41287129
Alignment:
Q  222 aaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagttat 321  Q
    |||||||||||| |||||| |||||||||||||||| |||| |||||| ||||||  |||||||||||||||||||||||||  |||||| ||  |||      
T  41287255 aaataatcattagacataacacttttactaaactgcacttattttatatgaaaaactcaaacttaaagttgcattgaaaattgtgtgagaaaatggtttg 41287156  T
Q  322 agtatttattaagggtaaagttggaag 348  Q
    |||||||||| |||| |||||||||||    
T  41287155 agtatttattgagggaaaagttggaag 41287129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 168 - 342
Target Start/End: Original strand, 25722381 - 25722557
Alignment:
Q  168 gtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttacttta 267  Q
    |||||||||||||||||| |||| ||||||||||||||| |||| |||  ||| || || |||     ||||| | |||||||||| |  ||||||||||    
T  25722381 gtttcaaaataagtatcgatttagccaattgcacacagattaagaaatggaataaagtagtcaaatgtcataacaattttactaaaataaccttacttta 25722480  T
Q  268 taagaaaaagacaaacttaaagttgcattgaaaattccgt--gagagaaaagttatagtatttattaagggtaaagt 342  Q
     ||||| |||||||||||||||||||||||||||||  ||  ||||||||||||  |||||||||| ||||||||||    
T  25722481 caagaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttatttagggtaaagt 25722557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 158 - 319
Target Start/End: Complemental strand, 42740463 - 42740303
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgc 257  Q
    |||||| ||||||| ||||||||| |||||||| |||||| |||| | | ||| ||||  |||||||||||||||| || ||| ||||||||| ||||||    
T  42740463 tactccttccgttttaaaataagtgtcgttttagccaattacacatatattaaagaatgcaatgaaataatcattagacgtaacacttttact-aactgc 42740365  T
Q  258 ccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagtt 319  Q
    ||||| ||||||| ||||  | || |||||||||||||||||||||  |||||| |||||||    
T  42740364 ccttattttataaaaaaataataagcttaaagttgcattgaaaattgtgtgagaaaaaagtt 42740303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 244 - 320
Target Start/End: Complemental strand, 19552686 - 19552610
Alignment:
Q  244 ttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagtta 320  Q
    ||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||| |||||||||||||||    
T  19552686 ttttactaaactgtccttactttataagaaaaatacaaaattaaagttgcattgaaaattctgtgagagaaaagtta 19552610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 27941130 - 27941261
Alignment:
Q  1 gtaaggctgctgcctccccctccaaaactgtcatattaacccgctgccatttcatttgagcccgaaaaaattg-cctagagaagtctctaacacaacacg 99  Q
    |||||||| |||||||||||||||||||| |||||||   ||||||||||||  |||||| ||||| |||||| ||| ||||| ||||||| ||||||||    
T  27941130 gtaaggctactgcctccccctccaaaactatcatatttgtccgctgccattttgtttgagtccgaataaattgtcctcgagaa-tctctaatacaacacg 27941228  T
Q  100 caaaagatataatatggttacggtcatggaacg 132  Q
    ||||| |||||||||||||||| ||||| ||||    
T  27941229 caaaaaatataatatggttacgatcatgaaacg 27941261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 155 - 348
Target Start/End: Original strand, 32303812 - 32304007
Alignment:
Q  155 tgttactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaac 254  Q
    |||||||||||||| |||||||| ||| |||||||| | ||| | ||||||| |||||||| |||| || || |||     ||||  | ||||||||||     
T  32303812 tgttactccatccgcttcaaaatgagtgtcgttttaactaatcgtacacagattaaggaatgaaataaagtagtcaaatgtcatagcaattttactaaaa 32303911  T
Q  255 tgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgt--gagagaaaagttatagtatttattaagggtaaagttggaag 348  Q
    |  |||||||||||||||||||| ||||||||||| || ||||||||||  ||  ||||||||||||  |||||||||| ||||||||||||||||    
T  32303912 taaccttactttataagaaaaaggcaaacttaaagctgtattgaaaattgtgtaagagagaaaagtttgagtatttattgagggtaaagttggaag 32304007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 244 - 348
Target Start/End: Original strand, 2988606 - 2988712
Alignment:
Q  244 ttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaat--tccgtgagagaaaagttatagtatttattaagggtaaag 341  Q
    |||||||||| |  |||||||||||||||| ||||||||||||||||||||||||||||  | || ||||||||||||  |||||||||| |||||||||    
T  2988606 ttttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaaattgtgcgagagagaaaagtttgagtatttattgagggtaaag 2988705  T
Q  342 ttggaag 348  Q
    |||||||    
T  2988706 ttggaag 2988712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 2615544 - 2615410
Alignment:
Q  1 gtaaggctgctgcctccccctccaaaactgtcatattaacccgctgccatttcatttgagcccgaaaaaattgcctagagaagtctctaacacaacacgc 100  Q
    |||||||| |||||||||||||||||||| |||||||  |||||||||| ||| ||||||||||||  ||||||| | | ||| |||||||||||| | |    
T  2615544 gtaaggctactgcctccccctccaaaactatcatatttgcccgctgccaattcgtttgagcccgaatgaattgcccacaaaagcctctaacacaacgcac 2615445  T
Q  101 aaaagatataatatggttacggtcatggaacgcgg 135  Q
    |||| || ||||||||||| | ||||| |||||||    
T  2615444 aaaaaatgtaatatggttatgatcatgaaacgcgg 2615410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 165 - 348
Target Start/End: Original strand, 43687800 - 43687985
Alignment:
Q  165 tccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttact 264  Q
    ||||||||||||||||| ||||||||  ||||||||||| || ||| ||||  ||| || || |||     ||||| | |||||||||| |  |||||||    
T  43687800 tccgtttcaaaataagtgtcgttttagtcaattgcacacggattaatgaatggaataaagtagtcaaatgtcataacaattttactaaaataaccttact 43687899  T
Q  265 ttataagaaaaagacaaacttaaagttgcattgaaaattccgt--gagagaaaagttatagtatttattaagggtaaagttggaag 348  Q
    ||||||||| |||||||| |||||||| |||||||||||  ||  ||||||||||||  |||||||||| ||||||||||||||||    
T  43687900 ttataagaacaagacaaatttaaagtttcattgaaaattgtgtgagagagaaaagttggagtatttattgagggtaaagttggaag 43687985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 55199562 - 55199424
Alignment:
Q  1 gtaaggctgctgcctccccctccaaaactgtcatattaacccgctgccatttcatttgagcccgaaaaaattgcctagagaagtctctaacacaacacgc 100  Q
    |||||||  |||||||||||||||||||||||||||| | | |||| |||||| ||||||||||||  ||||||| |  | |||||||||||||||||||    
T  55199562 gtaaggcaactgcctccccctccaaaactgtcatatttatcagctgtcatttcgtttgagcccgaatgaattgcccacgggagtctctaacacaacacgc 55199463  T
Q  101 aaaagatataatatggttacggtcatggaacgcggcatc 139  Q
     |||||| ||||||  | ||||||||| |||| ||||||    
T  55199462 gaaagatgtaatatattgacggtcatgaaacgtggcatc 55199424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 158 - 319
Target Start/End: Original strand, 4476274 - 4476433
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgc 257  Q
    |||||| ||||||| ||||||||| |||||||| |||||| |||| | | ||| ||||  |||||||||||||||| || ||| ||||||||| ||||||    
T  4476274 tactccttccgttttaaaataagtgtcgttttagccaattacacatatattaaagaatgcaatgaaataatcattagacgtaacacttttact-aactgc 4476372  T
Q  258 ccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagtt 319  Q
    ||||| ||||||| ||||  | || |||||||||||||||||||||  |||||| |||||||    
T  4476373 ccttattttataa-aaaataataagcttaaagttgcattgaaaattgtgtgagaaaaaagtt 4476433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 208 - 348
Target Start/End: Complemental strand, 22731122 - 22730976
Alignment:
Q  208 taaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaacttaaag-------ttgcattgaaa 300  Q
    |||| |||| ||||||||||||||||||||||| | ||||||||||||| ||| | ||||||||||||||||||||||||||       || ||||||||    
T  22731122 taagaaatataatgaaataatcattaaacataacatttttactaaactg-cctcaatttataagaaaaagacaaacttaaagttacattttacattgaaa 22731024  T
Q  301 attccgtgagagaaaagttatagtatttattaagggtaaagttggaag 348  Q
     ||  ||||||||||||||  |||||||||| | ||||||||||||||    
T  22731023 tttgtgtgagagaaaagtttgagtatttattgaaggtaaagttggaag 22730976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 158 - 289
Target Start/End: Complemental strand, 45095771 - 45095638
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaac-ttttactaaactg 256  Q
    |||||| ||||||||||||| | | ||| |||| | |||||||| || | ||||||||  ||||||||||||||||||||||| || |||||||||| ||    
T  45095771 tactccctccgtttcaaaatgattgtcgctttagctaattgcacgcatattaaggaatggaatgaaataatcattaaacataacacattttactaaaatg 45095672  T
Q  257 -cccttactttataagaaaaagacaaacttaaag 289  Q
     ||||||||||||||||||| |||||||||||||    
T  45095671 ccccttactttataagaaaaggacaaacttaaag 45095638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 208 - 319
Target Start/End: Complemental strand, 53716194 - 53716085
Alignment:
Q  208 taaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgt 307  Q
    |||| ||| ||||||||||||||||  | ||||  ||||||||||||||| |||||||||||||||||||||||  |||||||||||||||||| |  ||    
T  53716194 taagaaatgaaatgaaataatcattggatataacgcttttactaaactgctcttactttataagaaaaagacaa--ttaaagttgcattgaaaactgtgt 53716097  T
Q  308 gagagaaaagtt 319  Q
    ||||||||||||    
T  53716096 gagagaaaagtt 53716085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 158 - 345
Target Start/End: Complemental strand, 3000984 - 3000807
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgc 257  Q
    |||||||||||| ||||||| ||| |||||||| | | ||| ||| | || || ||||  |||||||||| ||||| ||| || ||||||||||||||||    
T  3000984 tactccatccgtctcaaaatgagtgtcgttttagctagttgtacataaaagaatgaatgtaatgaaataaacattagaca-aacacttttactaaactgc 3000886  T
Q  258 ccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagttatagtatttattaagggtaaagttgg 345  Q
    ||         |||||||||||||| ||||||||||||||||||||  ||||||||||||||  |||||||||| |||||| ||||||    
T  3000885 cc---------aagaaaaagacaaatttaaagttgcattgaaaattgtgtgagagaaaagttggagtatttattgagggtagagttgg 3000807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 158 - 345
Target Start/End: Original strand, 15514647 - 15514824
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgc 257  Q
    |||||||||||||| ||||| | | ||||||||  |||||||||| | ||||||||||  |||||||||||||||| |||||| | |||||||||  |||    
T  15514647 tactccatccgttttaaaatgaatgtcgttttagtcaattgcacataaaataaggaatgtaatgaaataatcattagacataacaattttactaatttgc 15514746  T
Q  258 ccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagttatagtatttattaagggtaaagttgg 345  Q
    ||         ||| |||||||||||||||||||||||||||||||  | ||||||||||||  ||||| |||| | |||||||||||    
T  15514747 cc---------aag-aaaagacaaacttaaagttgcattgaaaattatgcgagagaaaagttggagtatctattgaaggtaaagttgg 15514824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 198 - 319
Target Start/End: Complemental strand, 34060066 - 34059947
Alignment:
Q  198 gcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattg 297  Q
    ||||||||| |||| |||  ||||||||||| |||  | |||||  |||||||||||| |||||||||||||||||||||||||  ||||||||||||||    
T  34060066 gcacacagattaagaaatggaatgaaataataattggatataaagtttttactaaactacccttactttataagaaaaagacaa--ttaaagttgcattg 34059969  T
Q  298 aaaattccgtgagagaaaagtt 319  Q
    ||||||  | ||||||||||||    
T  34059968 aaaattgtgcgagagaaaagtt 34059947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 165 - 348
Target Start/End: Complemental strand, 53560900 - 53560715
Alignment:
Q  165 tccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttact 264  Q
    ||||||| ||||||||| |||||||| |||||| || ||| | ||||||||||||| || || | |     ||||| | |||||||||| |  |||||||    
T  53560900 tccgttttaaaataagtgtcgttttagccaattacatacatattaaggaataaaataaagtagttaaatgtcataataattttactaaaataaccttact 53560801  T
Q  265 ttataagaaaaagacaaacttaaagttgcattgaaaattccgt--gagagaaaagttatagtatttattaagggtaaagttggaag 348  Q
    ||||||||||||||||| |||||||||||||||||||||  ||  ||||||||||||  ||| |||||  ||| ||||||||||||    
T  53560800 ttataagaaaaagacaatcttaaagttgcattgaaaattatgtgagagagaaaagtttgagtttttatcgaggataaagttggaag 53560715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 158 - 348
Target Start/End: Original strand, 20512406 - 20512598
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgc 257  Q
    |||||| ||||||| ||||| ||| ||| ||||  |||||||||||||| |||| |||  ||| ||||| |||     ||||  | |||||||||| |      
T  20512406 tactccctccgttttaaaatgagtgtcgctttagtcaattgcacacagattaagaaattgaataaaatagtcaaatgtcatagcaattttactaaaataa 20512505  T
Q  258 ccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgt--gagagaaaagttatagtatttattaagggtaaagttggaag 348  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||  ||  ||||||||||||  |||||||||| | ||||||||||||||    
T  20512506 ccttactttataagaaaaatacaaacttaaagttgtattgaaaattgtgtgagagagaaaagttggagtatttattgaaggtaaagttggaag 20512598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 164 - 269
Target Start/End: Original strand, 43599466 - 43599571
Alignment:
Q  164 atccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttac 263  Q
    |||||||| ||||| ||| ||||||||   ||||||||| | | |||||||| ||||||||||||||||| |||||| |||||||||||||||||||||     
T  43599466 atccgttttaaaatgagtgtcgttttatataattgcacataaattaaggaatgaaatgaaataatcattagacataatacttttactaaactgcccttat 43599565  T
Q  264 tttata 269  Q
    ||||||    
T  43599566 tttata 43599571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 258 - 348
Target Start/End: Complemental strand, 44645481 - 44645389
Alignment:
Q  258 ccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgt--gagagaaaagttatagtatttattaagggtaaagttggaag 348  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||  ||  ||||||||||||  |||||||||| ||||||||||||||||    
T  44645481 ccttactttatatgaaaaagataaacttaaagttgcattgaaaattatgtaagagagaaaagttggagtatttattgagggtaaagttggaag 44645389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 11 - 118
Target Start/End: Original strand, 42340423 - 42340530
Alignment:
Q  11 tgcctccccctccaaaactgtcatattaacccgctgccatttcatttgagcccgaaaaaattg-cctagagaagtctctaacacaacacgcaaaagatat 109  Q
    ||||||||||||||| ||||||||||   |||||||||||||  |||||||||||| |||||| ||  ||| |||||||||||||||||||||||||| |    
T  42340423 tgcctccccctccaacactgtcatatctgcccgctgccattttgtttgagcccgaataaattgtccacgag-agtctctaacacaacacgcaaaagatgt 42340521  T
Q  110 aatatggtt 118  Q
    || ||||||    
T  42340522 aagatggtt 42340530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 165 - 257
Target Start/End: Original strand, 42857010 - 42857102
Alignment:
Q  165 tccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgc 257  Q
    ||||||| ||||| ||| ||||||||  ||||| |||||||| |||||||| ||||||||||||||||| |||||| | ||||||||||||||    
T  42857010 tccgttttaaaatgagtgtcgttttaggcaattacacacagattaaggaatcaaatgaaataatcattagacataacatttttactaaactgc 42857102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 206 - 348
Target Start/End: Original strand, 43600150 - 43600293
Alignment:
Q  206 aataaggaataaaatgaaataatcattaaacataaaacttttactaaactgccctt-actttataagaaaaa-gacaaacttaaagttgcattgaaaatt 303  Q
    |||||| ||| |||| ||||||| |||| | |||| | |||||||||||| ||||| ||||||||| ||||| |||||| ||||||||  |||| |||||    
T  43600150 aataagaaatgaaataaaataattattagatataacatttttactaaacttccctttactttataaaaaaaatgacaaatttaaagttatattggaaatt 43600249  T
Q  304 ccgtgagagaaaagttatagtatttattaagggtaaagttggaag 348  Q
      ||||||||||||| | |||||||||| ||||||||||||||||    
T  43600250 gtgtgagagaaaagt-agagtatttattgagggtaaagttggaag 43600293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 468 - 520
Target Start/End: Complemental strand, 49864845 - 49864793
Alignment:
Q  468 tggattttggaaaaagctattcctaatagcttttcattttagagtcaaaatag 520  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  49864845 tggattttggaaaaagctaatcctaatagcttttcattttagagtcaaaatag 49864793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 244 - 348
Target Start/End: Complemental strand, 43169491 - 43169385
Alignment:
Q  244 ttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagag--aaaagttatagtatttattaagggtaaag 341  Q
    |||||||||| |  |||||||||||||||| |||||||||||||||||| ||||||||||  |||||||  |||||||  |||||||||| | |||||||    
T  43169491 ttttactaaaataaccttactttataagaataagacaaacttaaagttgtattgaaaattgtgtgagagataaaagtttgagtatttattgaaggtaaag 43169392  T
Q  342 ttggaag 348  Q
    || ||||    
T  43169391 ttagaag 43169385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 218 - 319
Target Start/End: Original strand, 9167661 - 9167759
Alignment:
Q  218 aatgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaag 317  Q
    |||||||||||||||  |||||| | ||||||||||||||||||||||||| | ||||| | ||||||||| |||||||||||||  ||||| |||||||    
T  9167661 aatgaaataatcatttcacataacatttttactaaactgcccttactttatta-aaaaaaaaaaacttaaaattgcattgaaaat--cgtgaaagaaaag 9167757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 278 - 348
Target Start/End: Complemental strand, 50420379 - 50420309
Alignment:
Q  278 acaaacttaaagttgcattgaaaattccgtgagagaaaagttatagtatttattaagggtaaagttggaag 348  Q
    |||||||||||||||||||||||||| || ||||||||||||| |||||||||| |  |||||||||||||    
T  50420379 acaaacttaaagttgcattgaaaattgcgcgagagaaaagttagagtatttattgaaagtaaagttggaag 50420309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 208 - 348
Target Start/End: Complemental strand, 22414944 - 22414807
Alignment:
Q  208 taaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgt 307  Q
    |||| ||| |||||||||||| |||| |||||| ||||||| |||||| ||  || |||||||| |||||| ||||||||||||||||||||||||  ||    
T  22414944 taagaaatgaaatgaaataattattagacataatacttttattaaactacctatagtttataag-aaaagagaaacttaaagttgcattgaaaatt--gt 22414848  T
Q  308 gagagaaaagttatagtatttattaagggtaaagttggaag 348  Q
    |  ||| ||| |  |||||||||| | ||||||||||||||    
T  22414847 gtaagagaaggttgagtatttattgaaggtaaagttggaag 22414807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 244 - 348
Target Start/End: Complemental strand, 36541648 - 36541542
Alignment:
Q  244 ttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgt--gagagaaaagttatagtatttattaagggtaaag 341  Q
    |||||||||| |  |||| ||||||| ||| ||||||||||||||||||||| |||||||  ||  ||||||||||||  | |||||||| |||||||||    
T  36541648 ttttactaaaattaccttgctttataggaacaagacaaacttaaagttgcatcgaaaattgtgtgagagagaaaagttggaatatttattgagggtaaag 36541549  T
Q  342 ttggaag 348  Q
    |||||||    
T  36541548 ttggaag 36541542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 258 - 343
Target Start/End: Original strand, 42007072 - 42007159
Alignment:
Q  258 ccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtg--agagaaaagttatagtatttattaagggtaaagtt 343  Q
    ||||| |||||||||| |||||||||||||||||||||||||||||   ||  ||| |||||||  |||||||||||||| |||||||    
T  42007072 ccttattttataagaacaagacaaacttaaagttgcattgaaaattgtatgaaagaaaaaagtttgagtatttattaaggataaagtt 42007159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 46007353 - 46007214
Alignment:
Q  1 gtaaggctgctgcctccccctccaaaactgtcatattaacccgctgccatttcatttgagcccgaa-aaaattgcctagagaagtctct-aacacaacac 98  Q
    |||||||| ||| ||||||||  |||| |||| ||||  |||||||||||||| |||||||||||| ||| || ||  ||| ||||||| |||| |||||    
T  46007353 gtaaggctactgtctccccctaaaaaattgtcgtatttgcccgctgccatttcgtttgagcccgaataaattttccacgag-agtctctaaacaaaacac 46007255  T
Q  99 gcaaaagatataatatggttacggtcatggaacgcggcatc 139  Q
    ||||||||||||| ||||||||  | ||||||| |||||||    
T  46007254 gcaaaagatataagatggttacaataatggaacacggcatc 46007214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 472 - 519
Target Start/End: Original strand, 33761017 - 33761064
Alignment:
Q  472 ttttggaaaaagctattcctaatagcttttcattttagagtcaaaata 519  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  33761017 ttttggaaaaagctaatcctaatagattttcattttagagtcaaaata 33761064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 48227464 - 48227326
Alignment:
Q  1 gtaaggctgctgcctccccctccaaaactgtcatattaacccgctgccatttcatttgagcccgaaaaaattgccta-gagaagtctctaacacaacacg 99  Q
    |||||||| |||| |||| |||||| || ||||| ||  ||| ||||  |||| ||| |||||||| ||||||||   |||| |||||||||||||||||    
T  48227464 gtaaggctactgcatcccactccaatacagtcatgttttcccactgctgtttcgtttaagcccgaataaattgcccgcgaga-gtctctaacacaacacg 48227366  T
Q  100 caaaagatataatatggttacggtcatggaacgcggcatc 139  Q
    |||||||| ||| ||||||||||| ||| || ||||||||    
T  48227365 caaaagatgtaacatggttacggtaatgaaatgcggcatc 48227326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 478 - 519
Target Start/End: Complemental strand, 39555286 - 39555245
Alignment:
Q  478 aaaaagctattcctaatagcttttcattttagagtcaaaata 519  Q
    ||||||||| ||||||||||||||||||||||||||||||||    
T  39555286 aaaaagctaatcctaatagcttttcattttagagtcaaaata 39555245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 271 - 319
Target Start/End: Original strand, 43599855 - 43599903
Alignment:
Q  271 gaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagtt 319  Q
    |||||||||||||||||||||||||| ||||||  ||||||||||||||    
T  43599855 gaaaaagacaaacttaaagttgcattaaaaattgtgtgagagaaaagtt 43599903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 479 - 520
Target Start/End: Original strand, 28405064 - 28405105
Alignment:
Q  479 aaaagctattcctaatagcttttcattttagagtcaaaatag 520  Q
    |||||||| |||||||||||||||||||||| ||||||||||    
T  28405064 aaaagctaatcctaatagcttttcattttagggtcaaaatag 28405105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 468 - 520
Target Start/End: Original strand, 11150085 - 11150137
Alignment:
Q  468 tggattttggaaaaagctattcctaatagcttttcattttagagtcaaaatag 520  Q
    |||||||||  ||||||||  ||||||||||||||||||||| ||||||||||    
T  11150085 tggattttgagaaaagctaaccctaatagcttttcattttagggtcaaaatag 11150137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 468 - 520
Target Start/End: Complemental strand, 12830572 - 12830520
Alignment:
Q  468 tggattttggaaaaagctattcctaatagcttttcattttagagtcaaaatag 520  Q
    |||||||||  ||||||||  ||| ||||||||||||||||||||||||||||    
T  12830572 tggattttgagaaaagctaaccctgatagcttttcattttagagtcaaaatag 12830520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 230
Target Start/End: Original strand, 35557662 - 35557734
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatca 230  Q
    |||||| ||||||||||||||| | |||||||| ||| ||||||||||| ||| |||| |||| || ||||||    
T  35557662 tactccctccgtttcaaaataaatgtcgttttagccatttgcacacagattaatgaattaaataaagtaatca 35557734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 488 - 520
Target Start/End: Original strand, 51380383 - 51380415
Alignment:
Q  488 tcctaatagcttttcattttagagtcaaaatag 520  Q
    |||||||||||||||||||||||||||||||||    
T  51380383 tcctaatagcttttcattttagagtcaaaatag 51380415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 230
Target Start/End: Complemental strand, 51398251 - 51398179
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatca 230  Q
    |||||| ||||||||||||| ||| ||| |||| ||||||||||||||| |||| ||| |||| || ||||||    
T  51398251 tactccctccgtttcaaaatgagtgtcgctttagccaattgcacacagattaagaaatgaaataaagtaatca 51398179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 212
Target Start/End: Original strand, 52222761 - 52222816
Alignment:
Q  157 ttactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataagg 212  Q
    ||||||| ||||||||||||| ||| |||||||| |||||||||||| || |||||    
T  52222761 ttactccctccgtttcaaaattagtgtcgttttagccaattgcacacggattaagg 52222816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 268 - 331
Target Start/End: Complemental strand, 49470922 - 49470857
Alignment:
Q  268 taagaaaaagacaaacttaaagttgcattgaaaattccgt--gagagaaaagttatagtatttatt 331  Q
    |||||| ||||||||||||||| |||||||||||||  ||  ||||||||||||  ||||||||||    
T  49470922 taagaataagacaaacttaaagctgcattgaaaattgtgtaagagagaaaagttggagtatttatt 49470857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 470 - 519
Target Start/End: Complemental strand, 17229135 - 17229086
Alignment:
Q  470 gattttggaaaaagctattcctaatagcttttcattttagagtcaaaata 519  Q
    |||||||  ||||| || ||||||||||||||||||||||| ||||||||    
T  17229135 gattttgagaaaagttaatcctaatagcttttcattttagaatcaaaata 17229086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 116; Significance: 1e-58; HSPs: 71)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 157 - 348
Target Start/End: Original strand, 28751319 - 28751510
Alignment:
Q  157 ttactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactg 256  Q
    ||||||| || |||||||||| ||| |||||||| ||||||||||||||| |||||||| |||| |||||||||||| |||||| | |||||||||||||    
T  28751319 ttactccctctgtttcaaaatgagtgtcgttttagccaattgcacacagattaaggaatgaaataaaataatcattagacataacatttttactaaactg 28751418  T
Q  257 cccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagttatagtatttattaagggtaaagttggaag 348  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||||  | ||||||||||||  |||||||||| ||||||||||||||||    
T  28751419 cccttactttataagaaaaggacaaacttaaagttacattgaaaattgtgcgagagaaaagtttgagtatttattgagggtaaagttggaag 28751510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 157 - 319
Target Start/End: Original strand, 48259774 - 48259936
Alignment:
Q  157 ttactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactg 256  Q
    ||||||| ||||||||||||| ||| |||||||| ||||||||||||||| ||||||||| |||||||||||| ||| |||||| ||||||| |||||||    
T  48259774 ttactccctccgtttcaaaatgagtgtcgttttagccaattgcacacagattaaggaatagaatgaaataatcgttagacataacacttttattaaactg 48259873  T
Q  257 cccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagtt 319  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||||  |||| |||||||||    
T  48259874 cccttgctttataagaaaaagataaacttaaagttgcattgaaaattgtgtgaaagaaaagtt 48259936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 165 - 348
Target Start/End: Original strand, 5317496 - 5317679
Alignment:
Q  165 tccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactg-cccttac 263  Q
    ||||||| ||||| ||| ||||||||  |||| | ||| ||| |||||||| ||||||||||||||||| |||||| |||||||||||| || ||||||     
T  5317496 tccgttttaaaatgagtgtcgttttaggcaatagtacatagattaaggaatgaaatgaaataatcattagacataacacttttactaaattgccccttat 5317595  T
Q  264 tttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagttatagtatttattaagggtaaagttggaag 348  Q
    ||||||||||||||||||||||||||||||||||||||||  | |||||||||||| ||||||||||| ||||||||||||||||    
T  5317596 tttataagaaaaagacaaacttaaagttgcattgaaaattgtg-gagagaaaagttgtagtatttattgagggtaaagttggaag 5317679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 161 - 348
Target Start/End: Original strand, 17919736 - 17919922
Alignment:
Q  161 tccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgccct 260  Q
    |||| |||||||||||| ||| ||| |||| |||||| || ||||| ||| |||| |||||||||||||||||| ||||| |||||||||||||||||||    
T  17919736 tccacccgtttcaaaatgagtgtcgctttagccaattacatacagattaatgaatgaaatgaaataatcattaa-cataacacttttactaaactgccct 17919834  T
Q  261 tactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagttatagtatttattaagggtaaagttggaag 348  Q
    |  ||||||  ||||||||||||||||||||||||||||||||  |||||| |||||||| ||||| |||| ||||||||||||||||    
T  17919835 tgttttatattaaaaagacaaacttaaagttgcattgaaaattgtgtgagaaaaaagttagagtatatattgagggtaaagttggaag 17919922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 158 - 316
Target Start/End: Original strand, 84430 - 84588
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgc 257  Q
    ||||||||| |||||||||| ||| ||| ||||  |||||||||||||| ||||||||  |||||||||||||||| |||||| |||||||||||| ||     
T  84430 tactccatctgtttcaaaatgagtgtcgctttagtcaattgcacacagattaaggaattgaatgaaataatcattagacataacacttttactaaaatgt 84529  T
Q  258 ccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaa 316  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  | |||||||||    
T  84530 ccttactttataagaaaaagacaaacttaaagttgcattgaaaattgtgcgagagaaaa 84588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 170 - 348
Target Start/End: Complemental strand, 12002474 - 12002296
Alignment:
Q  170 ttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttactttata 269  Q
    |||||||| ||| ||||||||  |||||||||||| | |||||||| ||||||||||||||| | |||||| ||||||||||||||||||||  ||||||    
T  12002474 ttcaaaatgagtgtcgttttagacaattgcacacatattaaggaatgaaatgaaataatcatcagacataatacttttactaaactgcccttgttttata 12002375  T
Q  270 agaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagttatagtatttattaagggtaaagttggaag 348  Q
     |||||||||||||||||||||||||||||||||  |||||| |||||||  |||||||||| | ||||||| ||||||    
T  12002374 tgaaaaagacaaacttaaagttgcattgaaaattgtgtgagaaaaaagttggagtatttattgaaggtaaagctggaag 12002296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 158 - 319
Target Start/End: Original strand, 24040936 - 24041097
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgc 257  Q
    |||||| | ||||| ||||| ||| ||| |||| |||||| ||||  || ||||||||  |||||||||||||||| |||||| ||||||||||||||||    
T  24040936 tactccctacgttttaaaatgagtgtcgctttagccaatttcacatggattaaggaatggaatgaaataatcattagacataacacttttactaaactgc 24041035  T
Q  258 ccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagtt 319  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  24041036 ccttactttataagaaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtt 24041097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 169 - 348
Target Start/End: Original strand, 15698673 - 15698853
Alignment:
Q  169 tttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgccct-tacttta 267  Q
    ||||||||||||| | |||||| ||||||||||||| | ||||||||||||| |||||||||||| |||||| ||||| | |||||| || | |||||||    
T  15698673 tttcaaaataagtgttgttttagccaattgcacacaaattaaggaataaaattaaataatcattagacataacactttaaataaactaccatgtacttta 15698772  T
Q  268 taagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagttatagtatttattaagggtaaagttggaag 348  Q
    ||||||||||| ||||||||||||  ||||||||||  ||||||||||||||  |||||||||| || |||||||||||||    
T  15698773 taagaaaaagataaacttaaagttctattgaaaattatgtgagagaaaagtttgagtatttattgagagtaaagttggaag 15698853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 158 - 331
Target Start/End: Original strand, 50349769 - 50349948
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgc 257  Q
    |||||| ||||||||||||| ||| | | |||| ||||||| ||||| | ||||||||  |||||||||||||||| |||||| ||||||||||||||||    
T  50349769 tactccctccgtttcaaaatgagtgttgctttagccaattgaacacaaattaaggaatggaatgaaataatcattagacataacacttttactaaactgc 50349868  T
Q  258 ccttact------ttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagttatagtatttatt 331  Q
    |||||||      |||||||||||||||||||||||||||||||||||||||  ||||||||||||||  ||||||||||    
T  50349869 ccttactttataattataagaaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatttatt 50349948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 161 - 316
Target Start/End: Original strand, 37437319 - 37437474
Alignment:
Q  161 tccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaactttt-actaaactgccc 259  Q
    ||||||||||||||| | ||| ||| |||| || |||||||||| | |||||||| |||||||||| |||||| |||||| |||||| |||||| |||||    
T  37437319 tccatccgtttcaaa-tgagtgtcgctttagcccattgcacacatattaaggaatgaaatgaaatattcattagacataacactttttactaaattgccc 37437417  T
Q  260 ttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaa 316  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  37437418 ttactttataagaaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaa 37437474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 44527304 - 44527169
Alignment:
Q  1 gtaaggctgctgcctccccctccaaaactgtcatattaacccgctgccatttcatttgagcccgaaaaaattgcctagagaagtctctaacacaacacgc 100  Q
    |||||||| ||||||||||||||||||||||||||||   ||||||||||||  |||||||||||| |||||||| | |  |||||||||||||||||||    
T  44527304 gtaaggctactgcctccccctccaaaactgtcatatttgtccgctgccattttgtttgagcccgaataaattgcccacaagagtctctaacacaacacgc 44527205  T
Q  101 aaaagatataatatggttacggtcatggaacgcggc 136  Q
    ||||||| |||||||||||| |||||||||||||||    
T  44527204 aaaagatgtaatatggttacagtcatggaacgcggc 44527169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 158 - 344
Target Start/End: Complemental strand, 6332406 - 6332221
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgc 257  Q
    ||||||||| || ||||||| ||| ||| |||| ||||||||||||| | |||| |||  |||||||||||||||| |||||| ||||||||||||||||    
T  6332406 tactccatc-gtatcaaaatgagtgtcgctttaaccaattgcacacaaattaagaaattgaatgaaataatcattagacataacacttttactaaactgc 6332308  T
Q  258 ccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagttatagtatttattaagggtaaagttg 344  Q
    | ||  |||||| ||||||||||||| ||||||| |||||||||||  |||||| |||||||  ||||||||||||| |||||||||    
T  6332307 ctttgttttatatgaaaaagacaaacataaagttacattgaaaattgtgtgagaaaaaagttggagtatttattaagagtaaagttg 6332221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 158 - 348
Target Start/End: Complemental strand, 2459246 - 2459058
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgc 257  Q
    |||||| ||||||||||||| ||| ||| |||| ||||||||||||||| |||| ||| ||||||| || |||     ||||| | |||||||||| |      
T  2459246 tactccctccgtttcaaaatgagtgtcgctttagccaattgcacacagattaagaaattaaatgaagtagtcaaatgtcataacaattttactaaaataa 2459147  T
Q  258 ccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagttatagtatttattaagggtaaagttggaag 348  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||  ||||||||||||||  ||||||| || ||||||||||||||||    
T  2459146 ccttactttataagaaaaatacaaacttaaagttgtattgaaaatt--gtgagagaaaagtttgagtatttgttgagggtaaagttggaag 2459058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 218 - 348
Target Start/End: Complemental strand, 11650238 - 11650108
Alignment:
Q  218 aatgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaag 317  Q
    |||||||||| ||||| | |||  | |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||  |||||||||||     
T  11650238 aatgaaataaccattagatatagtatttttactaaactgcccttactttaaaagaaaaagacaaacttaaagttgcattggaaattgtgtgagagaaaaa 11650139  T
Q  318 ttatagtatttattaagggtaaagttggaag 348  Q
    ||  |||||||||| ||||||||||||||||    
T  11650138 ttggagtatttattgagggtaaagttggaag 11650108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 165 - 319
Target Start/End: Complemental strand, 30006363 - 30006209
Alignment:
Q  165 tccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttact 264  Q
    ||||||||||||| | | ||| ||||  |||||||||||||| ||| ||||  |||||||||||||||| |||||| ||| |||||||| ||| ||||||    
T  30006363 tccgtttcaaaatgaatgtcgctttagtcaattgcacacagattaatgaattgaatgaaataatcattagacataacactattactaaattgctcttact 30006264  T
Q  265 ttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagtt 319  Q
    |||||||||||||| ||| ||||||||||||||||||||   |||||||||||||    
T  30006263 ttataagaaaaagataaatttaaagttgcattgaaaattgtttgagagaaaagtt 30006209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 218 - 344
Target Start/End: Complemental strand, 1429047 - 1428920
Alignment:
Q  218 aatgaaataatcattaaacataaaacttttactaaactgccctt-actttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaa 316  Q
    ||||||||||| |||| | |||| |||||||||||||||||||| |||||||||||||| |||||||||||||||| |||| |||||  |||||||||||    
T  1429047 aatgaaataattattagatataacacttttactaaactgccctttactttataagaaaaggacaaacttaaagttgaattggaaattgtgtgagagaaaa 1428948  T
Q  317 gttatagtatttattaagggtaaagttg 344  Q
    |||  |||||||||| ||||||||||||    
T  1428947 gtttgagtatttattgagggtaaagttg 1428920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 218 - 349
Target Start/End: Complemental strand, 43929864 - 43929734
Alignment:
Q  218 aatgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaag 317  Q
    |||||||||||||||| |||||| |||||||||| ||| || |||||||||||||||||||| |||||||||||| || |||||||  ||||||||||||    
T  43929864 aatgaaataatcattagacataacacttttactatacttccattactttataagaaaaagactaacttaaagttgtatcgaaaattatgtgagagaaaag 43929765  T
Q  318 ttatagtatttattaagggtaaagttggaagg 349  Q
     |  |||||||||| |||||||||||||||||    
T  43929764 -tggagtatttattgagggtaaagttggaagg 43929734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 48166288 - 48166150
Alignment:
Q  1 gtaaggctgctgcctccccctccaaaactgtcatattaacccgctgccatttcatttgagcccgaaaaaattgcctagagaagtctctaacacaacacgc 100  Q
    ||||||||  || ||||| ||||||||||||||||||  | ||||||||||||||||||||||||| |||||| | |  | ||||||||||||||||| |    
T  48166288 gtaaggctattgtctcccactccaaaactgtcatatttgctcgctgccatttcatttgagcccgaataaattgaccacgggagtctctaacacaacacac 48166189  T
Q  101 aaaagatataatatggttacggtcatggaacgcggcatc 139  Q
    ||||||| ||| |||||||||||||||||||| ||||||    
T  48166188 aaaagatgtaagatggttacggtcatggaacgtggcatc 48166150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 163 - 348
Target Start/End: Complemental strand, 40719250 - 40719065
Alignment:
Q  163 catccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgccctta 262  Q
    |||||||||  |||| ||| |||||||| |||||||||||||   |||||||| ||||||||||||||||| |||| | | ||||||||||||||| ||     
T  40719250 catccgttttgaaatgagtgtcgttttagccaattgcacacaagttaaggaatgaaatgaaataatcattagacatcacatttttactaaactgccattg 40719151  T
Q  263 ctttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagttatagtatttattaagggtaaagttggaag 348  Q
     |||||| |||||||| ||| ||||||||| ||||| ||||  || ||| |||||||  |||||||||| | ||||||||||||||    
T  40719150 ttttatatgaaaaagataaatttaaagttgtattgagaattgtgtaagaaaaaagttggagtatttattgaaggtaaagttggaag 40719065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 218 - 319
Target Start/End: Original strand, 43105574 - 43105675
Alignment:
Q  218 aatgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaag 317  Q
    |||||||||||||||| |||||| |||||||||||| | || ||| ||||||||||||||||||||||||| |||||||||||||| |||||||||||||    
T  43105574 aatgaaataatcattagacataacacttttactaaattaccattattttataagaaaaagacaaacttaaaattgcattgaaaattgcgtgagagaaaag 43105673  T
Q  318 tt 319  Q
    ||    
T  43105674 tt 43105675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 218 - 347
Target Start/End: Complemental strand, 52403656 - 52403527
Alignment:
Q  218 aatgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaag 317  Q
    |||||||||||||||  | |||| ||| ||| |||||||||||||||||||||| |||||||||| ||||||||||| ||||||||  |||||||| |||    
T  52403656 aatgaaataatcattggatataacactgttattaaactgcccttactttataaggaaaagacaaaattaaagttgcactgaaaattatgtgagagagaag 52403557  T
Q  318 ttatagtatttattaagggtaaagttggaa 347  Q
    ||  |||||||||| |||||||||||||||    
T  52403556 tttgagtatttattgagggtaaagttggaa 52403527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 157 - 301
Target Start/End: Original strand, 45749410 - 45749554
Alignment:
Q  157 ttactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactg 256  Q
    ||||||||||||||| ||||| ||| ||| |||| | ||||||||||| | ||   |||  ||| |||||||||||| |||||| ||||||||||||| |    
T  45749410 ttactccatccgttttaaaatgagtgtcgctttaactaattgcacacatattacataatggaataaaataatcattagacataacacttttactaaaccg 45749509  T
Q  257 cccttactttataagaaaaagacaaacttaaagttgcattgaaaa 301  Q
    |||||||||||||||||||||||||||||||| || |||||||||    
T  45749510 cccttactttataagaaaaagacaaacttaaatttacattgaaaa 45749554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 199 - 342
Target Start/End: Complemental strand, 44583970 - 44583828
Alignment:
Q  199 cacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattga 298  Q
    |||||| | |||| ||| |||| |||||||||||| |||||| | |||| |||||||||| ||| |||||||||||||||||||||||| ||||||||||    
T  44583970 cacacaaattaagaaatgaaataaaataatcattagacataacaattttcctaaactgcc-ttattttataagaaaaagacaaacttaatgttgcattga 44583872  T
Q  299 aaattccgtgagagaaaagttatagtatttattaagggtaaagt 342  Q
    ||| |  |||| |||||||||| |||| ||||||||||||||||    
T  44583871 aaactatgtgaaagaaaagttagagtacttattaagggtaaagt 44583828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 170 - 348
Target Start/End: Original strand, 672206 - 672383
Alignment:
Q  170 ttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttactttata 269  Q
    |||||||| ||| |||||||| ||||||||||||||| ||  ||||  ||| || || |||   | ||||  | |||||||||| |  |||||||| |||    
T  672206 ttcaaaatgagtgtcgttttaaccaattgcacacagattatagaatggaataaagtagtcaaatatcatatcaattttactaaaataaccttactt-ata 672304  T
Q  270 agaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagttatagtatttattaagggtaaagttggaag 348  Q
    ||||||||||||||||||| ||||||||||||||  ||||||||||||||| |||||||||| ||||||||||||||||    
T  672305 agaaaaagacaaacttaaatttgcattgaaaattgtgtgagagaaaagttagagtatttattgagggtaaagttggaag 672383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 25682702 - 25682564
Alignment:
Q  1 gtaaggctgctgcctccccctccaaaactgtcatattaacccgctgccatttcatttgagcccgaaaaaattgcctagagaagtctctaacacaacacgc 100  Q
    |||||||| |||||||||||||||| |||||||||||  |||| ||||||||| |||||||||  | |||||||| |  | |||||||||||||||||||    
T  25682702 gtaaggctactgcctccccctccaacactgtcatatttgcccgttgccatttcgtttgagcccagataaattgcccacgggagtctctaacacaacacgc 25682603  T
Q  101 aaaagatataatatggttacggtcatggaacgcggcatc 139  Q
    ||||||| ||| ||||||||| ||||| ||| |||||||    
T  25682602 aaaagatgtaagatggttacgttcatgaaacacggcatc 25682564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 165 - 319
Target Start/End: Complemental strand, 43755260 - 43755107
Alignment:
Q  165 tccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttact 264  Q
    ||||||| ||||| ||| ||| |||| ||||||||||||||| ||  ||||  ||||||||||| |||||| | || ||||||||||||  |||||||||    
T  43755260 tccgttttaaaatgagtgtcgctttagccaattgcacacagattacagaatggaatgaaataataattaaaaa-aacacttttactaaatcgcccttact 43755162  T
Q  265 ttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagtt 319  Q
    | ||||||||||||||||||||||||||  |||||||||  ||||||||||||||    
T  43755161 taataagaaaaagacaaacttaaagttgttttgaaaattgtgtgagagaaaagtt 43755107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 218 - 344
Target Start/End: Complemental strand, 2245968 - 2245840
Alignment:
Q  218 aatgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattccg--tgagagaaa 315  Q
    |||||| |||||||||||||||| | ||||||||||||| | || ||||||||||||||||||||||||||| |||||||||||||  |   ||||||||    
T  2245968 aatgaagtaatcattaaacataatatttttactaaactgtcattcctttataagaaaaagacaaacttaaagatgcattgaaaattgtgaaagagagaaa 2245869  T
Q  316 agttatagtatttattaagggtaaagttg 344  Q
    ||||  |||||||||| ||||||||||||    
T  2245868 agtttgagtatttattgagggtaaagttg 2245840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 199 - 319
Target Start/End: Original strand, 10690908 - 10691028
Alignment:
Q  199 cacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattga 298  Q
    |||||| | |||| ||| ||||||||||||||||| | |||| | |||||||||||||| |||||||  |||||||||||||||||||||||||||||||    
T  10690908 cacacatattaagaaatgaaatgaaataatcattagatataacatttttactaaactgcacttacttcgtaagaaaaagacaaacttaaagttgcattga 10691007  T
Q  299 aaattccgtgagagaaaagtt 319  Q
    |||||  |||||| |||||||    
T  10691008 aaattgtgtgagataaaagtt 10691028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 244 - 348
Target Start/End: Complemental strand, 26252274 - 26252168
Alignment:
Q  244 ttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagag--aaaagttatagtatttattaagggtaaag 341  Q
    |||||||||| |  ||||| |||||||||| |||||||||||||||||||||||||||||  |||||||  |||||||| ||||||||||||||||||||    
T  26252274 ttttactaaaataaccttattttataagaacaagacaaacttaaagttgcattgaaaattgtgtgagagaaaaaagttagagtatttattaagggtaaag 26252175  T
Q  342 ttggaag 348  Q
    |||||||    
T  26252174 ttggaag 26252168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 196 - 319
Target Start/End: Original strand, 40060856 - 40060979
Alignment:
Q  196 ttgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcat 295  Q
    ||||||||| | |||| ||| |||||||||||| |||| |||||| |||||||||||| |||||||||||||||||||||||| ||  ||| ||||||||    
T  40060856 ttgcacacatattaagaaatgaaatgaaataatgattagacataacacttttactaaattgcccttactttataagaaaaagataattttatagttgcat 40060955  T
Q  296 tgaaaattccgtgagagaaaagtt 319  Q
    ||||||||  || |||||||||||    
T  40060956 tgaaaattttgtaagagaaaagtt 40060979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 198 - 319
Target Start/End: Original strand, 1430488 - 1430610
Alignment:
Q  198 gcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgccctt-actttataagaaaaagacaaacttaaagttgcatt 296  Q
    ||||||||| |||| |||  ||||||||||| |||| | |||| |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  1430488 gcacacagattaagaaatttaatgaaataataattagatataacacttttactaaactgcactttactttataagaaaaagacaaacttaaagttgcatt 1430587  T
Q  297 gaaaattccgtgagagaaaagtt 319  Q
    | |||||  ||| ||||||||||    
T  1430588 ggaaattgtgtgtgagaaaagtt 1430610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 48949860 - 48949998
Alignment:
Q  1 gtaaggctgctgcctccccctccaaaactgtcatattaacccgctgccatttcatttgagcccgaaaaaattgcctagagaagtctctaacacaacacgc 100  Q
    |||||||  |||||||||||||||||||| |||||||  | || ||||||||| ||||||||||||  ||||||| |  | |||||||||||||||||||    
T  48949860 gtaaggcaactgcctccccctccaaaactttcatatttgctcgttgccatttcgtttgagcccgaatgaattgccaacgggagtctctaacacaacacgc 48949959  T
Q  101 aaaagatataatatggttacggtcatggaacgcggcatc 139  Q
     |||||| ||||||| | ||||||||| |||||||||||    
T  48949960 gaaagatgtaatatgttgacggtcatgaaacgcggcatc 48949998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 158 - 320
Target Start/End: Complemental strand, 49895022 - 49894860
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgc 257  Q
    |||||||||| ||| ||||| ||| |||||||  ||||||||||||||| ||||||||  ||| ||||| |||     ||||| | |||||||||| |      
T  49895022 tactccatccattttaaaatgagtgtcgttttggccaattgcacacagattaaggaatggaataaaatagtcaaatgtcataacaattttactaaaataa 49894923  T
Q  258 ccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagtta 320  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||  |||||||||||||||    
T  49894922 ccttactttataagaataagacaaacttaaagttacattgaaaattgtgtgagagaaaagtta 49894860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 52109505 - 52109375
Alignment:
Q  1 gtaaggctgctgcctccccctccaaaactgtcatattaacccgctgccatttcatttgagcccgaaaaaattgcctagagaagtctctaacacaacacgc 100  Q
    |||||||| |||| |||||||||||||   |||||||  |||||||||||||| |||||||| ||| |||||| | | || |||||||||||||||| ||    
T  52109505 gtaaggctactgcatccccctccaaaatgatcatatttgcccgctgccatttcgtttgagcctgaataaattgtccacaggagtctctaacacaacatgc 52109406  T
Q  101 aaaagatataatatggttacggtcatggaac 131  Q
    ||||||||||| ||| |||||||||||||||    
T  52109405 aaaagatataagatgattacggtcatggaac 52109375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 259 - 348
Target Start/End: Original strand, 44582791 - 44582882
Alignment:
Q  259 cttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgag--agaaaagttatagtatttattaagggtaaagttggaag 348  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||  |||||||||  |||||||||| ||||||||||||||||    
T  44582791 cttactttataagaaaaagacaaacttaaagttgcattgaaaattatgtgagatagaaaagttggagtatttattgagggtaaagttggaag 44582882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 244 - 348
Target Start/End: Original strand, 254909 - 255015
Alignment:
Q  244 ttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtga--gagaaaagttatagtatttattaagggtaaag 341  Q
    |||||||||| |  || |||||||||||||||||||||||||||||||||||||||||||  ||||  ||||||||||  |||||||||| |||||||||    
T  254909 ttttactaaaataaccctactttataagaaaaagacaaacttaaagttgcattgaaaattgtgtgagtgagaaaagttggagtatttattgagggtaaag 255008  T
Q  342 ttggaag 348  Q
    |||||||    
T  255009 ttggaag 255015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 165 - 300
Target Start/End: Original strand, 48319924 - 48320055
Alignment:
Q  165 tccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttact 264  Q
    ||||||||||||| ||| ||| |||| ||||||||||||| | |||| |||  ||||    |||||||| |||||| |||||||||||| ||||||||||    
T  48319924 tccgtttcaaaatgagtgtcgctttagccaattgcacacatattaagaaatggaatg----aatcattagacataagacttttactaaattgcccttact 48320019  T
Q  265 ttataagaaaaagacaaacttaaagttgcattgaaa 300  Q
    |||||| | |||||||||||||||||||||| ||||    
T  48320020 ttataaaagaaagacaaacttaaagttgcatcgaaa 48320055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 244 - 348
Target Start/End: Complemental strand, 22665091 - 22664989
Alignment:
Q  244 ttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagttatagtatttattaagggtaaagtt 343  Q
    ||||||||||||  |||||||||||||||| |||||||||||||||||| ||| ||||||  |||||||| |||||  |||||||||| |||||||||||    
T  22665091 ttttactaaactaaccttactttataagaacaagacaaacttaaagttgaattaaaaatt--gtgagagagaagttggagtatttattgagggtaaagtt 22664994  T
Q  344 ggaag 348  Q
    |||||    
T  22664993 ggaag 22664989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 244 - 348
Target Start/End: Original strand, 28200220 - 28200326
Alignment:
Q  244 ttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaat--tccgtgagagaaaagttatagtatttattaagggtaaag 341  Q
    |||||||||| |  ||||||||||||||||||| ||||||||||||||| |||||||||  | || ||||||||||||  |||||||||| |||||||||    
T  28200220 ttttactaaaataaccttactttataagaaaaatacaaacttaaagttgtattgaaaattgtgcgagagagaaaagttggagtatttattgagggtaaag 28200319  T
Q  342 ttggaag 348  Q
    |||||||    
T  28200320 ttggaag 28200326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 165 - 347
Target Start/End: Original strand, 5854143 - 5854327
Alignment:
Q  165 tccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttact 264  Q
    ||||||||||||| ||| ||  |||| ||||||||||||||| ||||||||| ||| || || | |     ||||| | |||||||||| |  | |||||    
T  5854143 tccgtttcaaaatgagtgtcactttagccaattgcacacagattaaggaatagaataaagtagttaaatgtcataacaattttactaaaataactttact 5854242  T
Q  265 ttataagaaaaagacaaacttaaagttgcattgaaaattccgtgaga--gaaaagttatagtatttattaagggtaaagttggaa 347  Q
    ||||||||||||||||| ||||| |||||||||||||||  ||||||  ||||||||  |||||||||| ||| |||||||||||    
T  5854243 ttataagaaaaagacaaccttaaggttgcattgaaaattgtgtgagatcgaaaagttggagtatttattgaggataaagttggaa 5854327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 208 - 344
Target Start/End: Original strand, 43738216 - 43738352
Alignment:
Q  208 taaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgt 307  Q
    |||| ||| |||| ||||||| |||| |||||| | |||||||||||| || ||||||||||||||||||| |||  ||||||| | ||||||||| |||    
T  43738216 taagaaatgaaataaaataattattagacataatatttttactaaactacctttactttataagaaaaagataaatataaagttactttgaaaattgcgt 43738315  T
Q  308 gagagaaaagttatagtatttattaagggtaaagttg 344  Q
    || |||||| ||  |||||||||| || |||||||||    
T  43738316 gaaagaaaaattgaagtatttattgagagtaaagttg 43738352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 158 - 345
Target Start/End: Complemental strand, 12851972 - 12851794
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgc 257  Q
    |||||||||||||| ||||||||| ||| |||| |||||| |||| ||| |||||||| |||| ||||||||||||   |||| ||||||| |||| |||    
T  12851972 tactccatccgttttaaaataagtgtcgctttagccaattacacaaagattaaggaatgaaataaaataatcattaggtataacacttttaataaaatgc 12851873  T
Q  258 ccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagttatagtatttattaagggtaaagttgg 345  Q
    ||         |||||||||||||| ||||||||||||| ||||||   |||  ||||||||  ||||| |||| |||||||||||||    
T  12851872 cc---------aagaaaaagacaaaattaaagttgcattaaaaattgtatgaatgaaaagtttgagtatatattgagggtaaagttgg 12851794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 36733747 - 36733609
Alignment:
Q  1 gtaaggctgctgcctccccctccaaaactgtcatattaacccgctgccatttcatttgagcccgaaaaaattg-cctagagaagtctctaacacaacacg 99  Q
    ||||| || ||||||||||||||||||||| |||||| ||||| || |||||  |||||||||||| |||||| ||  ||| |||||||||||||||||     
T  36733747 gtaagactactgcctccccctccaaaactgccatatttacccgttgtcattttgtttgagcccgaataaattgtccacgag-agtctctaacacaacaca 36733649  T
Q  100 caaaagatataatatggttacggtcatggaacgcggcatc 139  Q
    |||||| | ||| |||||||  |||||| |||||||||||    
T  36733648 caaaaggtgtaagatggttatagtcatgaaacgcggcatc 36733609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 165 - 331
Target Start/End: Original strand, 6377205 - 6377361
Alignment:
Q  165 tccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttact 264  Q
    ||||||| ||||| ||| ||| |||| ||||||||||| | | |||||||| ||||||||||||||||| |||||| |||||||||||| |||||         
T  6377205 tccgttttaaaatgagtgtcgctttagccaattgcacataaattaaggaatgaaatgaaataatcattagacataacacttttactaaattgccc----- 6377299  T
Q  265 ttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagttatagtatttatt 331  Q
        ||||||||||||||||||||| || ||| ||||||  | |||| ||||||| |||||||||||    
T  6377300 ----aagaaaaagacaaacttaaagctgtattaaaaattatgcgaga-aaaagttgtagtatttatt 6377361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 51113366 - 51113228
Alignment:
Q  1 gtaaggctgctgcctccccctccaaaactgtcatattaacccgctgccatttcatttgagcccgaaaaaattgcctagagaagtctctaacacaacacgc 100  Q
    |||||||  ||||||||||||||||||| || |||||  | || ||||||||| |||||| |||||  ||||||| |  | |||||||||||||||||||    
T  51113366 gtaaggcaactgcctccccctccaaaacggttatatttgctcgttgccatttcgtttgagtccgaatgaattgcccacgggagtctctaacacaacacgc 51113267  T
Q  101 aaaagatataatatggttacggtcatggaacgcggcatc 139  Q
     |||||| ||||||| | ||||||||| ||| |||||||    
T  51113266 gaaagatgtaatatgttgacggtcatgaaacacggcatc 51113228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 263 - 348
Target Start/End: Original strand, 17806392 - 17806477
Alignment:
Q  263 ctttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagttatagtatttattaagggtaaagttggaag 348  Q
    |||||||||||||||||||||||||| ||||||||||||||   |||||||||||||  |||||||||| | |||||| |||||||    
T  17806392 ctttataagaaaaagacaaacttaaaattgcattgaaaattgtatgagagaaaagttggagtatttattgaaggtaaaattggaag 17806477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 17 - 136
Target Start/End: Complemental strand, 4395194 - 4395075
Alignment:
Q  17 cccctccaaaactgtcatattaacccgctgccatttcatttgagcccgaaaaaattgccta-gagaagtctctaacacaacacgcaaaagatataatatg 115  Q
    ||||| ||||||| |||||||  ||||||||||||||  ||||||||| | |||||||| | |||| |||||||||||| || ||||||| | | |||||    
T  4395194 ccccttcaaaactctcatatttgcccgctgccatttcgattgagcccggataaattgcccacgaga-gtctctaacacagcatgcaaaagttgtgatatg 4395096  T
Q  116 gttacggtcatggaacgcggc 136  Q
    |||||||||||||||||||||    
T  4395095 gttacggtcatggaacgcggc 4395075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 158 - 345
Target Start/End: Original strand, 45377071 - 45377249
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgc 257  Q
    |||||| ||||||||||||| | | |||||||| |||||| |||||| | |||| ||| ||||||||| ||||||| || ||  | |||||||||| |||    
T  45377071 tactccctccgtttcaaaatgattgtcgttttaaccaattacacacaaattaagaaatgaaatgaaatgatcattagacttatcatttttactaaattgc 45377170  T
Q  258 ccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagttatagtatttattaagggtaaagttgg 345  Q
     |         || |||||||||||||||||||| |||||||||||  | ||||||||||||  ||||| |||| |||||||||||||    
T  45377171 tc---------aataaaaagacaaacttaaagtttcattgaaaattgtgcgagagaaaagttggagtatctattgagggtaaagttgg 45377249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 18 - 139
Target Start/End: Complemental strand, 24538544 - 24538423
Alignment:
Q  18 ccctccaaaactgtcatattaacccgctgccatttcatttgagcccgaaaaaattgcctagagaagtctctaacacaacacgcaaaagatataatatggt 117  Q
    ||||||||||||||| ||||  || ||||||| ||| |||||||||||| |||||  | |  | ||||||||||||||||| |||||||| |||  ||||    
T  24538544 ccctccaaaactgtcgtatttgcctgctgccaattcgtttgagcccgaataaattatccacgggagtctctaacacaacacacaaaagatctaacttggt 24538445  T
Q  118 tacggtcatggaacgcggcatc 139  Q
    |||||| || ||||||||||||    
T  24538444 tacggttatagaacgcggcatc 24538423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 244 - 348
Target Start/End: Original strand, 42650247 - 42650352
Alignment:
Q  244 ttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagag-aaaagttatagtatttattaagggtaaagt 342  Q
    |||||||||| |  ||||| ||||||||||||||||||||||||| ||||||||||||||  ||||||| |||||||  ||||||| || | |||||||     
T  42650247 ttttactaaaataaccttagtttataagaaaaagacaaacttaaaattgcattgaaaattgtgtgagagaaaaagttgaagtatttcttgaaggtaaagc 42650346  T
Q  343 tggaag 348  Q
    ||||||    
T  42650347 tggaag 42650352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 259 - 316
Target Start/End: Original strand, 9552368 - 9552425
Alignment:
Q  259 cttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaa 316  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||  |||||||||||    
T  9552368 cttactttataagaacaagacaatcttaaagttgcattgaaaattatgtgagagaaaa 9552425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 158 - 347
Target Start/End: Original strand, 11134372 - 11134563
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgc 257  Q
    |||||| ||| ||||||||| ||| |||||||| ||||||||||||| | ||||||||  ||| || || |||     ||| | | |||||||||| |      
T  11134372 tactccctccatttcaaaatgagtgtcgttttagccaattgcacacatattaaggaatggaataaagtagtcaaatgtcatgacagttttactaaaatag 11134471  T
Q  258 ccttactttataagaaaaagacaaacttaaagttgcattgaaaat--tccgtgagagaaaagttatagtatttattaagggtaaagttggaa 347  Q
    |||||||||||  || ||||||||||||| |||||||||| ||||  |  | ||||||||||||  |||||||||| |||| ||||||||||    
T  11134472 ccttactttatttgacaaagacaaacttatagttgcattggaaattgtgagagagagaaaagttggagtatttattgagggcaaagttggaa 11134563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 16816936 - 16817070
Alignment:
Q  1 gtaaggctgctgcctccccctccaaaactgtcatattaacccgctgccatttcatttgagcccgaaaaaattgc-ctagagaagtctctaacacaacacg 99  Q
    |||||||| |||||||||| ||||||| |||||||||  ||| |||||||||   |||||| |||| ||||||| |  ||| ||||||||| |||| ||     
T  16816936 gtaaggctactgcctcccc-tccaaaattgtcatatttgcccactgccattttgattgagctcgaataaattgcacgcgag-agtctctaaaacaataca 16817033  T
Q  100 caaaagatataatatggttacggtcatggaacgcggc 136  Q
    |||||||| |||||||||||| | |||||||||||||    
T  16817034 caaaagatgtaatatggttacagacatggaacgcggc 16817070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 158 - 345
Target Start/End: Original strand, 15646985 - 15647162
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgc 257  Q
    |||||| || |||| ||||| ||| ||||||||  |||||||||||| | ||||||||  || |||||| |||||| |||||| ||||||||| || ||     
T  15646985 tactccctctgttttaaaatgagtgtcgttttagtcaattgcacacaaattaaggaatgtaaagaaatattcattagacataacacttttactgaattga 15647084  T
Q  258 ccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagttatagtatttattaagggtaaagttgg 345  Q
    ||         ||||||||||||||  | |||||| ||||||||||  |  |||||||||||  ||||||||||||||||||||||||    
T  15647085 cc---------aagaaaaagacaaaact-aagttggattgaaaattatgcaagagaaaagttggagtatttattaagggtaaagttgg 15647162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 244 - 348
Target Start/End: Complemental strand, 44024701 - 44024595
Alignment:
Q  244 ttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagaga--aaagttatagtatttattaagggtaaag 341  Q
    |||||||||| |  ||||| |||||| | | |||||||||||||||||  ||||||||||  ||||||||  ||||||  |||||||||| |||||||||    
T  44024701 ttttactaaaataaccttattttatagggacaagacaaacttaaagttaaattgaaaattgtgtgagagagaaaagttgaagtatttattgagggtaaag 44024602  T
Q  342 ttggaag 348  Q
    |||||||    
T  44024601 ttggaag 44024595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 468 - 520
Target Start/End: Complemental strand, 24059942 - 24059890
Alignment:
Q  468 tggattttggaaaaagctattcctaatagcttttcattttagagtcaaaatag 520  Q
    |||||||||  |||| ||| |||||||||||||||||||||||||||||||||    
T  24059942 tggattttgagaaaaactaatcctaatagcttttcattttagagtcaaaatag 24059890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 5609390 - 5609252
Alignment:
Q  1 gtaaggctgctgcctccccctccaaaactgtcatattaacccgctgccatttcatttgagcccgaaaaaattgcctagaga-agtctctaacacaacacg 99  Q
    |||||||| |||||||||||| ||||||| |||||||   |||||| |||    |||||||||||| ||||||| | | |  |||||||| |||| ||||    
T  5609390 gtaaggctactgcctcccccttcaaaactatcatatttgtccgctgtcatagagtttgagcccgaataaattgc-tcgtgtgagtctctagcacagcacg 5609292  T
Q  100 caaaagatataatatggttacggtcatggaacgcggcatc 139  Q
    | |||| | |||||||||||| ||||||||||||| ||||    
T  5609291 cgaaagttgtaatatggttacagtcatggaacgcgacatc 5609252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 245 - 303
Target Start/End: Original strand, 38132189 - 38132247
Alignment:
Q  245 tttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaatt 303  Q
    ||||||||| |  |||||||||||| ||| |||||| ||||||||||||||||||||||    
T  38132189 tttactaaaataaccttactttataggaacaagacatacttaaagttgcattgaaaatt 38132247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 303
Target Start/End: Original strand, 50591230 - 50591375
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgc 257  Q
    |||||||| ||||| ||||| ||| ||| |||| ||||||| ||||||| ||||||||  ||| || || | |     ||||| | |||||||||| |      
T  50591230 tactccattcgttttaaaatgagtgtcgctttagccaattgtacacagattaaggaatggaataaagtagtaaaatgtcataacaattttactaaaataa 50591329  T
Q  258 ccttactttataagaaaaagacaaacttaaagttgcattgaaaatt 303  Q
    ||||| |||||| ||| |||||||||||||| ||||||||||||||    
T  50591330 ccttattttataggaacaagacaaacttaaaattgcattgaaaatt 50591375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 226
Target Start/End: Original strand, 49468621 - 49468689
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaata 226  Q
    |||||| ||| ||||||||| ||| ||| |||| ||||||||||||||| |||||||| |||| |||||    
T  49468621 tactccctccatttcaaaatgagtgtcgctttagccaattgcacacagattaaggaatgaaataaaata 49468689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 291
Target Start/End: Original strand, 48173428 - 48173499
Alignment:
Q  220 tgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaacttaaagtt 291  Q
    |||||||||||||| |||||| | ||||| |||||  | |||| ||||||||||||| | ||||||||||||    
T  48173428 tgaaataatcattacacataacatttttattaaacacctcttattttataagaaaaatataaacttaaagtt 48173499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 470 - 520
Target Start/End: Original strand, 1060315 - 1060365
Alignment:
Q  470 gattttggaaaaagctattcctaatagcttttcattttagagtcaaaatag 520  Q
    |||||||  |||||||| | |||||||||||||||||||| ||||||||||    
T  1060315 gattttgagaaaagctaattctaatagcttttcattttagggtcaaaatag 1060365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 411 - 445
Target Start/End: Complemental strand, 5463564 - 5463530
Alignment:
Q  411 gctaaaatgacattcattttgaaacggagggagta 445  Q
    ||||||| |||||||||||||||||||||||||||    
T  5463564 gctaaaacgacattcattttgaaacggagggagta 5463530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 10843021 - 10842959
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaat 220  Q
    |||||||||||||||||||| ||| ||||||||  |||||||||| | | |||||||| ||||    
T  10843021 tactccatccgtttcaaaatgagtgtcgttttagtcaattgcacaaatattaaggaatgaaat 10842959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 470 - 520
Target Start/End: Original strand, 33299706 - 33299756
Alignment:
Q  470 gattttggaaaaagctattcctaatagcttttcattttagagtcaaaatag 520  Q
    |||||||  |||| ||| |||||||||||||||||||||| ||||||||||    
T  33299706 gattttgagaaaaactaatcctaatagcttttcattttagggtcaaaatag 33299756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 261 - 303
Target Start/End: Original strand, 35149394 - 35149436
Alignment:
Q  261 tactttataagaaaaagacaaacttaaagttgcattgaaaatt 303  Q
    |||||||||||||||||| ||| ||||||||||||||| ||||    
T  35149394 tactttataagaaaaagataaaattaaagttgcattgataatt 35149436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 470 - 520
Target Start/End: Complemental strand, 45563720 - 45563670
Alignment:
Q  470 gattttggaaaaagctattcctaatagcttttcattttagagtcaaaatag 520  Q
    |||||||  ||||| || |||||||||||||| ||||||||||||||||||    
T  45563720 gattttgagaaaagttaatcctaatagctttttattttagagtcaaaatag 45563670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 470 - 520
Target Start/End: Complemental strand, 49292017 - 49291967
Alignment:
Q  470 gattttggaaaaagctattcctaatagcttttcattttagagtcaaaatag 520  Q
    |||||||  |||||||| |||||||||||||| ||||||| ||||||||||    
T  49292017 gattttgagaaaagctaatcctaatagctttttattttagggtcaaaatag 49291967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 215
Target Start/End: Complemental strand, 5463816 - 5463759
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaat 215  Q
    |||||||||||||||||||| ||| ||| |||| ||||||||||| | | ||||||||    
T  5463816 tactccatccgtttcaaaatgagtgtcgctttagccaattgcacatatattaaggaat 5463759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 226
Target Start/End: Complemental strand, 48009244 - 48009183
Alignment:
Q  165 tccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaata 226  Q
    ||||||||||||| ||| ||||||||  |||||||||||| | |||||||| |||| |||||    
T  48009244 tccgtttcaaaatgagtgtcgttttagtcaattgcacacatattaaggaatgaaataaaata 48009183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 215
Target Start/End: Original strand, 49426329 - 49426386
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaat 215  Q
    |||||||||||||||||||| ||| ||| ||||  |||||||||||| | ||||||||    
T  49426329 tactccatccgtttcaaaatgagtgtcgctttaggcaattgcacacatattaaggaat 49426386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 112; Significance: 3e-56; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 158 - 348
Target Start/End: Original strand, 12828592 - 12828783
Alignment:
Q  158 tactccatccgtt-tcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactg 256  Q
    |||||| |||||| ||||||| ||  ||||| || ||||||||||||| | ||| |||| ||||||||||||||||| |||||| |||||||||||||||    
T  12828592 tactccctccgttctcaaaatgagcgtcgttgtagccaattgcacacaaattaatgaatgaaatgaaataatcattagacataacacttttactaaactg 12828691  T
Q  257 cccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagttatagtatttattaagggtaaagttggaag 348  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||  |||||||||| ||||||||||||||||    
T  12828692 cccttactttataagaaaaagacaagcttaaagttgcattgaaaattgtgtgagagaaaagttgaagtatttattgagggtaaagttggaag 12828783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 108; E-Value: 8e-54
Query Start/End: Original strand, 157 - 348
Target Start/End: Original strand, 31275552 - 31275743
Alignment:
Q  157 ttactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactg 256  Q
    ||||||| ||||||||||||||||| | |||||| ||||||||||||||| |||||||  ||||||||||| ||||| || ||| |||||||| ||||||    
T  31275552 ttactccctccgtttcaaaataagtgttgttttagccaattgcacacagattaaggaaagaaatgaaataaccattagacgtaacacttttaccaaactg 31275651  T
Q  257 cccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagttatagtatttattaagggtaaagttggaag 348  Q
    |||||  |||||| |||||||||||||||||||||||||||||||||  |||||| |||||||  |||||||||| ||||||||||||||||    
T  31275652 cccttgttttatatgaaaaagacaaacttaaagttgcattgaaaattgtgtgagaaaaaagttggagtatttattgagggtaaagttggaag 31275743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 199 - 348
Target Start/End: Complemental strand, 29927407 - 29927258
Alignment:
Q  199 cacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattga 298  Q
    |||||||| |||  |||| |||||||||||||||| |||||| |||||||||||  |  |||||||||||||||||||||||||||||||||||||||||    
T  29927407 cacacagattaaaaaatagaatgaaataatcattagacataacacttttactaacatatccttactttataagaaaaagacaaacttaaagttgcattga 29927308  T
Q  299 aaattccgtgagagaaaagttatagtatttattaagggtaaagttggaag 348  Q
    ||| | | |||||||||||||  |||||||||| ||||||||||||||||    
T  29927307 aaactacatgagagaaaagttggagtatttattgagggtaaagttggaag 29927258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 218 - 348
Target Start/End: Complemental strand, 29915723 - 29915592
Alignment:
Q  218 aatgaaataatcattaaacataaaacttttactaaactgccctt-actttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaa 316  Q
    ||||||||||| |||| | |||| ||||||||||||||||| || |||||||||||||||||||||| ||||||||||||| |||||  |||||||||||    
T  29915723 aatgaaataataattagaaataacacttttactaaactgccatttactttataagaaaaagacaaacataaagttgcattggaaattgtgtgagagaaaa 29915624  T
Q  317 gttatagtatttattaagggtaaagttggaag 348  Q
    |||  |||||||||| ||||||||||||||||    
T  29915623 gttggagtatttattgagggtaaagttggaag 29915592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 15606130 - 15606268
Alignment:
Q  1 gtaaggctgctgcctccccctccaaaactgtcatattaacccgctgccatttcatttgagcccgaaaaaattgcctagagaagtctctaacacaacacgc 100  Q
    |||||||| ||||||||||||||||||||||||| ||  |||||||||||||  |||||||||||| || ||||| |  | ||||||||||||||||||     
T  15606130 gtaaggctactgcctccccctccaaaactgtcatgttttcccgctgccattttgtttgagcccgaataagttgcccatgggagtctctaacacaacacga 15606229  T
Q  101 aaaagatataatatggttacggtcatggaacgcggcatc 139  Q
    ||||||| ||||||||||||| || || || ||||||||    
T  15606230 aaaagatgtaatatggttacgatcgtgaaatgcggcatc 15606268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 198 - 346
Target Start/End: Original strand, 26669050 - 26669198
Alignment:
Q  198 gcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattg 297  Q
    ||||| ||| |||| |||| ||||||||||| |||  | ||||   |||||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  26669050 gcacaaagattaagaaatataatgaaataattattggatataacgtttttactaaattgcccttactttataagaaaaagacaaaattaaagttgcattg 26669149  T
Q  298 aaaattccgtgagagaaaagttatagtatttattaagggtaaagttgga 346  Q
    ||||||  ||||||||||||||  ||  |||||| ||| ||||||||||    
T  26669150 aaaattatgtgagagaaaagttggagattttattgaggataaagttgga 26669198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 15053311 - 15053446
Alignment:
Q  1 gtaaggctgctgcctccccctccaaaactgtcatattaacccgctgccatttcatttgagcccgaaaaaattgcctagagaagtctctaacacaacacgc 100  Q
    |||||||| |||||||||||||||| ||| ||||||| |||||||| ||| |  |||||||||||| |||||| | |  |||||||||||||||||||||    
T  15053311 gtaaggctactgcctccccctccaacactatcatatttacccgctgtcatcttgtttgagcccgaataaattgtccactgaagtctctaacacaacacgc 15053410  T
Q  101 aaaagatataatatggttacggtcatggaacgcggc 136  Q
    ||||||| ||| |||||||| | |||| ||||||||    
T  15053411 aaaagatgtaagatggttaccgacatgaaacgcggc 15053446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 218 - 348
Target Start/End: Original strand, 23936555 - 23936684
Alignment:
Q  218 aatgaaataatcattaaacataaaacttttactaaactgccctt-actttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaa 316  Q
    |||||||||||||||| | |||| | ||||||| || ||||||| ||||||||||||||| ||||| ||||||||||||||||||||  ||||||||||     
T  23936555 aatgaaataatcattagatataacatttttactgaattgccctttactttataagaaaaaaacaaatttaaagttgcattgaaaatt--gtgagagaaag 23936652  T
Q  317 gttatagtatttattaagggtaaagttggaag 348  Q
    |||  ||||| |||| ||||||||||||||||    
T  23936653 gttggagtatatattgagggtaaagttggaag 23936684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 14680213 - 14680076
Alignment:
Q  1 gtaaggctgctgcctccccctccaaaactgtcatattaacccgctgccatttcatttgagcccgaaaaaattgc---ctagagaagtctctaacacaaca 97  Q
    |||||||| |||||||||||||||| |||||||||||  |||||||||||||||||||||||  || |||||||   |    | ||||||||||||||||    
T  14680213 gtaaggctactgcctccccctccaatactgtcatattttcccgctgccatttcatttgagccataataaattgcccgccgcgggagtctctaacacaaca 14680114  T
Q  98 cgcaaaagatataatatggttacggtcatggaacgcgg 135  Q
     ||||||||| |||| ||||| ||||||||||||||||    
T  14680113 tgcaaaagatgtaatgtggttgcggtcatggaacgcgg 14680076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 28107190 - 28107059
Alignment:
Q  1 gtaaggctgctgcctccccctccaaaactgtcatattaacccgctgccatttcatttgagcccgaaaaaattgcctagagaagtctctaacacaacacgc 100  Q
    |||||||| |||||||||||||||||||||||||||    ||||||||||||| |||||||| ||| |||||| | |  | ||||||||||||||||| |    
T  28107190 gtaaggctactgcctccccctccaaaactgtcatatctgtccgctgccatttcgtttgagcctgaataaattgtccacgggagtctctaacacaacacac 28107091  T
Q  101 aaaagatataatatggttacggtcatggaacg 132  Q
     |||||| ||| ||||||||| ||||||||||    
T  28107090 gaaagatgtaagatggttacgatcatggaacg 28107059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 213 - 348
Target Start/End: Original strand, 11785069 - 11785205
Alignment:
Q  213 aataaaatgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaa-gacaaacttaaagttgcattgaaaattccgtgaga 311  Q
    |||||||| ||||| | |||| |||||| ||||||| ||||||| | ||| ||||||| ||||| || ||| ||||||||| ||||||||||  ||||||    
T  11785069 aataaaataaaatagttattagacataacacttttattaaactgtctttattttataataaaaaagataaatttaaagttgtattgaaaattgtgtgaga 11785168  T
Q  312 gaaaagttatagtatttattaagggtaaagttggaag 348  Q
    ||||||||| | |||||||| ||||||||||||||||    
T  11785169 gaaaagttagaatatttattgagggtaaagttggaag 11785205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 244 - 348
Target Start/End: Original strand, 17345132 - 17345238
Alignment:
Q  244 ttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgt--gagagaaaagttatagtatttattaagggtaaag 341  Q
    |||||||||| |  |||||||||||||||| ||||||||||| |||||||||||||||||  ||  ||||||||||||  |||||||||| |||||||||    
T  17345132 ttttactaaaataaccttactttataagaacaagacaaacttcaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgagggtaaag 17345231  T
Q  342 ttggaag 348  Q
    |||||||    
T  17345232 ttggaag 17345238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 165 - 344
Target Start/End: Complemental strand, 30627315 - 30627145
Alignment:
Q  165 tccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttact 264  Q
    ||||||| ||||| ||| ||||||||   ||||||||||| | ||| |||| ||||||||||||||||| | |||| |||||||||||| || ||         
T  30627315 tccgttttaaaatgagtgtcgttttagataattgcacacaaattaatgaatgaaatgaaataatcattagatataacacttttactaaagtgtcc----- 30627221  T
Q  265 ttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagttatagtatttattaagggtaaagttg 344  Q
        |||||||| ||||| ||||||||||||||||||||   |||||||||||||  |||||||||| ||||||||||||    
T  30627220 ----aagaaaaaaacaaatttaaagttgcattgaaaattgtttgagagaaaagtttgagtatttattgagggtaaagttg 30627145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 208 - 319
Target Start/End: Original strand, 1924636 - 1924747
Alignment:
Q  208 taaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgt 307  Q
    |||| |||| |||||||||||||||  | ||||   |||||||||||| | ||||||||||||| |||| ||||| ||||||||||||||||||||  ||    
T  1924636 taagaaatataatgaaataatcattggatataacgtttttactaaacttctcttactttataaggaaaatacaaaattaaagttgcattgaaaattgtgt 1924735  T
Q  308 gagagaaaagtt 319  Q
    ||||||||||||    
T  1924736 gagagaaaagtt 1924747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 225 - 344
Target Start/End: Original strand, 4123835 - 4123953
Alignment:
Q  225 taatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagttatagt 324  Q
    ||||||||| |||||| | ||||| ||||||  ||||| |||||||| |||| ||||||||||| ||||||||||||||  |||| |||||||||  |||    
T  4123835 taatcattacacataataattttattaaactatccttattttataaggaaaaaacaaacttaaa-ttgcattgaaaattgtgtgaaagaaaagttggagt 4123933  T
Q  325 atttattaagggtaaagttg 344  Q
    ||||||| ||||||||||||    
T  4123934 atttattgagggtaaagttg 4123953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 245 - 344
Target Start/End: Original strand, 10494760 - 10494860
Alignment:
Q  245 tttactaaactgcccttactttataagaaaa-agacaaacttaaagttgcattgaaaattccgtgagagaaaagttatagtatttattaagggtaaagtt 343  Q
    ||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||   |||||||||||||  | ||||||||  ||| ||||||    
T  10494760 tttactaaactacccttactttataagaaaaaagacaaactttaagttgcattgaaaattgtatgagagaaaagttggactatttattttgggcaaagtt 10494859  T
Q  344 g 344  Q
    |    
T  10494860 g 10494860  T

