View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20209_low_23 (Length: 214)

Name: NF20209_low_23
Description: NF20209
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20209_low_23
NF20209_low_23
[»] chr7 (36 HSPs)
chr7 (18-199)||(1350235-1350417)
chr7 (97-199)||(1373533-1373635)
chr7 (109-199)||(1358182-1358280)
chr7 (55-164)||(27378856-27378965)
chr7 (92-164)||(17989051-17989123)
chr7 (98-164)||(36370645-36370711)
chr7 (97-198)||(44151476-44151575)
chr7 (92-164)||(12110330-12110402)
chr7 (92-164)||(30456478-30456550)
chr7 (104-150)||(1413120-1413166)
chr7 (53-164)||(47941250-47941365)
chr7 (97-146)||(5369737-5369786)
chr7 (54-158)||(44917570-44917675)
chr7 (115-164)||(46104595-46104644)
chr7 (92-164)||(7623108-7623180)
chr7 (109-157)||(25296971-25297019)
chr7 (98-158)||(28340878-28340938)
chr7 (92-164)||(29363488-29363560)
chr7 (92-164)||(31338478-31338550)
chr7 (92-164)||(38010684-38010756)
chr7 (92-164)||(40689014-40689086)
chr7 (92-156)||(44910574-44910638)
chr7 (109-164)||(4966143-4966198)
chr7 (97-164)||(10190770-10190837)
chr7 (69-139)||(47004033-47004104)
chr7 (53-158)||(3610774-3610880)
chr7 (97-139)||(9527143-9527185)
chr7 (92-158)||(23918927-23918993)
chr7 (90-164)||(47177604-47177678)
chr7 (97-158)||(3559010-3559071)
chr7 (123-164)||(12792591-12792632)
chr7 (98-159)||(39169449-39169509)
chr7 (53-86)||(47559715-47559748)
chr7 (53-116)||(7244632-7244696)
chr7 (109-161)||(18350738-18350790)
chr7 (60-158)||(36484069-36484169)
[»] chr5 (36 HSPs)
chr5 (55-197)||(17258880-17259021)
chr5 (109-197)||(32408589-32408675)
chr5 (109-161)||(2569726-2569778)
chr5 (92-156)||(14295476-14295540)
chr5 (53-139)||(32059642-32059728)
chr5 (59-151)||(26209454-26209546)
chr5 (109-164)||(13604877-13604932)
chr5 (53-164)||(33234292-33234403)
chr5 (92-159)||(38047888-38047955)
chr5 (122-164)||(3237093-3237135)
chr5 (54-139)||(10907310-10907396)
chr5 (97-162)||(18543226-18543292)
chr5 (55-139)||(18857453-18857538)
chr5 (109-197)||(21768194-21768280)
chr5 (109-197)||(41957448-41957534)
chr5 (92-164)||(9202776-9202848)
chr5 (97-129)||(13193774-13193806)
chr5 (109-157)||(16945018-16945066)
chr5 (121-165)||(29201532-29201576)
chr5 (92-159)||(12975317-12975384)
chr5 (117-164)||(30217077-30217124)
chr5 (53-127)||(35135727-35135802)
chr5 (97-159)||(8985636-8985698)
chr5 (92-197)||(28586763-28586866)
chr5 (110-164)||(29054896-29054950)
chr5 (122-164)||(32197720-32197762)
chr5 (128-197)||(36639528-36639595)
chr5 (110-147)||(18286779-18286816)
chr5 (109-150)||(36181219-36181260)
chr5 (122-163)||(41929729-41929770)
chr5 (108-164)||(2568644-2568700)
chr5 (92-164)||(3970708-3970780)
chr5 (98-197)||(10272428-10272525)
chr5 (92-164)||(12425541-12425613)
chr5 (92-156)||(36539716-36539780)
chr5 (92-164)||(41016149-41016221)
[»] scaffold0024 (1 HSPs)
scaffold0024 (55-145)||(27508-27599)
[»] chr3 (38 HSPs)
chr3 (68-159)||(24887316-24887408)
chr3 (54-164)||(36101499-36101610)
chr3 (103-196)||(20502066-20502157)
chr3 (53-197)||(27290898-27291039)
chr3 (92-164)||(25453887-25453959)
chr3 (109-197)||(33405163-33405250)
chr3 (53-164)||(24158531-24158642)
chr3 (55-134)||(20192664-20192744)
chr3 (68-197)||(3044256-3044384)
chr3 (54-164)||(36139809-36139920)
chr3 (53-158)||(27792802-27792908)
chr3 (92-159)||(33965522-33965591)
chr3 (92-137)||(2201098-2201143)
chr3 (109-157)||(20874339-20874387)
chr3 (53-164)||(22232756-22232868)
chr3 (98-158)||(43875624-43875684)
chr3 (109-157)||(47904098-47904146)
chr3 (109-164)||(52618990-52619045)
chr3 (54-139)||(33674710-33674792)
chr3 (92-146)||(38462251-38462305)
chr3 (109-197)||(1217797-1217883)
chr3 (56-140)||(1395604-1395689)
chr3 (92-145)||(19679375-19679428)
chr3 (115-164)||(22203423-22203472)
chr3 (103-164)||(22343589-22343650)
chr3 (92-157)||(28306128-28306193)
chr3 (56-164)||(54775061-54775169)
chr3 (92-164)||(1816553-1816625)
chr3 (124-164)||(2071058-2071098)
chr3 (92-164)||(2197806-2197878)
chr3 (97-145)||(19679807-19679855)
chr3 (92-164)||(21367637-21367709)
chr3 (100-148)||(21872315-21872363)
chr3 (92-164)||(23315596-23315668)
chr3 (92-164)||(24785175-24785247)
chr3 (92-164)||(32064410-32064481)
chr3 (91-147)||(42753575-42753631)
chr3 (109-165)||(52440689-52440745)
[»] chr1 (48 HSPs)
chr1 (97-195)||(6231815-6231912)
chr1 (54-161)||(33527178-33527286)
chr1 (53-157)||(17269180-17269285)
chr1 (92-164)||(7218102-7218174)
chr1 (68-164)||(44422646-44422741)
chr1 (62-155)||(48830113-48830207)
chr1 (99-164)||(4078177-4078242)
chr1 (92-153)||(37272625-37272686)
chr1 (53-164)||(10854663-10854775)
chr1 (92-198)||(30257653-30257757)
chr1 (101-156)||(47960660-47960715)
chr1 (109-163)||(25005826-25005880)
chr1 (92-197)||(27887115-27887218)
chr1 (100-153)||(4363671-4363724)
chr1 (101-197)||(4622072-4622166)
chr1 (115-164)||(4700094-4700143)
chr1 (115-164)||(7137026-7137075)
chr1 (115-164)||(7472304-7472353)
chr1 (68-164)||(10199436-10199533)
chr1 (115-164)||(34290229-34290278)
chr1 (92-144)||(10581125-10581177)
chr1 (92-164)||(34179900-34179972)
chr1 (68-139)||(49517015-49517087)
chr1 (53-163)||(7273968-7274079)
chr1 (97-164)||(24913438-24913505)
chr1 (109-164)||(35017563-35017618)
chr1 (102-164)||(3924604-3924666)
chr1 (97-139)||(15361688-15361730)
chr1 (92-158)||(25006068-25006134)
chr1 (56-164)||(30259514-30259624)
chr1 (110-164)||(31517768-31517822)
chr1 (97-158)||(4549576-4549637)
chr1 (97-197)||(6292468-6292566)
chr1 (99-164)||(16322826-16322891)
chr1 (111-164)||(25479570-25479623)
chr1 (69-137)||(29007771-29007840)
chr1 (73-197)||(29723440-29723562)