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Target: chr6; HSP #17
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 260 - 348
Target Start/End: Complemental strand, 34576684 - 34576594
Alignment:
Q  260 ttactttataagaaaaagacaaacttaaagttgcattgaaaattccgt--gagagaaaagttatagtatttattaagggtaaagttggaag 348  Q
    |||||||| ||||| |||||||||||||||||||||||||||||  ||  ||||||||||||  |||||||||| ||| ||||||||||||    
T  34576684 ttactttacaagaacaagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttgaagtatttattgaggataaagttggaag 34576594  T

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Target: chr6; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 258 - 348
Target Start/End: Complemental strand, 26189651 - 26189558
Alignment:
Q  258 ccttactttataagaaaaaga-caaacttaaagttgcattgaaaat--tccgtgagagaaaagttatagtatttattaagggtaaagttggaag 348  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||  |  ||||||||||| ||  |||||||||| ||||||||||||||||    
T  26189651 ccttactttataagaaaaaaaacaaacttaaagttgcattgaaaattgtgtgtgagagaaaaattggagtatttattgagggtaaagttggaag 26189558  T

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Target: chr6; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 208 - 317
Target Start/End: Original strand, 34439370 - 34439480
Alignment:
Q  208 taaggaataaaatgaaataatcattaaacataaaacttttactaaactgccctt-actttataagaaaaagacaaacttaaagttgcattgaaaattccg 306  Q
    |||| ||| ||||||||||||||||| | |||| | ||||| |||| ||||||| | |||||||||||||||||||| ||||||||||||| |||||  |    
T  34439370 taagaaatgaaatgaaataatcattagatataacatttttattaaattgccctttattttataagaaaaagacaaacataaagttgcattggaaattgtg 34439469  T
Q  307 tgagagaaaag 317  Q
    | |||||||||    
T  34439470 taagagaaaag 34439480  T

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Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 199 - 328
Target Start/End: Original strand, 4131901 - 4132027
Alignment:
Q  199 cacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattga 298  Q
    |||||| | |||| |||||||| |||||||||||| | |||| | |||||||||||| || ||| ||||||||||||  | ||||||||| |||||||||    
T  4131901 cacacatattaagaaataaaattaaataatcattatatataacatttttactaaactacctttattttataagaaaa--aaaaacttaaa-ttgcattga 4131997  T
Q  299 aaattccgtgagagaaaagttatagtattt 328  Q
    |||||  |||| |||||||||  |||||||    
T  4131998 aaattgtgtgaaagaaaagttggagtattt 4132027  T