chr1 (92-165)||(44032026-44032099)
chr1 (53-165)||(4019620-4019731)
chr1 (112-164)||(5592713-5592765)
chr1 (97-157)||(6074449-6074509)
chr1 (97-145)||(8130411-8130459)
chr1 (92-148)||(9656620-9656676)
chr1 (56-127)||(15360827-15360899)
chr1 (54-86)||(37818395-37818427)
chr1 (112-164)||(39347995-39348047)
chr1 (124-164)||(43332486-43332526)
chr1 (53-164)||(52286608-52286720)
[»] chr6 (32 HSPs)
chr6 (54-164)||(4006645-4006756)
chr6 (92-158)||(2117373-2117439)
chr6 (92-164)||(1497951-1498023)
chr6 (98-197)||(3528779-3528876)
chr6 (92-164)||(31671102-31671174)
chr6 (109-195)||(4246397-4246481)
chr6 (113-164)||(33911310-33911361)
chr6 (131-165)||(29837111-29837145)
chr6 (103-202)||(31324437-31324534)
chr6 (109-164)||(1275136-1275191)
chr6 (92-139)||(2027459-2027506)
chr6 (92-155)||(3155146-3155209)
chr6 (97-164)||(13907822-13907889)
chr6 (97-164)||(18264304-18264371)
chr6 (112-158)||(7149507-7149553)
chr6 (109-151)||(10860958-10861000)
chr6 (92-197)||(27894017-27894119)
chr6 (94-163)||(2167989-2168058)
chr6 (94-163)||(2179622-2179691)
chr6 (115-164)||(2735062-2735111)
chr6 (56-164)||(5328907-5329015)
chr6 (97-138)||(5550107-5550148)
chr6 (109-158)||(24838777-24838826)
chr6 (59-139)||(29274282-29274363)
chr6 (64-164)||(33887771-33887872)
chr6 (92-164)||(281876-281948)
chr6 (115-159)||(1401102-1401146)
chr6 (53-164)||(8420225-8420337)
chr6 (92-164)||(10400239-10400311)
chr6 (98-197)||(10616538-10616635)
chr6 (113-161)||(13907409-13907457)
chr6 (92-164)||(33787773-33787845)
[»] chr2 (50 HSPs)
chr2 (53-159)||(28803539-28803646)
chr2 (92-197)||(33256710-33256813)
chr2 (54-159)||(10143103-10143209)
chr2 (53-164)||(3235412-3235522)
chr2 (53-148)||(17952745-17952841)
chr2 (109-164)||(9395117-9395172)
chr2 (109-164)||(15377752-15377807)
chr2 (109-164)||(39983329-39983384)
chr2 (54-164)||(41817099-41817210)
chr2 (97-164)||(43141846-43141913)
chr2 (122-164)||(4026817-4026859)
chr2 (98-164)||(13736321-13736387)
chr2 (122-164)||(44644278-44644320)
chr2 (101-158)||(6561340-6561397)
chr2 (119-164)||(10884549-10884594)
chr2 (109-158)||(15780064-15780113)
chr2 (76-164)||(36415701-36415790)
chr2 (60-139)||(39621890-39621968)
chr2 (68-197)||(1939329-1939457)
chr2 (53-136)||(11344340-11344424)
chr2 (53-160)||(13630313-13630421)
chr2 (98-150)||(13866865-13866917)
chr2 (92-164)||(22681213-22681285)
chr2 (97-192)||(43205284-43205377)
chr2 (92-139)||(3102663-3102710)
chr2 (97-164)||(16353837-16353903)
chr2 (109-164)||(18066115-18066170)
chr2 (109-164)||(18179268-18179323)
chr2 (109-152)||(25800816-25800859)
chr2 (97-164)||(35486391-35486458)
chr2 (109-164)||(43985031-43985086)
chr2 (98-164)||(1742060-1742126)
chr2 (122-164)||(3049974-3050016)
chr2 (92-162)||(5043590-5043660)
chr2 (53-197)||(9478229-9478372)
chr2 (98-164)||(25790102-25790168)
chr2 (92-197)||(33942120-33942223)
chr2 (92-145)||(11513868-11513921)
chr2 (115-164)||(42419990-42420039)
chr2 (98-159)||(42817409-42817470)
chr2 (92-164)||(8017404-8017476)
chr2 (92-164)||(9556209-9556281)
chr2 (92-164)||(13869123-13869195)
chr2 (96-164)||(26626847-26626915)
chr2 (104-164)||(30552672-30552732)
chr2 (54-157)||(34054936-34055040)
chr2 (92-164)||(35485887-35485959)
chr2 (92-164)||(36863653-36863725)
chr2 (98-154)||(37276722-37276778)
chr2 (92-160)||(37292379-37292447)
[»] chr4 (34 HSPs)
chr4 (97-164)||(21157743-21157810)
chr4 (56-197)||(23819023-23819162)
chr4 (68-164)||(49219084-49219181)
chr4 (53-165)||(44319880-44319992)
chr4 (101-139)||(17883546-17883584)
chr4 (122-164)||(47800623-47800665)
chr4 (122-164)||(56480348-56480390)
chr4 (58-197)||(2996508-2996646)
chr4 (62-158)||(35958594-35958691)
chr4 (121-165)||(12650311-12650355)
chr4 (53-196)||(30207569-30207710)
chr4 (104-164)||(36722697-36722757)
chr4 (121-164)||(1706621-1706664)
chr4 (103-138)||(10365753-10365788)
chr4 (109-164)||(29778782-29778837)
chr4 (115-162)||(35507355-35507402)
chr4 (115-162)||(35507487-35507534)
chr4 (101-164)||(53315305-53315368)
chr4 (92-159)||(54325070-54325137)
chr4 (98-164)||(7694038-7694104)
chr4 (114-164)||(25309233-25309283)
chr4 (54-135)||(42321936-42322018)
chr4 (101-159)||(42866047-42866105)
chr4 (125-185)||(3155606-3155664)
chr4 (53-158)||(3891507-3891611)
chr4 (53-86)||(4663803-4663836)
chr4 (131-164)||(40008546-40008579)
chr4 (98-139)||(41097296-41097337)
chr4 (116-164)||(1137706-1137754)
chr4 (92-156)||(3175921-3175985)
chr4 (122-197)||(11264301-11264374)
chr4 (92-164)||(16200009-16200081)
chr4 (128-164)||(21043263-21043299)
chr4 (92-164)||(24929463-24929535)
[»] chr8 (36 HSPs)
chr8 (68-158)||(6509337-6509426)
chr8 (97-164)||(10075579-10075646)
chr8 (97-164)||(39389204-39389271)
chr8 (54-159)||(4763849-4763955)
chr8 (98-148)||(30013194-30013244)
chr8 (54-164)||(34522082-34522195)
chr8 (97-197)||(11795067-11795165)
chr8 (92-164)||(1470884-1470956)
chr8 (98-197)||(12361168-12361265)
chr8 (123-163)||(25097387-25097427)
chr8 (92-164)||(29973051-29973123)
chr8 (92-164)||(42215334-42215406)
chr8 (109-164)||(5227522-5227577)
chr8 (97-164)||(9836882-9836949)
chr8 (121-164)||(27028830-27028873)
chr8 (97-164)||(31862468-31862535)
chr8 (115-150)||(38537584-38537619)
chr8 (109-164)||(41309772-41309827)
chr8 (55-164)||(4558730-4558840)
chr8 (98-144)||(28769387-28769433)
chr8 (103-157)||(42764248-42764302)
chr8 (97-139)||(43704431-43704473)
chr8 (99-164)||(1433525-1433590)
chr8 (53-157)||(4390143-4390248)
chr8 (111-164)||(9562291-9562344)
chr8 (121-162)||(40014919-40014960)
chr8 (53-86)||(42476035-42476068)
chr8 (132-164)||(1470029-1470061)
chr8 (92-164)||(8062494-8062566)
chr8 (92-164)||(10383855-10383927)
chr8 (92-164)||(11183515-11183587)
chr8 (53-145)||(26717187-26717278)
chr8 (68-139)||(26820144-26820216)
chr8 (110-154)||(30043784-30043828)
chr8 (98-150)||(32143087-32143139)
chr8 (92-164)||(33209248-33209320)
[»] scaffold0352 (1 HSPs)
scaffold0352 (113-164)||(12060-12111)
[»] scaffold0091 (1 HSPs)
scaffold0091 (109-164)||(6939-6994)
[»] scaffold0092 (1 HSPs)
scaffold0092 (121-167)||(40230-40276)
[»] scaffold0254 (1 HSPs)
scaffold0254 (94-163)||(2641-2710)
[»] scaffold0110 (1 HSPs)
scaffold0110 (92-144)||(4271-4323)


Alignment Details
Target: chr7 (Bit Score: 163; Significance: 3e-87; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 18 - 199
Target Start/End: Complemental strand, 1350417 - 1350235
Alignment:
Q  18 gggtcaacaaacttgtgtacttttgccaacaaatctataagtgcttatgaataagttatttctataaca-ttgacaaaagaaagtcaaacttttttcata 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |    
T  1350417 gggtcaacaaacttgtgtacttttgccaacaaatctataagtgcttatgaataagttatttctataacaattgacaaaagaaagtcaaacttttttcaca 1350318  T
Q  117 taatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcataaat 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  1350317 taatctataagctgttttcataaactatcctgaagagcttatgaaaatataagaagaaaacagtttacgggcatgtcataaat 1350235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 97 - 199
Target Start/End: Complemental strand, 1373635 - 1373533
Alignment:
Q  97 aaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcata 196  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||| ||||| |||||||||||| ||||| |||||||||||||||||||||||||    
T  1373635 aaagtcaaacttttttcatatagtctataacctgttttcataaactatcttgaagggcttatgaaaatataagatgaaaacagtttacggacatgtcata 1373536  T
Q  197 aat 199  Q
    |||    
T  1373535 aat 1373533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 109 - 199
Target Start/End: Complemental strand, 1358280 - 1358182
Alignment:
Q  109 ttttcatataatctataagctgttttcataaactatcct--------gaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcataaat 199  Q
    |||||||||||||||||||||||||||||||||||||||        ||||||||||||||||| ||||| ||||||||||||| ||||||||||||||    
T  1358280 ttttcatataatctataagctgttttcataaactatcctactatcctgaagagcttatgaaaatataagatgaaaacagtttacagacatgtcataaat 1358182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 55 - 164
Target Start/End: Complemental strand, 27378965 - 27378856
Alignment:
Q  55 taagtgcttatgaataagttatttctataacattgacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagc 154  Q
    |||||||||||| ||||| ||||||||| |||     |||| |||||  |||| ||||||||||| ||| || ||||||||||||||||||||| |||||    
T  27378965 taagtgcttatgtataagctatttctattacaaaagtaaaataaagtagaactgttttcatataaactacaatctgttttcataaactatcctggagagc 27378866  T
Q  155 ttatgaaaat 164  Q
    ||||||||||    
T  27378865 ttatgaaaat 27378856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 17989123 - 17989051
Alignment:
Q  92 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    |||| ||||||||||| ||||||||||| ||||||  ||||||||||| || |||||||||||||||||||||    
T  17989123 aaaataaagtcaaactgttttcatataaactataatttgttttcataagctctcctgaagagcttatgaaaat 17989051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 98 - 164
Target Start/End: Original strand, 36370645 - 36370711
Alignment:
Q  98 aagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    |||| ||||| |||||| |||| ||||||| ||||| ||||||||||||||||||||||||| ||||    
T  36370645 aagttaaactgttttcacataagctataagttgtttccataaactatcctgaagagcttatggaaat 36370711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 97 - 198
Target Start/End: Complemental strand, 44151575 - 44151476
Alignment:
Q  97 aaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcata 196  Q
    ||||| ||||| ||| ||||||| ||||||| ||||||||||||||||| |||| |||||||| |||  ||||  |||||||  ||| ||||||||||||    
T  44151575 aaagtaaaactgtttccatataagctataagttgttttcataaactatcttgaaaagcttatggaaa--taagctgaaaacatcttatggacatgtcata 44151478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 12110330 - 12110402
Alignment:
Q  92 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    |||| ||||||||| | ||||  ||||| ||||||||||||||||||| ||||| |||||| |||||||||||    
T  12110330 aaaataaagtcaaattgttttggtataagctataagctgttttcataagctatcttgaagaacttatgaaaat 12110402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 30456550 - 30456478
Alignment:
Q  92 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    |||| ||||||||| | |||||||||||  ||||||  |||||||||||||||| || |||||||||||||||    
T  30456550 aaaataaagtcaaattgttttcatataagttataagtggttttcataaactatcttggagagcttatgaaaat 30456478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 104 - 150
Target Start/End: Complemental strand, 1413166 - 1413120
Alignment:
Q  104 aacttttttcatataatctataagctgttttcataaactatcctgaa 150  Q
    ||||||||||||||||||||||||||||||  |||||||||| ||||    
T  1413166 aacttttttcatataatctataagctgtttcaataaactatcttgaa 1413120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 53 - 164
Target Start/End: Original strand, 47941250 - 47941365
Alignment:
Q  53 tataagtgcttatgaataagttatttctataacatt----gacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctg 148  Q
    |||||| ||||| ||||||| |||||||||||||      ||||||| || |||||| | ||||  |||||||||||| |||||||||||| |||||| |    
T  47941250 tataagcgcttaagaataagctatttctataacacaacaagacaaaataaggtcaaattattttagtataatctataaactgttttcataagctatcccg 47941349  T
Q  149 aagagcttatgaaaat 164  Q
     |||| ||||||||||    