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Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 183 - 345
Target Start/End: Complemental strand, 8052550 - 8052397
Alignment:
Q  183 tcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaa 282  Q
    ||||||||  |||||||||||| | |||| ||| ||||||||||||||||| |||||| ||||||| |||| ||| |         |||  |||||||||    
T  8052550 tcgttttagtcaattgcacacaaattaagaaatgaaatgaaataatcattagacataacacttttattaaaatgctc---------aagtgaaagacaaa 8052460  T
Q  283 cttaaagttgcattgaaaattccgtgagagaaaagttatagtatttattaagggtaaagttgg 345  Q
    | |||||||||||||||||||  | ||||||| ||||  |||||||||| |||||||| ||||    
T  8052459 cctaaagttgcattgaaaattgtgggagagaatagttggagtatttattgagggtaaaattgg 8052397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 161 - 348
Target Start/End: Complemental strand, 25932868 - 25932679
Alignment:
Q  161 tccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgccct 260  Q
    ||||||||||| ||||||||| |||||||| |||||| ||||| || |||| ||| |||| || || | |     ||||  | |||||||||| |  |||    
T  25932868 tccatccgttttaaaataagtgtcgttttagccaattacacaccgattaagaaatgaaataaagtagttaaatgtcatagcaattttactaaaataacct 25932769  T
Q  261 tactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagag--aaaagttatagtatttattaagggtaaagttggaag 348  Q
    |||||||||  || ||||||||||||||||| |||||||||||  |||||||  |||||||  |||||||||| ||| ||||||| ||||    
T  25932768 tactttatagcaacaagacaaacttaaagttacattgaaaattgtgtgagagaaaaaagtttgagtatttattgaggataaagttagaag 25932679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 107
Target Start/End: Original strand, 29368202 - 29368296
Alignment:
Q  11 tgcctccccctccaaaactgtcatattaacccgctgccatttcatttgagcccgaaaaaattg-cctagagaagtctctaacacaacacgcaaaagat 107  Q
    ||||||||||||||||||||||||||| | ||||||||||||| ||||||  |||| |||||| ||  ||| |||||| |||||||||||||||||||    
T  29368202 tgcctccccctccaaaactgtcatatttatccgctgccatttcttttgag--cgaataaattgtccacgag-agtctcaaacacaacacgcaaaagat 29368296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 30802127 - 30802201
Alignment:
Q  1 gtaaggctgctgcctccccctccaaaactgtcatattaacccgctgccatttcatttgagcccgaaaaaattgcc 75  Q
    |||||||| ||||||||||| ||||||||||||||||  |||||||||||||  ||| |||||||| ||||||||    
T  30802127 gtaaggctactgcctcccccaccaaaactgtcatatttgcccgctgccattttgtttaagcccgaataaattgcc 30802201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 193 - 293
Target Start/End: Complemental strand, 6992608 - 6992508
Alignment:
Q  193 caattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaacttaaagttg 292  Q
    |||||||||||||| |||| ||| |||| ||||| |||   | ||||  | |||||||||| |  |||||||||||||||||||||||||||||||||||    
T  6992608 caattgcacacagattaagaaatgaaataaaatagtcaaacatcatagtaattttactaaaataaccttactttataagaaaaagacaaacttaaagttg 6992509  T
Q  293 c 293  Q
    |    
T  6992508 c 6992508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 11731806 - 11731865
Alignment:
Q  4 aggctgctgcctccccctccaaaactgtcatattaacccgctgccatttcatttgagcccg 64  Q
    |||||||||||||||| |||||||||||||||||  |||||||||||||  ||||||||||    
T  11731806 aggctgctgcctcccc-tccaaaactgtcatatttgcccgctgccattttgtttgagcccg 11731865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 470 - 520
Target Start/End: Complemental strand, 26542557 - 26542507
Alignment:
Q  470 gattttggaaaaagctattcctaatagcttttcattttagagtcaaaatag 520  Q
    |||||||  ||||| || |||||||||||||||||||||||||||||||||    
T  26542557 gattttgagaaaagttaatcctaatagcttttcattttagagtcaaaatag 26542507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 260 - 348
Target Start/End: Complemental strand, 6140739 - 6140649
Alignment:
Q  260 ttactttataagaaaaagacaaacttaaagttgcattgaaaattccgt--gagagaaaagttatagtatttattaagggtaaagttggaag 348  Q
    |||||||||| |||||||| |   ||||| ||||||||||||||  ||  ||||||||||||  |||||||||| | ||||||||||||||    
T  6140739 ttactttatatgaaaaagatatgtttaaaattgcattgaaaattgtgtaagagagaaaagtttaagtatttattgaaggtaaagttggaag 6140649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 410 - 445
Target Start/End: Original strand, 12828847 - 12828882
Alignment:
Q  410 ggctaaaatgacattcattttgaaacggagggagta 445  Q
    ||||||||||||||||||||||||||||| ||||||    
T  12828847 ggctaaaatgacattcattttgaaacggatggagta 12828882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 479 - 520
Target Start/End: Original strand, 27841034 - 27841075
Alignment:
Q  479 aaaagctattcctaatagcttttcattttagagtcaaaatag 520  Q
    |||| ||| ||||||||||||||||||||||||| |||||||    
T  27841034 aaaaactaatcctaatagcttttcattttagagttaaaatag 27841075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 107; Significance: 3e-53; HSPs: 65)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 158 - 348
Target Start/End: Original strand, 166561 - 166751
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgc 257  Q
    |||||| ||||||||||||| ||| |||  ||| ||||||||||||||| |||||||| ||||||||||||||||| | |||| ||||||||||||||||    
T  166561 tactccctccgtttcaaaatgagtgtcgcgttagccaattgcacacagattaaggaatgaaatgaaataatcattagaaataacacttttactaaactgc 166660  T
Q  258 ccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagttatagtatttattaagggtaaagttggaag 348  Q
    ||||   ||||| |||||||||||||||||||||||||||||||||  |||||| |||||||  |||||||||| ||||||||||||||||    
T  166661 ccttgtattatatgaaaaagacaaacttaaagttgcattgaaaattgtgtgagaaaaaagttggagtatttattgagggtaaagttggaag 166751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 157 - 348
Target Start/End: Complemental strand, 36660667 - 36660478
Alignment:
Q  157 ttactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactg 256  Q
    ||||||| || |||||||||| ||| ||| |||| | ||||||||||||| |||||||| ||||||||||||||||| |||||| |||||||||||| ||    
T  36660667 ttactccctctgtttcaaaatgagtgtcgctttagctaattgcacacagattaaggaatgaaatgaaataatcattagacataacacttttactaaaatg 36660568  T
Q  257 cccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagttatagtatttattaagggtaaagttggaag 348  Q
     ||||||||||||||||||||||||||||||||||| ||  ||||||  |||||||||||| |  |||||||||| ||||||||||||||||    
T  36660567 tccttactttataagaaaaagacaaacttaaagttgtataaaaaatt--gtgagagaaaagctggagtatttattgagggtaaagttggaag 36660478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 165 - 348
Target Start/End: Complemental strand, 36783589 - 36783406
Alignment:
Q  165 tccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttact 264  Q
    ||||||||||||| ||||||| |||| ||||||||||||||| ||||  || ||||||||||||||||| |||||| | |||||||||| ||||||||||    
T  36783589 tccgtttcaaaatgagtatcgctttagccaattgcacacagattaagagatgaaatgaaataatcattagacataacatttttactaaattgcccttact 36783490  T
Q  265 ttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagttatagtatttattaagggtaaagttggaag 348  Q
    |  || |||||||||||| ||||||||||||||||||||  ||||||||||||||  || ||||| ||||||||||||| ||||    
T  36783489 tgttatgaaaaagacaaatttaaagttgcattgaaaattgtgtgagagaaaagttggagaatttactaagggtaaagttagaag 36783406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 168 - 348
Target Start/End: Original strand, 4751452 - 4751632
Alignment:
Q  168 gtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttacttta 267  Q
    |||| ||||| ||| |||||||| ||||||||||||| | |||||||| ||||||||||||||||| |||||| |||||||||||||  |||||  ||||    
T  4751452 gttttaaaatgagtgtcgttttagccaattgcacacatattaaggaatgaaatgaaataatcattagacataacacttttactaaacaacccttgtttta 4751551  T
Q  268 taagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagttatagtatttattaagggtaaagttggaag 348  Q
    || |||||| ||||||||||||||| ||||||||||  |||||| |||||||  |||||||||| ||||||||||||||||    
T  4751552 tatgaaaaaaacaaacttaaagttgaattgaaaattgtgtgagaaaaaagttggagtatttattgagggtaaagttggaag 4751632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 158 - 303
Target Start/End: Original strand, 43257773 - 43257917
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgc 257  Q
    |||||| ||||||| ||||| ||| | |||||| ||||||||||||||| ||| |||| ||||||||||||||||| |||||| |||| |||||||||||    
T  43257773 tactccctccgttttaaaatgagtgt-gttttagccaattgcacacagattaaagaatgaaatgaaataatcattagacataacacttatactaaactgc 43257871  T
Q  258 ccttactttataagaaaaagacaaacttaaagttgcattgaaaatt 303  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||    
T  43257872 ccttactttataagaaatagacaaacttaaagttgcattgaaaatt 43257917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 168 - 348
Target Start/End: Original strand, 4742188 - 4742368
Alignment:
Q  168 gtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttacttta 267  Q
    |||| ||||| ||| ||||||||  |||||||||||| | |||||||| ||||||||||||||| | |||||| |||||||||||||  |||||  ||||    
T  4742188 gttttaaaatgagtgtcgttttagtcaattgcacacatattaaggaatgaaatgaaataatcatcagacataacacttttactaaacaacccttgtttta 4742287  T
Q  268 taagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagttatagtatttattaagggtaaagttggaag 348  Q
    || |||||| ||||||||||||||| ||||||||||  |||||| |||||||  |||||||||| ||||||||||||||||    
T  4742288 tatgaaaaaaacaaacttaaagttgaattgaaaattgtgtgagaaaaaagttggagtatttattgagggtaaagttggaag 4742368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 165 - 319
Target Start/End: Original strand, 12167529 - 12167684
Alignment:
Q  165 tccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttact 264  Q
    ||||||||||||| ||| ||| |||| | ||||||||||| | |||| |||  |||||||||||||||| ||| || |||||||||||||||||||||||    
T  12167529 tccgtttcaaaatgagtgtcgctttagctaattgcacacaaattaagaaattgaatgaaataatcattagacaaaacacttttactaaactgcccttact 12167628  T
Q  265 ttataagaaaaagacaaacttaaagttgcattgaaaa-ttccgtgagagaaaagtt 319  Q
    ||||||||||| | ||||||||||||||||||||||| ||  ||||||||||||||    
T  12167629 ttataagaaaaggtcaaacttaaagttgcattgaaaatttgtgtgagagaaaagtt 12167684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 157 - 345
Target Start/End: Original strand, 38982065 - 38982244
Alignment:
Q  157 ttactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactg 256  Q
    ||||| ||||||||||||||| | | |||||||| ||||||||||||| | |||||||| ||||||||||||| | | || ||| ||||||| |||||||    
T  38982065 ttacttcatccgtttcaaaatgaatgtcgttttagccaattgcacacaaattaaggaatgaaatgaaataatcttaagacgtaacacttttattaaactg 38982164  T
Q  257 cccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagttatagtatttattaagggtaaagttgg 345  Q
    |||         |||||||||||||||||||||||||||||||||||  | ||||||||||||  |||||||||| |||||||||||||    
T  38982165 ccc---------aagaaaaagacaaacttaaagttgcattgaaaattgtgcgagagaaaagtttgagtatttattgagggtaaagttgg 38982244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 164 - 348
Target Start/End: Original strand, 42329462 - 42329648
Alignment:
Q  164 atccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttac 263  Q
    |||||||||||||| ||||||| |||| ||||||||||||| | |||||||| |||| || || |||     ||||  | |||||||||| |  ||||||    
T  42329462 atccgtttcaaaatgagtatcgctttaaccaattgcacacaaattaaggaatgaaataaagtagtcaaatgtcatagcaattttactaaaataaccttac 42329561  T
Q  264 tttataagaaaaagacaaacttaaagttgcattgaaaattccgt--gagagaaaagttatagtatttattaagggtaaagttggaag 348  Q
    |||||||||| |||||||||||||||||||||||||||||  ||  ||||||||||||  |||||||||||||||||||||||||||    
T  42329562 tttataagaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttgaagtatttattaagggtaaagttggaag 42329648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 165 - 319
Target Start/End: Original strand, 8960954 - 8961107
Alignment:
Q  165 tccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttact 264  Q
    ||||||| ||||| ||| ||||||||| ||||| |||| | | ||||||||| ||| |||||||||||| |||||| |||||||||||||||  |||| |    
T  8960954 tccgttttaaaatgagtgtcgttttactcaattacacatatattaaggaatataataaaataatcattagacataacacttttactaaactg-tcttatt 8961052  T
Q  265 ttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagtt 319  Q
    |||||||||||||| ||| ||||||||||| ||||||||  ||||||||||||||    
T  8961053 ttataagaaaaagataaatttaaagttgcaatgaaaattgtgtgagagaaaagtt 8961107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 12660367 - 12660229
Alignment:
Q  1 gtaaggctgctgcctccccctccaaaactgtcatattaacccgctgccatttcatttgagcccgaaaaaattgcctagagaagtctctaacacaacacgc 100  Q
    ||||| || ||||||||| ||| || |||||||||||  |||||||||||||| |||||||||||| |||||| | |   ||||||||||||||||||||    
T  12660367 gtaagactactgcctcccgctctaacactgtcatatttgcccgctgccatttcgtttgagcccgaataaattgtccatgaaagtctctaacacaacacgc 12660268  T
Q  101 aaaagatataatatggttacggtcatggaacgcggcatc 139  Q
    ||||||| ||| ||||||||| |||||||||||||||||    
T  12660267 aaaagatgtaagatggttacgttcatggaacgcggcatc 12660229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 22767393 - 22767531
Alignment:
Q  1 gtaaggctgctgcctccccctccaaaactgtcatattaacccgctgccatttcatttgagcccgaaaaaattgcctagagaagtctctaacacaacacgc 100  Q
    |||||||| ||||||||||||||||||| ||||||||  |||| ||||||||| |||||||||||| ||||||||    | | |||||||||||||||||    
T  22767393 gtaaggctactgcctccccctccaaaacagtcatatttgcccgttgccatttcgtttgagcccgaataaattgcccccgggaatctctaacacaacacgc 22767492  T
Q  101 aaaagatataatatggttacggtcatggaacgcggcatc 139  Q
    ||||||| ||| ||| |||| ||||||||||||||||||    
T  22767493 aaaagatgtaagatgattactgtcatggaacgcggcatc 22767531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 169 - 287
Target Start/End: Complemental strand, 34919965 - 34919847
Alignment:
Q  169 tttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttactttat 268  Q
    ||||||||| ||||||| |||| |||||| |||||||| |||||||| |||| |||||||||||  |||||  | |||||||||||||||||||||||||    
T  34919965 tttcaaaatgagtatcgctttagccaattacacacagattaaggaatgaaataaaataatcattggacatagcaattttactaaactgcccttactttat 34919866  T
Q  269 aagaaaaagacaaacttaa 287  Q
    |||||||||||||||||||    
T  34919865 aagaaaaagacaaacttaa 34919847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 158 - 303
Target Start/End: Original strand, 14979963 - 14980108
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgc 257  Q
    |||||| ||||||||||||| ||| ||| ||||  |  | ||||||||| |||| |||  |||||||||||||||  | |||| |||||||| |||||||    
T  14979963 tactccctccgtttcaaaatgagtgtcgctttaggctttggcacacagattaagaaatggaatgaaataatcattggatataacacttttaccaaactgc 14980062  T
Q  258 ccttactttataagaaaaagacaaacttaaagttgcattgaaaatt 303  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  14980063 ccttactttataagaaaaagacaaaattaaagttgcattgaaaatt 14980108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 4268150 - 4268031
Alignment:
Q  1 gtaaggctgctgcctccccctccaaaactgtcatattaacccgctgccatttcatttgagcccgaaaaaattgccta-gagaagtctctaacacaacacg 99  Q
    |||||||| ||||||||||||||||||||||||||||  |||||||||||||  |||||||| ||| |||||||| | ||| ||||||||||||||||||    
T  4268150 gtaaggctactgcctccccctccaaaactgtcatatttgcccgctgccattttgtttgagcctgaataaattgcccacgag-agtctctaacacaacacg 4268052  T
Q  100 caaaagatataatatggttac 120  Q
    |||||||| ||||||||||||    
T  4268051 caaaagatgtaatatggttac 4268031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 158 - 343
Target Start/End: Complemental strand, 4371591 - 4371419
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgc 257  Q
    |||||| ||||||||||||| ||| |||||||| | ||||||||||| | ||||||||  |||||||||||||||| |||||  ||||||||||||||||    
T  4371591 tactccctccgtttcaaaatgagtgtcgttttaactaattgcacacaaattaaggaatggaatgaaataatcattagacatagcacttttactaaactgc 4371492  T
Q  258 ccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagttatagtatttattaagggtaaagtt 343  Q
    |         ||||||||||||||    ||||||||||||||||||  ||||||||||||||  |||||||||| |||||||||||    
T  4371491 c---------taagaaaaagacaa----aaagttgcattgaaaattgtgtgagagaaaagtttgagtatttattgagggtaaagtt 4371419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 244 - 347
Target Start/End: Complemental strand, 34171318 - 34171215
Alignment:
Q  244 ttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagttatagtatttattaagggtaaagtt 343  Q
    |||||||||| |  |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||  |||||||||| | |||||||||    
T  34171318 ttttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaaattctgtgagagaaaagtttgagtatttattgaaggtaaagtt 34171219  T
Q  344 ggaa 347  Q
    ||||    
T  34171218 ggaa 34171215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 165 - 348
Target Start/End: Complemental strand, 39060034 - 39059856
Alignment:
Q  165 tccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttact 264  Q
    ||||||| ||||| ||||||  |||| ||||||| ||| ||| ||||||||     ||||||||||||| |||||| |||||||||||||| |||||  |    
T  39060034 tccgtttaaaaatgagtatcactttagccaattgtacatagattaaggaat-----gaaataatcattagacataacacttttactaaactacccttgtt 39059940  T
Q  265 ttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagttatagtatttattaagggtaaagttggaag 348  Q
    ||||| |||||| ||||||||||||||||||||||||||   ||||| |||| ||  |||||||||| ||||||||||| ||||    
T  39059939 ttatatgaaaaaaacaaacttaaagttgcattgaaaattgtatgagaaaaaatttggagtatttattgagggtaaagttagaag 39059856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 199 - 319
Target Start/End: Complemental strand, 31889919 - 31889799
Alignment:
Q  199 cacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattga 298  Q
    |||||||| |||| |||  ||||||||||| ||| || ||||   ||| ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  31889919 cacacagattaagaaatggaatgaaataattattgaatataacgttttcactaaactgcccttactttataagaaaaagacaaaattaaagttgcattga 31889820  T
Q  299 aaattccgtgagagaaaagtt 319  Q
    |||||  ||||||||||||||    
T  31889819 aaattgtgtgagagaaaagtt 31889799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 11375649 - 11375787
Alignment:
Q  1 gtaaggctgctgcctccccctccaaaactgtcatattaacccgctgccatttcatttgagcccgaaaaaattgcct-agagaagtctctaacacaacacg 99  Q
    |||||||| ||| |||||||||||||||||||||||| || |||||||||||| |||||| ||||| ||||  |||  ||| |||||||||||||||| |    
T  11375649 gtaaggctactgtctccccctccaaaactgtcatatttactcgctgccatttcgtttgagtccgaataaatcacctgcgag-agtctctaacacaacatg 11375747  T
Q  100 caaaagatataatatggttacggtcatggaacgcggcatc 139  Q
    |||||| | ||||||||||||| ||||||||||| |||||    
T  11375748 caaaagttgtaatatggttacgttcatggaacgcagcatc 11375787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 15988885 - 15989023
Alignment:
Q  1 gtaaggctgctgcctccccctccaaaactgtcatattaacccgctgccatttcatttgagcccgaaaaaattgc-ctagagaagtctctaacacaacacg 99  Q
    |||||| | ||||||||||||||||||||||||||||   ||||||||||||| |||||||||||| ||||||| |  || |||||||| ||| ||||||    
T  15988885 gtaaggttactgcctccccctccaaaactgtcatatttgtccgctgccatttcgtttgagcccgaataaattgctcgcga-aagtctctgacataacacg 15988983  T
Q  100 caaaagatataatatggttacggtcatggaacgcggcatc 139  Q
    |||||| | |||||||||| ||||||||||||||| ||||    
T  15988984 caaaagttgtaatatggttgcggtcatggaacgcgacatc 15989023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 208 - 314
Target Start/End: Original strand, 31557302 - 31557409
Alignment:
Q  208 taaggaataaaatgaaataatcattaaacataaaacttttactaaactgccctt-actttataagaaaaagacaaacttaaagttgcattgaaaattccg 306  Q
    |||| |||| |||||||||||||||||| |||| ||||||| |||||  ||||| ||||||||||||||||||||||||||||||||||||||||||  |    
T  31557302 taagaaatagaatgaaataatcattaaatataatacttttagtaaacaaccctttactttataagaaaaagacaaacttaaagttgcattgaaaattgtg 31557401  T
Q  307 tgagagaa 314  Q
    ||||||||    
T  31557402 tgagagaa 31557409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 152 - 301
Target Start/End: Original strand, 4967397 - 4967546
Alignment:
Q  152 atgtgttactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttacta 251  Q
    |||| ||||||| ||||||||||||| ||| ||| ||||  |  |  |||||||| |||| |||  |||||||||||||||  | ||||  |||||||||    
T  4967397 atgtattactccctccgtttcaaaatgagtgtcgctttaggctttgacacacagattaagaaatggaatgaaataatcattggatataacgcttttacta 4967496  T
Q  252 aactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaa 301  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  4967497 aactgcccttactttataaaaaaaagacaaaattaaagttgcattgaaaa 4967546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 30222935 - 30223068
Alignment:
Q  1 gtaaggctgctgcctccccctccaaaactgtcatattaacccgctgccatttcatttgagcccgaaaaaattgcctagagaagtctctaacacaacacgc 100  Q
    |||| ||| ||| ||||| |||||||||||||| |||  |  ||||| | ||| |||||||||||| |||||||| |  |||||||||||||||||||||    
T  30222935 gtaaagctactgtctccctctccaaaactgtcaaattcgcttgctgcaaattcgtttgagcccgaataaattgcccatggaagtctctaacacaacacgc 30223034  T
Q  101 aaaagatataatatggttacggtcatggaacgcg 134  Q
    ||||||| |||||||||||| |||||||||||||    
T  30223035 aaaagatgtaatatggttacagtcatggaacgcg 30223068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 158 - 319
Target Start/End: Complemental strand, 33693971 - 33693811
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgc 257  Q
    |||||| ||||||| ||||||||| |||||||| |||||| |||| | | ||| ||||  |||||||||||||||| || ||| ||||||||| ||||||    
T  33693971 tactccttccgttttaaaataagtgtcgttttagccaattacacatatattaaagaatgcaatgaaataatcattagacgtaacacttttact-aactgc 33693873  T
Q  258 ccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagtt 319  Q
    ||||| ||||||| ||||  | || |||||||||||||||||||||  |||||| |||||||    
T  33693872 ccttattttataaaaaaataataagcttaaagttgcattgaaaattgtgtgagaaaaaagtt 33693811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 158 - 344
Target Start/End: Original strand, 33822413 - 33822601
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgc 257  Q
    |||||| ||||||||||||| | |||||||||| ||||||||||||||| |||  ||| |||| ||||| |||      |||  | |||||||||| |      
T  33822413 tactccctccgtttcaaaatgaatatcgttttaaccaattgcacacagattaattaatgaaataaaatagtcaaatgttatagcaattttactaaaataa 33822512  T
Q  258 ccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgt--gagagaaaagttatagtatttattaagggtaaagttg 344  Q
    |||||||||||||||| |||||||||||||||||||||||||||||  ||  ||||||||||||  |||||||||| | ||||||||||    
T  33822513 ccttactttataagaacaagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttgaagtatttattgaaggtaaagttg 33822601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 25730859 - 25730725
Alignment:
Q  1 gtaaggctgctgcctccccctccaaaactgtcatattaacccgctgccatttcatttgagcccgaaaaaattgcctagagaagtctctaacacaacacgc 100  Q
    |||||||| ||||||||||||||||||||||||||||  |||||||||||||| ||||||| |||| ||||| ||      || |||||||||||||||     
T  25730859 gtaaggctactgcctccccctccaaaactgtcatatttgcccgctgccatttcgtttgagctcgaataaatttcccgcgtgagactctaacacaacacgt 25730760  T
Q  101 aaaagatataatatggttacggtcatggaacgcgg 135  Q
     |||  | |||||||||||||||||||||||||||    
T  25730759 gaaaattgtaatatggttacggtcatggaacgcgg 25730725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 11 - 139
Target Start/End: Original strand, 27533052 - 27533181
Alignment:
Q  11 tgcctccccctccaaaactgtcatattaacccgctgccatttcatttgagcccgaaaaaattgcctagagaagtctctaacacaacacgc-aaaagatat 109  Q
    ||||||||||||||||||||| |||||  || ||| ||||||| |||||||||||| |||||||| |  | ||||||||||||||||||| ||||||| |    
T  27533052 tgcctccccctccaaaactgttatattttcctgctaccatttcgtttgagcccgaataaattgcccacgggagtctctaacacaacacgcaaaaagatgt 27533151  T
Q  110 aatatggttacggtcatggaacgcggcatc 139  Q
    ||  |||||||| |||||||||||| ||||    
T  27533152 aaactggttacgatcatggaacgcgacatc 27533181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 157 - 348
Target Start/End: Complemental strand, 15400414 - 15400222
Alignment:
Q  157 ttactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactg 256  Q
    ||||||| ||||||| ||||| ||| ||||||||     | ||||||||| |||  |||  ||||||||||| |||| | |||| |||||||||||| |     
T  15400414 ttactccctccgttttaaaatgagtgtcgttttaggtgttggcacacagattaaaaaattgaatgaaataattattagatataacacttttactaaaatt 15400315  T
Q  257 ccctt-actttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagttatagtatttattaagggtaaagttggaag 348  Q
    ||||| ||||||||||||||||  |||||||||||| ||||| |||||   |||||||||||||  |||||||||| ||| ||||||||||||    
T  15400314 ccctttactttataagaaaaaggaaaacttaaagtttcattggaaattgtatgagagaaaagtttgagtatttattgaggataaagttggaag 15400222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 244 - 348
Target Start/End: Original strand, 793602 - 793708
Alignment:
Q  244 ttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgt--gagagaaaagttatagtatttattaagggtaaag 341  Q
    |||||||||| |  |||||||||||||||| |||||||||||||||||||||||||||||  ||  ||||||||||||  |||||||||| |||||| ||    
T  793602 ttttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaaattgtgtgagagagaaaagtttaagtatttattgagggtagag 793701  T
Q  342 ttggaag 348  Q
    |||||||    
T  793702 ttggaag 793708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 217 - 319
Target Start/End: Original strand, 7388163 - 7388263
Alignment:
Q  217 aaatgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaa 316  Q
    |||| |||||||||||| |||||| | |||||||||| || ||||| ||||||||||||||| ||| ||||||||||||||||||||  |||||||||||    
T  7388163 aaataaaataatcattagacataatatttttactaaattgtccttattttataagaaaaagataaatttaaagttgcattgaaaatt--gtgagagaaaa 7388260  T
Q  317 gtt 319  Q
    |||    
T  7388261 gtt 7388263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 183 - 319
Target Start/End: Complemental strand, 16886285 - 16886156
Alignment:
Q  183 tcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaa 282  Q
    |||||||| |||||||| ||||||  ||||||| |||||||||||| |||| || ||| || |||||||||||||||||||||||||| |       |||    
T  16886285 tcgttttagccaattgcgcacagatcaaggaatgaaatgaaataattattagacgtaacacatttactaaactgcccttactttataaca-------aaa 16886193  T
Q  283 cttaaagttgcattgaaaattccgtgagagaaaagtt 319  Q
    |||||||||||||||||||||  |||| |||||||||    
T  16886192 cttaaagttgcattgaaaattgtgtgatagaaaagtt 16886156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 20205006 - 20204868
Alignment:
Q  1 gtaaggctgctgcctccccctccaaaactgtcatattaacccgctgccatttcatttgagcccgaaaaaattgcctagagaagtctctaacacaacacgc 100  Q
    |||||||| |||||||||||||||| |||||||||||  |||| ||||||||| |||||||| | | ||||| ||    | |||||||| ||||| | |     
T  20205006 gtaaggctactgcctccccctccaatactgtcatatttgcccgttgccatttcgtttgagcctggataaatttcccgcgggagtctctagcacaaaatgt 20204907  T
Q  101 aaaagatataatatggttacggtcatggaacgcggcatc 139  Q
    ||||||| ||||||||||| |||||||||||||||||||    
T  20204906 aaaagatgtaatatggttatggtcatggaacgcggcatc 20204868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 157 - 344
Target Start/End: Original strand, 27652230 - 27652419
Alignment:
Q  157 ttactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactg 256  Q
    ||||| ||||||||| ||||| ||| ||| ||||  ||||| |||||||| |||| |||  ||| ||||| |||     ||||| | |||||||||| |     
T  27652230 ttacttcatccgttttaaaatgagtgtcgctttaggcaattacacacagattaagaaatggaataaaatagtcaaatgtcataacaattttactaaaata 27652329  T
Q  257 cccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgt--gagagaaaagttatagtatttattaagggtaaagttg 344  Q
     ||||||||||||||||||||||||| ||||||||||||||||||||  ||  ||||||||||||  | |||||||| ||||||||||||    
T  27652330 accttactttataagaaaaagacaaatttaaagttgcattgaaaattgtgtgagagagaaaagttggattatttattgagggtaaagttg 27652419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 157 - 348
Target Start/End: Original strand, 29653423 - 29653616
Alignment:
Q  157 ttactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactg 256  Q
    ||||||| ||| ||| ||||| ||| |||||||| ||||||||| || || ||| |||| |||| ||||| |||     ||||  | |||||||||| |     
T  29653423 ttactccctccattttaaaatgagtgtcgttttagccaattgcatacggattaaagaatgaaataaaatagtcaaatgtcatagcaattttactaaaata 29653522  T
Q  257 cccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgt--gagagaaaagttatagtatttattaagggtaaagttggaag 348  Q
     | |||||||||||||| ||||||||||||||||||||||  |||||  ||  ||||||||||||| |||||||||| ||||||||||||||||    
T  29653523 acgttactttataagaacaagacaaacttaaagttgcattagaaattgtgtgagagagaaaagttagagtatttattgagggtaaagttggaag 29653616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 199 - 303
Target Start/End: Complemental strand, 1513179 - 1513075
Alignment:
Q  199 cacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattga 298  Q
    |||||| | |||| ||| |||||||||||||||||||||||| ||||||   ||||| ||||||||||| |||| ||| |||||||||||||||| ||||    
T  1513179 cacacaaattaagaaatgaaatgaaataatcattaaacataatacttttttcaaactacccttactttacaagagaaaaacaaacttaaagttgctttga 1513080  T
Q  299 aaatt 303  Q
    |||||    
T  1513079 aaatt 1513075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 8388137 - 8387999
Alignment:
Q  1 gtaaggctgctgcctccccctccaaaactgtcatattaacccgctgccatttcatttgagcccgaaaaaattgccta-gagaagtctctaacacaacacg 99  Q
    |||||||  ||||||||||||||||||||||||||||    || ||||||||| |||||||| |||  ||||||| | |||| |||||||||||||||||    
T  8388137 gtaaggcaactgcctccccctccaaaactgtcatatttgttcgttgccatttcgtttgagcctgaatgaattgcccacgaga-gtctctaacacaacacg 8388039  T
Q  100 caaaagatataatatggttacggtcatggaacgcggcatc 139  Q
    | |||||| ||||||  | ||||||||| |||||||||||    
T  8388038 cgaaagatgtaatattttaacggtcatgaaacgcggcatc 8387999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 160 - 258
Target Start/End: Original strand, 24436454 - 24436552
Alignment:
Q  160 ctccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgcc 258  Q
    |||| ||||||| ||||| ||| |||||||| ||||||||||| ||| |||||||||||||||||||||||||| | |||| |||||||| ||| ||||    
T  24436454 ctccctccgttttaaaatgagtgtcgttttagccaattgcacatagattaaggaataaaatgaaataatcattagatataacacttttaccaaaatgcc 24436552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 26597593 - 26597731
Alignment:
Q  1 gtaaggctgctgcctccccctccaaaactgtcatattaacccgctgccatttcatttgagcccgaaaaaattgcctagagaagtctctaacacaacacgc 100  Q
    |||||||  |||||||||||||||||| |||||||||  | || ||||||||| ||||||||||||  ||||| | |  | |||||||||||||||||||    
T  26597593 gtaaggcaactgcctccccctccaaaattgtcatatttgctcgttgccatttcgtttgagcccgaatgaattgtccacgggagtctctaacacaacacgc 26597692  T
Q  101 aaaagatataatatggttacggtcatggaacgcggcatc 139  Q
     |||||| ||||||| | | | ||||| |||||||||||    
T  26597693 gaaagatgtaatatgttgatgatcatgaaacgcggcatc 26597731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 272 - 348
Target Start/End: Original strand, 4833657 - 4833735
Alignment:
Q  272 aaaaagacaaacttaaagttgcattgaaaattccgtg--agagaaaagttatagtatttattaagggtaaagttggaag 348  Q
    ||||||||||||||||||||||||||||||||  |||  |||||||||||  |||||||||| ||||||||||||||||    
T  4833657 aaaaagacaaacttaaagttgcattgaaaattgtgtgaaagagaaaagtttgagtatttattgagggtaaagttggaag 4833735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 244 - 348
Target Start/End: Original strand, 33584971 - 33585077
Alignment:
Q  244 ttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgag--agaaaagttatagtatttattaagggtaaag 341  Q
    |||||||||| |  |||||||||| | ||| |||||||||||||||||||||||||||||  |||||  |||||||||  |||||||||| | |||||||    
T  33584971 ttttactaaaataaccttactttacatgaacaagacaaacttaaagttgcattgaaaattgtgtgagacagaaaagttggagtatttattgaaggtaaag 33585070  T
Q  342 ttggaag 348  Q
    |||||||    
T  33585071 ttggaag 33585077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 185 - 347
Target Start/End: Complemental strand, 12992267 - 12992114
Alignment:
Q  185 gttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaact 284  Q
    |||||| ||||||||| ||| | |||||||| ||||||||||||||||| |||||| |||||||||||||||  |         ||||||| || |||      
T  12992267 gttttagccaattgcatacaaattaaggaatgaaatgaaataatcattagacataacacttttactaaactggtc---------aagaaaaggaaaaatc 12992177  T
Q  285 taaagttgcattgaaaattccgtgagagaaaagttatagtatttattaagggtaaagttggaa 347  Q
    |||||||||||||||||||  |  |||||||||||  |||||||||| ||| |||||||||||    
T  12992176 taaagttgcattgaaaattgtgcaagagaaaagttggagtatttattgaggataaagttggaa 12992114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 185 - 347
Target Start/End: Complemental strand, 13066918 - 13066765
Alignment:
Q  185 gttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaact 284  Q
    |||||| ||||||||| ||| | |||||||| ||||||||||||||||| ||| || |||||||||||||||  |         ||||||| || |||      
T  13066918 gttttagccaattgcatacaaattaaggaatgaaatgaaataatcattagacacaacacttttactaaactggtc---------aagaaaaggaaaaatc 13066828  T
Q  285 taaagttgcattgaaaattccgtgagagaaaagttatagtatttattaagggtaaagttggaa 347  Q
    |||||||||||||||||||  |  |||||||||||  |||||||||| |||||||||||||||    
T  13066827 taaagttgcattgaaaattgtgcaagagaaaagttggagtatttattgagggtaaagttggaa 13066765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 259 - 348
Target Start/End: Complemental strand, 29044860 - 29044770
Alignment:
Q  259 cttactttataagaaaaagacaaacttaaagttgcattgaaaattccgt-gagagaaaagttatagtatttattaagggtaaagttggaag 348  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||  || ||||||||||||  || ||||||| ||| ||||||||||||    
T  29044860 cttactttataagaataagataaacttaaagttgcattgaaaattgtgtggagagaaaagtttgagcatttattgaggataaagttggaag 29044770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 267 - 348
Target Start/End: Complemental strand, 33741597 - 33741516
Alignment:
Q  267 ataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagttatagtatttattaagggtaaagttggaag 348  Q
    |||||||||||| |||||||||||||||||| |||||  |||  |||||||||| ||||| |||||||||||||||| ||||    
T  33741597 ataagaaaaagataaacttaaagttgcattggaaattgtgtggtagaaaagttagagtatatattaagggtaaagtttgaag 33741516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 27292485 - 27292354
Alignment:
Q  1 gtaaggctgctgcctccccctccaaaactgtcatattaacccgctgccatttcatttgagcccgaaaaaattgccta-gagaagtctctaacacaacacg 99  Q
    ||||||||  ||||||||||| ||||||  | |||||   ||||||||||||  |||||||||||| |||||||| | |||| ||||||||||||||| |    
T  27292485 gtaaggctattgcctcccccttcaaaacaataatatttgtccgctgccattttgtttgagcccgaataaattgcccacgaga-gtctctaacacaacatg 27292387  T
Q  100 caaaagatataatatggttacggtcatggaacg 132  Q
    ||||| || ||||||||||||  ||||||||||    
T  27292386 caaaatatgtaatatggttactatcatggaacg 27292354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 268 - 344
Target Start/End: Original strand, 32690753 - 32690829
Alignment:
Q  268 taagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagttatagtatttattaagggtaaagttg 344  Q
    |||||||||||||||| |||||||||||||||||||  | ||||||||||||  |||||||||| || |||||||||    
T  32690753 taagaaaaagacaaacctaaagttgcattgaaaattgtgcgagagaaaagttgaagtatttattgagagtaaagttg 32690829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 244 - 319
Target Start/End: Original strand, 4011658 - 4011733
Alignment:
Q  244 ttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagtt 319  Q
    |||| ||||| |||||||| ||||||||||||||| ||| ||||||||||||||||||||  |||||| |||||||    
T  4011658 tttttctaaaatgcccttattttataagaaaaagataaaattaaagttgcattgaaaattgtgtgagaaaaaagtt 4011733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 217 - 270
Target Start/End: Complemental strand, 17674382 - 17674329
Alignment:
Q  217 aaatgaaataatcattaaacataaaacttttactaaactgcccttactttataa 270  Q
    |||||||||||||||||||||||| | ||||| |||||||||||||||||||||    
T  17674382 aaatgaaataatcattaaacataacatttttattaaactgcccttactttataa 17674329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 272 - 345
Target Start/End: Complemental strand, 28640209 - 28640136
Alignment:
Q  272 aaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagttatagtatttattaagggtaaagttgg 345  Q
    ||||||||||||||||||||| ||||||||||    ||||||||||||  |||||||||| |||||||||||||    
T  28640209 aaaaagacaaacttaaagttgtattgaaaattgttcgagagaaaagttgaagtatttattgagggtaaagttgg 28640136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 237 - 344
Target Start/End: Complemental strand, 27810509 - 27810401
Alignment:
Q  237 ataaaacttttactaaactgcccttactttataag-aaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagttatagtatttattaagg 335  Q
    |||| ||||||||||||||||| ||  |||||| | ||||||| ||| ||||||||| ||||||||||  |||||| |||||||  |||||||||| |||    
T  27810509 ataacacttttactaaactgccattgttttatatgaaaaaagataaatttaaagttgtattgaaaattgtgtgagaaaaaagtttgagtatttattgagg 27810410  T
Q  336 gtaaagttg 344  Q
     ||||||||    
T  27810409 ataaagttg 27810401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 260 - 343
Target Start/End: Original strand, 32963022 - 32963106
Alignment:
Q  260 ttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtg--agagaaaagttatagtatttattaagggtaaagtt 343  Q
    ||||||||||||||||||||||||||||| |||||||| |||||   ||  | |||||||||| |||||||||| |||||||||||    
T  32963022 ttactttataagaaaaagacaaacttaaa-ttgcattggaaattgtttgaaaaagaaaagttagagtatttattgagggtaaagtt 32963106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 244 - 303
Target Start/End: Original strand, 36296130 - 36296189
Alignment:
Q  244 ttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaatt 303  Q
    |||||||||| |  ||||| |||||| ||| |||||||||||||||||||||||||||||    
T  36296130 ttttactaaaataaccttaatttataggaacaagacaaacttaaagttgcattgaaaatt 36296189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 48 - 139
Target Start/End: Original strand, 41940920 - 41941011
Alignment:
Q  48 catttcatttgagcccgaaaaaattgcctagagaagtctctaacacaacacgcaaaagatataatatggttacggtcatggaacgcggcatc 139  Q
    |||||| ||||||| |||| ||||| || |  | ||||| |||||| |||| |||||||| ||| || ||||||||||||||||||||||||    
T  41940920 catttcgtttgagctcgaataaatttcccacgggagtctttaacactacacacaaaagatgtaagatagttacggtcatggaacgcggcatc 41941011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 470 - 520
Target Start/End: Complemental strand, 29930769 - 29930719
Alignment:
Q  470 gattttggaaaaagctattcctaatagcttttcattttagagtcaaaatag 520  Q
    |||||||  |||||||| |||||||||||||||||||||| ||||||||||    
T  29930769 gattttgagaaaagctaatcctaatagcttttcattttagggtcaaaatag 29930719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 470 - 520
Target Start/End: Original strand, 32125503 - 32125553
Alignment:
Q  470 gattttggaaaaagctattcctaatagcttttcattttagagtcaaaatag 520  Q
    |||||||| |||||||| |||||| |||||||||||||||||| |||||||    
T  32125503 gattttgggaaaagctaatcctaacagcttttcattttagagtgaaaatag 32125553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 217 - 278
Target Start/End: Original strand, 8755590 - 8755651
Alignment:
Q  217 aaatgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaaga 278  Q
    ||||||||||||||| | |||||| ||||||| ||||||| ||||  |||||||||||||||    
T  8755590 aaatgaaataatcatcagacataacacttttattaaactgtcctttttttataagaaaaaga 8755651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 303
Target Start/End: Complemental strand, 41567015 - 41566880
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgc 257  Q
    |||||||||||||||||||| |   | |||||| | |||||||||||   ||| |||| |||| ||||||| ||||||||||| | |||||||||||||     
T  41567015 tactccatccgtttcaaaatgaaggtggttttagctaattgcacacaagttaatgaatgaaataaaataattattaaacataata-ttttactaaactgt 41566917  T
Q  258 ccttactttataagaaaaagacaaacttaaagttgcattgaaaatt 303  Q
    |          ||||||| |||||||||||||||||||||||||||    
T  41566916 ca---------aagaaaatgacaaacttaaagttgcattgaaaatt 41566880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 226
Target Start/End: Original strand, 42661852 - 42661920
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaata 226  Q
    |||||||| ||||||||||| ||| ||| |||| ||||||||||||| | |||||||| |||| |||||    
T  42661852 tactccattcgtttcaaaatgagtgtcgctttagccaattgcacacatattaaggaatgaaataaaata 42661920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 2729698 - 2729760
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaat 220  Q
    |||||||||||||||||||| | | ||| |||| ||||||||| ||||| |||||||| ||||    
T  2729698 tactccatccgtttcaaaatgattgtcgctttagccaattgcatacagattaaggaatgaaat 2729760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 478 - 520
Target Start/End: Complemental strand, 19131361 - 19131319
Alignment:
Q  478 aaaaagctattcctaatagcttttcattttagagtcaaaatag 520  Q
    |||||| || |||||||||||||||||||||| ||||||||||    
T  19131361 aaaaagttaatcctaatagcttttcattttagggtcaaaatag 19131319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 470 - 520
Target Start/End: Complemental strand, 19459702 - 19459652
Alignment:
Q  470 gattttggaaaaagctattcctaatagcttttcattttagagtcaaaatag 520  Q
    |||||||  |||||||| ||||||||||||||||||||||  |||||||||    
T  19459702 gattttgagaaaagctaatcctaatagcttttcattttaggatcaaaatag 19459652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 470 - 520
Target Start/End: Complemental strand, 32201600 - 32201550
Alignment:
Q  470 gattttggaaaaagctattcctaatagcttttcattttagagtcaaaatag 520  Q
    |||||| |||||||||| | ||||||||||||||||| ||||| |||||||    
T  32201600 gattttcgaaaaagctaatactaatagcttttcatttaagagtaaaaatag 32201550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 468 - 520
Target Start/End: Original strand, 16159330 - 16159380
Alignment:
Q  468 tggattttggaaaaagctattcctaatagcttttcattttagagtcaaaatag 520  Q
    |||||||||| |||||||| | |||||||||||  ||||||||||||||||||    
T  16159330 tggattttgggaaaagctaattctaatagcttt--attttagagtcaaaatag 16159380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 215
Target Start/End: Original strand, 42103975 - 42104032
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaat 215  Q
    |||||| ||||||||||||| ||| ||| |||| ||||||||||||| | ||||||||    
T  42103975 tactccctccgtttcaaaatgagtgtcgctttagccaattgcacacatattaaggaat 42104032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 105; Significance: 5e-52; HSPs: 55)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 163 - 319
Target Start/End: Complemental strand, 34225985 - 34225829
Alignment:
Q  163 catccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgccctta 262  Q
    ||||||||||||||| ||| ||| |||| ||||||||||| ||| |||||||| ||||||||||||||||| |||||| | |||||||||| ||||||||    
T  34225985 catccgtttcaaaatgagtgtcgctttagccaattgcacatagattaaggaatgaaatgaaataatcattagacataataattttactaaattgccctta 34225886  T
Q  263 ctttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagtt 319  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  34225885 ctttataagaaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtt 34225829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 158 - 348
Target Start/End: Complemental strand, 7743641 - 7743451
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgc 257  Q
    |||| ||||||||||||||| ||| ||| |||| |||||| |||||||| ||| |||| ||||||||||||||| | | |||| |||||||||||  |||    
T  7743641 tactacatccgtttcaaaatgagtgtcgctttagccaatttcacacagattaaagaattaaatgaaataatcatcagatataacacttttactaagttgc 7743542  T
Q  258 ccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagttatagtatttattaagggtaaagttggaag 348  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||  | |||||||| ||||||||||||||||    
T  7743541 ccttactttataagaaaaagacaaatttaaagttgcattgaaaattgtgtgagagaaaagttggactatttattgagggtaaagttggaag 7743451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 158 - 345
Target Start/End: Complemental strand, 24775429 - 24775242
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgc 257  Q
    |||||||||||||| || || ||| ||||||||  |||||||||||| | ||||| ||  |||||||||||||||| | |||| |||||||||||| |||    
T  24775429 tactccatccgttttaagatgagtgtcgttttagtcaattgcacacaaattaaggtattgaatgaaataatcattagatataacacttttactaaaatgc 24775330  T
Q  258 ccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagttatagtatttattaagggtaaagttgg 345  Q
     |||||||||||||||||| ||||||||||||||  ||||||||||  ||||||||||||||  |||||||||| |||||||| ||||    
T  24775329 tcttactttataagaaaaaaacaaacttaaagttatattgaaaattgtgtgagagaaaagttgaagtatttattgagggtaaacttgg 24775242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 165 - 319
Target Start/End: Original strand, 14378167 - 14378321
Alignment:
Q  165 tccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttact 264  Q
    ||||||| ||||| ||| ||| |||| | ||||||||||||  ||| ||||| ||||||||||||||| || |||| |||||||||||||||||||||||    
T  14378167 tccgttttaaaatgagtgtcgctttagctaattgcacacagtttaatgaatagaatgaaataatcatttaatataacacttttactaaactgcccttact 14378266  T
Q  265 ttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagtt 319  Q
    |||||||||||||| ||| ||||||||||||||||||||  | ||||||||||||    
T  14378267 ttataagaaaaagataaatttaaagttgcattgaaaattatgcgagagaaaagtt 14378321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 158 - 319
Target Start/End: Original strand, 40987194 - 40987353
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgc 257  Q
    |||||| ||||||| ||||| ||| ||| |||| |  |||||||||| | |||||||| ||||||||||||||||| |||||| |||||||||||| ||     
T  40987194 tactccctccgttttaaaatgagtgtcgctttagctcattgcacacatattaaggaatgaaatgaaataatcattagacataacacttttactaaattgt 40987293  T
Q  258 ccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagtt 319  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||  ||||||||||||||    
T  40987294 ccttactttataagaaaaagataaatttaaagttgcattgaaaatt--gtgagagaaaagtt 40987353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 193 - 344
Target Start/End: Original strand, 36360322 - 36360471
Alignment:
Q  193 caattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaacttaaagttg 292  Q
    ||||||||| || | ||| |||| ||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  36360322 caattgcacgcaaattaaagaatgaaatgaaataatcattagacataacacttttactaaactgcccttattttataagaaaaagataaacttaaagttg 36360421  T
Q  293 cattgaaaattccgtgagagaaaagttatagtatttattaagggtaaagttg 344  Q
     ||||||||||  ||| ||||||||||  ||||| |||| ||||||||||||    
T  36360422 tattgaaaatt--gtgtgagaaaagtttgagtatatattgagggtaaagttg 36360471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 218 - 348
Target Start/End: Complemental strand, 37107044 - 37106912
Alignment:
Q  218 aatgaaataatcattaaacataaaacttttactaaactgcccttactttataag--aaaaagacaaacttaaagttgcattgaaaattccgtgagagaaa 315  Q
    ||||||||||| |||  ||| || |||||||||||| |||||||||||||||||  ||||||| ||||||||||||||||||||||||  ||||||||||    
T  37107044 aatgaaataattatttgacacaacacttttactaaattgcccttactttataagcaaaaaagaaaaacttaaagttgcattgaaaattgtgtgagagaaa 37106945  T