T  47941350 gagagtttatgaaaat 47941365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 97 - 146
Target Start/End: Complemental strand, 5369786 - 5369737
Alignment:
Q  97 aaagtcaaacttttttcatataatctataagctgttttcataaactatcc 146  Q
    ||||||||||| ||||||||||  ||||||||||||||||||| ||||||    
T  5369786 aaagtcaaactgttttcatatatgctataagctgttttcataagctatcc 5369737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 158
Target Start/End: Complemental strand, 44917675 - 44917570
Alignment:
Q  54 ataagtgcttatgaataagttatttctataacattgacaaaag-aaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaaga 152  Q
    ||||| |||||| |||||||| |||||||||||  |   |||| ||||||||||| ||||  ||||||||||||| ||||| ||||||| ||||| ||||    
T  44917675 ataagcgcttataaataagttgtttctataacacaggataaagcaaagtcaaactgtttttgtataatctataagttgtttccataaaccatcctaaaga 44917576  T
Q  153 gcttat 158  Q
    | ||||    
T  44917575 gattat 44917570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 115 - 164
Target Start/End: Complemental strand, 46104644 - 46104595
Alignment:
Q  115 tataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    ||||| ||||||| ||||||||||| |||| |||||||||||||||||||    
T  46104644 tataagctataagttgttttcataagctatgctgaagagcttatgaaaat 46104595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 7623108 - 7623180
Alignment:
Q  92 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    |||| |||||| |||| |||| |||||| || |||||| ||||||||||||||| ||||||| ||| ||||||    
T  7623108 aaaataaagtccaactctttttatataagctgtaagctattttcataaactatcttgaagagtttacgaaaat 7623180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 157
Target Start/End: Original strand, 25296971 - 25297019
Alignment:
Q  109 ttttcatataatctataagctgttttcataaactatcctgaagagctta 157  Q
    ||||||||||| ||||||||||||||||||||||| | || ||||||||    
T  25296971 ttttcatataaactataagctgttttcataaactaccatgtagagctta 25297019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 28340938 - 28340878
Alignment:
Q  98 aagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttat 158  Q
    |||||||| | || |||||||| ||||||||||||||||||| |||||||  |||||||||    
T  28340938 aagtcaaattgttgtcatataagctataagctgttttcataagctatcctagagagcttat 28340878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 29363488 - 29363560
Alignment:
Q  92 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    |||| ||||||||||| ||||||||| |  ||||||||||| ||||||  ||||||| |||||||||| ||||    
T  29363488 aaaataaagtcaaactgttttcatattagttataagctgttatcataagttatcctggagagcttatggaaat 29363560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 31338478 - 31338550
Alignment:
Q  92 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    |||| ||||||||||| |||| ||||||  |||||| ||||| |||||||||||||   ||||||||||||||    
T  31338478 aaaataaagtcaaactgtttttatataagttataagttgtttccataaactatcctatggagcttatgaaaat 31338550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 38010684 - 38010756
Alignment:
Q  92 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    |||| |||| |||| | ||||||||||| ||||||||||||||||||| |||||||  ||| |||||| ||||    
T  38010684 aaaacaaagccaaattgttttcatataagctataagctgttttcataatctatcctagagaacttatggaaat 38010756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 40689086 - 40689014
Alignment:
Q  92 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    |||| ||||| ||| | ||||||||||| ||||||||||| ||||||| |||||||| | | |||||||||||    
T  40689086 aaaataaagttaaattattttcatataagctataagctgtgttcataagctatcctggataacttatgaaaat 40689014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 44910574 - 44910638
Alignment:
Q  92 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagctt 156  Q
    |||| |||||||||||||||||| | || ||| ||| ||||||||||||||||| || |||||||    
T  44910574 aaaataaagtcaaacttttttcacacaagctaaaagttgttttcataaactatcatggagagctt 44910638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 164
Target Start/End: Original strand, 4966143 - 4966198
Alignment:
Q  109 ttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    ||||||||| |  |||||||||||||||||| | ||||||||||||||||| ||||    
T  4966143 ttttcatattaggtataagctgttttcataagccatcctgaagagcttatggaaat 4966198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 164
Target Start/End: Original strand, 10190770 - 10190837
Alignment:
Q  97 aaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    ||||||||||| ||||||||||| || |||  |||||||||||||||| || || |||||||| ||||    
T  10190770 aaagtcaaactgttttcatataaactgtaaattgttttcataaactattcttaaaagcttatggaaat 10190837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 139
Target Start/End: Original strand, 47004033 - 47004104
Alignment:
Q  69 taagttatttctataacatt-gacaaaagaaagtcaaacttttttcatataatctataagctgttttcataa 139  Q
    |||| ||||||||||||| | || |||| ||||||||||| |||| |||| | |||||||||||||||||||    
T  47004033 taagctatttctataacaatagataaaataaagtcaaactatttttatatgaactataagctgttttcataa 47004104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 158
Target Start/End: Complemental strand, 3610880 - 3610774
Alignment:
Q  53 tataagtgcttatgaataagttatttctataacatt-gacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaag 151  Q
    |||||||||||||| ||||| |||||||| ||||   || ||||  ||| |||||| ||||  ||||| ||||||| ||||||| |||||||||||  ||    
T  3610880 tataagtgcttatgtataagctatttctacaacaaaagataaaatgaaggcaaactgttttggtataagctataagttgttttcgtaaactatcctagag 3610781  T
Q  152 agcttat 158  Q
    |||||||    
T  3610780 agcttat 3610774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 139
Target Start/End: Complemental strand, 9527185 - 9527143
Alignment:
Q  97 aaagtcaaacttttttcatataatctataagctgttttcataa 139  Q
    ||||||||||| ||||||||||| ||||||| |||||||||||    
T  9527185 aaagtcaaactgttttcatataaactataagttgttttcataa 9527143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 158
Target Start/End: Original strand, 23918927 - 23918993
Alignment:
Q  92 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttat 158  Q
    |||| ||||||||| | ||||||||||| |||||| ||||  ||||||||||| |||||| ||||||    
T  23918927 aaaataaagtcaaattgttttcatataagctataatctgtaatcataaactattctgaagggcttat 23918993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 164
Target Start/End: Original strand, 47177604 - 47177678
Alignment:
Q  90 acaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    |||||| ||||| ||| | ||||||||||| |||||||||||||||| || ||||| || |||  ||||||||||    
T  47177604 acaaaacaaagttaaattgttttcatataagctataagctgttttcaaaagctatcttggagaatttatgaaaat 47177678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 97 - 158
Target Start/End: Original strand, 3559010 - 3559071
Alignment:
Q  97 aaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttat 158  Q
    ||||||| ||| ||| |||||||||||||||| |||||||| ||||||| || | |||||||    
T  3559010 aaagtcagactgtttacatataatctataagccgttttcattaactatcttgtatagcttat 3559071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 164
Target Start/End: Complemental strand, 12792632 - 12792591
Alignment:
Q  123 ataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    ||||||| ||||||||| ||||| ||||||||||||||||||    
T  12792632 ataagctattttcataagctatcttgaagagcttatgaaaat 12792591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 98 - 159
Target Start/End: Complemental strand, 39169509 - 39169449
Alignment:
Q  98 aagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatg 159  Q
    |||||| ||| ||||  |||||||||||| |||||||||||| |||||||| ||||||||||    
T  39169509 aagtcagactgtttttgtataatctataaactgttttcataagctatcctg-agagcttatg 39169449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 53 - 86
Target Start/End: Complemental strand, 47559748 - 47559715
Alignment:
Q  53 tataagtgcttatgaataagttatttctataaca 86  Q
    ||||||||||||||||||||||||||||| ||||    
T  47559748 tataagtgcttatgaataagttatttctacaaca 47559715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 116
Target Start/End: Original strand, 7244632 - 7244696
Alignment:
Q  53 tataagtgcttatgaataagttatttctataac-attgacaaaagaaagtcaaacttttttcata 116  Q
    |||||||||||||| ||||| |||||||||| | |  || |||||||||||||||| ||||||||    
T  7244632 tataagtgcttatgtataagctatttctatatcaaaagataaaagaaagtcaaactgttttcata 7244696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 161
Target Start/End: Complemental strand, 18350790 - 18350738
Alignment:
Q  109 ttttcatataatctataagctgttttcataaactatcctgaagagcttatgaa 161  Q
    ||||| |||||  |||||||||||||||||| ||||| || ||||||||||||    
T  18350790 ttttcgtataagttataagctgttttcataagctatcatggagagcttatgaa 18350738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 158
Target Start/End: Complemental strand, 36484169 - 36484069
Alignment:
Q  60 gcttatgaataagttatttctataaca-ttgacaaaagaaagtcaa-acttttttcatataatctataagctgttttcataaactatcctgaagagctta 157  Q
    ||||||||||||| | |||||||||||   || |||| ||||||||   ||||||| || |||||||||| |||||||| ||  ||||||||||||||||    
T  36484169 gcttatgaataagctctttctataacacacgaaaaaataaagtcaatttttttttcgtagaatctataagttgttttcacaagttatcctgaagagctta 36484070  T
Q  158 t 158  Q
    |    
T  36484069 t 36484069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 65; Significance: 9e-29; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 55 - 197
Target Start/End: Complemental strand, 17259021 - 17258880
Alignment:
Q  55 taagtgcttatgaataagttatttctataacatt-gacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagag 153  Q
    ||||||||||||||||||  ||||| ||||||   ||||||| ||||||||||| ||||| || |||| |||||||||||||||||||||||||||||||    
T  17259021 taagtgcttatgaataagccatttccataacacgcgacaaaataaagtcaaactattttcgtacaatcaataagctgttttcataaactatcctgaagag 17258922  T
Q  154 cttatgaaaatttaagaagaaaacagtttacggacatgtcataa 197  Q
    ||||||||||  ||||  |||||||| ||| | |||||||||||    
T  17258921 cttatgaaaa--taagctgaaaacagcttatgaacatgtcataa 17258880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 109 - 197
Target Start/End: Complemental strand, 32408675 - 32408589
Alignment:
Q  109 ttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcataa 197  Q
    ||||||||||| |||||| || ||||||||| ||||||||||||||||||| |||  |||| ||||| ||  |||||||||||||||||    
T  32408675 ttttcatataagctataaactattttcataagctatcctgaagagcttatggaaa--taagcagaaaccaacttacggacatgtcataa 32408589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 109 - 161
Target Start/End: Complemental strand, 2569778 - 2569726
Alignment:
Q  109 ttttcatataatctataagctgttttcataaactatcctgaagagcttatgaa 161  Q
    ||||||||||||||||||||||||||||||||||||| | || ||||||||||    
T  2569778 ttttcatataatctataagctgttttcataaactatcataaaaagcttatgaa 2569726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 14295476 - 14295540
Alignment:
Q  92 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagctt 156  Q
    |||| ||||||||||| ||||||||||| ||||||||||||||| ||| |||||||| |||||||    
T  14295476 aaaataaagtcaaactgttttcatataagctataagctgttttcgtaagctatcctggagagctt 14295540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 53 - 139
Target Start/End: Complemental strand, 32059728 - 32059642
Alignment:
Q  53 tataagtgcttatgaataagttatttctataacattgacaaaagaaagtcaaacttttttcatataatctataagctgttttcataa 139  Q