Q  316 agttatagtatttattaagggtaaagttggaag 348  Q
    ||||  |||||||||||||||||||||||||||    
T  37106944 agttggagtatttattaagggtaaagttggaag 37106912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 183 - 319
Target Start/End: Original strand, 29795136 - 29795272
Alignment:
Q  183 tcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaa 282  Q
    ||||||||  ||||||||| |||| ||| ||||  |||||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||||||     
T  29795136 tcgttttagtcaattgcacgcagattaatgaatggaatgaaataatcattagacataatacttttactaaactgcccttattttataagaaaaagacaac 29795235  T
Q  283 cttaaagttgcattgaaaattccgtgagagaaaagtt 319  Q
     ||||||||||||||||||||  |||| |||||||||    
T  29795236 tttaaagttgcattgaaaattgtgtgaaagaaaagtt 29795272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 88610 - 88472
Alignment:
Q  1 gtaaggctgctgcctccccctccaaaactgtcatattaacccgctgccatttcatttgagcccgaaaaaattgccta-gagaagtctctaacacaacacg 99  Q
    |||||||| ||||||||||||||||||||||||||||  |||  |||||||||||||||||||||| ||||||||   |||| ||||||||||||||| |    
T  88610 gtaaggctactgcctccccctccaaaactgtcatatttgcccattgccatttcatttgagcccgaataaattgcccgcgaga-gtctctaacacaacatg 88512  T
Q  100 caaaagatataatatggttacggtcatggaacgcggcatc 139  Q
    |||||| | ||||||||||||||||||||||||| |||||    
T  88511 caaaagttgtaatatggttacggtcatggaacgcagcatc 88472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 208 - 343
Target Start/End: Original strand, 1298742 - 1298877
Alignment:
Q  208 taaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgt 307  Q
    |||| |||||||||||||||||||| || ||||   |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||  ||    
T  1298742 taagaaataaaatgaaataatcattgaatataacgtttttactaaattgcccttactttataagaaaaagacaaaattaaagttgcattgaaaattatgt 1298841  T
Q  308 gagagaaaagttatagtatttattaagggtaaagtt 343  Q
    ||||||||||||  || ||||||| ||| |||||||    
T  1298842 gagagaaaagttggagaatttattgaggataaagtt 1298877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 218 - 348
Target Start/End: Original strand, 4840699 - 4840829
Alignment:
Q  218 aatgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaag 317  Q
    |||||||||||||||  | ||||   ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |  ||| ||||||||    
T  4840699 aatgaaataatcattggatataacgtttttactaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaaaactgtgtgggagaaaag 4840798  T
Q  318 ttatagtatttattaagggtaaagttggaag 348  Q
    ||  |||||||||| ||||||||||||||||    
T  4840799 tttgagtatttattgagggtaaagttggaag 4840829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 158 - 348
Target Start/End: Original strand, 43388569 - 43388759
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgc 257  Q
    |||||| ||||||||||||| ||| ||| |||| ||||||||||||||| |||| |||  ||| || || |||     ||||| | |||||||||| |      
T  43388569 tactccctccgtttcaaaatgagtgtcgctttagccaattgcacacagattaagaaattgaataaagtagtcaaatgtcataacaattttactaaaataa 43388668  T
Q  258 ccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagttatagtatttattaagggtaaagttggaag 348  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||  ||||||||||||||  |||||||||| ||||||||||||||||    
T  43388669 ccttactttataagaaaaatacaaacttaaagttgtattgaaaattatgtgagagaaaagtttgagtatttattgagggtaaagttggaag 43388759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 217 - 348
Target Start/End: Original strand, 43344194 - 43344325
Alignment:
Q  217 aaatgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaa 316  Q
    ||||||||||||||||| |||||| | ||||| |||||  |||||||||||||||||||||| ||  ||||||||| ||||||||||  |||||||||||    
T  43344194 aaatgaaataatcattagacataacaattttattaaaccacccttactttataagaaaaagataagtttaaagttgtattgaaaattatgtgagagaaaa 43344293  T
Q  317 gttatagtatttattaagggtaaagttggaag 348  Q
     ||| |||||||||||| ||||||||||||||    
T  43344294 attagagtatttattaaaggtaaagttggaag 43344325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 242 - 348
Target Start/End: Complemental strand, 43460929 - 43460823
Alignment:
Q  242 acttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagttatagtatttattaagggtaaag 341  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||||| ||||||||||  ||||||||||||||  |||||||||| ||||||| |    
T  43460929 acttttactaaactgcccttactttataaggaaaagacaaaattaaagttgtattgaaaattatgtgagagaaaagttgaagtatttattgagggtaacg 43460830  T
Q  342 ttggaag 348  Q
    |||||||    
T  43460829 ttggaag 43460823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 221 - 319
Target Start/End: Complemental strand, 1381916 - 1381820
Alignment:
Q  221 gaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagtt 319  Q
    ||||||||||||| |||||| |||||||||||||||| |||||||||||||||||||| ||||||||| ||||||||||||||  ||||||||||||||    
T  1381916 gaaataatcattagacataacacttttactaaactgctcttactttataagaaaaagaaaaacttaaaattgcattgaaaatt--gtgagagaaaagtt 1381820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 12130774 - 12130912
Alignment:
Q  1 gtaaggctgctgcctccccctccaaaactgtcatattaacccgctgccatttcatttgagcccgaaaaaattgcctagagaagtctctaacacaacacgc 100  Q
    |||||||| |||||||||||||||| ||| |||||||  | ||||| |||||| |||||||||||| || |||||    | ||||||||||||||||| |    
T  12130774 gtaaggctactgcctccccctccaacactatcatatttgctcgctgtcatttcgtttgagcccgaataatttgcccgcgggagtctctaacacaacaccc 12130873  T
Q  101 aaaagatataatatggttacggtcatggaacgcggcatc 139  Q
    |||||||| ||||||||||||||||||||||| ||||||    
T  12130874 aaaagatagaatatggttacggtcatggaacggggcatc 12130912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 158 - 319
Target Start/End: Complemental strand, 42970129 - 42969969
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgc 257  Q
    |||||| ||||||| ||||||||| |||||||| ||||||||||| | | ||||||||  ||||||||||| |||| || ||| ||||||||| ||||||    
T  42970129 tactccttccgttttaaaataagtgtcgttttagccaattgcacatatattaaggaatgcaatgaaataattattagacgtaacacttttact-aactgc 42970031  T
Q  258 ccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagtt 319  Q
     |||| ||||||| |||| || || |||||||||||||||||||||  |||||| |||||||    
T  42970030 tcttattttataaaaaaatgataaccttaaagttgcattgaaaattgtgtgagaaaaaagtt 42969969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 34696040 - 34696176
Alignment:
Q  1 gtaaggctgctgcctccccctccaaaactgtcatattaacccgctgccatttcatttgagcccgaaaaaattgcctagagaagtctctaacacaacacgc 100  Q
    |||||||| ||||||||||||||||||||||||||||  |||||||||||  |  ||||||||||| |||||||| |  | |||||||||| ||||||||    
T  34696040 gtaaggctactgcctccccctccaaaactgtcatatttgcccgctgccat--cgattgagcccgaataaattgcccacgggagtctctaacgcaacacgc 34696137  T
Q  101 aaaagatataatatggttacggtcatggaacgcggcatc 139  Q
    ||||||| ||||||| ||| |||||||||| | ||||||    
T  34696138 aaaagatgtaatatgcttatggtcatggaatgtggcatc 34696176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 34718452 - 34718588
Alignment:
Q  1 gtaaggctgctgcctccccctccaaaactgtcatattaacccgctgccatttcatttgagcccgaaaaaattgcctagagaagtctctaacacaacacgc 100  Q
    |||||||| ||||||||||||||||||||||||||||  |||||||||||  |  ||||||||||| |||||||| |  | |||||||||| ||||||||    
T  34718452 gtaaggctactgcctccccctccaaaactgtcatatttgcccgctgccat--cgattgagcccgaataaattgcccacgggagtctctaacgcaacacgc 34718549  T
Q  101 aaaagatataatatggttacggtcatggaacgcggcatc 139  Q
    ||||||| ||||||| ||| |||||||||| | ||||||    
T  34718550 aaaagatgtaatatgcttatggtcatggaatgtggcatc 34718588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 199 - 319
Target Start/End: Complemental strand, 40410642 - 40410522
Alignment:
Q  199 cacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattga 298  Q
    |||||||| |||| |||  ||||| |||||||||  | ||||  |||||| ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  40410642 cacacagattaagaaatggaatgacataatcattggatataacgcttttattaaactgcccttactttataagaaaaagacaaaattaaagttgcattga 40410543  T
Q  299 aaattccgtgagagaaaagtt 319  Q
    |||||  || |||||||||||    
T  40410542 aaattgtgtcagagaaaagtt 40410522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 217 - 319
Target Start/End: Original strand, 4766183 - 4766285
Alignment:
Q  217 aaatgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaa 316  Q
    ||||||||||||||||  | ||||   | ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||    
T  4766183 aaatgaaataatcattggatataacgttattactaaactgcctttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagagaaaa 4766282  T
Q  317 gtt 319  Q
    |||    
T  4766283 gtt 4766285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 158 - 345
Target Start/End: Complemental strand, 4536802 - 4536627
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgc 257  Q
    |||||| ||| |||||||||  || ||  |||| ||||||||||| | | |||||||| ||||||||||||||||| |||||  ||||||||||||||||    
T  4536802 tactccctccatttcaaaatgtgtgtctgtttagccaattgcacataaattaaggaatgaaatgaaataatcattagacatatcacttttactaaactgc 4536703  T
Q  258 ccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagttatagtatttattaagggtaaagttgg 345  Q
    ||         |||||||||||||| ||||||||||||||||||||  |||||   ||||||| ||||||| || |||||||||||||    
T  4536702 cc---------aagaaaaagacaaatttaaagttgcattgaaaattgtgtgag---aaagttagagtatttgttgagggtaaagttgg 4536627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 187 - 348
Target Start/End: Original strand, 775825 - 775988
Alignment:
Q  187 tttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaactta 286  Q
    |||| ||||||||| ||||| ||||||||| ||| || || |||     ||||| | |||||||||| |  ||||| |||||||||||||||||||||||    
T  775825 tttagccaattgcatacagattaaggaatagaataaagtagtcaaatgtcataacaattttactaaaataaccttaatttataagaaaaagacaaactta 775924  T
Q  287 aagttgcattgaaaattccgt--gagagaaaagttatagtatttattaagggtaaagttggaag 348  Q
    |||||||||||||||||  ||  ||| ||||||||| |||||||||| ||||||||||| ||||    
T  775925 aagttgcattgaaaattgtgtgggagggaaaagttagagtatttattgagggtaaagttagaag 775988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 244 - 348
Target Start/End: Complemental strand, 16316863 - 16316759
Alignment:
Q  244 ttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagttatagtatttattaagggtaaagtt 343  Q
    |||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||||||  |||||| |||||||  | |||||||| |  ||||| ||    
T  16316863 ttttactaaattgcccttactgtataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagataaaagttggaatatttattgaaagtaaattt 16316764  T
Q  344 ggaag 348  Q
    |||||    
T  16316763 ggaag 16316759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 155 - 348
Target Start/End: Complemental strand, 25332815 - 25332620
Alignment:
Q  155 tgttactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaac 254  Q
    ||||||||| ||||||| ||||| ||| ||| |||| | ||||||||||||| ||||||||  ||| || || |||     ||||  | ||||||||||     
T  25332815 tgttactccctccgttttaaaatgagtgtcgctttagctaattgcacacagattaaggaattgaataaagtagtcaaatgtcatagcaattttactaaaa 25332716  T
Q  255 tgcccttactttataagaaaaagacaaacttaaagttgcattgaaaat--tccgtgagagaaaagttatagtatttattaagggtaaagttggaag 348  Q
    |  ||||||||||||||||||||||||||||| ||||| |||||||||  |  | ||||||||||||  |||||||||| ||| ||||||||||||    
T  25332715 taaccttactttataagaaaaagacaaacttagagttgtattgaaaattgtatgagagagaaaagttggagtatttattgaggataaagttggaag 25332620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 244 - 348
Target Start/End: Complemental strand, 41984575 - 41984468
Alignment:
Q  244 ttttactaaactgcccttactttataagaaaaagacaaa-cttaaagttgcattgaaaattccgtg--agagaaaagttatagtatttattaagggtaaa 340  Q
    |||||||||| |  |||||||||||||||| |||||||| |||||||||||||||||||||  |||  |||||||||||  |||||||||||| ||||||    
T  41984575 ttttactaaaataaccttactttataagaataagacaaaacttaaagttgcattgaaaattgtgtgtgagagaaaagttggagtatttattaaaggtaaa 41984476  T
Q  341 gttggaag 348  Q
    ||||||||    
T  41984475 gttggaag 41984468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 148 - 348
Target Start/End: Original strand, 10580758 - 10580960
Alignment:
Q  148 taatatgtgttactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaactttt 247  Q
    |||||| | |||||| || ||||||||||| |||||||||| | |||||||||||| ||  |||||||  ||| ||||| |||   | |||   | ||||    
T  10580758 taatatatattactcaattcgtttcaaaatgagtatcgtttaagccaattgcacacggatcaaggaatggaataaaatagtcaaatatcatcgcaatttt 10580857  T
Q  248 actaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgt--gagagaaaagttatagtatttattaagggtaaagttgg 345  Q
    | |||| |   ||||||||||||||| ||||||| |||||||||| ||||||||||  ||  ||||||||||||  |||||||||| |||||||||||||    
T  10580858 attaaaataatcttactttataagaacaagacaatcttaaagttgtattgaaaattgtgtgagagagaaaagtttgagtatttattgagggtaaagttgg 10580957  T
Q  346 aag 348  Q
    |||    
T  10580958 aag 10580960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 18345623 - 18345753
Alignment:
Q  1 gtaaggctgctgcctccccctccaaaactgtcatattaacccgctgccatttcatttgagcccgaaaaaattgcctagagaagtctctaacacaacacgc 100  Q
    |||||||| ||||||||||||| ||||||||||||||   ||| | ||||||| ||||||  | || ||||| || |  |||||||||||||||||||||    
T  18345623 gtaaggctactgcctccccctc-aaaactgtcatatttgtccgttaccatttcgtttgagttcaaataaattacccacggaagtctctaacacaacacgc 18345721  T
Q  101 aaaagatataatatggttacggtcatggaacg 132  Q
    ||||||  ||||||||||||| ||||||||||    
T  18345722 aaaagaagtaatatggttacgctcatggaacg 18345753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 258 - 348
Target Start/End: Complemental strand, 2459915 - 2459823
Alignment:
Q  258 ccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgt--gagagaaaagttatagtatttattaagggtaaagttggaag 348  Q
    ||||| |||||||||| | |||||||||||||||||||||||||||  ||  ||||||||||||  |||||||||| ||||||||||||||||    
T  2459915 ccttattttataagaataggacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgagggtaaagttggaag 2459823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 44017454 - 44017570
Alignment:
Q  1 gtaaggctgctgcctccccctccaaaactgtcatattaacccgctgccatttcatttgagcccgaaaaaattgcctagagaagtctctaacacaacacgc 100  Q
    |||||| || || ||||||||||||||||||||||||  | || || ||||| ||||||||||||| |||||||| |  | |||||||||||||||||||    
T  44017454 gtaaggttgttgtctccccctccaaaactgtcatatttgcacggtgtcattttatttgagcccgaataaattgcccacgggagtctctaacacaacacgc 44017553  T
Q  101 aaaagatataatatggt 117  Q
     |||||| ||| |||||    
T  44017554 gaaagatgtaagatggt 44017570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 269 - 345
Target Start/End: Complemental strand, 1360306 - 1360230
Alignment:
Q  269 aagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagttatagtatttattaagggtaaagttgg 345  Q
    |||||||||||||||||||||||||||||||||||   | |||||||||||  |||||||||| |||||||| ||||    
T  1360306 aagaaaaagacaaacttaaagttgcattgaaaattgtttaagagaaaagttgaagtatttattgagggtaaaattgg 1360230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 157 - 313
Target Start/End: Complemental strand, 14698231 - 14698075
Alignment:
Q  157 ttactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactg 256  Q
    ||||||| | ||||||||||| ||| ||| |||| ||||||||||||||| |||| |||  ||| || || |||     ||||  | |||||||||| |     
T  14698231 ttactcccttcgtttcaaaatgagtgtcgctttagccaattgcacacagattaagaaattgaataaagtagtcaaatgtcatagcaattttactaaaata 14698132  T
Q  257 cccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagaga 313  Q
     ||||||||||||||||||| ||||||||||||||| ||||||||||  ||||||||    
T  14698131 accttactttataagaaaaatacaaacttaaagttgtattgaaaattgtgtgagaga 14698075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 244 - 348
Target Start/End: Original strand, 39866669 - 39866775
Alignment:
Q  244 ttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaag--ttatagtatttattaagggtaaag 341  Q
    |||||||||| |  |||||||||| ||||||| |||||||||||||||| ||||||||||  |||||||||||   ||  |||||||||| | |||||||    
T  39866669 ttttactaaaataaccttactttacaagaaaatgacaaacttaaagttgtattgaaaattgtgtgagagaaaaaaatttgagtatttattgaaggtaaag 39866768  T
Q  342 ttggaag 348  Q
    |||||||    
T  39866769 ttggaag 39866775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 258 - 348
Target Start/End: Complemental strand, 33093510 - 33093418
Alignment:
Q  258 ccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtga--gagaaaagttatagtatttattaagggtaaagttggaag 348  Q
    ||||||||||||| |  |||| ||||||||||||||||||||||||  ||||  ||||||||||  | |||||||| ||||||||||||||||    
T  33093510 ccttactttataacatcaagataaacttaaagttgcattgaaaattgtgtgagggagaaaagttggaatatttattgagggtaaagttggaag 33093418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 222 - 347
Target Start/End: Complemental strand, 11171919 - 11171792
Alignment:
Q  222 aaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaat--tccgtgagagaaaagtt 319  Q
    ||||||||| || |||||| |||||||||||| |  ||| |||||||  ||||||||||||||||||||| ||||| ||||  |  |  |||||||| ||    
T  11171919 aaataatcaatagacataacacttttactaaattatcctaactttatgcgaaaaagacaaacttaaagttacattggaaatagtgagaaagagaaaaatt 11171820  T
Q  320 atagtatttattaagggtaaagttggaa 347  Q
      |||||||||||| |||||||||||||    
T  11171819 gaagtatttattaatggtaaagttggaa 11171792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 107
Target Start/End: Complemental strand, 26198742 - 26198638
Alignment:
Q  3 aaggctgctgcctccccctccaaaactgtcatattaacccgctgccatttcatttgagcccgaaaaaattgcctagagaagtctctaacacaacacgcaa 102  Q
    |||||| |||| |||||||||||||||||||||||    |||| |||||| |||||||| |||| |||||||| | |  ||||||||||||| ||| |||    
T  26198742 aaggctactgcatccccctccaaaactgtcatatttgttcgctaccattttatttgagctcgaataaattgcccacatgagtctctaacacagcacacaa 26198643  T
Q  103 aagat 107  Q
    |||||    
T  26198642 aagat 26198638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 220
Target Start/End: Original strand, 29396584 - 29396654
Alignment:
Q  150 atatgtgttactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaat 220  Q
    |||| ||||||||| || |||||||||| ||| |||||||| ||||||||||||||| |||||||| ||||    
T  29396584 atatctgttactccctctgtttcaaaatgagtgtcgttttagccaattgcacacagattaaggaatgaaat 29396654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 4566119 - 4566188
Alignment:
Q  244 ttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagaga 313  Q
    |||||||||| |  ||||| ||||||||||||||| ||| ||||||||||||||||||||  ||||||||    
T  4566119 ttttactaaaataaccttattttataagaaaaagataaatttaaagttgcattgaaaattgtgtgagaga 4566188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 470 - 519
Target Start/End: Original strand, 11476268 - 11476317
Alignment:
Q  470 gattttggaaaaagctattcctaatagcttttcattttagagtcaaaata 519  Q
    |||||||  |||||||| ||||||||||||||||||||||||||||||||    
T  11476268 gattttgagaaaagctaatcctaatagcttttcattttagagtcaaaata 11476317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 253
Target Start/End: Complemental strand, 6592189 - 6592101
Alignment:
Q  165 tccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaa 253  Q
    ||||||| ||||| ||  |||||||| ||||||  ||||  | |||||||| ||||||||||||||||| |||||| ||||||||||||    
T  6592189 tccgttttaaaatgagagtcgttttaaccaattagacacgaattaaggaatgaaatgaaataatcattagacataacacttttactaaa 6592101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 214
Target Start/End: Complemental strand, 38809939 - 38809883
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaa 214  Q
    |||||| ||| ||||||||| |||||||||||| ||||||||||||||| |||||||    
T  38809939 tactccctccatttcaaaatgagtatcgttttagccaattgcacacagattaaggaa 38809883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 269 - 343
Target Start/End: Complemental strand, 14511589 - 14511515
Alignment:
Q  269 aagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagttatagtatttattaagggtaaagtt 343  Q
    |||||||||||||| |||||||| |||||||||||  |  | |||||||||| |||||||||| ||| |||||||    
T  14511589 aagaaaaagacaaatttaaagttacattgaaaattgtgcaaaagaaaagttagagtatttattgaggataaagtt 14511515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 215
Target Start/End: Original strand, 441143 - 441200
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaat 215  Q
    |||||| ||||||||||||| ||| |||||||| ||||||||||||| | ||||||||    
T  441143 tactccctccgtttcaaaatgagtgtcgttttagccaattgcacacaaattaaggaat 441200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 220
Target Start/End: Original strand, 32227930 - 32227985
Alignment:
Q  165 tccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaat 220  Q
    |||||||||||||||| |||| |||| ||||||||||||| | |||||||| ||||    
T  32227930 tccgtttcaaaataagcatcgctttagccaattgcacacaaattaaggaatgaaat 32227985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 410 - 445
Target Start/End: Original strand, 43388820 - 43388855
Alignment:
Q  410 ggctaaaatgacattcattttgaaacggagggagta 445  Q
    ||||||||||||| ||||||||||||||||||||||    
T  43388820 ggctaaaatgacactcattttgaaacggagggagta 43388855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 9709980 - 9709910
Alignment:
Q  1 gtaaggctgctgcctccccctccaaaactgtcatattaacccgctgccatttcatttgagcccgaaaaaat 71  Q
    |||||||  ||||||||||||||||||||||||||||    || ||||||||| |||||||| ||| ||||    
T  9709980 gtaaggcaactgcctccccctccaaaactgtcatatttgttcgttgccatttcgtttgagcctgaataaat 9709910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 29809054 - 29808992
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaat 220  Q
    ||||||||| |||||||||| ||| ||| |||| ||||||||||||| | |||||||| ||||    
T  29809054 tactccatctgtttcaaaatgagtgtcgctttagccaattgcacacaaattaaggaatgaaat 29808992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 470 - 520
Target Start/End: Complemental strand, 43973465 - 43973415
Alignment:
Q  470 gattttggaaaaagctattcctaatagcttttcattttagagtcaaaatag 520  Q
    |||||||  |||||||| |||||||||||| ||||||||| ||||||||||    
T  43973465 gattttgagaaaagctaatcctaatagcttctcattttagggtcaaaatag 43973415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 215
Target Start/End: Complemental strand, 4133263 - 4133206
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaat 215  Q
    |||||| ||||||||||||| ||| ||| |||| ||||||||||||| | ||||||||    
T  4133263 tactccctccgtttcaaaatgagtgtcgctttagccaattgcacacatattaaggaat 4133206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 479 - 520
Target Start/End: Complemental strand, 6128201 - 6128160
Alignment:
Q  479 aaaagctattcctaatagcttttcattttagagtcaaaatag 520  Q
    |||||||| ||||||||||||||||||||| | |||||||||    
T  6128201 aaaagctagtcctaatagcttttcattttaaaatcaaaatag 6128160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 226
Target Start/End: Original strand, 8789341 - 8789410
Alignment:
Q  157 ttactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaata 226  Q
    ||||||||||||||| ||||| ||| | ||||||  |||||||||||| | |||||||| |||| |||||    
T  8789341 ttactccatccgtttaaaaatgagtgttgttttagacaattgcacacatattaaggaatgaaataaaata 8789410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 470 - 519
Target Start/End: Original strand, 40896186 - 40896235
Alignment:
Q  470 gattttggaaaaagctattcctaatagcttttcattttagagtcaaaata 519  Q
    |||||||  |||||||| ||||||||||||||||||||||  ||||||||    
T  40896186 gattttgagaaaagctaatcctaatagcttttcattttaggatcaaaata 40896235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 470 - 519
Target Start/End: Original strand, 42714256 - 42714305
Alignment:
Q  470 gattttggaaaaagctattcctaatagcttttcattttagagtcaaaata 519  Q
    |||||||  |||||||| ||||||||| |||| |||||||||||||||||    
T  42714256 gattttgagaaaagctaatcctaatagttttttattttagagtcaaaata 42714305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 226
Target Start/End: Original strand, 45081817 - 45081886
Alignment:
Q  157 ttactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaata 226  Q
    ||||||||||||||| ||||| ||| ||||||||   ||||||||||| | |||||||| |||| |||||    
T  45081817 ttactccatccgttttaaaatgagtgtcgttttagaaaattgcacacatattaaggaatgaaataaaata 45081886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 252 - 316
Target Start/End: Original strand, 45147982 - 45148047
Alignment:
Q  252 aactgcccttactttataagaaaaag-acaaacttaaagttgcattgaaaattccgtgagagaaaa 316  Q
    |||||| |||||||||||| |||||  |||| |||||||||||||| ||||||  |||||||||||    
T  45147982 aactgctcttactttataaaaaaaaatacaatcttaaagttgcattaaaaattgtgtgagagaaaa 45148047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 103; Significance: 8e-51; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 158 - 348
Target Start/End: Original strand, 42259461 - 42259651
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgc 257  Q
    |||||| ||||||||||||| ||| ||| | || |||||||||||| || ||| |||| |||||| ||||| |||| |||||| |||||||||||| |||    
T  42259461 tactccttccgtttcaaaatgagtgtcgctctagccaattgcacacggattaaagaatgaaatgagataattattagacataacacttttactaaaatgc 42259560  T
Q  258 ccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagttatagtatttattaagggtaaagttggaag 348  Q
    |||||||||||||||||||||||| |||||||||||||||||||||  |||||| |||||||  |||||||||| ||||||||||||||||    
T  42259561 ccttactttataagaaaaagacaagcttaaagttgcattgaaaattatgtgagacaaaagtttgagtatttattgagggtaaagttggaag 42259651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 218 - 348
Target Start/End: Original strand, 3680895 - 3681025
Alignment:
Q  218 aatgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaag 317  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||||    
T  3680895 aatgaaataatcattagacataaaacttttactaaactgctcttactttataagaaaaagacaaatttaaagttgcatttaaaattctgtgagagaaaag 3680994  T
Q  318 ttatagtatttattaagggtaaagttggaag 348  Q
    |||  ||||||||||| ||||||||||||||    
T  3680995 ttagtgtatttattaatggtaaagttggaag 3681025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 163 - 319
Target Start/End: Original strand, 33056201 - 33056358
Alignment:
Q  163 catccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgccctta 262  Q
    ||||||||||||||| ||| ||||||||  |||||||||| ||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  33056201 catccgtttcaaaatgagtgtcgttttagtcaattgcacatagattaaggaatgaaatgaaataatcattaaacataacacttttactaaactgccctta 33056300  T
Q  263 cttta-taagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagtt 319  Q
    ||||| ||||||||||||||| |||||  |||||||||||||  ||||||||||||||    
T  33056301 ctttattaagaaaaagacaaatttaaaactgcattgaaaattgtgtgagagaaaagtt 33056358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 159 - 349
Target Start/End: Complemental strand, 17869477 - 17869287
Alignment:
Q  159 actccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgcc 258  Q
    ||||| || |||||||||| | | | ||||||  |||||||||||||| |||||||| ||||||||||||||||| |||||| ||||||| |||| || |    
T  17869477 actccctctgtttcaaaatgaatgttgttttagtcaattgcacacagattaaggaatgaaatgaaataatcattagacataacacttttattaaattgtc 17869378  T
Q  259 cttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagttatagtatttattaagggtaaagttggaagg 349  Q
     ||||||||||||||||| ||||||||||||||||||||||||||  |||||||||||| |  |||||||||| ||| |||||||||||||    
T  17869377 tttactttataagaaaaatacaaacttaaagttgcattgaaaattgtgtgagagaaaagattgagtatttattgaggataaagttggaagg 17869287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 158 - 345
Target Start/End: Complemental strand, 40299079 - 40298901
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgc 257  Q
    |||||| ||||||||||||| ||| |||||||| ||||||||||||| | |||||||| |||||||||||| |||  |||||| ||||||||||||||||    
T  40299079 tactccctccgtttcaaaatgagtgtcgttttagccaattgcacacaaattaaggaatgaaatgaaataataattggacataacacttttactaaactgc 40298980  T
Q  258 ccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagttatagtatttattaagggtaaagttgg 345  Q
    ||         ||||||||||||||||||||||| |||||||||||  ||||||||||||||  |||||||||| |||||||||||||    
T  40298979 cc---------aagaaaaagacaaacttaaagttacattgaaaattgtgtgagagaaaagttggagtatttattgagggtaaagttgg 40298901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 158 - 348
Target Start/End: Original strand, 10684741 - 10684933
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgc 257  Q
    |||||||||||||||||||||||| ||||||||  ||||| |||| | | ||||||||||||| ||||| | |   | ||||| | |||||||||| |      
T  10684741 tactccatccgtttcaaaataagtgtcgttttaatcaattacacatatattaaggaataaaataaaatagttaaatatcataacaattttactaaaataa 10684840  T
Q  258 ccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgt--gagagaaaagttatagtatttattaagggtaaagttggaag 348  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||  ||  |||||||||||| || |||||||||||||||||||||||||    
T  10684841 ccttactttataagaaaaagacaaacttaaagttgaattgaaaattgtgtgagagagaaaagttttaatatttattaagggtaaagttggaag 10684933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 200 - 348
Target Start/End: Complemental strand, 34733508 - 34733362
Alignment:
Q  200 acacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaa 299  Q
    ||||| |||||| ||| ||||||||||||||||| |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  34733508 acacaaaataagaaatgaaatgaaataatcattagacataacacttttactaaactacccttactttataagaaaaagacaaacttaaagttgcattgaa 34733409  T
Q  300 aattccgtgagagaaaagttatagtatttattaagggtaaagttggaag 348  Q
    ||||  ||||||||||| ||  |||||||||| | || | |||||||||    
T  34733408 aatt--gtgagagaaaaattggagtatttattgaagggagagttggaag 34733362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 169 - 319
Target Start/End: Complemental strand, 42121772 - 42121622
Alignment:
Q  169 tttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttactttat 268  Q
    ||||||||| ||| ||| |||| ||||||||||||||| |||||||| |||| |||||||||||| |||||  ||||||||||||||| |||||||||||    
T  42121772 tttcaaaatgagtgtcgctttagccaattgcacacagattaaggaatgaaatcaaataatcattagacatatcacttttactaaactgaccttactttat 42121673  T
Q  269 aagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagtt 319  Q
     ||||||||| | ||||||||||||||||||||||   |||||||||||||    
T  42121672 tagaaaaagatacacttaaagttgcattgaaaattgtttgagagaaaagtt 42121622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 158 - 331
Target Start/End: Original strand, 48838592 - 48838770
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgc 257  Q
    |||| ||| ||||| ||||||||| | |||||| ||||||||||||| | |||||||||||||||||||||||||| |||||| | || ||||||||||     
T  48838592 tacttcattcgttttaaaataagtgttgttttaaccaattgcacacaaattaaggaataaaatgaaataatcattagacataacatttatactaaactga 48838691  T
Q  258 ccttactttata-----agaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagttatagtatttatt 331  Q
    ||||||||||||     | ||||||||||| ||||||||||||||||||||  ||||||||||||||  ||||||||||    
T  48838692 ccttactttataaaaataaaaaaagacaaatttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatttatt 48838770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 199 - 348
Target Start/End: Original strand, 34002085 - 34002235
Alignment:
Q  199 cacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgccctt-actttataagaaaaagacaaacttaaagttgcattg 297  Q
    |||||||| |||| ||| ||||||||||||||||  | |||| || ||| ||||||||| ||| ||||||||||||||||||||| ||||||||||||||    
T  34002085 cacacagattaagaaatgaaatgaaataatcattggatataacacctttgctaaactgcactttactttataagaaaaagacaaaattaaagttgcattg 34002184  T
Q  298 aaaattccgtgagagaaaagttatagtatttattaagggtaaagttggaag 348  Q
    ||||||  ||||||||||||||  |||||||||| ||||||||||||||||    
T  34002185 aaaattgtgtgagagaaaagttggagtatttattgagggtaaagttggaag 34002235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 199 - 348
Target Start/End: Original strand, 41905888 - 41906036
Alignment:
Q  199 cacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattga 298  Q
    |||||||| |||| ||| || |||||||||||||  | ||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  41905888 cacacagattaagaaatgaactgaaataatcattggatataacgcttttactaaactgcccttactttataagaaaaagacaaaattaaagttgcattga 41905987  T
Q  299 aaattccgtgagagaaaagttatagtatttattaagggtaaagttggaag 348  Q
    |||||  || |||||||||||  |||||||||| | ||||||||||||||    
T  41905988 aaattgtgtaagagaaaagttggagtatttattga-ggtaaagttggaag 41906036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 208 - 319
Target Start/End: Original strand, 22627316 - 22627427
Alignment:
Q  208 taaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgt 307  Q
    |||||||| ||||||||||||| |||||||||| || |||||||||||||| ||||||||||| || |||||||||||||||||||||||||||||  ||    
T  22627316 taaggaatgaaatgaaataatcgttaaacataacacatttactaaactgcctttactttataaaaataagacaaacttaaagttgcattgaaaattgtgt 22627415  T
Q  308 gagagaaaagtt 319  Q
    ||||||||||||    
T  22627416 gagagaaaagtt 22627427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 202 - 348
Target Start/End: Complemental strand, 1103681 - 1103535
Alignment:
Q  202 acagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaa 301  Q
    ||||| |||| ||||||||||||||||||  | ||| || | |||||||||||| |||||||||||||| ||||| ||||| |||||||| |||||||||    
T  1103681 acagattaagaaataaaatgaaataatcaccagacaaaacatttttactaaactacccttactttataaaaaaaaaacaaatttaaagttacattgaaaa 1103582  T
Q  302 ttccgtgagagaaaagttatagtatttattaagggtaaagttggaag 348  Q
    ||  ||||||||||||||  |||||||||| ||||||||||||||||    
T  1103581 ttgtgtgagagaaaagttgaagtatttattgagggtaaagttggaag 1103535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 165 - 303
Target Start/End: Complemental strand, 32275429 - 32275291
Alignment:
Q  165 tccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttact 264  Q
    ||||||| ||||| ||  |||||||| ||||||||||||| | |||| ||| |||||||||||||||||||||| |   ||||||||||||||| |||||    
T  32275429 tccgttttaaaatgagcgtcgttttaaccaattgcacacatattaagaaatgaaatgaaataatcattaaacatgacgtttttactaaactgcctttact 32275330  T
Q  265 ttataagaaaaagacaaacttaaagttgcattgaaaatt 303  Q
    ||||||||||||  |||||||||||||||||||||||||    
T  32275329 ttataagaaaaaatcaaacttaaagttgcattgaaaatt 32275291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 9328738 - 9328875
Alignment:
Q  1 gtaaggctgctgcctccccctccaaaactgtcatattaacccgctgccatttcatttgagcccgaaaaaattgcctagagaagtctctaacacaacacgc 100  Q
    |||||||| ||||||||||||||||||| ||||||||  |||| ||||||||| ||||||| |||| |||||| |  | ||| |||||||||||||||||    
T  9328738 gtaaggctactgcctccccctccaaaacagtcatattttcccgttgccatttcgtttgagctcgaataaattgtcccgggaa-tctctaacacaacacgc 9328836  T
Q  101 aaaagatataatatggttacggtcatggaacgcggcatc 139  Q
    ||| ||| ||| |||||||||||||||||||||||||||    
T  9328837 aaatgatgtaagatggttacggtcatggaacgcggcatc 9328875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 16731984 - 16731846
Alignment:
Q  1 gtaaggctgctgcctccccctccaaaactgtcatattaacccgctgccatttcatttgagcccgaaaaaattgcctagagaagtctctaacacaacacgc 100  Q
    |||||||| |||||||||||||||| |||||||||||  ||| |||||||||| |||||||||||| ||||||||    | | |||||||||||||| ||    
T  16731984 gtaaggctactgcctccccctccaatactgtcatatttgccctctgccatttcgtttgagcccgaataaattgcccgcgggaatctctaacacaacatgc 16731885  T
Q  101 aaaagatataatatggttacggtcatggaacgcggcatc 139  Q
    ||||||| |||||||||| |||||||||||| |||||||    
T  16731884 aaaagatgtaatatggttgcggtcatggaacacggcatc 16731846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 17710118 - 17709980
Alignment:
Q  1 gtaaggctgctgcctccccctccaaaactgtcatattaacccgctgccatttcatttgagcccgaaaaaattgcctagagaagtctctaacacaacacgc 100  Q
    |||||||| |||||||||||||||| |||||||||||  ||| |||||||||| |||||||||||| ||||||||    | | |||||||||||||| ||    
T  17710118 gtaaggctactgcctccccctccaatactgtcatatttgccctctgccatttcgtttgagcccgaataaattgcccgcgggaatctctaacacaacatgc 17710019  T
Q  101 aaaagatataatatggttacggtcatggaacgcggcatc 139  Q
    ||||||| |||||||||| |||||||||||| |||||||    
T  17710018 aaaagatgtaatatggttgcggtcatggaacacggcatc 17709980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 198 - 319
Target Start/End: Complemental strand, 18886846 - 18886725
Alignment:
Q  198 gcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattg 297  Q
    ||||||||| |||| |||  |||||||||||||||| | ||||  ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  18886846 gcacacagactaagaaatggaatgaaataatcattagatataacgcttttactaaactgcccttactttataaggaaaagacaaaattaaagttgcattg 18886747  T
Q  298 aaaattccgtgagagaaaagtt 319  Q
    ||||||  |||| |||||||||    
T  18886746 aaaattgtgtgaaagaaaagtt 18886725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 192 - 331
Target Start/End: Complemental strand, 47272358 - 47272219
Alignment:
Q  192 ccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaacttaaagtt 291  Q
    ||||||||||||||| ||| |||| ||||| ||||| |||||||||||| | ||||||||||||||||||  |||||| ||||||||||||| |||| ||    
T  47272358 ccaattgcacacagattaaagaatgaaatggaataaccattaaacataacaattttactaaactgcccttgttttatatgaaaaagacaaacataaaatt 47272259  T
Q  292 gcattgaaaattccgtgagagaaaagttatagtatttatt 331  Q
    ||||||||||||  |||||  |||||||  ||||||||||    
T  47272258 gcattgaaaattgtgtgaggaaaaagttgaagtatttatt 47272219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 158 - 348
Target Start/End: Original strand, 32345746 - 32345938
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgc 257  Q
    |||||| ||||||||||||| ||| ||| |||| ||||||||||||||| |||| |||  ||| || || |||     ||||| | |||||||||| |      
T  32345746 tactccctccgtttcaaaatgagtgtcgctttagccaattgcacacagattaagaaattgaataaagtagtcaaatgtcataacaattttactaaaataa 32345845  T
Q  258 ccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgt--gagagaaaagttatagtatttattaagggtaaagttggaag 348  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||  ||  ||||||||||||  |||||||||| ||||||||||||||||    
T  32345846 ccttactttataagaaaaatacaaacttaaagttgtattgaaaattgtgtgagagagaaaagttggagtatttattgagggtaaagttggaag 32345938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 208 - 316
Target Start/End: Original strand, 28044103 - 28044211
Alignment:
Q  208 taaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgt 307  Q
    |||| ||||||||||||||||||||  | ||||   ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||  ||    
T  28044103 taagaaataaaatgaaataatcattggatataacgtttttactaaactgcccttactttataagaaaaagacaaaattaaagttgtattgaaaattgtgt 28044202  T
Q  308 gagagaaaa 316  Q
    |||||||||    
T  28044203 gagagaaaa 28044211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 158 - 303
Target Start/End: Original strand, 40207299 - 40207447
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaa----acttttactaaa 253  Q
    |||||||||||||||||||| ||| | | |||| ||||||||||||| | ||||| ||  |||||| ||||||||| | ||| |    ||||||||||||    
T  40207299 tactccatccgtttcaaaatgagtgttgctttagccaattgcacacatattaaggtattgaatgaa-taatcattagatatatataacacttttactaaa 40207397  T
Q  254 ctgcccttactttataagaaaaagacaaacttaaagttgcattgaaaatt 303  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  40207398 ctgcccttactttataagaaaatgacaaacttaaaattgcattgaaaatt 40207447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 157 - 343
Target Start/End: Complemental strand, 5723228 - 5723058
Alignment:
Q  157 ttactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactg 256  Q
    ||||||||||||||| ||||| ||| ||||||||  |||||||||||| | |||||||||||||     |||||||| |||| |  ||||||||||||||    
T  5723228 ttactccatccgttttaaaatgagtgtcgttttagtcaattgcacacaaattaaggaataaaat-----aatcattagacatca--cttttactaaactg 5723136  T
Q  257 cccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagttatagtatttattaagggtaaagtt 343  Q
    |||         ||| |||||||||||||||||||||||||||||||  ||||||||||||||  |||||||||| |||||||||||    
T  5723135 ccc---------aaggaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtttgagtatttattgagggtaaagtt 5723058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 16098541 - 16098410
Alignment:
Q  1 gtaaggctgctgcctccccctccaaaactgtcatattaacccgctgccatttcatttgagcccgaaaaaattgcctagagaagtctctaacacaacacgc 100  Q
    |||||||| || |||| |||||||||| |||||||||    || | ||||||| |||||||||||| ||||||||||  | |||||||||||||||||||    
T  16098541 gtaaggctactacctctccctccaaaattgtcatatttgttcgtttccatttcgtttgagcccgaataaattgcctatgggagtctctaacacaacacgc 16098442  T
Q  101 aaaagatataatatggttacggtcatggaacg 132  Q
    ||||||  ||||||||||||||||||||||||    
T  16098441 aaaagaagtaatatggttacggtcatggaacg 16098410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 224 - 319
Target Start/End: Original strand, 42010553 - 42010648
Alignment:
Q  224 ataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagtt 319  Q
    |||||||||| |||||| | ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||   |||||||||||||    
T  42010553 ataatcattagacataatatttttactaaactgcccttattttataagaaaaagacaaacttaaagttacattgaaaattgtatgagagaaaagtt 42010648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 158 - 348
Target Start/End: Complemental strand, 19906655 - 19906465
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgc 257  Q
    |||||| ||||||||||||| ||| ||| |||| |||||||||||  || ||||||||  ||| ||||| |||     ||||  | |||||||||| |      
T  19906655 tactccctccgtttcaaaatgagtgtcgctttagccaattgcacatggattaaggaatggaataaaatagtcaaatgtcatagcaattttactaaaataa 19906556  T
Q  258 ccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagttatagtatttattaagggtaaagttggaag 348  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||  | ||||||||||||  | |||||||| ||||||||||||||||    
T  19906555 ccttactttataggaacaagacaaacttaaagttgcattgaaaattgtgagagagaaaagttggaatatttattgagggtaaagttggaag 19906465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 158 - 348
Target Start/End: Complemental strand, 26963722 - 26963530
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgc 257  Q
    |||||||||||||||||||| ||| | | |||| ||| || |||||| | |||| |||  ||| ||||| |||     ||||| | |||||||||| |      
T  26963722 tactccatccgtttcaaaatgagtgttgctttaaccatttacacacaaattaagaaatggaataaaatagtcaaatgtcataacaattttactaaaataa 26963623  T
Q  258 ccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgt--gagagaaaagttatagtatttattaagggtaaagttggaag 348  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||  ||||||||||||  |||||| ||| ||||||||||||||||    
T  26963622 ccttactttataagaaaaagacaaacttaaagttgcattgaaaattatgtgagagagaaaagttggagtattcattgagggtaaagttggaag 26963530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 158 - 344
Target Start/End: Original strand, 19920195 - 19920370
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgc 257  Q
    |||||||| | ||| | ||||||| || |||||  |||||||| ||| | |||||||| ||||||||||||||||| |||| | |||||||||||| ||     
T  19920195 tactccattcattttagaataagtgtcattttagtcaattgcatacaaattaaggaatgaaatgaaataatcattagacatgacacttttactaaagtgt 19920294  T
Q  258 ccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagttatagtatttattaagggtaaagttg 344  Q
    ||         |||||||||||||  ||||||||||||||||||||  | ||||||||||||  |||||||||| ||||||||||||    
T  19920295 cc---------aagaaaaagacaa--ttaaagttgcattgaaaattgtgcgagagaaaagtttgagtatttattgagggtaaagttg 19920370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 13 - 139
Target Start/End: Complemental strand, 22289280 - 22289154
Alignment:
Q  13 cctccccctccaaaactgtcatattaacccgctgccatttcatttgagcccgaaaaaattgcctagagaagtctctaacacaacacgcaaaagatataat 112  Q
    |||||||||||||||||||||||||  | || ||||||||| | |||| |||||  ||||||| |  | | ||||||||||||||||| |||||| ||||    
T  22289280 cctccccctccaaaactgtcatatttgctcgttgccatttcgtctgagtccgaatgaattgcccacgggaatctctaacacaacacgcgaaagatgtaat 22289181  T
Q  113 atggttacggtcatggaacgcggcatc 139  Q
    ||| | ||||||||| |||||||||||    
T  22289180 atgttgacggtcatgaaacgcggcatc 22289154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 218 - 348
Target Start/End: Original strand, 26527370 - 26527499
Alignment:
Q  218 aatgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaag 317  Q
    |||| ||||||||||| |||||| || |||||||||||||  ||||||||||||||||| | ||| ||||||||||||||||||||   | | |||||||    
T  26527370 aatgcaataatcattagacataacacctttactaaactgcttttactttataagaaaaa-aaaaatttaaagttgcattgaaaattatttaacagaaaag 26527468  T
Q  318 ttatagtatttattaagggtaaagttggaag 348  Q
    ||  |||||||||| ||| ||||||| ||||    
T  26527469 ttggagtatttattgaggttaaagttagaag 26527499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 158 - 344
Target Start/End: Original strand, 30833007 - 30833192
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgc 257  Q
    |||||| ||||||||||||| ||| ||| ||||  ||||| |  ||||| | | ||||| ||||||||||| |||| | |||| |||||||||||| ||     
T  30833007 tactccttccgtttcaaaatgagtgtcgctttagtcaatttcgaacagatttaagaatagaatgaaataattattagatataacacttttactaaattgt 30833106  T
Q  258 ccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagttatagtatttattaagggtaaagttg 344  Q
    | ||  |||||| |||||||||||||||| |||| || ||||||||  |||||| |||||||  |||||||||| | ||||||||||    
T  30833107 c-ttgttttatatgaaaaagacaaacttagagttacactgaaaattgtgtgagaaaaaagttggagtatttattgaaggtaaagttg 30833192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 244 - 348
Target Start/End: Original strand, 39117486 - 39117591
Alignment:
Q  244 ttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagaga-aaagttatagtatttattaagggtaaagt 342  Q
    |||||||||| |  |||||||||||||||| |||||||||||||||||||||||||||||  |||||||| ||| ||  |||||| ||| ||||||| ||    
T  39117486 ttttactaaaataaccttactttataagaataagacaaacttaaagttgcattgaaaattgtgtgagagagaaaattggagtattcattgagggtaatgt 39117585  T
Q  343 tggaag 348  Q
    ||||||    
T  39117586 tggaag 39117591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 158 - 313
Target Start/End: Complemental strand, 6522060 - 6521905
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgc 257  Q
    |||||| ||||||| ||||| ||| ||| |||| ||||||||||||| | |||||||| |||| || || |||     ||||| | || ||||||| |      
T  6522060 tactccctccgttttaaaatgagtgtcgctttagccaattgcacacaaattaaggaatgaaataaagtagtcaaatgtcataacaattatactaaaataa 6521961  T
Q  258 ccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagaga 313  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||  ||||||||    
T  6521960 ccttactttataagaaaaagacaaacttaaaattgtattgaaaattgtgtgagaga 6521905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 218 - 345
Target Start/End: Original strand, 33845391 - 33845509
Alignment:
Q  218 aatgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaag 317  Q