    |||||||||||||| ||||| | ||| | ||||   || |||| ||||||||||| ||||||||||| |||||||||||||||||||    
T  32059728 tataagtgcttatgtataagctgtttttgtaactaagataaaataaagtcaaactgttttcatataagctataagctgttttcataa 32059642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 59 - 151
Target Start/End: Complemental strand, 26209546 - 26209454
Alignment:
Q  59 tgcttatgaataagttatttctataacattgacaaaagaaagtcaaacttttttca-tataatctataagctgttttcataaactatcctgaag 151  Q
    |||||||| |||||||||||||||||||  || |||| |||||| || | |||||| ||||| ||||||||||||||||||| ||||| |||||    
T  26209546 tgcttatgtataagttatttctataacaa-gataaaataaagtccaattgttttcaatataagctataagctgttttcataagctatcatgaag 26209454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 164
Target Start/End: Complemental strand, 13604932 - 13604877
Alignment:
Q  109 ttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    ||||||||||| || ||||||||||||||||  |||| ||||||||||||||||||    
T  13604932 ttttcatataaactttaagctgttttcataagttatcttgaagagcttatgaaaat 13604877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 164
Target Start/End: Original strand, 33234292 - 33234403
Alignment:
Q  53 tataagtgcttatgaataagttatttctataacattgacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaaga 152  Q
    ||||||||||| || ||||||||||||||  |||   | ||||  |||||||||| |||| |||||| ||||||||| ||||| |||  ||| |||||||    
T  33234292 tataagtgcttgtgtataagttatttctacgacaaatataaaatgaagtcaaactgtttttatataagctataagctattttcgtaagttatgctgaaga 33234391  T
Q  153 gcttatgaaaat 164  Q
    ||||||| ||||    
T  33234392 gcttatgtaaat 33234403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 159
Target Start/End: Complemental strand, 38047955 - 38047888
Alignment:
Q  92 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatg 159  Q
    |||| ||||||||| | ||||||||||  ||||| ||||||||||||| |||||||| ||||||||||    
T  38047955 aaaataaagtcaaattattttcatatatactatatgctgttttcataagctatcctggagagcttatg 38047888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 122 - 164
Target Start/End: Original strand, 3237093 - 3237135
Alignment:
Q  122 tataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    |||||||||||||||||| ||||||| ||||||||||||||||    
T  3237093 tataagctgttttcataagctatcctaaagagcttatgaaaat 3237135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 54 - 139
Target Start/End: Original strand, 10907310 - 10907396
Alignment:
Q  54 ataagtgcttatgaataagttatttctataac-attgacaaaagaaagtcaaacttttttcatataatctataagctgttttcataa 139  Q
    ||||||| ||||| |||||||||||||||| | | ||  |||| ||| |||||||  ||||||||||||||||||||||||| ||||    
T  10907310 ataagtgtttatgtataagttatttctatagctaatggtaaaataaaatcaaactactttcatataatctataagctgtttttataa 10907396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 97 - 162
Target Start/End: Complemental strand, 18543292 - 18543226
Alignment:
Q  97 aaagtcaaactt-ttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaa 162  Q
    |||||||||||| |||| ||||||  |||||| ||||||||||| |||||||| |||||||||||||    
T  18543292 aaagtcaaacttgtttttatataagatataagttgttttcataagctatcctggagagcttatgaaa 18543226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 139
Target Start/End: Complemental strand, 18857538 - 18857453
Alignment:
Q  55 taagtgcttatgaataagttatttctataacatt-gacaaaagaaagtcaaacttttttcatataatctataagctgttttcataa 139  Q
    |||||| ||||||||||| |||||| ||||||   || |||| ||||||||| | ||||  |||||||||||||||||||||||||    
T  18857538 taagtgtttatgaataagctatttcaataacacacgataaaataaagtcaaattgtttttctataatctataagctgttttcataa 18857453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 109 - 197
Target Start/End: Complemental strand, 21768280 - 21768194
Alignment:
Q  109 ttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcataa 197  Q
    ||||||||||| || ||||||||||||||||  |||| ||||||||||| |||||  ||||  ||||||||  || |||||||||||||    
T  21768280 ttttcatataaactttaagctgttttcataagttatcttgaagagcttacgaaaa--taagttgaaaacagcgtatggacatgtcataa 21768194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 109 - 197
Target Start/End: Complemental strand, 41957534 - 41957448
Alignment:
Q  109 ttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcataa 197  Q
    ||||||| |||  |||||||||||||||||| |||||||  ||| ||||||||||  ||||| |||||||  ||| |||||||||||||    
T  41957534 ttttcatgtaagttataagctgttttcataagctatccttgagaacttatgaaaa--taagatgaaaacaacttatggacatgtcataa 41957448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 9202848 - 9202776
Alignment:
Q  92 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    |||| ||||| ||| | ||||||||||| | |||||||||||||||||  |||| |||||| |||||||||||    
T  9202848 aaaataaagttaaattgttttcatataagcaataagctgttttcataagttatcttgaagaacttatgaaaat 9202776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 129
Target Start/End: Original strand, 13193774 - 13193806
Alignment:
Q  97 aaagtcaaacttttttcatataatctataagct 129  Q
    |||||||||||||||||||||||||||||||||    
T  13193774 aaagtcaaacttttttcatataatctataagct 13193806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 157
Target Start/End: Complemental strand, 16945066 - 16945018
Alignment:
Q  109 ttttcatataatctataagctgttttcataaactatcctgaagagctta 157  Q
    |||||||| || ||||||||| ||||||| |||||||||||||||||||    
T  16945066 ttttcatagaagctataagctattttcattaactatcctgaagagctta 16945018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 165
Target Start/End: Original strand, 29201532 - 29201576
Alignment:
Q  121 ctataagctgttttcataaactatcctgaagagcttatgaaaatt 165  Q
    ||||||||||||||||||| |||||||| |||||||||| |||||    