    |||||||||||||||| |  ||| ||||||||||||||||||         |||||||||||||||||||||||||||||||||||  | |||| |||||    
T  33845391 aatgaaataatcattacatgtaacacttttactaaactgccc---------aagaaaaagacaaacttaaagttgcattgaaaattgtgcgagaaaaaag 33845481  T
Q  318 ttatagtatttattaagggtaaagttgg 345  Q
    ||  |||| ||||| |||||||||||||    
T  33845482 ttggagtaattattgagggtaaagttgg 33845509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 259 - 348
Target Start/End: Original strand, 31416763 - 31416854
Alignment:
Q  259 cttactttataagaaaaagacaaacttaaagttgcattgaaaattccgt--gagagaaaagttatagtatttattaagggtaaagttggaag 348  Q
    |||| |||||||||| |||||||| ||||||||||||||||||||  ||  ||||||||| ||  |||||||||| ||||||||||||||||    
T  31416763 cttattttataagaacaagacaaatttaaagttgcattgaaaattgtgtgagagagaaaaattgaagtatttattgagggtaaagttggaag 31416854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 243 - 319
Target Start/End: Original strand, 36447608 - 36447684
Alignment:
Q  243 cttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagtt 319  Q
    |||||| ||||||| | ||||||||||||||||||| ||| ||||||||| ||||||||||  ||||||||||||||    
T  36447608 cttttattaaactgtctttactttataagaaaaagataaaattaaagttgaattgaaaattatgtgagagaaaagtt 36447684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 116
Target Start/End: Original strand, 29201098 - 29201208
Alignment:
Q  8 tgctgcctccccctccaaaactgtcatattaacccgctgccatttcatttgagcccgaaaaaattgcctagaga--agtctctaacacaacacgcaaaag 105  Q
    |||| |||||||||||||||||||||||||   |||||| |||||| |||||||||||| ||| || | | | |  ||||||||| |||||| |||||||    
T  29201098 tgctacctccccctccaaaactgtcatatttgtccgctgtcatttcgtttgagcccgaataaactggccacacatgagtctctaatacaacatgcaaaag 29201197  T
Q  106 atataatatgg 116  Q
    |||||||||||    
T  29201198 atataatatgg 29201208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 260 - 348
Target Start/End: Original strand, 36447083 - 36447173
Alignment:
Q  260 ttactttataagaaaaagacaaacttaaagttgcattgaaaattccgt--gagagaaaagttatagtatttattaagggtaaagttggaag 348  Q
    |||||||||||||| ||||||| |||||||||||||||||||||  ||  ||||||||||||  |||||||| | ||| ||||||||||||    
T  36447083 ttactttataagaataagacaagcttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttaatgaggataaagttggaag 36447173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 82 - 139
Target Start/End: Complemental strand, 1581585 - 1581528
Alignment:
Q  82 agtctctaacacaacacgcaaaagatataatatggttacggtcatggaacgcggcatc 139  Q
    |||||||| ||||||||||||||||| ||||||||||| ||||||||||||| |||||    
T  1581585 agtctctagcacaacacgcaaaagatgtaatatggttatggtcatggaacgcagcatc 1581528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 157 - 248
Target Start/End: Complemental strand, 18733676 - 18733585
Alignment:
Q  157 ttactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaactttta 248  Q
    ||||||||| ||||||||||||||| ||||||||  |||||| ||||| | |||| | |  ||||||||||||||||| ||||| |||||||    
T  18733676 ttactccattcgtttcaaaataagtgtcgttttagtcaattgtacacaaattaagtagtggaatgaaataatcattaagcataacactttta 18733585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 30493746 - 30493883
Alignment:
Q  1 gtaaggctgctgcctccccctccaaaactgtcatattaacccgctgccatttcatttgagcccgaaaaaattgccta-gagaagtctctaacacaacacg 99  Q
    |||||||| |||||||||| ||||||||||||||| |   | ||||||||||| |||||||| ||  |||||||| | ||||| | ||||||||||||||    
T  30493746 gtaaggctactgcctcccc-tccaaaactgtcatacttgtctgctgccatttcgtttgagcctgagtaaattgcccatgagaatt-tctaacacaacacg 30493843  T
Q  100 caaaagatataatatggttacggtcatggaacgcggcatc 139  Q
    ||||| || |||  ||||||| ||||||||| ||| ||||    
T  30493844 caaaatatgtaagttggttacagtcatggaatgcgacatc 30493883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 17877459 - 17877321
Alignment:
Q  1 gtaaggctgctgcctccccctccaaaactgtcatattaacccgctgccatttcatttgagcccgaaaaaattgcctagagaagtctctaacacaacacgc 100  Q
    |||||||| || ||||||||||||| |||||||||||  |||||||| ||||| ||||||| ||||  || | || |  | ||||| |||| | ||||||    
T  17877459 gtaaggctacttcctccccctccaatactgtcatatttccccgctgcgatttcgtttgagcacgaatgaacttcccatgggagtctataacgccacacgc 17877360  T
Q  101 aaaagatataatatggttacggtcatggaacgcggcatc 139  Q
    || | || ||||||||||||  |||||||||||| ||||    
T  17877359 aacaaatgtaatatggttacaatcatggaacgcgacatc 17877321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 470 - 520
Target Start/End: Complemental strand, 41161333 - 41161283
Alignment:
Q  470 gattttggaaaaagctattcctaatagcttttcattttagagtcaaaatag 520  Q
    |||||||  |||||||| |||||||||||||||||||||||||||||||||    
T  41161333 gattttgagaaaagctaatcctaatagcttttcattttagagtcaaaatag 41161283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 258 - 303
Target Start/End: Original strand, 19277057 - 19277102
Alignment:
Q  258 ccttactttataagaaaaagacaaacttaaagttgcattgaaaatt 303  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||    
T  19277057 ccttactttatatgaacaagacaaacttaaagttgcattgaaaatt 19277102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 278 - 348
Target Start/End: Original strand, 42044010 - 42044082
Alignment:
Q  278 acaaacttaaagttgcattgaaaattccgtgaga--gaaaagttatagtatttattaagggtaaagttggaag 348  Q
    |||| |||||||||||||||||||||  ||||||  ||||||||  |||||||||| ||||||||||||||||    
T  42044010 acaatcttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgagggtaaagttggaag 42044082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 470 - 519
Target Start/End: Complemental strand, 44699285 - 44699236
Alignment:
Q  470 gattttggaaaaagctattcctaatagcttttcattttagagtcaaaata 519  Q
    ||||||||||||| ||| ||||| ||||||||||||||||||||||||||    
T  44699285 gattttggaaaaacctaatcctattagcttttcattttagagtcaaaata 44699236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 468 - 520
Target Start/End: Complemental strand, 39390715 - 39390663
Alignment:
Q  468 tggattttggaaaaagctattcctaatagcttttcattttagagtcaaaatag 520  Q
    |||||||||  ||||| || |||||||||||||||||||||||||||||||||    
T  39390715 tggattttgagaaaagttaatcctaatagcttttcattttagagtcaaaatag 39390663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 470 - 520
Target Start/End: Complemental strand, 38603926 - 38603876
Alignment:
Q  470 gattttggaaaaagctattcctaatagcttttcattttagagtcaaaatag 520  Q
    |||||||  |||||||| |||||||||||||||||||||| ||||||||||    
T  38603926 gattttgagaaaagctaatcctaatagcttttcattttagggtcaaaatag 38603876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 211
Target Start/End: Complemental strand, 40339700 - 40339646
Alignment:
Q  157 ttactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataag 211  Q
    ||||||||||||||| |||||| || |||||||| ||||||||||||||| ||||    
T  40339700 ttactccatccgttttaaaatatgtgtcgttttagccaattgcacacagattaag 40339646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 271 - 348
Target Start/End: Complemental strand, 18733583 - 18733506
Alignment:
Q  271 gaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagttatagtatttattaagggtaaagttggaag 348  Q
    |||||||||||| ||||||||||||||||| ||  |||||| |||| ||  |||||||||| |||||| |||| ||||    
T  18733583 gaaaaagacaaatttaaagttgcattgaaagttgtgtgagaaaaaaattggagtatttattgagggtagagttcgaag 18733506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 215
Target Start/End: Complemental strand, 22298242 - 22298185
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaat 215  Q
    |||||| || |||||||||| ||| |||||||| ||||||||||||||| ||||||||    
T  22298242 tactccctctgtttcaaaatgagtgtcgttttagccaattgcacacagattaaggaat 22298185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 215
Target Start/End: Complemental strand, 27936008 - 27935951
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaat 215  Q
    |||||||||||||||||||| ||| ||| |||| |||| |||||||||| ||||||||    
T  27936008 tactccatccgtttcaaaatgagtgtcgctttagccaactgcacacagattaaggaat 27935951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 258 - 348
Target Start/End: Complemental strand, 30515116 - 30515024
Alignment:
Q  258 ccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaa--gttatagtatttattaagggtaaagttggaag 348  Q
    ||||||||| |||||| |||||||| ||||||||| ||| ||||||   ||||||||||  |||  |||||||||| | ||||||||||||||    
T  30515116 ccttactttttaagaataagacaaatttaaagttgtatttaaaattgtctgagagaaaaaagttggagtatttattgaaggtaaagttggaag 30515024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 220
Target Start/End: Original strand, 7795151 - 7795215
Alignment:
Q  156 gttactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaat 220  Q
    |||||||||||||||||||||| ||| ||| |||| ||||||| ||||| | |||||||| ||||    
T  7795151 gttactccatccgtttcaaaatgagtgtcgctttagccaattgtacacaaattaaggaatgaaat 7795215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 476 - 515
Target Start/End: Original strand, 15314619 - 15314658
Alignment:
Q  476 ggaaaaagctattcctaatagcttttcattttagagtcaa 515  Q
    |||||||| || ||||||||||||||||||||||||||||    
T  15314619 ggaaaaagttaatcctaatagcttttcattttagagtcaa 15314658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 29530845 - 29530907
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaat 220  Q
    |||||| | ||||| ||||| ||| ||| |||| ||||||||||||||| |||||||||||||    
T  29530845 tactcccttcgttttaaaatgagtgtcgatttagccaattgcacacagattaaggaataaaat 29530907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 215
Target Start/End: Complemental strand, 1742232 - 1742175
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaat 215  Q
    |||||| ||||||||||||| ||| ||| |||| ||||||||||||| | ||||||||    
T  1742232 tactccctccgtttcaaaatgagtgtcgctttagccaattgcacacatattaaggaat 1742175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 215
Target Start/End: Original strand, 23155372 - 23155429
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaat 215  Q
    |||||||||||||| ||||| ||||||| |||| ||||||||| ||||| ||| ||||    
T  23155372 tactccatccgttttaaaatgagtatcgctttagccaattgcatacagattaaagaat 23155429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 125
Target Start/End: Original strand, 34578437 - 34578538
Alignment:
Q  24 aaaactgtcatattaacccgctgccatttcatttgagcccgaaaaaattgcctagagaagtctctaacacaacacgcaaaagatataatatggttacggt 123  Q
    ||||||||||||||  | || || |||||| | |||||||||| |||||||| |  | | | || ||||||||||||||||||| ||||||| | |||||    
T  34578437 aaaactgtcatatttgctcgttgtcatttcgtctgagcccgaataaattgcccacgggaatttcgaacacaacacgcaaaagatgtaatatgttaacggt 34578536  T
Q  124 ca 125  Q
    ||    
T  34578537 ca 34578538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 260 - 313
Target Start/End: Complemental strand, 36836199 - 36836146
Alignment:
Q  260 ttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagaga 313  Q
    ||||||||||  || |||||||| ||||||||||||||||||||  ||||||||    
T  36836199 ttactttatagaaacaagacaaatttaaagttgcattgaaaattatgtgagaga 36836146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 99; Significance: 2e-48; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 157 - 319
Target Start/End: Original strand, 11993 - 12154
Alignment:
Q  157 ttactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactg 256  Q
    ||||||| ||||||||||||| ||| ||| |||| | ||||||||| ||| ||||||||  |||||||||||||||| |||||| |||||||||||||||    
T  11993 ttactccctccgtttcaaaatgagtgtcgctttagcgaattgcacagagattaaggaatggaatgaaataatcattagacataacacttttactaaactg 12092  T
Q  257 cccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagtt 319  Q
     ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  12093 -ccttactttataagaaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtt 12154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 97; Significance: 3e-47; HSPs: 58)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 168 - 348
Target Start/End: Complemental strand, 22601365 - 22601185
Alignment:
Q  168 gtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttacttta 267  Q
    |||||||||| | | ||| |||| ||||||| ||||| | ||| |||||||||||||||||||||| ||||||  ||||||||||| || | ||||||||    
T  22601365 gtttcaaaatgaatgtcgatttagccaattgtacacatattaatgaataaaatgaaataatcattagacataactcttttactaaattgtctttacttta 22601266  T
Q  268 taagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagttatagtatttattaagggtaaagttggaag 348  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| |||  |||||||||  ||||||||||||||||    
T  22601265 taagaaaaagacaaacttaaagttgcattgaaaattctgtgagagaaaggttggagtatttatcgagggtaaagttggaag 22601185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 157 - 349
Target Start/End: Original strand, 32326636 - 32326828
Alignment:
Q  157 ttactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactg 256  Q
    ||||| ||||||||| ||||| ||| ||| ||||  |||||||||||||| |||||||| ||||||||||||||||| || ||| |||||||||||||||    
T  32326636 ttactacatccgttttaaaatgagtgtcgctttagtcaattgcacacagattaaggaatgaaatgaaataatcattagacgtaacacttttactaaactg 32326735  T
Q  257 cccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagttatagtatttattaagggtaaagttggaagg 349  Q
    |||||  |||||| |||||||||||| ||||||||||||||||||||  |||||| |||||||  ||||||||||  ||||||| ||| ||||    
T  32326736 cccttgttttatatgaaaaagacaaatttaaagttgcattgaaaattgtgtgagaaaaaagttggagtatttattgtgggtaaaattgaaagg 32326828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 158 - 348
Target Start/End: Complemental strand, 9022636 - 9022445
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgc 257  Q
    |||||| ||||||| ||||| ||| |||||||| ||||||||||||||| |||  |||  |||||| ||||||||| |||||| ||||||||||||||||    
T  9022636 tactccctccgttttaaaatgagtgtcgttttagccaattgcacacagattaaaaaatggaatgaattaatcattagacataacacttttactaaactgc 9022537  T
Q  258 ccttactttataagaaaaagacaaactt-aaagttgcattgaaaattccgtgagagaaaagttatagtatttattaagggtaaagttggaag 348  Q
     |||  |||||| ||||||||||||||| ||||||||||||||||||  |||||| |||||||  |||||||||| ||||||||||||||||    
T  9022536 acttgttttatatgaaaaagacaaacttaaaagttgcattgaaaattgtgtgagaaaaaagttggagtatttattgagggtaaagttggaag 9022445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 158 - 348
Target Start/End: Original strand, 27109732 - 27109923
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgc 257  Q
    |||||||||||||||||||| ||| ||||||||     | ||||||| | |||| |||| |||||||||||||||| | |||| |||||||||||| ||     
T  27109732 tactccatccgtttcaaaatgagtgtcgttttaggtgttggcacacatattaagaaatagaatgaaataatcattagatataacacttttactaaattgt 27109831  T
Q  258 cctt-actttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagttatagtatttattaagggtaaagttggaag 348  Q
    | || |||||||||||||| ||||||||||||||||||||| |||||  ||||||||||||||| |||||||||| ||||||||||||||||    
T  27109832 cttttactttataagaaaaggacaaacttaaagttgcattggaaattgtgtgagagaaaagttagagtatttattgagggtaaagttggaag 27109923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 198 - 348
Target Start/End: Complemental strand, 7612697 - 7612548
Alignment:
Q  198 gcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattg 297  Q
    ||||||||| |||| |||| |||||||||||||||  | ||||  | |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  7612697 gcacacagattaagaaatagaatgaaataatcattggatataacgc-tttactaaactgcccttactttataagaaaaagacaaaattaaagttgcattg 7612599  T
Q  298 aaaattccgtgagagaaaagttatagtatttattaagggtaaagttggaag 348  Q
    ||||||  ||||||||||||||  |||||||||| ||||||||||||||||    
T  7612598 aaaattgtgtgagagaaaagttggagtatttatttagggtaaagttggaag 7612548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 157 - 303
Target Start/End: Original strand, 38328966 - 38329111
Alignment:
Q  157 ttactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactg 256  Q
    ||||||| ||||||||||||| ||| ||| ||||  |||||||||||||| ||||||||  |||||||||||||||| |||||| |||||||||||||||    
T  38328966 ttactccctccgtttcaaaatgagtttcgctttagtcaattgcacacagattaaggaatggaatgaaataatcattagacataacacttttactaaactg 38329065  T
Q  257 cccttactttataagaaaaagacaaacttaaagttgcattgaaaatt 303  Q
     |||||||||||||  |||||||||||||||||||||||||||||||    
T  38329066 -ccttactttataatcaaaagacaaacttaaagttgcattgaaaatt 38329111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 158 - 348
Target Start/End: Complemental strand, 36915605 - 36915417
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgc 257  Q
    |||||| ||||||| ||||| ||| |||||||| ||||||||| ||||| ||||||||  |||||||||||||||| |||||| | |||||||||| |||    
T  36915605 tactccctccgttttaaaatgagtgtcgttttaaccaattgcatacagattaaggaatggaatgaaataatcattagacataatatttttactaaattgc 36915506  T
Q  258 ccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagttatagtatttattaagggtaaagttggaag 348  Q
    ||||  |||||| |||||||||||||||||||||||||||||||||  |||||| ||||  |  | |||||||| | ||||||||||||||    
T  36915505 ccttgttttatatgaaaaagacaaacttaaagttgcattgaaaatt--gtgagaaaaaatgttgaatatttattgaaggtaaagttggaag 36915417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 158 - 319
Target Start/End: Original strand, 41790052 - 41790214
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaat-aaggaataaaatgaaataatcattaaacataaaacttttactaaactg 256  Q
    |||||||||||||||||||||| | |||||||| ||||||||| | | ||| || |||||||||||||||||||||| |||||| ||||||| |||| ||    
T  41790052 tactccatccgtttcaaaataaatgtcgttttagccaattgcataaaaaattaatgaataaaatgaaataatcattagacataatacttttattaaattg 41790151  T
Q  257 cccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagtt 319  Q
     | || |||||||||||||||||||| ||||||||| ||||||||||  ||||||||||||||    
T  41790152 tctttgctttataagaaaaagacaaatttaaagttggattgaaaattgtgtgagagaaaagtt 41790214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 187 - 320
Target Start/End: Original strand, 45187237 - 45187368
Alignment:
Q  187 tttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaactta 286  Q
    |||| ||||||||||||||| ||||||||| |||||||||||||||| |||| | ||||||||||||||| ||||  |||||||||||||||||||||||    
T  45187237 tttagccaattgcacacagattaaggaatataatgaaataatcattagacatgacacttttactaaactgtccttgttttataagaaaaagacaaactta 45187336  T
Q  287 aagttgcattgaaaattccgtgagagaaaagtta 320  Q
    ||||||| |||||||||  |||||||||||||||    
T  45187337 aagttgctttgaaaatt--gtgagagaaaagtta 45187368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 215 - 348
Target Start/End: Complemental strand, 30789118 - 30788985
Alignment:
Q  215 taaaatgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaa 314  Q
    ||||||||||||||||||| |||||| ||||||| |||| || ||||||||||||||||||||||||| ||||||||| ||||||||||  |||||||||    
T  30789118 taaaatgaaataatcattagacataacacttttattaaattgtccttactttataagaaaaagacaaatttaaagttgtattgaaaattatgtgagagaa 30789019  T
Q  315 aagttatagtatttattaagggtaaagttggaag 348  Q
    |||||  |||||||| ||||||||||||| ||||    
T  30789018 aagttggagtatttactaagggtaaagttagaag 30788985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 152 - 319
Target Start/End: Complemental strand, 6839453 - 6839286
Alignment:
Q  152 atgtgttactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttacta 251  Q
    |||| ||||| | ||||||| ||||| ||| |||||||| || |||| ||||||| |||  |||  |||||||||||||||| |||||| ||||||||||    
T  6839453 atgttttacttcctccgtttaaaaatgagtgtcgttttaacccattgtacacagattaaaaaatggaatgaaataatcattagacataacacttttacta 6839354  T
Q  252 aactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagtt 319  Q
    || |||| |||||||||||||||||||||||| |||| ||||||||||||||  ||||||||||||||    
T  6839353 aattgcctttactttataagaaaaagacaaacataaaattgcattgaaaattatgtgagagaaaagtt 6839286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 158 - 319
Target Start/End: Complemental strand, 41415072 - 41414912
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgc 257  Q
    |||||||||||||| ||||||| | |||||||| ||||||||||| | | |||||||| ||||||||||||||||| || ||| ||||||||| ||||||    
T  41415072 tactccatccgttttaaaataaatgtcgttttagccaattgcacatatattaaggaatgaaatgaaataatcattagacgtaacacttttact-aactgc 41414974  T
Q  258 ccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagtt 319  Q
    ||||| ||||||| ||||  | || |||||||||||||||||||||  |||||| |||||||    
T  41414973 ccttattttataaaaaaataataagcttaaagttgcattgaaaattgtgtgagaaaaaagtt 41414912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 157 - 344
Target Start/End: Original strand, 8382398 - 8382576
Alignment:
Q  157 ttactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactg 256  Q
    ||||||||||||||| ||||| ||| |||||||| | ||||||||| | | ||| |||| |||| |||||||| ||| |||||| |||||||||||||||    
T  8382398 ttactccatccgttttaaaatgagtgtcgttttagctaattgcacataaattaaagaatgaaataaaataatcgttagacataacacttttactaaactg 8382497  T
Q  257 cccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagttatagtatttattaagggtaaagttg 344  Q
    |||         |||||||||||||||||| ||||||||||||||||  ||||||||||||||  ||||| |||| ||||||||||||    
T  8382498 ccc---------aagaaaaagacaaacttatagttgcattgaaaattgtgtgagagaaaagttggagtatatattgagggtaaagttg 8382576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 23853983 - 23853848
Alignment:
Q  1 gtaaggctgctgcctccccctccaaaactgtcatattaacccgctgccatttcatttgagcccgaaaaaattgcctagagaagtctctaacacaacacgc 100  Q
    |||||||| ||||||| ||||||||||||||||||||   |||||| |||||| ||||| |||||| |||||||| |  | ||||||||||| |||||||    
T  23853983 gtaaggctactgcctcaccctccaaaactgtcatatttttccgctgtcatttcgtttgaacccgaataaattgcccacgggagtctctaacataacacgc 23853884  T
Q  101 aaaagatataatatggttacggtcatggaacgcggc 136  Q
    ||||||| |||||| |||||||||||||||||||||    
T  23853883 aaaagatgtaatatagttacggtcatggaacgcggc 23853848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 244 - 348
Target Start/End: Original strand, 14541744 - 14541848
Alignment:
Q  244 ttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagttatagtatttattaagggtaaagtt 343  Q
    |||||||||| |  |||||||||||||||| |||||||||||||||||||||||||||||  | ||||||||||||  |||||||||||||| |||||||    
T  14541744 ttttactaaaataaccttactttataagaacaagacaaacttaaagttgcattgaaaattgtgagagagaaaagttgaagtatttattaaggataaagtt 14541843  T
Q  344 ggaag 348  Q
    |||||    
T  14541844 ggaag 14541848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 8451259 - 8451397
Alignment:
Q  1 gtaaggctgctgcctccccctccaaaactgtcatattaacccgctgccatttcatttgagcccgaaaaaattgcctagagaagtctctaacacaacacgc 100  Q
    |||| ||| |||||||||||||||| |||||||||||  |||||| || |||  |||||||||||| |||||| | | |  ||||||||||||||||  |    
T  8451259 gtaaagctactgcctccccctccaacactgtcatatttgcccgcttcctttttgtttgagcccgaataaattgtccacaagagtctctaacacaacatcc 8451358  T
Q  101 aaaagatataatatggttacggtcatggaacgcggcatc 139  Q
    ||||||| ||| |||||||||||||||||||||||||||    
T  8451359 aaaagatgtaaaatggttacggtcatggaacgcggcatc 8451397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 218 - 348
Target Start/End: Complemental strand, 11257719 - 11257590
Alignment:
Q  218 aatgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaag 317  Q
    ||||||||||| |||||| | || | |||||||||||| || ||| ||||||||||| ||||||||||||||||||||||||||||  ||||||||||||    
T  11257719 aatgaaataattattaaaaa-aacatttttactaaactacctttattttataagaaacagacaaacttaaagttgcattgaaaattgtgtgagagaaaag 11257621  T
Q  318 ttatagtatttattaagggtaaagttggaag 348  Q
    ||  |||||||||| ||  ||||||||||||    
T  11257620 ttgaagtatttattgagattaaagttggaag 11257590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 13415074 - 13414944
Alignment:
Q  1 gtaaggctgctgcctccccctccaaaactgtcatattaacccgctgccatttcatttgagcccgaaaaaattgcctagagaagtctctaacacaacacgc 100  Q
    |||||||| ||||||||||||||||||||||||||||   ||||||||||||| |||||||||||| ||||||||     |||||||||| | ||||| |    
T  13415074 gtaaggctactgcctccccctccaaaactgtcatatttgtccgctgccatttcgtttgagcccgaataaattgcccgcgaaagtctctaaaaaaacacac 13414975  T
Q  101 aaaagatataatatggttacggtcatggaac 131  Q
    ||||| | ||||||||||||| |||||||||    
T  13414974 aaaagttgtaatatggttacgttcatggaac 13414944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 157 - 348
Target Start/End: Original strand, 34461493 - 34461686
Alignment:
Q  157 ttactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactg 256  Q
    ||||||| | ||||||||||| ||| ||| |||| ||||||| ||||||| |||||||| |||| ||||| |||     ||||| | |||||||||| |     
T  34461493 ttactccttacgtttcaaaatgagtgtcgctttagccaattgtacacagattaaggaatgaaataaaatagtcaaatgtcataacaattttactaaaata 34461592  T
Q  257 cccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgag--agaaaagttatagtatttattaagggtaaagttggaag 348  Q
      ||||||||| | ||| |||||||||||||||||||||||||||||  |||||  |||||||||  ||| |||||| ||||||||||||||||    
T  34461593 atcttactttacatgaacaagacaaacttaaagttgcattgaaaattgtgtgagacagaaaagttggagtttttattgagggtaaagttggaag 34461686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 173 - 319
Target Start/End: Complemental strand, 39970541 - 39970404
Alignment:
Q  173 aaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttactttataaga 272  Q
    ||||| ||| |||||||| ||||||||||| | | ||| |||| ||||||||||||||||| |||||  ||||||||||||||||||         ||||    
T  39970541 aaaatgagtgtcgttttagccaattgcacataaattaaagaatgaaatgaaataatcattagacataccacttttactaaactgccc---------aaga 39970451  T
Q  273 aaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagtt 319  Q
    |||||||||||||||||||||||||||||||  | ||||||||||||    
T  39970450 aaaagacaaacttaaagttgcattgaaaattgtgcgagagaaaagtt 39970404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 208 - 348
Target Start/End: Original strand, 5588430 - 5588576
Alignment:
Q  208 taaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaacttaaag-------ttgcattgaaa 300  Q
    |||| |||| ||||||||||||||||||||||| | ||||||||||||| ||| | ||||||||||||||||||||||||||       || ||||||||    
T  5588430 taagaaatataatgaaataatcattaaacataacatttttactaaactg-cctcaatttataagaaaaagacaaacttaaagttacattttacattgaaa 5588528  T
Q  301 attccgtgagagaaaagttatagtatttattaagggtaaagttggaag 348  Q
     ||  ||||||||||||||  |||||||||| | ||||||||||||||    
T  5588529 tttgtgtgagagaaaagtttgagtatttattgaaggtaaagttggaag 5588576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 230 - 319
Target Start/End: Complemental strand, 16209109 - 16209020
Alignment:
Q  230 attaaacataaaacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagtt 319  Q
    ||||||||||| ||||||| ||| ||| ||||| |||||| |||||||||||||||||||||||||||||||||  ||||||||||||||    
T  16209109 attaaacataacacttttattaatctgtccttattttataggaaaaagacaaacttaaagttgcattgaaaattatgtgagagaaaagtt 16209020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 193 - 345
Target Start/End: Complemental strand, 32661501 - 32661358
Alignment:
Q  193 caattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaacttaaagttg 292  Q
    |||||||||||| | |||||||| |||| |||||||||||| |||||  |||| ||||||||||| |         | | ||||||||||||||||||||    
T  32661501 caattgcacacaaattaaggaatgaaataaaataatcattagacatatcacttctactaaactgcac---------acggaaaagacaaacttaaagttg 32661411  T
Q  293 cattgaaaattccgtgagagaaaagttatagtatttattaagggtaaagttgg 345  Q
     ||||||||||  ||||||||||||||| |||||||||| |||||||||||||    
T  32661410 tattgaaaattgtgtgagagaaaagttagagtatttattgagggtaaagttgg 32661358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 478192 - 478323
Alignment:
Q  1 gtaaggctgctgcctccccctccaaaactgtcatattaacccgctgccatttcatttgagcccgaaaaaattgcctagagaagtctctaacacaacacgc 100  Q
    |||||||| ||||||||||||||||||||||||||||  |||| ||||||||  |||||||||| | |||||| | |  ||| ||||||||||||||| |    
T  478192 gtaaggctactgcctccccctccaaaactgtcatatttgcccgttgccattttgtttgagcccggataaattgaccatggaaatctctaacacaacacac 478291  T
Q  101 aaaagatataatatggttacggtcatggaacg 132  Q
    ||||||| | | ||||||  ||||||||||||    
T  478292 aaaagatgttagatggttgtggtcatggaacg 478323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 158 - 319
Target Start/End: Original strand, 2803167 - 2803319
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgc 257  Q
    ||||| |||||||||||||||||| ||| |||| | ||||||||||| | |  ||||| ||||||||||||||||| |||||| ||||||| |||||||     
T  2803167 tactctatccgtttcaaaataagtgtcgctttaactaattgcacacaaattttggaatgaaatgaaataatcattatacataacacttttattaaactgt 2803266  T
Q  258 ccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagtt 319  Q
    |         ||||||||||||||||||||||||| ||||||||||  |  |||||||||||    
T  2803267 c---------taagaaaaagacaaacttaaagttgaattgaaaattgtgcaagagaaaagtt 2803319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 232 - 348
Target Start/End: Original strand, 5044213 - 5044329
Alignment:
Q  232 taaacataaaacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagttatagtatttatt 331  Q
    ||||||||| ||||||| |||||||| |||||||||||| ||||| ||||| ||||||||| ||| ||||||  |||| |||||||||  ||||||||||    
T  5044213 taaacataatacttttattaaactgctcttactttataaaaaaaatacaaatttaaagttgtattaaaaattgtgtgatagaaaagttgaagtatttatt 5044312  T
Q  332 aagggtaaagttggaag 348  Q
     ||  ||||||||||||    
T  5044313 gagaataaagttggaag 5044329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 158 - 313
Target Start/End: Complemental strand, 8471499 - 8471344
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgc 257  Q
    |||||| | ||||||||||| ||| ||| |||| ||||||||||| ||| |||| ||| |||| || || |||     ||||  | |||||||||| |      
T  8471499 tactcccttcgtttcaaaatgagtgtcgctttagccaattgcacatagattaagaaatgaaataaagtagtcaaatgtcataccaattttactaaaataa 8471400  T
Q  258 ccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagaga 313  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  8471399 ccttactttataagaaaaagacaaacttaaagttgcattgaaaattgtgtgagaga 8471344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 183 - 345
Target Start/End: Original strand, 3095450 - 3095603
Alignment:
Q  183 tcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaa 282  Q
    ||||||||  ||||| |||||| | |||  |||| |||||||||||||||||| || | |||||||||||||||||          ||| ||||||||||    
T  3095450 tcgttttagtcaattacacacaaattaaaaaatagaatgaaataatcattaaatatgacacttttactaaactgcca---------aaggaaaagacaaa 3095540  T
Q  283 cttaaagttgcattgaaaattccgtgagagaaaagttatagtatttattaagggtaaagttgg 345  Q
    ||||||||||||||||||| |  | ||||||||||||  |||||||||| |||||||||||||    
T  3095541 cttaaagttgcattgaaaagtgtgcgagagaaaagttgaagtatttattgagggtaaagttgg 3095603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 237 - 319
Target Start/End: Original strand, 18666536 - 18666618
Alignment:
Q  237 ataaaacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagtt 319  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||   |||||||||||| ||||||  ||||||||||||||    
T  18666536 ataacacttttactaaactgtccttactttataagaaaaagacaacactaaagttgcattaaaaattgtgtgagagaaaagtt 18666618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 218 - 319
Target Start/End: Complemental strand, 2067880 - 2067779
Alignment:
Q  218 aatgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaag 317  Q
    |||||||||||||||  | ||||  |||||| |||||||||||||||||||||| ||||||| || ||||||||||||| ||||||  ||||| ||||||    
T  2067880 aatgaaataatcatttgatataacgcttttattaaactgcccttactttataaggaaaagaccaaattaaagttgcattaaaaattgtgtgagtgaaaag 2067781  T
Q  318 tt 319  Q
    ||    
T  2067780 tt 2067779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 158 - 314
Target Start/End: Original strand, 34168124 - 34168280
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgc 257  Q
    |||||| ||||||||||||| ||| ||| |||| |||||| ||||| || ||||||||  ||| || || |||     ||||  | |||||||||| |      
T  34168124 tactccctccgtttcaaaatgagtgtcgctttagccaattacacacggattaaggaattgaataaagtagtcaaatgtcatagcaattttactaaaataa 34168223  T
Q  258 ccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaa 314  Q
    |||||||||||||||| |||||||||||||||||||||||||||||  |||||||||    
T  34168224 ccttactttataagaacaagacaaacttaaagttgcattgaaaattgtgtgagagaa 34168280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 224 - 319
Target Start/End: Complemental strand, 7129451 - 7129356
Alignment:
Q  224 ataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagtt 319  Q
    ||||||||| || ||||  ||||||||||||||   |||||||||||||| |||||||| |||||||||||||| |||||  ||||||||||||||    
T  7129451 ataatcattgaatataacgcttttactaaactgattttactttataagaataagacaaaattaaagttgcattggaaattgtgtgagagaaaagtt 7129356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 260 - 319
Target Start/End: Original strand, 11336047 - 11336106
Alignment:
Q  260 ttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagtt 319  Q
    ||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||    
T  11336047 ttactttataagaaaaagacaaaattaaagttgcattgaaaattgtgtgagagaaaagtt 11336106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 5 - 76
Target Start/End: Original strand, 40588870 - 40588941
Alignment:
Q  5 ggctgctgcctccccctccaaaactgtcatattaacccgctgccatttcatttgagcccgaaaaaattgcct 76  Q
    |||| |||||||||||||||||||||| |||||  |||||||||||||| |||||||||||| |||||||||    
T  40588870 ggctactgcctccccctccaaaactgttatatttgcccgctgccatttcgtttgagcccgaataaattgcct 40588941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 237 - 319
Target Start/End: Original strand, 29931232 - 29931314
Alignment:
Q  237 ataaaacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagtt 319  Q
    |||| ||||||| ||||||||| ||| ||||||||| ||||| ||| ||||||||||||||||||||  ||||||||||||||    
T  29931232 ataacacttttattaaactgcctttattttataagagaaagaaaaaattaaagttgcattgaaaattatgtgagagaaaagtt 29931314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 183 - 320
Target Start/End: Complemental strand, 2812991 - 2812864
Alignment:
Q  183 tcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaa 282  Q
    |||||||| ||||||||| ||| | |||| |||  |||||||||||||||| |||||| ||||||||||||||||||         |||||||||| |||    
T  2812991 tcgttttagccaattgcatacaaattaagtaattgaatgaaataatcattagacataacacttttactaaactgccc---------aagaaaaagaaaaa 2812901  T
Q  283 cttaaagttgcattgaaaattccgtgagagaaaagtta 320  Q
    |||||| ||||||||||||||  | |||||||||||||    
T  2812900 cttaaa-ttgcattgaaaattgtgcgagagaaaagtta 2812864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 244 - 346
Target Start/End: Complemental strand, 27416657 - 27416551
Alignment:
Q  244 ttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgt----gagagaaaagttatagtatttattaagggtaa 339  Q
    |||||||||| |  ||||||||||||||||||||||||||||| | ||||||||||||||  ||    |||| |||||||  |||||||||| |||||||    
T  27416657 ttttactaaaataaccttactttataagaaaaagacaaacttagaattgcattgaaaattgtgtgtgagagaaaaaagttggagtatttattgagggtaa 27416558  T
Q  340 agttgga 346  Q
    |||||||    
T  27416557 agttgga 27416551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 7127274 - 7127136
Alignment:
Q  1 gtaaggctgctgcctccccctccaaaactgtcatattaacccgctgccatttcatttgagcccgaa-aaaattgcctagagaagtctctaacacaacacg 99  Q
    |||||||| || ||||||||||||||||| |||||||  |||| | |||||||||||| || |||| ||| || ||  ||| |||||||||||||||| |    
T  7127274 gtaaggctactacctccccctccaaaactttcatatttgcccgtttccatttcatttgtgcacgaataaatttcccccgag-agtctctaacacaacatg 7127176  T
Q  100 caaaagatataatatggttacggtcatggaacgcggcatc 139  Q
    || | ||| ||| | ||||||| |||||||||||||||||    
T  7127175 cagaggatgtaagacggttacgttcatggaacgcggcatc 7127136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 244 - 348
Target Start/End: Complemental strand, 13109143 - 13109037
Alignment:
Q  244 ttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgt--gagagaaaagttatagtatttattaagggtaaag 341  Q
    |||||||||| |  ||||| ||||||||||||||||||| ||||| ||||||| ||||||  ||  ||||||||||||  |||||||||||||| || ||    
T  13109143 ttttactaaaataaccttattttataagaaaaagacaaatttaaatttgcattaaaaattgtgtgagagagaaaagttggagtatttattaaggatagag 13109044  T
Q  342 ttggaag 348  Q
    |||||||    
T  13109043 ttggaag 13109037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 218 - 344
Target Start/End: Complemental strand, 32737945 - 32737820
Alignment:
Q  218 aatgaaataatcattaaacataaaacttttactaaactgccctt-actttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaa 316  Q
    ||||||||| |||||| | |||| ||||||  |||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||   ||| ||||||    
T  32737945 aatgaaata-tcattagatataacacttttgttaaactgccctttactttataagaaaaagaaaaacttaaa-ttgcattgaaaattatatgaaagaaaa 32737848  T
Q  317 gttatagtatttattaagggtaaagttg 344  Q
    |||   ||||||||||||  ||||||||    
T  32737847 gttggcgtatttattaagaataaagttg 32737820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 260 - 320
Target Start/End: Original strand, 1774085 - 1774143
Alignment:
Q  260 ttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagtta 320  Q
    ||||||||||||||||||||||| ||||||||||||||||||||  || ||||||||||||    
T  1774085 ttactttataagaaaaagacaaaattaaagttgcattgaaaatt--gtaagagaaaagtta 1774143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 158 - 258
Target Start/End: Original strand, 8106800 - 8106900
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgc 257  Q
    |||||| ||| ||| ||||| ||||||| ||||  |||||||||||| | ||| |||| ||||||||||||||||| |||||  ||||||| ||||||||    
T  8106800 tactccctccattttaaaatgagtatcgatttagtcaattgcacacaaattaaagaatgaaatgaaataatcattagacatagcacttttattaaactgc 8106899  T
Q  258 c 258  Q
    |    
T  8106900 c 8106900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 468 - 515
Target Start/End: Original strand, 13343591 - 13343638
Alignment:
Q  468 tggattttggaaaaagctattcctaatagcttttcattttagagtcaa 515  Q
    |||||||||| |||||||| ||||||||||||||||||||||||||||    
T  13343591 tggattttgggaaaagctaatcctaatagcttttcattttagagtcaa 13343638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 244 - 348
Target Start/End: Original strand, 18673097 - 18673202
Alignment:
Q  244 ttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgaga--gaaaagttatagtatttattaagggtaaag 341  Q
    |||||||||| |  |||||||| || ||||||| ||||||||||| ||| ||||||||||  ||||||  ||||||||  |||||||||||| |||||||    
T  18673097 ttttactaaaataaccttactt-atcagaaaaatacaaacttaaaattgtattgaaaattgtgtgagagagaaaagttggagtatttattaaaggtaaag 18673195  T
Q  342 ttggaag 348  Q
    |||||||    
T  18673196 ttggaag 18673202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 216
Target Start/End: Complemental strand, 4530107 - 4530049
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaata 216  Q
    |||||||||||||||||||| ||| |||||||| ||||||||||||||| |||| ||||    
T  4530107 tactccatccgtttcaaaatgagtgtcgttttagccaattgcacacagattaagaaata 4530049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 260 - 319
Target Start/End: Complemental strand, 26439102 - 26439045
Alignment:
Q  260 ttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagtt 319  Q
    ||||||||||| |||||  |||||||||||||||||||||||||  ||||||||||||||    
T  26439102 ttactttataacaaaaa--caaacttaaagttgcattgaaaattgtgtgagagaaaagtt 26439045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 208 - 318
Target Start/End: Complemental strand, 156410 - 156309
Alignment:
Q  208 taaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgt 307  Q
    |||||| | ||||||||||||||||| |||||| ||||||| |||||||||          ||||||| |||||||||||||||| ||||||||||  |     
T  156410 taaggattgaaatgaaataatcattagacataacacttttattaaactgcc---------gaagaaaaggacaaacttaaagttgtattgaaaattgtgc 156320  T
Q  308 gagagaaaagt 318  Q
    |||||||||||    
T  156319 gagagaaaagt 156309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 470 - 520
Target Start/End: Original strand, 10011230 - 10011280
Alignment:
Q  470 gattttggaaaaagctattcctaatagcttttcattttagagtcaaaatag 520  Q
    |||||||  |||||||| |||||||||||||||||||||| ||||||||||    
T  10011230 gattttgagaaaagctaatcctaatagcttttcattttagggtcaaaatag 10011280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 470 - 520
Target Start/End: Original strand, 36396766 - 36396816
Alignment:
Q  470 gattttggaaaaagctattcctaatagcttttcattttagagtcaaaatag 520  Q
    |||||||  |||||||| |||||||||||||||||||||| ||||||||||    
T  36396766 gattttgagaaaagctaatcctaatagcttttcattttagggtcaaaatag 36396816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 470 - 520
Target Start/End: Original strand, 42586713 - 42586763
Alignment:
Q  470 gattttggaaaaagctattcctaatagcttttcattttagagtcaaaatag 520  Q
    |||||||  |||||||| ||||||||||||||||||||||||||| |||||    
T  42586713 gattttgagaaaagctaatcctaatagcttttcattttagagtcataatag 42586763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 193 - 253
Target Start/End: Original strand, 37185609 - 37185669
Alignment:
Q  193 caattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaa 253  Q
    |||||||||| | | ||||| ||| |||||||||||||||| |||||| ||||||||||||    
T  37185609 caattgcacataaattaaggtatagaatgaaataatcattagacataacacttttactaaa 37185669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 133
Target Start/End: Complemental strand, 37712114 - 37711998
Alignment:
Q  17 cccctccaaaactgtcatattaacccgctgccatttcatttgagcccgaaaaaattgcctagagaagtctctaacacaacacgcaaaagatataatatgg 116  Q
    ||||| |||||||||||||||  ||||||| |||||| ||| ||| | || |||||||| | |  ||| ||||||||||||||||||| || ||| ||      
T  37712114 ccccttcaaaactgtcatattttcccgctgtcatttcgttttagctcaaataaattgcccacacgagtttctaacacaacacgcaaaaaatgtaagataa 37712015  T
Q  117 ttacggtcatggaacgc 133  Q
    |||| ||||||| ||||    
T  37712014 ttacagtcatggtacgc 37711998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 415 - 445
Target Start/End: Original strand, 515112 - 515142
Alignment:
Q  415 aaatgacattcattttgaaacggagggagta 445  Q
    |||||||||||||||||||||||||||||||    
T  515112 aaatgacattcattttgaaacggagggagta 515142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 4760471 - 4760533
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaat 220  Q
    |||||||||||||| ||||| ||| ||| |||| ||||||||||| ||| |||||||| ||||    
T  4760471 tactccatccgttttaaaatgagtgtcgctttagccaattgcacatagattaaggaatgaaat 4760533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 269 - 331
Target Start/End: Complemental strand, 43938250 - 43938188
Alignment:
Q  269 aagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagttatagtatttatt 331  Q
    |||||||||| ||||||||||||||||| |||| |  | ||||||||||||  ||||||||||    
T  43938250 aagaaaaagataaacttaaagttgcattaaaaagtgtgcgagagaaaagttggagtatttatt 43938188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 410 - 443
Target Start/End: Original strand, 36669891 - 36669924
Alignment:
Q  410 ggctaaaatgacattcattttgaaacggagggag 443  Q
    |||||||| |||||||||||||||||||||||||    
T  36669891 ggctaaaacgacattcattttgaaacggagggag 36669924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 215
Target Start/End: Complemental strand, 39463498 - 39463441
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaat 215  Q
    |||||| ||||||||||||| ||| ||| |||| ||||||||||||| | ||||||||    
T  39463498 tactccctccgtttcaaaatgagtgtcgctttagccaattgcacacatattaaggaat 39463441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 287 - 340
Target Start/End: Complemental strand, 42946233 - 42946180
Alignment:
Q  287 aagttgcattgaaaattccgtgagagaaaagttatagtatttattaagggtaaa 340  Q
    |||||||||| ||||||  ||||||||||| ||| |||||||||| ||||||||    
T  42946233 aagttgcattaaaaattgtgtgagagaaaaattagagtatttattgagggtaaa 42946180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 97; Significance: 3e-47; HSPs: 86)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 160 - 344
Target Start/End: Complemental strand, 34096251 - 34096067
Alignment:
Q  160 ctccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgccc 259  Q
    |||||||||||| || || ||| ||||||||  |||||||||||| | |||  ||| ||||||||||||||||| || ||| |||||||||||| |||||    
T  34096251 ctccatccgttttaagatgagtgtcgttttaggcaattgcacacaaattaaaaaatgaaatgaaataatcattagacttaacacttttactaaattgccc 34096152  T
Q  260 ttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagttatagtatttattaagggtaaagttg 344  Q
    |||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||||  | |||||||| ||||||||||||    
T  34096151 ttactttataagaaaaagacaaacttaaagtttcattgaaaattgtgtgagagaaaagtttgaatatttattgagggtaaagttg 34096067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 161 - 319
Target Start/End: Complemental strand, 34360239 - 34360081
Alignment:
Q  161 tccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgccct 260  Q
    ||||||| ||||| ||| ||| ||| ||||  ||||||||  |||| |||||||| ||||||||||||||||| | |||| |||||||||||||||||||    
T  34360239 tccatccatttcagaatgagtgtcgctttagtcaattgcatccagattaaggaatgaaatgaaataatcattagatataacacttttactaaactgccct 34360140  T
Q  261 tactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagtt 319  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  34360139 tactttataagaaaaagacaaacttaaagttgcattgaaaattgtgtgagagaaaagtt 34360081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 157 - 345
Target Start/End: Complemental strand, 42672627 - 42672439
Alignment:
Q  157 ttactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactg 256  Q
    ||||||||| ||||||||||| ||| ||  ||||  |||||||||||| | ||||||||| |||||||||||||||| |||||| ||||||||||||||     
T  42672627 ttactccatgcgtttcaaaatgagtgtcaatttagtcaattgcacacaaattaaggaatataatgaaataatcattagacataacacttttactaaacta 42672528  T
Q  257 cccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagttatagtatttattaagggtaaagttgg 345  Q
    | | |||||||||||||||||||||| ||||||||| ||||||||||  || ||||| |||||  |||||||||| |||||||||||||    
T  42672527 ctcatactttataagaaaaagacaaatttaaagttgtattgaaaattgtgtaagagagaagttgaagtatttattgagggtaaagttgg 42672439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 158 - 319
Target Start/End: Original strand, 36805366 - 36805526
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgc 257  Q
    |||||| || |||| ||||| ||| |||||||||  ||||||||||||| |||||||| ||||||||||||||||| |||||| |||||||||||||||     
T  36805366 tactccttctgttttaaaatgagtgtcgttttact-aattgcacacagattaaggaatgaaatgaaataatcattagacataacacttttactaaactgt 36805464  T
Q  258 ccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagtt 319  Q
    ||||| |||||| |||||||||||||||||||||| ||||||||||  |||||| |||||||    
T  36805465 ccttagtttatatgaaaaagacaaacttaaagttgtattgaaaattgtgtgagaaaaaagtt 36805526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 211 - 348
Target Start/End: Complemental strand, 37445844 - 37445707
Alignment:
Q  211 ggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgag 310  Q
    ||||| ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||  ||||     
T  37445844 ggaatgaaatgaaataatcattagacataacacttttactaaactgcccttactttataagaaaaagacaaatttaaagttgcattaaaaattatgtgaa 37445745  T
Q  311 agaaaagttatagtatttattaagggtaaagttggaag 348  Q
    |||||| ||  | |||||||| ||||||||||||||||    
T  37445744 agaaaaatttgaatatttattgagggtaaagttggaag 37445707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 173 - 348
Target Start/End: Complemental strand, 30022289 - 30022115
Alignment:
Q  173 aaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttactttataaga 272  Q
    ||||| ||| |||||||| | ||||||||| ||| |||||||| |||| |||||||||||| | |||| |||||||||||||| || ||  | |||||||    
T  30022289 aaaatgagtgtcgttttagcaaattgcacatagattaaggaatgaaataaaataatcattatatataacacttttactaaactacc-ttcttgtataaga 30022191  T
Q  273 aaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagttatagtatttattaagggtaaagttggaag 348  Q
    |||||||||||| ||||||||||||||||||  ||||||||||||||  |||||||||| ||||||||||||||||    
T  30022190 aaaagacaaactcaaagttgcattgaaaattgtgtgagagaaaagttgaagtatttattgagggtaaagttggaag 30022115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 158 - 341
Target Start/End: Complemental strand, 44855481 - 44855298
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgc 257  Q
    |||||| ||||||||||||| ||  ||| ||||| |  | ||||||| | |||| |||| ||||||||||||||| || ||||  |||||||||||||||    
T  44855481 tactccctccgtttcaaaatgagcgtcgctttacgctttggcacacaaattaagaaatagaatgaaataatcattgaatataacgcttttactaaactgc 44855382  T
Q  258 ccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagttatagtatttattaagggtaaag 341  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||  ||||||||||||||  | |||||||| |||||||||    
T  44855381 ccttactttataaggaaaagacaaaattaaagttgcattgaaaattgtgtgagagaaaagttggattatttattgagggtaaag 44855298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 208 - 348
Target Start/End: Complemental strand, 19849271 - 19849131
Alignment:
Q  208 taaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgt 307  Q
    |||| ||| |||| ||||||| |||| | |||| | ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||  ||    
T  19849271 taagaaatgaaataaaataattattacatataacatttttactaaactgccctcactttataagaaaaaaacaaacttaaagttgcattgaaaattgtgt 19849172  T
Q  308 gagagaaaagttatagtatttattaagggtaaagttggaag 348  Q
    ||||||||||||  |||||||||| ||||||||||||||||    
T  19849171 gagagaaaagttggagtatttattgagggtaaagttggaag 19849131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 157 - 348
Target Start/End: Complemental strand, 22212579 - 22212388
Alignment:
Q  157 ttactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactg 256  Q
    ||||||||||||||| |||||  || ||| |||| ||||||| ||||| | |||||||| ||||||||||||||||| |||||| |||||||| ||||||    
T  22212579 ttactccatccgttttaaaatgggtgtcgctttagccaattgaacacatattaaggaatgaaatgaaataatcattagacataacacttttacaaaactg 22212480  T
Q  257 cccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagttatagtatttattaagggtaaagttggaag 348  Q
    || ||  ||||||  |||||  |||||||||||||| ||||||||||  |||||| ||| |||  |||||||||| ||||||||||||||||    
T  22212479 cctttgttttatataaaaaactcaaacttaaagttgtattgaaaattgtgtgagaaaaatgttggagtatttattgagggtaaagttggaag 22212388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 18442281 - 18442419
Alignment:
Q  1 gtaaggctgctgcctccccctccaaaactgtcatattaacccgctgccatttcatttgagcccgaaaaaattgcctagagaagtctctaacacaacacgc 100  Q
    |||||||| |||||||||||||||| |||||||||||  |||||| ||||||| |||||||||||| |||||||| |  | |||||||||||||||||||    
T  18442281 gtaaggctactgcctccccctccaatactgtcatattttcccgcttccatttcgtttgagcccgaataaattgcccatgggagtctctaacacaacacgc 18442380  T
Q  101 aaaagatataatatggttacggtcatggaacgcggcatc 139  Q
    ||||| | |||||||||| ||||||||||||||| ||||    
T  18442381 aaaagttgtaatatggttgcggtcatggaacgcgacatc 18442419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 165 - 319
Target Start/End: Original strand, 32140908 - 32141062
Alignment:
Q  165 tccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttact 264  Q
    ||||||||||||| ||| |   |||| ||||||| ||||||| |||| |||  |||||||||||||||| |||||| |||||||||||||||||| ||||    
T  32140908 tccgtttcaaaatgagtgttaatttaaccaattgtacacagattaagaaattgaatgaaataatcattagacataacacttttactaaactgcccctact 32141007  T
Q  265 ttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagtt 319  Q
    ||||||  ||||||||||| |||| ||||||||||||||  ||||||||||||||    
T  32141008 ttataaacaaaagacaaacataaatttgcattgaaaattgtgtgagagaaaagtt 32141062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 222 - 348
Target Start/End: Original strand, 45520437 - 45520563
Alignment:
Q  222 aaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagttat 321  Q
    |||||||||||| |||||| ||||||||||| |||||||||| ||||||||| |||||||||||||||||||||| ||||||   |||||||||||||      
T  45520437 aaataatcattagacataacacttttactaagctgcccttacattataagaataagacaaacttaaagttgcattaaaaattgtatgagagaaaagtttg 45520536  T
Q  322 agtatttattaagggtaaagttggaag 348  Q
    ||||||||| |||| ||||||||||||    
T  45520537 agtatttatcaaggataaagttggaag 45520563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 218 - 319
Target Start/End: Original strand, 15501129 - 15501230
Alignment:
Q  218 aatgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaag 317  Q
    |||||||||||||||| |||||| | ||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||  ||||||||||||    
T  15501129 aatgaaataatcattagacataacatttttactaaactgcccttactttataagaaaaatacaaacttaaagttgcattaaaaattgtgtgagagaaaag 15501228  T
Q  318 tt 319  Q
    ||    
T  15501229 tt 15501230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 158 - 348
Target Start/End: Complemental strand, 47321384 - 47321192
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgc 257  Q
    |||||| ||||||| ||||| ||| |||||||| ||||||||||||||| ||||||||  ||| ||||| |||     ||||  | |||||||||| |      
T  47321384 tactccctccgttttaaaatgagtgtcgttttagccaattgcacacagattaaggaattgaataaaatagtcaaatgtcatagcaattttactaaaataa 47321285  T
Q  258 ccttactttataagaaaaagacaaacttaaagttgcattgaaaat--tccgtgagagaaaagttatagtatttattaagggtaaagttggaag 348  Q
    |||||||||||||||||||||||| ||||||||||||||||||||  | || | ||||||||||| |||||||||| ||||||||||||||||    
T  47321284 ccttactttataagaaaaagacaaccttaaagttgcattgaaaattgtgcgagtgagaaaagttagagtatttattgagggtaaagttggaag 47321192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 200 - 319
Target Start/End: Complemental strand, 21045328 - 21045209
Alignment:
Q  200 acacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaa 299  Q
    ||||||| ||||||||  |||||||||||||||  | ||||  |||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  21045328 acacagattaaggaatggaatgaaataatcattggatataaggcttttattaaactgcccttactttataagaaaaagacaaaattaaagttgcattgaa 21045229  T
Q  300 aattccgtgagagaaaagtt 319  Q
    ||||  ||||||||||||||    
T  21045228 aattgtgtgagagaaaagtt 21045209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 49951364 - 49951226
Alignment:
Q  1 gtaaggctgctgcctccccctccaaaactgtcatattaacccgctgccatttcatttgagcccgaaaaaatt-gcctagagaagtctctaacacaacacg 99  Q
    |||||||| |||||||||||||||| |||||||||||  |||||||||||||| |||||||||||| ||||| |||  ||||| ||||||||||| || |    
T  49951364 gtaaggctactgcctccccctccaatactgtcatatttgcccgctgccatttcgtttgagcccgaataaattggccgcgagaa-tctctaacacagcatg 49951266  T
Q  100 caaaagatataatatggttacggtcatggaacgcggcatc 139  Q
    |||||||| |||||||||| ||||||||||| ||||||||    
T  49951265 caaaagatgtaatatggttgcggtcatggaatgcggcatc 49951226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 51735107 - 51735245
Alignment:
Q  1 gtaaggctgctgcctccccctccaaaactgtcatattaacccgctgccatttcatttgagcccgaaaaaattgcctagagaagtctctaacacaacacgc 100  Q
    |||||||| ||||||||||||||||||||||||||||  | ||||| |||||| ||| |||||||| |||||| | |  ||||||||||||||||||| |    
T  51735107 gtaaggctactgcctccccctccaaaactgtcatatttgcacgctgtcatttcgtttaagcccgaataaattgtcaacggaagtctctaacacaacacac 51735206  T
Q  101 aaaagatataatatggttacggtcatggaacgcggcatc 139  Q
    ||||||| ||| ||||||||  |||||||||||||||||    
T  51735207 aaaagatgtaagatggttacaatcatggaacgcggcatc 51735245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 218 - 319
Target Start/End: Complemental strand, 52732768 - 52732667
Alignment:
Q  218 aatgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaag 317  Q
    |||||||||||||||  | |||| |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||  ||||||||||||    
T  52732768 aatgaaataatcattggatataacacttttactaaactgcccttactttataaggaaaagacaaaattaaagttgcattgaaaattgtgtgagagaaaag 52732669  T
Q  318 tt 319  Q
    ||    
T  52732668 tt 52732667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 158 - 345
Target Start/End: Complemental strand, 30492957 - 30492778
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgc 257  Q
    |||||| ||||||||||||| ||| | |||||| ||||||||||||| | ||||||||  |||||||||||||||| |||||| ||||||||| ||||||    
T  30492957 tactccctccgtttcaaaatgagtgtggttttagccaattgcacacaaattaaggaatggaatgaaataatcattagacataacacttttactgaactgc 30492858  T
Q  258 ccttactttataagaaaaagacaaacttaaagttgcatt-gaaaattccgtgagagaaaagttatagtatttattaagggtaaagttgg 345  Q
    ||         ||||||||||||||||||||||||||||  ||||||  |  |||||||||||  |||||||||| |||||||||||||    
T  30492857 cc---------aagaaaaagacaaacttaaagttgcattaaaaaattgtgcaagagaaaagttggagtatttattgagggtaaagttgg 30492778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 28537923 - 28538059
Alignment:
Q  1 gtaaggctgctgcctccccctccaaaactgtcatattaacccgctgccatttcatttgagcccgaaaaaattgcctagagaagtctctaacacaacacgc 100  Q
    |||||||| |||||||||||||  ||||| |||||||  |||||||||||||| |||||||||||| ||||||||    | |||||||||||||||||||    
T  28537923 gtaaggctactgcctccccctc--aaactatcatattttcccgctgccatttcgtttgagcccgaataaattgcccgtgggagtctctaacacaacacgc 28538020  T
Q  101 aaaagatataatatggttacggtcatggaacgcggcatc 139  Q
    |||| || ||||||||||||| ||||||||||| |||||    
T  28538021 aaaatatgtaatatggttacgatcatggaacgcagcatc 28538059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 165 - 348
Target Start/End: Original strand, 17499637 - 17499822
Alignment:
Q  165 tccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttact 264  Q
    ||||||| ||||| ||| ||||||||  |||||||||||||| ||| |||| |||| ||||| |||     ||||| | |||||||||| |  | |||||    
T  17499637 tccgttttaaaatgagtgtcgttttagtcaattgcacacagattaatgaatgaaataaaatagtcaaatgtcataacaattttactaaaataacattact 17499736  T
Q  265 ttataagaaaaagacaaacttaaagttgcattgaaaat--tccgtgagagaaaagttatagtatttattaagggtaaagttggaag 348  Q
    ||||||||||||||||||||||||||||||||||||||  |  | ||||||||||||  |||||||||| ||||||||||||||||    
T  17499737 ttataagaaaaagacaaacttaaagttgcattgaaaattgtatgagagagaaaagtttgagtatttattgagggtaaagttggaag 17499822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 13 - 139
Target Start/End: Original strand, 32577196 - 32577321
Alignment:
Q  13 cctccccctccaaaactgtcatattaacccgctgccatttcatttgagcccgaaaaaattgcctagagaagtctctaacacaacacgcaaaagatataat 112  Q
    |||||||||||||||| ||||||||  |||| ||||||||| |||||||||||| ||||||||  | ||| |||||||||||||||||||||||| |||     
T  32577196 cctccccctccaaaacagtcatatttgcccgttgccatttcgtttgagcccgaataaattgccccgggaa-tctctaacacaacacgcaaaagatgtaag 32577294  T
Q  113 atggttacggtcatggaacgcggcatc 139  Q
    ||||||| ||||||||||||| |||||    
T  32577295 atggttaaggtcatggaacgcagcatc 32577321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 157 - 348
Target Start/End: Complemental strand, 45889803 - 45889610
Alignment:
Q  157 ttactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactg 256  Q
    |||||| |||||||||||||| ||| |||||||| ||||||||||||| | |||||||| |||| || || |||      |||  | |||||||||| |     
T  45889803 ttactctatccgtttcaaaatgagtgtcgttttagccaattgcacacatattaaggaatgaaataaagtagtcaaatgttatagcaattttactaaaata 45889704  T
Q  257 cccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgt--gagagaaaagttatagtatttattaagggtaaagttggaag 348  Q
     ||||||||||||||||||| ||||||||||||||||||||||||||  ||  ||||||||||||  |||||||||| |||||||||| |||||    
T  45889703 accttactttataagaaaaaaacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgagggtaaagtaggaag 45889610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 158 - 348
Target Start/End: Complemental strand, 24259850 - 24259658
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgc 257  Q
    |||| ||||||||| ||||| ||| ||| |||| ||||||||||| | | |||||||| |||| || || |||     ||||| | |||||||||| |      
T  24259850 tacttcatccgttttaaaatgagtgtcgctttatccaattgcacatatattaaggaatgaaataaagtagtcaaatgtcataacaattttactaaaataa 24259751  T
Q  258 ccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgt--gagagaaaagttatagtatttattaagggtaaagttggaag 348  Q
    |||||||||||||||||| |||||||||||||||||||||||||||  ||  ||||||||||||  |||||||||| ||||||||||||||||    
T  24259750 ccttactttataagaaaatgacaaacttaaagttgcattgaaaattgtgtgagagagaaaagttggagtatttattgagggtaaagttggaag 24259658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 218 - 319
Target Start/End: Original strand, 39671081 - 39671182
Alignment:
Q  218 aatgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaag 317  Q
    |||||||| ||||||| |||||| || ||||||||||| || ||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||    
T  39671081 aatgaaattatcattagacataacacatttactaaactacctttactttataagaaaaaaacaaacttaaagttgcattgaaaattgtgtgagagaaaag 39671180  T
Q  318 tt 319  Q
    ||    
T  39671181 tt 39671182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 161 - 348
Target Start/End: Complemental strand, 31987529 - 31987351
Alignment:
Q  161 tccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgccct 260  Q
    ||||||||||| ||||| ||| ||||||||   ||||||| ||| | |||  ||||||||||||||||||||| | |||| ||||||||||||||||       
T  31987529 tccatccgttttaaaatgagtgtcgttttagttaattgcatacaaattaaaaaataaaatgaaataatcattagagataacacttttactaaactgctg- 31987431  T
Q  261 tactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagttatagtatttattaagggtaaagttggaag 348  Q
            |||||||||||||| ||||||||||||||||||||  | ||||||||||||  |||||||||| ||||||||||||||||    
T  31987430 --------aagaaaaagacaaatttaaagttgcattgaaaattatgcgagagaaaagttggagtatttattgagggtaaagttggaag 31987351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 165 - 344
Target Start/End: Complemental strand, 54092179 - 54092009
Alignment:
Q  165 tccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttact 264  Q
    ||||||| ||||| ||| ||||||||  |||||||| ||| | |||||||| |||||||||| ||||||||||||| |||||||| ||| |||||         
T  54092179 tccgttttaaaatgagtgtcgttttaatcaattgcatacaaattaaggaatgaaatgaaatagtcattaaacataatacttttaccaaattgccc----- 54092085  T
Q  265 ttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagttatagtatttattaagggtaaagttg 344  Q
        |||||||||||||||||||| ||| ||||||||||  | ||||||||||||  |||||||||| ||||||||||||    
T  54092084 ----aagaaaaagacaaacttaaaattgtattgaaaattatgcgagagaaaagttggagtatttattgagggtaaagttg 54092009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 158 - 319
Target Start/End: Original strand, 56556194 - 56556352
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgc 257  Q
    |||||| ||||||| ||||| ||| ||| |||| ||||||||||||||| ||||||||  ||||||||   ||||| |||||| |||||||||||| |      
T  56556194 tactccctccgttttaaaatgagtgtcgctttaaccaattgcacacagattaaggaattgaatgaaat---cattagacataacacttttactaaattat 56556290  T
Q  258 ccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagtt 319  Q
    |||| |||||||||||||| ||||||||||  || |||||||||||  ||||||||||||||    
T  56556291 ccttgctttataagaaaaatacaaacttaacattacattgaaaattgtgtgagagaaaagtt 56556352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 165 - 348
Target Start/End: Complemental strand, 34124527 - 34124342
Alignment:
Q  165 tccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttact 264  Q
    ||||||||||||| ||| ||| |||| ||||||||||||||| |||| |||  ||| || || |||     ||||| | |||||||||| |  |||||||    
T  34124527 tccgtttcaaaatgagtgtcgctttagccaattgcacacagattaagaaattgaataaagtagtcaaatgtcataacaattttactaaaataaccttact 34124428  T
Q  265 ttataagaaaaagacaaacttaaagttgcattgaaaattccgt--gagagaaaagttatagtatttattaagggtaaagttggaag 348  Q
    |||||||||||| ||||||||||||||| ||||||||||  ||  ||||||||||||  |||||||||| ||||||||||||||||    
T  34124427 ttataagaaaaatacaaacttaaagttgtattgaaaattgtgtgagagagaaaagtttgagtatttattgagggtaaagttggaag 34124342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 158 - 316
Target Start/End: Original strand, 43421039 - 43421197
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgc 257  Q
    |||||||||||||||||||| ||| | | ||||  |  | ||||||| | |||| |||  |||||||||||||||  | |||| |||||||||||| |||    
T  43421039 tactccatccgtttcaaaatgagtgttgctttaaactttggcacacaaattaagaaatggaatgaaataatcattggatataatacttttactaaattgc 43421138  T
Q  258 ccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaa 316  Q
     |||||||||||||||||||||||| |||||||||||||||| |||  |||||||||||    
T  43421139 tcttactttataagaaaaagacaaaattaaagttgcattgaatattgtgtgagagaaaa 43421197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 55735060 - 55734922
Alignment:
Q  1 gtaaggctgctgcctccccctccaaaactgtcatattaacccgctgccatttcatttgagcccgaaaaaattgcctagagaagtctctaacacaacacgc 100  Q
    |||||||| |||||||||||||||| |||||||||||  | |||| ||||||| |||||||||||| |||||||  |  | |||||||||||||||||||    
T  55735060 gtaaggctactgcctccccctccaatactgtcatatttgctcgcttccatttcgtttgagcccgaacaaattgctcatgggagtctctaacacaacacgc 55734961  T
Q  101 aaaagatataatatggttacggtcatggaacgcggcatc 139  Q
    ||||||| ||||||||||  | ||||||| |||| ||||    
T  55734960 aaaagatgtaatatggttgagatcatggagcgcgacatc 55734922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 158 - 348
Target Start/End: Complemental strand, 28116484 - 28116292
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgc 257  Q
    |||||||||||||||||||| ||| ||  |||| |||||||||||| || ||||||||  ||| || || |||     ||||  | |||||||||| |      
T  28116484 tactccatccgtttcaaaatgagtgtcactttaaccaattgcacacggattaaggaatggaataaagtagtcaaatgtcatagcaattttactaaaataa 28116385  T
Q  258 ccttactttataagaaaaagacaaacttaaagttgcattgaaaat--tccgtgagagaaaagttatagtatttattaagggtaaagttggaag 348  Q
    |||||||||||||||| ||||||||||||||||| || |||||||  |  ||||||||||||||  |||||||||||||||||||||||||||    
T  28116384 ccttactttataagaataagacaaacttaaagttacactgaaaattgtgtgtgagagaaaagtttgagtatttattaagggtaaagttggaag 28116292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 218 - 319
Target Start/End: Complemental strand, 51930753 - 51930652
Alignment:
Q  218 aatgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaag 317  Q
    ||||||||||| |||  | ||||  ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||  ||||||||||||    
T  51930753 aatgaaataataattggatataacgcttttactaaactgcccttactttataagaaaatgacaaaattaaagttgcattgaaaattgtgtgagagaaaag 51930654  T
Q  318 tt 319  Q
    ||    
T  51930653 tt 51930652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 161 - 269
Target Start/End: Original strand, 32140794 - 32140902
Alignment:
Q  161 tccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgccct 260  Q
    ||||||||||||||||| ||| ||||||||  |||||||||||| | |||||||| |||| ||||||||||||||||||| ||||||||||||||   ||    
T  32140794 tccatccgtttcaaaatgagtgtcgttttagtcaattgcacacaaattaaggaatgaaatcaaataatcattaaacataacacttttactaaactattct 32140893  T
Q  261 tactttata 269  Q
    |||||||||    
T  32140894 tactttata 32140902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 158 - 253
Target Start/End: Complemental strand, 29840292 - 29840197
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaa 253  Q
    |||||| ||||||||||||| ||| |||||||||||||||||||||| | ||||||||  |||||||||||||||| |||||| ||||||||||||    
T  29840292 tactccctccgtttcaaaatgagtgtcgttttacccaattgcacacaaattaaggaatggaatgaaataatcattagacataacacttttactaaa 29840197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 41835447 - 41835585
Alignment:
Q  1 gtaaggctgctgcctccccctccaaaactgtcatattaacccgctgccatttcatttgagcccgaaaaaattgccta-gagaagtctctaacacaacacg 99  Q
    |||||||| |||| |||||||||||||||||||||||  || |||| |||||  |||||||||||| |||||| ||  |||| |||||||||||||||||    
T  41835447 gtaaggctactgcatccccctccaaaactgtcatatttgccagctgtcattttgtttgagcccgaataaattgtctgcgaga-gtctctaacacaacacg 41835545  T
Q  100 caaaagatataatatggttacggtcatggaacgcggcatc 139  Q
    |||||| | ||||||||||||| ||| |||||| ||||||    
T  41835546 caaaagttgtaatatggttacgttcaaggaacgtggcatc 41835585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 29655802 - 29655939
Alignment:
Q  1 gtaaggctgctgcctccccctccaaaactgtcatattaacccgctgccatttcatttgagcccgaaaaaattgcctagagaagtctctaacacaacacgc 100  Q
    |||||||| ||||||| ||||||||||| ||||||||  |||||||||||||  |||||||||||| |||||||| |  | || |||||||||||||  |    
T  29655802 gtaaggctactgcctctccctccaaaacagtcatatttgcccgctgccattttgtttgagcccgaataaattgcccacgggagcctctaacacaaca-ac 29655900  T
Q  101 aaaagatataatatggttacggtcatggaacgcggcatc 139  Q
    ||||||| ||| | ||||||| |||||||||||||||||    
T  29655901 aaaagatgtaagagggttacgatcatggaacgcggcatc 29655939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 21321578 - 21321446
Alignment:
Q  1 gtaaggctgctgcctccccctccaaaactgtcatattaacccgctgccatttcatttgagcccgaa-aaaattgcctagagaagtctctaacacaacacg 99  Q
    ||||||||  || ||||||||||||||||||||||||  |||| ||||||||| |||||||||||| ||| || ||  ||| ||||||||| |||||| |    
T  21321578 gtaaggctattgtctccccctccaaaactgtcatatttgcccgttgccatttcgtttgagcccgaataaatttcccgcgag-agtctctaatacaacatg 21321480  T
Q  100 caaaagatataatatggttacggtcatggaacgc 133  Q
    |||||| | |||||||||||||||||||||||||    
T  21321479 caaaagttgtaatatggttacggtcatggaacgc 21321446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 2064904 - 2064773
Alignment:
Q  1 gtaaggctgctgcctccccctccaaaactgtcatattaacccgctgccatttcatttgagcccgaaaaaattgcctagagaagtctctaacacaacacgc 100  Q
    |||||||| |||||||||||| ||| |||||||||||  ||||||| |||||  |||||||||||| |||||  |    | |||||||||||||||||||    
T  2064904 gtaaggctactgcctcccccttcaatactgtcatatttgcccgctgtcattttgtttgagcccgaataaattatccgcgggagtctctaacacaacacgc 2064805  T
Q  101 aaaagatataatatggttacggtcatggaacg 132  Q
    | | ||| ||||||||||||||||||||||||    
T  2064804 agaggatgtaatatggttacggtcatggaacg 2064773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 242 - 348
Target Start/End: Complemental strand, 35928642 - 35928538
Alignment:
Q  242 acttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagttatagtatttattaagggtaaag 341  Q
    |||||||||||| |||| | ||||||||||||||||| ||||||||| ||||||||||||||  |||| ||||| |||  |||||||||| |||||||||    
T  35928642 acttttactaaattgccatgactttataagaaaaagataaacttaaaattgcattgaaaatt--gtgaaagaaacgttgcagtatttattgagggtaaag 35928545  T
Q  342 ttggaag 348  Q
    |||||||    
T  35928544 ttggaag 35928538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 37245988 - 37246126
Alignment:
Q  1 gtaaggctgctgcctccccctccaaaactgtcatattaacccgctgccatttcatttgagcccgaaaaaattgcctagagaagtctctaacacaacacgc 100  Q
    |||||||| ||||||||||||||||||||||||||||  |||| | ||||||| |||| ||||||| ||||| ||    | |||||||||||||||| ||    
T  37245988 gtaaggctactgcctccccctccaaaactgtcatatttgcccgtttccatttcgtttgtgcccgaataaatttccctcgggagtctctaacacaacatgc 37246087  T
Q  101 aaaagatataatatggttacggtcatggaacgcggcatc 139  Q
    | | ||| ||| | | |||||||||||||||||||||||    
T  37246088 agaggatgtaagacgattacggtcatggaacgcggcatc 37246126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 258 - 349
Target Start/End: Original strand, 51434270 - 51434363
Alignment:
Q  258 ccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgt--gagagaaaagttatagtatttattaagggtaaagttggaagg 349  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||  ||  ||||||||||||| |||||||||| ||||||||||| |||||    
T  51434270 ccttactttataagaaaaagactaactttaagttgcattgaaaattgtgtgagagagaaaagttaaagtatttattgagggtaaagtttgaagg 51434363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 157 - 319
Target Start/End: Complemental strand, 54512261 - 54512099
Alignment:
Q  157 ttactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactg 256  Q
    ||||| |||| |||||||||| ||||||| ||||  |  |  |||||| | |||| ||| |||||||||||| |||  | ||||   |||||||||||||    
T  54512261 ttacttcatctgtttcaaaatgagtatcgctttagtctttgacacacatattaagaaatgaaatgaaataataattggatataacgtttttactaaactg 54512162  T
Q  257 cccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagtt 319  Q
    | ||||||||||||||||| |||||| |||||||||||||||| |||  ||||||||||||||    
T  54512161 ctcttactttataagaaaatgacaaaattaaagttgcattgaacattgtgtgagagaaaagtt 54512099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 258 - 348
Target Start/End: Complemental strand, 31941697 - 31941605
Alignment:
Q  258 ccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgt--gagagaaaagttatagtatttattaagggtaaagttggaag 348  Q
    |||||||||||||||| |||||||||||||||||||||||||||||  ||  ||||||| ||||  |||||||||| ||||||||||||||||    
T  31941697 ccttactttataagaacaagacaaacttaaagttgcattgaaaattatgtgagagagaatagttggagtatttattgagggtaaagttggaag 31941605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 14 - 139
Target Start/End: Original strand, 43840456 - 43840581
Alignment:
Q  14 ctccccctccaaaactgtcatattaacccgctgccatttcatttgagcccgaaaaaattgcctagagaagtctctaacacaacacgcaaaagatataata 113  Q
    |||||||||||| |||||||||||   ||||||||||||| ||||| |||||| |||||| | |  | |||||||||||||| ||||||||||| ||| |    
T  43840456 ctccccctccaacactgtcatatttgtccgctgccatttcgtttgaccccgaataaattgtccacgggagtctctaacacaaaacgcaaaagatgtaaga 43840555  T
Q  114 tggttacggtcatggaacgcggcatc 139  Q
    |||||| | |||| ||||||||||||    
T  43840556 tggttatgctcatagaacgcggcatc 43840581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 218 - 348
Target Start/End: Original strand, 29289863 - 29289995
Alignment:
Q  218 aatgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaa---agacaaacttaaagttgcattgaaaattccgtgagagaa 314  Q
    |||||||||||||||| |||||| | ||||| ||||  ||| ||||||||||| ||||   ||||||||||||| ||||||||||||||  |||||||||    
T  29289863 aatgaaataatcattagacataatatttttaataaatcgcctttactttataaaaaaaaaaagacaaacttaaaattgcattgaaaattgtgtgagagaa 29289962  T
Q  315 aagttatagtatttattaagggtaaagttggaag 348  Q
    |||||  |||||||||| | ||||||||| ||||    
T  29289963 aagttgaagtatttattga-ggtaaagtttgaag 29289995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 218 - 319
Target Start/End: Original strand, 31817174 - 31817276
Alignment:
Q  218 aatgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaag-acaaacttaaagttgcattgaaaattccgtgagagaaaa 316  Q
    |||||||||||||||  | ||||   |||||||||||| ||||||||||||||||||||  ||||| ||||||||||||||||||||  |||||||||||    
T  31817174 aatgaaataatcattggatataacgtttttactaaacttcccttactttataagaaaaaatacaaaattaaagttgcattgaaaattgtgtgagagaaaa 31817273  T
Q  317 gtt 319  Q
    |||    
T  31817274 gtt 31817276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 56065680 - 56065554
Alignment:
Q  1 gtaaggctgctgcctccccctccaaaactgtcatattaacccgctgccatttcatttgagcccgaaaaaattgcctagagaagtctctaacacaacacgc 100  Q
    |||||||  ||||||||||||||||||||||||||||  | || || |||||| ||||||||||||  ||||||| |  | ||||||||| |||||||||    
T  56065680 gtaaggcaactgcctccccctccaaaactgtcatatttgctcgttgtcatttcgtttgagcccgaatgaattgcccacgggagtctctaaaacaacacgc 56065581  T
Q  101 aaaagatataatatggttacggtcatg 127  Q
     |||||| ||||||| | |||||||||    
T  56065580 gaaagatgtaatatgttgacggtcatg 56065554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 208 - 344
Target Start/End: Original strand, 38761791 - 38761925
Alignment:
Q  208 taaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgt 307  Q
    |||| |||| ||| ||||||| | || |||||| ||||||||||||   |||||||||||| ||| ||||||| |||||||||| | |||||||||  ||    
T  38761791 taagaaatagaattaaataattaatagacataacacttttactaaatcacccttactttattagagaaagacacacttaaagttaccttgaaaatt--gt 38761888  T
Q  308 gagagaaaagttatagtatttattaagggtaaagttg 344  Q
    ||||||||||||  |||||||||| ||| ||||||||    
T  38761889 gagagaaaagttggagtatttattgaggttaaagttg 38761925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 158 - 290
Target Start/End: Original strand, 51737237 - 51737367
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgc 257  Q
    |||||| ||| ||| ||||| ||| ||| ||||  ||| || ||||| | ||||||||| ||||||||||| |||| |||||| |||||||||||| | |    
T  51737237 tactccctccattttaaaatgagtgtcgctttagtcaactgtacacaaattaaggaatagaatgaaataataattagacataacacttttactaaattac 51737336  T
Q  258 ccttactttataagaaaaagacaaacttaaagt 290  Q
    |||||||||||  ||||||||||||||||||||    
T  51737337 ccttactttat--gaaaaagacaaacttaaagt 51737367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 158 - 348
Target Start/End: Complemental strand, 55126736 - 55126544
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgc 257  Q
    |||||||||||||| ||||| | | |||||||| |||||||||||  || |||||||| |||| || || |||     ||||  | |||||||||| |      
T  55126736 tactccatccgttttaaaatgaatgtcgttttagccaattgcacattgattaaggaatgaaataaagtagtcaaatgtcatagcaattttactaaaataa 55126637  T
Q  258 ccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgt--gagagaaaagttatagtatttattaagggtaaagttggaag 348  Q
    |||||||||||||||| ||||||||||||||||||||  |||||||  ||  ||||||||||||| ||||||| || |||||| |||| ||||    
T  55126636 ccttactttataagaataagacaaacttaaagttgcaaggaaaattgtgtaggagagaaaagttagagtatttttttagggtagagttagaag 55126544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 51259681 - 51259804
Alignment:
Q  16 ccccctccaaaactgtcatattaacccgctgccatttcatttgagcccgaaaaaattgccta-gagaagtctctaacacaacacgcaaaagatataatat 114  Q
    ||||||||||||||||||||||  | || ||||||||| ||||||||||||  ||||||| | ||| ||||||||||||||||  | |||||| ||||||    
T  51259681 ccccctccaaaactgtcatatttgctcgttgccatttcgtttgagcccgaatgaattgcccacgag-agtctctaacacaacatacgaaagatgtaatat 51259779  T
Q  115 ggttacggtcatggaacgcggcatc 139  Q
    | | ||||||||| |||||||||||    
T  51259780 gttgacggtcatgaaacgcggcatc 51259804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 28426234 - 28426109
Alignment:
Q  1 gtaaggctgctgcctccccctccaaaactgtcatattaacccgctgccatttcatttgagcccgaaaaaattgcctagagaagtctctaacacaacacgc 100  Q
    |||||||| ||||||||||||||||||| ||||||||  || | ||||||||| ||||||||||||  |||             |||||||||||||| |    
T  28426234 gtaaggctactgcctccccctccaaaacagtcatatttgcctgttgccatttcgtttgagcccgaaggaat-------------ctctaacacaacacac 28426148  T
Q  101 aaaagatataatatggttacggtcatggaacgcggcatc 139  Q
    ||||||| ||| |||||||||||||||||||||||||||    
T  28426147 aaaagatgtaagatggttacggtcatggaacgcggcatc 28426109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 49119536 - 49119661
Alignment:
Q  1 gtaaggctgctgcctccccctccaaaactgtcatattaacccgctgccatttcatttgagcccgaaaaaattgcctagagaagtctctaacacaacacgc 100  Q
    |||||||| ||||||||||||||||||| ||||||||  || | ||||||||| ||||||||||||  |||             |||||||||||||| |    
T  49119536 gtaaggctactgcctccccctccaaaacagtcatatttgcctgttgccatttcgtttgagcccgaaggaat-------------ctctaacacaacacac 49119622  T
Q  101 aaaagatataatatggttacggtcatggaacgcggcatc 139  Q
    ||||||| ||| |||||||||||||||||||||||||||    
T  49119623 aaaagatgtaagatggttacggtcatggaacgcggcatc 49119661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 259 - 313
Target Start/End: Complemental strand, 54233954 - 54233900
Alignment:
Q  259 cttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagaga 313  Q
    |||||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  54233954 cttactttataagaaaaagacaaacttaaagttgcattgaaaattgtgtgagaga 54233900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 199 - 344
Target Start/End: Original strand, 17317803 - 17317943
Alignment:
Q  199 cacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattga 298  Q
    |||||||| |||  |||||||| |||||||||||| ||||    ||||||||||||| | ||||||||||||||||| |||||| |     |||||||||    
T  17317803 cacacagattaaaaaataaaataaaataatcattagacattgctcttttactaaactacgcttactttataagaaaaggacaaatt-----ttgcattga 17317897  T
Q  299 aaattccgtgagagaaaagttatagtatttattaagggtaaagttg 344  Q
    |||||  |||||| |||||||  |||||||||| | ||||||||||    
T  17317898 aaattgtgtgagataaaagtttgagtatttattgaaggtaaagttg 17317943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 199 - 300
Target Start/End: Original strand, 56422955 - 56423056
Alignment:
Q  199 cacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattga 298  Q
    |||||||| |||| |||  |||||||||||||||  | ||||  |||||||||||||| | |||||||||||||||||||| || ||||| |||||||||    
T  56422955 cacacagattaagaaatcgaatgaaataatcattggatataacgcttttactaaactgtctttactttataagaaaaagacgaaattaaaattgcattga 56423054  T
Q  299 aa 300  Q
    ||    
T  56423055 aa 56423056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 244 - 348
Target Start/End: Original strand, 4408176 - 4408282
Alignment:
Q  244 ttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgt--gagagaaaagttatagtatttattaagggtaaag 341  Q
    |||||||||| |  ||||||| ||||||||||||||||||||||| ||||||||||||||  ||  ||||||||||||  || ||||||| ||| |||||    
T  4408176 ttttactaaaataaccttactatataagaaaaagacaaacttaaaattgcattgaaaattgtgtgagagagaaaagtttgagcatttattgaggttaaag 4408275  T
Q  342 ttggaag 348  Q
    | |||||    
T  4408276 tcggaag 4408282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 208 - 314
Target Start/End: Complemental strand, 11835291 - 11835186
Alignment:
Q  208 taaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgt 307  Q
    |||| ||| |||||||||||| ||||  ||||| ||||||| |||||| ||  || |||||||||||| || ||||||||||||||||||||||||  ||    
T  11835291 taagaaatgaaatgaaataattattaggcataacacttttattaaactacctatagtttataagaaaa-gataaacttaaagttgcattgaaaattgtgt 11835193  T
Q  308 gagagaa 314  Q
    |||||||    
T  11835192 gagagaa 11835186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 185 - 319
Target Start/End: Complemental strand, 38692591 - 38692466
Alignment:
Q  185 gttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaact 284  Q
    |||||| ||||||||| | | | |||||||| ||||||||||||||| ||| |||| |||||||||||| | |||         |||||||||||||| |    
T  38692591 gttttagccaattgcatataaattaaggaatgaaatgaaataatcatcaaagataacacttttactaaaataccc---------aagaaaaagacaaaat 38692501  T
Q  285 taaagttgcattgaaaattccgtgagagaaaagtt 319  Q
    |||||||||||||||||||  | ||||||||||||    
T  38692500 taaagttgcattgaaaattgtgcgagagaaaagtt 38692466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 222 - 331
Target Start/End: Complemental strand, 3093521 - 3093413
Alignment:
Q  222 aaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagttat 321  Q
    |||||||||||| |||||| ||||| | |||| || |||| |||||||||||||| | ||| |||||||||||| | |||||  ||||||||||||||      
T  3093521 aaataatcattagacataacactttcattaaattgtccttcctttataagaaaaa-agaaatttaaagttgcatcggaaattgtgtgagagaaaagttga 3093423  T
Q  322 agtatttatt 331  Q
    ||||||||||    
T  3093422 agtatttatt 3093413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 260 - 344
Target Start/End: Complemental strand, 6510253 - 6510169
Alignment:
Q  260 ttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagttatagtatttattaagggtaaagttg 344  Q
    ||||||||||| ||||||||||||||||| || |||| ||||||  || ||||||||| |  |||||||||| ||||||||||||    
T  6510253 ttactttataataaaaagacaaacttaaaattacattaaaaattgtgtaagagaaaaggtggagtatttattgagggtaaagttg 6510169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 218 - 319
Target Start/End: Complemental strand, 50072428 - 50072333
Alignment:
Q  218 aatgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaag 317  Q
    |||||||||||||||  | ||||   |||||||||||||||||||||||||      |||||||| ||||||||||||||||||||  |||||| |||||    
T  50072428 aatgaaataatcattggatataacgtttttactaaactgcccttactttat------aagacaaaattaaagttgcattgaaaattgtgtgagaaaaaag 50072335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 158 - 299
Target Start/End: Complemental strand, 6462253 - 6462112
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgc 257  Q
    |||||||||||||||||||| ||  |||||||| ||||||||||||||| |||| ||   ||| || || |||     ||||  | ||| |||||| |      
T  6462253 tactccatccgtttcaaaatgagggtcgttttagccaattgcacacagattaagaaaagtaataaagtagtcaaatttcatagcaatttgactaaaataa 6462154  T
Q  258 ccttactttataagaaaaagacaaacttaaagttgcattgaa 299  Q
    |||||||||||||||| || ||||||||||||||||||||||    
T  6462153 ccttactttataagaacaaaacaaacttaaagttgcattgaa 6462112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 158 - 348
Target Start/End: Original strand, 19282323 - 19282514
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgc 257  Q
    ||||| |||||||| ||||| ||  ||| |||| |||||||||||| || ||||||||  ||| || || |||     ||||| | |||||||||| |      
T  19282323 tactcgatccgttttaaaatgagcgtcgctttagccaattgcacacggattaaggaatggaataaagtagtcaaatgtcataacaattttactaaaataa 19282422  T
Q  258 ccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgaga--gaaaagttatagtatttattaagggtaaagttggaag 348  Q
    ||||||||||||| || |||||||||||||| ||| |||  |||||  ||||||  ||||||||| |||||||||| | ||||||||||||||    
T  19282423 ccttactttataa-aacaagacaaacttaaaattgtattagaaattgtgtgagagagaaaagttagagtatttattgaaggtaaagttggaag 19282514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 479 - 520
Target Start/End: Original strand, 30106198 - 30106239
Alignment:
Q  479 aaaagctattcctaatagcttttcattttagagtcaaaatag 520  Q
    |||||||| |||||||||||||||||||||||||||||||||    
T  30106198 aaaagctaatcctaatagcttttcattttagagtcaaaatag 30106239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 159 - 220
Target Start/End: Original strand, 49080394 - 49080455
Alignment:
Q  159 actccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaat 220  Q
    ||||| ||||||||||||||||| ||| |||| ||||||||||||| | |||||||||||||    
T  49080394 actccctccgtttcaaaataagtgtcgctttatccaattgcacacatattaaggaataaaat 49080455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 303
Target Start/End: Complemental strand, 45049910 - 45049801
Alignment:
Q  184 cgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaac 283  Q
    |||||||  |||||||||| | | |||||||| ||||||||||||||||| |||||| |||||| |||| ||||||          | ||||| ||||||    
T  45049910 cgttttaatcaattgcacataaattaaggaatgaaatgaaataatcattagacataacacttttcctaagctgccc----------aaaaaaatacaaac 45049821  T
Q  284 ttaaagttgcattgaaaatt 303  Q
    ||||||||||||||||||||    
T  45049820 ttaaagttgcattgaaaatt 45049801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 157 - 220
Target Start/End: Complemental strand, 2493344 - 2493281
Alignment:
Q  157 ttactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaat 220  Q
    ||||||||||||||||||||| ||| |||||||  ||||||||||||| | |||||||| ||||    
T  2493344 ttactccatccgtttcaaaatgagtgtcgtttttgccaattgcacacatattaaggaatgaaat 2493281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 37654651 - 37654589
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaat 220  Q
    |||||| ||||||||||||| ||| |||||||| ||||||||||||| | |||||||| ||||    
T  37654651 tactccctccgtttcaaaatgagtgtcgttttagccaattgcacacatattaaggaatgaaat 37654589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 470 - 520
Target Start/End: Complemental strand, 54178449 - 54178399
Alignment:
Q  470 gattttggaaaaagctattcctaatagcttttcattttagagtcaaaatag 520  Q
    ||||||| ||||||||| |||| |||||||||||||||||||| |||||||    
T  54178449 gattttgaaaaaagctaatccttatagcttttcattttagagtgaaaatag 54178399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 215
Target Start/End: Original strand, 2728314 - 2728371
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaat 215  Q
    |||||||||||||||||||| ||| ||| |||| ||||||||||||| | ||||||||    
T  2728314 tactccatccgtttcaaaatgagtgtcgctttagccaattgcacacatattaaggaat 2728371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 468 - 520
Target Start/End: Complemental strand, 16590391 - 16590339
Alignment:
Q  468 tggattttggaaaaagctattcctaatagcttttcattttagagtcaaaatag 520  Q
    |||||||||  ||||| || ||||||||||||||||||||| |||||||||||    
T  16590391 tggattttgataaaagttaatcctaatagcttttcattttaaagtcaaaatag 16590339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 264 - 303
Target Start/End: Original strand, 34534111 - 34534151
Alignment:
Q  264 tttataagaaaaagacaaactt-aaagttgcattgaaaatt 303  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  34534111 tttataagaaaaagacaaacttaaaagttgcattgaaaatt 34534151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 410 - 445
Target Start/End: Complemental strand, 52253834 - 52253799
Alignment:
Q  410 ggctaaaatgacattcattttgaaacggagggagta 445  Q
    |||||||| |||||||||||||||||||||||||||    
T  52253834 ggctaaaacgacattcattttgaaacggagggagta 52253799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 470 - 520
Target Start/End: Original strand, 22523424 - 22523474
Alignment:
Q  470 gattttggaaaaagctattcctaatagcttttcattttagagtcaaaatag 520  Q
    |||||||  |||||||| ||| |||||||||||||||||| ||||||||||    
T  22523424 gattttgagaaaagctaatccaaatagcttttcattttagggtcaaaatag 22523474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 470 - 516
Target Start/End: Original strand, 42932359 - 42932405
Alignment:
Q  470 gattttggaaaaagctattcctaatagcttttcattttagagtcaaa 516  Q
    |||||||| |||||||| ||||||||||  |||||||||||||||||    
T  42932359 gattttgggaaaagctaatcctaatagccattcattttagagtcaaa 42932405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 215
Target Start/End: Original strand, 52957713 - 52957763
Alignment:
Q  165 tccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaat 215  Q
    ||||||||||||| ||| ||| |||| ||||||||||||||| ||||||||    
T  52957713 tccgtttcaaaatgagtgtcgctttagccaattgcacacagattaaggaat 52957763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 53814413 - 53814475
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaat 220  Q
    |||||||||||||| ||||| ||| |||||||| ||||| ||||||| | |||||||| ||||    
T  53814413 tactccatccgttttaaaatgagtgtcgttttaaccaatcgcacacatattaaggaatgaaat 53814475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 204
Target Start/End: Original strand, 54042098 - 54042144
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacaca 204  Q
    |||||||||||||| ||||| ||| |||||||| |||||||||||||    
T  54042098 tactccatccgttttaaaatgagtgtcgttttagccaattgcacaca 54042144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 479 - 520
Target Start/End: Original strand, 9392614 - 9392655
Alignment:
Q  479 aaaagctattcctaatagcttttcattttagagtcaaaatag 520  Q
    |||||||| |||||||||||||||||||||  ||||||||||    
T  9392614 aaaagctaatcctaatagcttttcattttaatgtcaaaatag 9392655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 479 - 520
Target Start/End: Complemental strand, 21295054 - 21295013
Alignment:
Q  479 aaaagctattcctaatagcttttcattttagagtcaaaatag 520  Q
    ||||| || |||||||||||||||||||||| ||||||||||    
T  21295054 aaaagttaatcctaatagcttttcattttagggtcaaaatag 21295013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 479 - 520
Target Start/End: Original strand, 33634713 - 33634754
Alignment:
Q  479 aaaagctattcctaatagcttttcattttagagtcaaaatag 520  Q
    |||||||| ||||||||||||||||||||||  |||||||||    
T  33634713 aaaagctaatcctaatagcttttcattttaggatcaaaatag 33634754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 226
Target Start/End: Complemental strand, 34316454 - 34316393
Alignment:
Q  165 tccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaata 226  Q
    ||||||||||||| ||| ||  |||| ||||||||||||||| |||||||| |||| |||||    
T  34316454 tccgtttcaaaatgagtgtcactttaaccaattgcacacagattaaggaatgaaataaaata 34316393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 471 - 520
Target Start/End: Original strand, 42890351 - 42890400
Alignment:
Q  471 attttggaaaaagctattcctaatagcttttcattttagagtcaaaatag 520  Q
    ||||||| |||||||| ||| ||| | |||||||||||||||||||||||    
T  42890351 attttgggaaaagctaatcccaatcgattttcattttagagtcaaaatag 42890400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 479 - 520
Target Start/End: Original strand, 53258740 - 53258781
Alignment:
Q  479 aaaagctattcctaatagcttttcattttagagtcaaaatag 520  Q
    |||||||| |||||||||||||||||||||| || |||||||    
T  53258740 aaaagctaatcctaatagcttttcattttagggttaaaatag 53258781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 65; Significance: 4e-28; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 198 - 346
Target Start/End: Complemental strand, 1743 - 1595
Alignment:
Q  198 gcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattg 297  Q
    ||||| ||| |||| |||| ||||||||||| |||  | ||||   |||||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  1743 gcacaaagattaagaaatataatgaaataattattggatataacgtttttactaaattgcccttactttataagaaaaagacaaaattaaagttgcattg 1644  T
Q  298 aaaattccgtgagagaaaagttatagtatttattaagggtaaagttgga 346  Q
    ||||||  ||||||||||||||  ||  |||||| ||| ||||||||||    
T  1643 aaaattatgtgagagaaaagttggagattttattgaggataaagttgga 1595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 64; Significance: 2e-27; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 217 - 348
Target Start/End: Original strand, 16011 - 16141
Alignment:
Q  217 aaatgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaa 316  Q
    ||||||||||||||||| | |||| | |||||||||||| || ||||||||||| |||| |||||||||||||||||||||||||||  ||||||||||     
T  16011 aaatgaaataatcattatatataacatttttactaaactacctttactttataa-aaaatgacaaacttaaagttgcattgaaaattgtgtgagagaaag 16109  T
Q  317 gttatagtatttattaagggtaaagttggaag 348  Q
    |||  | |||||||| ||||||||||| ||||    
T  16110 gttggaatatttattgagggtaaagtttgaag 16141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0886 (Bit Score: 60; Significance: 4e-25; HSPs: 1)
Name: scaffold0886
Description:

Target: scaffold0886; HSP #1
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 218 - 348
Target Start/End: Original strand, 4080 - 4211
Alignment:
Q  218 aatgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaa-gacaaacttaaagttgcattgaaaattccgtgagagaaaa 316  Q
    ||||||| |||||||| |||||| | |||||| ||| || ||||||||||||| ||||| |||||||||||||||  ||||||||||  |||||||||||    
T  4080 aatgaaacaatcattatacataacatttttacgaaattgtccttactttataaaaaaaatgacaaacttaaagtttgattgaaaattatgtgagagaaaa 4179  T
Q  317 gttatagtatttattaagggtaaagttggaag 348  Q
    |||  |||||||||| ||| ||||||||||||    
T  4180 gttggagtatttattgaggataaagttggaag 4211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 157 - 344
Target Start/End: Complemental strand, 158330 - 158154
Alignment:
Q  157 ttactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactg 256  Q
    ||||| ||||||||| ||||| ||| |||||||| ||||||| ||||| | ||| |||| |||| ||||||| |||||| |||| |||||| |||||  |    
T  158330 ttacttcatccgttttaaaatgagtgtcgttttagccaattg-acacaaattaaagaatgaaataaaataattattaaagataacacttttcctaaaagg 158232  T
Q  257 cccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgagagaaaagttatagtatttattaagggtaaagttg 344  Q
     |          |||||||||||||||||||||||||||||||||||  | |||||||||||| ||||||||||| ||||||||||||    
T  158231 tc----------aagaaaaagacaaacttaaagttgcattgaaaattatgcgagagaaaagttgtagtatttattgagggtaaagttg 158154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 56; Significance: 9e-23; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 194 - 345
Target Start/End: Original strand, 13016 - 13158
Alignment:
Q  194 aattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgcccttactttataagaaaaagacaaacttaaagttgc 293  Q
    ||||||||||||| |||||||| ||||||||||||||||| |||||| |||||||||||| |||          ||||||||||||||| |||||||| |    
T  13016 aattgcacacagattaaggaatgaaatgaaataatcattagacataacacttttactaaaatgc---------ttaagaaaaagacaaaattaaagttac 13106  T
Q  294 attgaaaattccgtgagagaaaagttatagtatttattaagggtaaagttgg 345  Q
    ||||||||||  |   ||||||||||  |||||||||| |||||||||||||    
T  13107 attgaaaattgtgccggagaaaagttgaagtatttattgagggtaaagttgg 13158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 56; Significance: 9e-23; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 244 - 348
Target Start/End: Original strand, 70451 - 70557
Alignment:
Q  244 ttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgt--gagagaaaagttatagtatttattaagggtaaag 341  Q
    |||||||||| |  ||||||||||||||||||| ||||||||||||||| ||||||||||  ||  ||||||||||||  |||||||||| |||||||||    
T  70451 ttttactaaaataaccttactttataagaaaaatacaaacttaaagttgtattgaaaattgtgtgagagagaaaagttggagtatttattgagggtaaag 70550  T
Q  342 ttggaag 348  Q
    |||||||    
T  70551 ttggaag 70557  T