T  29201532 ctataagctgttttcataacctatcctggagagcttatggaaatt 29201576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 159
Target Start/End: Original strand, 12975317 - 12975384
Alignment:
Q  92 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatg 159  Q
    |||| ||| ||||| | ||||||||||| ||||||||||| ||||||| ||||| || ||||||||||    
T  12975317 aaaataaaatcaaattgttttcatataagctataagctgtgttcataagctatcttggagagcttatg 12975384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 164
Target Start/End: Original strand, 30217077 - 30217124
Alignment:
Q  117 taatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    |||||||||||||| |||||||| |||||||| |||||||||| ||||    
T  30217077 taatctataagctgctttcataagctatcctggagagcttatggaaat 30217124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 127
Target Start/End: Complemental strand, 35135802 - 35135727
Alignment:
Q  53 tataagtgcttatgaataagttatttctataacatt-gacaaaagaaagtcaaacttttttcatataatctataag 127  Q
    |||||||| ||||| ||||| |||||||||||||   || |||| ||||||||||| ||||||||||| |||||||    
T  35135802 tataagtgtttatgtataagatatttctataacaaaagataaaataaagtcaaactattttcatataagctataag 35135727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 159
Target Start/End: Original strand, 8985636 - 8985698
Alignment:
Q  97 aaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatg 159  Q
    ||||||||||| |||||||||||| |  ||||| ||||||||| |||||||  ||||||||||    
T  8985636 aaagtcaaactattttcatataatttgcaagctattttcataagctatcctatagagcttatg 8985698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 197
Target Start/End: Complemental strand, 28586866 - 28586763
Alignment:
Q  92 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatg 191  Q
    |||| ||||||||||| |||||||||||  ||||||||||||| |  | |||||||  |||||||||  |||  ||||  |||||||| ||||||| |||    
T  28586866 aaaataaagtcaaactgttttcatataaattataagctgttttgacgagctatcctagagagcttatcgaaa--taagctgaaaacagcttacggatatg 28586769  T
Q  192 tcataa 197  Q
    ||||||    
T  28586768 tcataa 28586763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 164
Target Start/End: Original strand, 29054896 - 29054950
Alignment:
Q  110 tttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    |||||||||| ||||||| ||||| ||||||||||| || |||||||||| ||||    
T  29054896 tttcatataagctataagttgtttccataaactatcatgtagagcttatggaaat 29054950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 164
Target Start/End: Original strand, 32197720 - 32197762
Alignment:
Q  122 tataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    |||||||||||| ||||| |||||||||||| |||||||||||    
T  32197720 tataagctgtttccataagctatcctgaagaacttatgaaaat 32197762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 197
Target Start/End: Original strand, 36639528 - 36639595
Alignment:
Q  128 ctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcataa 197  Q
    |||||||||||| ||||| |||||||||||||||||  ||||| |||||||  ||| ||||| |||||||    
T  36639528 ctgttttcataagctatcttgaagagcttatgaaaa--taagaggaaaacaacttatggacacgtcataa 36639595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 110 - 147
Target Start/End: Original strand, 18286779 - 18286816
Alignment:
Q  110 tttcatataatctataagctgttttcataaactatcct 147  Q
    |||||||| | |||||||||||||||||||||||||||    
T  18286779 tttcatattagctataagctgttttcataaactatcct 18286816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 109 - 150
Target Start/End: Complemental strand, 36181260 - 36181219
Alignment:
Q  109 ttttcatataatctataagctgttttcataaactatcctgaa 150  Q
    |||||||||||  ||||| |||||||||||||||||||||||    
T  36181260 ttttcatataaattataatctgttttcataaactatcctgaa 36181219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 122 - 163
Target Start/End: Complemental strand, 41929770 - 41929729
Alignment:
Q  122 tataagctgttttcataaactatcctgaagagcttatgaaaa 163  Q
    |||||| ||||||||||||||||| ||| |||||||||||||    
T  41929770 tataagttgttttcataaactatcatgaggagcttatgaaaa 41929729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 164
Target Start/End: Original strand, 2568644 - 2568700
Alignment:
Q  108 tttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    |||||| ||||| ||||||| ||||||||||| ||||| || |||||| ||||||||    
T  2568644 tttttcgtataagctataagttgttttcataagctatcatggagagctaatgaaaat 2568700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 3970780 - 3970708
Alignment:
Q  92 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    |||| |||||||| ||  |||| ||||||||| |||||  |||||||| |||| ||| |||||||||||||||    
T  3970780 aaaataaagtcaatctgctttcttataatctagaagctaatttcataagctatactggagagcttatgaaaat 3970708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 197
Target Start/End: Complemental strand, 10272525 - 10272428
Alignment:
Q  98 aagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcataa 197  Q
    |||||||| | ||||| ||||| ||||||| ||||||||||| | ||| || |||| |||||||||  ||||  |||||||  |||| ||||||||||||    
T  10272525 aagtcaaattgttttcgtataagctataagttgttttcataagccatcttggagagtttatgaaaa--taagctgaaaacaacttacagacatgtcataa 10272428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 12425541 - 12425613
Alignment:
Q  92 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    |||| ||||| ||| | ||||| ||||| |||||||||||||||| || ||||| || ||| |||||||||||    
T  12425541 aaaataaagttaaattgttttcgtataagctataagctgttttcacaagctatcttggagaacttatgaaaat 12425613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 36539716 - 36539780
Alignment:
Q  92 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagctt 156  Q
    |||| |||||||| || ||||||||||| ||||||| |||||| ||||  ||| |||||||||||    