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Target: scaffold0580 (Bit Score: 49; Significance: 1e-18; HSPs: 2)
Name: scaffold0580
Description:

Target: scaffold0580; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 158 - 282
Target Start/End: Complemental strand, 1814 - 1690
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgc 257  Q
    |||||| ||||||||||||| ||| ||| ||||  |  | ||||| ||| |||| ||| ||||||||||||||||  | |||| | |||||||||||||     
T  1814 tactccctccgtttcaaaatgagtgtcgctttagacgttggcacatagattaagaaatgaaatgaaataatcattggatataacatttttactaaactga 1715  T
Q  258 ccttactttataagaaaaagacaaa 282  Q
    |||||||||||||||||||||||||    
T  1714 ccttactttataagaaaaagacaaa 1690  T

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Target: scaffold0580; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 158 - 282
Target Start/End: Complemental strand, 9553 - 9429
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactgc 257  Q
    |||||| ||||||||||||| ||| ||| ||||  |  | ||||| ||| |||| ||| ||||||||||||||||  | |||| | |||||||||||||     
T  9553 tactccctccgtttcaaaatgagtgtcgctttagacgttggcacatagattaagaaatgaaatgaaataatcattggatataacatttttactaaactga 9454  T
Q  258 ccttactttataagaaaaagacaaa 282  Q
    |||||||||||||||||||||||||    
T  9453 ccttactttataagaaaaagacaaa 9429  T

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Target: scaffold0003 (Bit Score: 48; Significance: 5e-18; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 244 - 348
Target Start/End: Complemental strand, 321882 - 321776
Alignment:
Q  244 ttttactaaactgcccttactttataagaaaaagacaaacttaaagttgcattgaaaattccgtgaga--gaaaagttatagtatttattaagggtaaag 341  Q
    |||||||||| |  |||||||||||| ||| |||||||||||||| ||||||||||||||  ||||||  ||||||||  |||| ||||| |||||||||    
T  321882 ttttactaaaataaccttactttataggaacaagacaaacttaaaattgcattgaaaattgtgtgagagcgaaaagtttgagtaattattgagggtaaag 321783  T
Q  342 ttggaag 348  Q
    |||||||    
T  321782 ttggaag 321776  T

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Target: scaffold0060 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 165 - 256
Target Start/End: Complemental strand, 31777 - 31686
Alignment:
Q  165 tccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaataatcattaaacataaaacttttactaaactg 256  Q
    ||||||||||||| ||| | ||| || ||||||||||||| | ||| |||| ||||||||||||||||| | |||| |||||||||||||||    
T  31777 tccgtttcaaaatgagtgttgttgtagccaattgcacacaaattaacgaatgaaatgaaataatcattagagataacacttttactaaactg 31686  T

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Target: scaffold0519 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 278 - 348
Target Start/End: Original strand, 7732 - 7802
Alignment:
Q  278 acaaacttaaagttgcattgaaaattccgtgagagaaaagttatagtatttattaagggtaaagttggaag 348  Q
    ||||||||||||||||||||||||||  ||||||||||||||  |||||||||| ||  ||||||||||||    
T  7732 acaaacttaaagttgcattgaaaattgtgtgagagaaaagttgaagtatttattgagattaaagttggaag 7802  T

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Target: scaffold0446 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0446
Description:

Target: scaffold0446; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 237 - 111
Alignment:
Q  1 gtaaggctgctgcctccccctccaaaactgtcatattaacccgctgccatttcatttgagcccgaaaaaattgcctagagaagtctctaacacaacacgc 100  Q
    |||||||  |||||||||||||| |||||||||||||  | || || |||||| ||||||||||||  ||||||| |  | ||||||||| |||||||||    
T  237 gtaaggcaactgcctccccctcccaaactgtcatatttgctcgttgtcatttcgtttgagcccgaatgaattgcccacgggagtctctaaaacaacacgc 138  T
Q  101 aaaagatataatatggttacggtcatg 127  Q
     ||||||   ||||| | |||||||||    
T  137 gaaagatngtatatgttgacggtcatg 111  T

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Target: scaffold0015 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 226
Target Start/End: Original strand, 20993 - 21061
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaataaaatgaaata 226  Q
    |||||| ||||||| ||||| ||| ||| |||| ||||||||||| ||| ||||||||||||| |||||    
T  20993 tactccctccgttttaaaattagtgtcgctttagccaattgcacatagattaaggaataaaataaaata 21061  T

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Target: scaffold0571 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0571
Description:

Target: scaffold0571; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 478 - 519
Target Start/End: Complemental strand, 9352 - 9311
Alignment:
Q  478 aaaaagctattcctaatagcttttcattttagagtcaaaata 519  Q
    ||||||||| ||||||||||||||||||||||  ||||||||    
T  9352 aaaaagctaatcctaatagcttttcattttaggatcaaaata 9311  T

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Target: scaffold0565 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 215
Target Start/End: Original strand, 9572 - 9629
Alignment:
Q  158 tactccatccgtttcaaaataagtatcgttttacccaattgcacacagaataaggaat 215  Q
    |||||| ||||||||||||| ||| |||||||| |||||| |||||| | ||||||||    
T  9572 tactccctccgtttcaaaatgagtgtcgttttagccaattacacacatattaaggaat 9629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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