T  36539716 aaaataaagtcaacctgttttcatataagctataagttgtttttataagttattctgaagagctt 36539780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 41016149 - 41016221
Alignment:
Q  92 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    |||| ||| ||||||| ||||||||||| ||||||| |||||||| || | ||| || | |||||||||||||    
T  41016149 aaaataaattcaaactgttttcatataagctataagttgttttcacaagccatcatggaaagcttatgaaaat 41016221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 55 - 145
Target Start/End: Original strand, 27508 - 27599
Alignment:
Q  55 taagtgcttatgaataagttatttctataacatt-gacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatc 145  Q
    |||||||||||| |||||||||||||||||||   || |||| ||||||||| | ||||||||||| ||||||| |||||||||||||||||    
T  27508 taagtgcttatgtataagttatttctataacagaagataaaataaagtcaaattgttttcatataaactataagttgttttcataaactatc 27599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 8e-17; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 68 - 159
Target Start/End: Complemental strand, 24887408 - 24887316
Alignment:
Q  68 ataagttatttctataacatt-gacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatg 159  Q
    ||||| ||||||||||||| | || |||| ||||||||||| | ||||||||| ||| ||||||||||||||| |||||||| ||||||||||    
T  24887408 ataagctatttctataacaatagataaaataaagtcaaactgtattcatataagctaaaagctgttttcataagctatcctggagagcttatg 24887316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 54 - 164
Target Start/End: Original strand, 36101499 - 36101610
Alignment:
Q  54 ataagtgcttatgaataagttatttctataacatt-gacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaaga 152  Q
    ||||||| ||||||||||| ||||||| ||| ||  || |||| |||||||||||  |||| ||||||||||||| |||||   || |||||||||||||    
T  36101499 ataagtggttatgaataagctatttctgtaatataagataaaataaagtcaaactgatttcgtataatctataagttgtttcattatactatcctgaaga 36101598  T
Q  153 gcttatgaaaat 164  Q
    ||||||||||||    
T  36101599 gcttatgaaaat 36101610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 103 - 196
Target Start/End: Complemental strand, 20502157 - 20502066
Alignment:
Q  103 aaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcata 196  Q
    ||||| ||||||||||  ||||||||||||||||||| |||||||||||||||||||| ||  ||||  |||||||  | ||||||||||||||    
T  20502157 aaactgttttcatatacgctataagctgttttcataagctatcctgaagagcttatgagaa--taagctgaaaacaaatgacggacatgtcata 20502066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 53 - 197
Target Start/End: Complemental strand, 27291039 - 27290898
Alignment:
Q  53 tataagtgcttatgaataagttatttctataacattgacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaaga 152  Q
    |||||||||||| | ||||| |||||||||||||  || |||| ||| || |||||||||||||||||||| ||||||||| ||| | |||||||| |||    
T  27291039 tataagtgcttaggtataaggtatttctataacaa-gataaaataaattcgaacttttttcatataatctaaaagctgtttgcattagctatcctgcaga 27290941  T
Q  153 gcttatgaaaatttaagaagaaaacagtttacggacatgtcataa 197  Q
    | | ||| |||  ||||  |||||||| ||| || ||||||||||    
T  27290940 gttcatggaaa--taagctgaaaacagcttatgggcatgtcataa 27290898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 25453959 - 25453887
Alignment:
Q  92 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    |||| ||||||||||| ||||| ||||| |||||| || |||||||||||||||||| | |||||||||||||    
T  25453959 aaaataaagtcaaactgttttcgtataacctataacctattttcataaactatcctggaaagcttatgaaaat 25453887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 109 - 197
Target Start/End: Complemental strand, 33405250 - 33405163
Alignment:
Q  109 ttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcataa 197  Q
    ||||||||||| ||||||||||||||||||| ||||| |||||| |||||| ||| |||||  |||||||||||| | |||| ||||||    
T  33405250 ttttcatataagctataagctgttttcataagctatcttgaagaacttatg-aaagttaagccgaaaacagtttatgaacatatcataa 33405163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 53 - 164
Target Start/End: Complemental strand, 24158642 - 24158531
Alignment:
Q  53 tataagtgcttatgaataagttatttctataacat-tgacaaaag-aaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaa 150  Q
    |||||||||||||| |||||||||||||||||||  |||  |||| ||||| ||||| |||  ||||||   ||||||||||||||||| |||||||| |    
T  24158642 tataagtgcttatgtataagttatttctataacaaatgaataaagtaaagtgaaactgttt--atataagtaataagctgttttcataagctatcctgga 24158545  T
Q  151 gagcttatgaaaat 164  Q
    ||||||||| ||||    
T  24158544 gagcttatggaaat 24158531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 55 - 134
Target Start/End: Complemental strand, 20192744 - 20192664
Alignment:
Q  55 taagtgcttatgaataagttatttctataacatt-gacaaaagaaagtcaaacttttttcatataatctataagctgtttt 134  Q
    |||||||||||| ||||| ||||| |||||||   || |||| ||||||||||  ||||||||||||||||||||||||||    
T  20192744 taagtgcttatgtataagctatttatataacaaaagataaaataaagtcaaacagttttcatataatctataagctgtttt 20192664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 197
Target Start/End: Complemental strand, 3044384 - 3044256
Alignment:
Q  68 ataagttatttctataac-attgacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaattt 166  Q
    |||| ||||||||||||| |  ||||||| |||  ||| || |||||||||||||||||| |||||||| ||  ||| |||| ||||||||||||||  |    
T  3044384 ataaattatttctataacgaaagacaaaataaaaccaatctgttttcatataatctataacctgttttcttatgctaacctggagagcttatgaaaa--t 3044287  T
Q  167 aagaagaaaacagtttacggacatgtcataa 197  Q
    |||  |||||||| ||| | |||||||||||    
T  3044286 aagttgaaaacagcttatgaacatgtcataa 3044256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 164
Target Start/End: Original strand, 36139809 - 36139920
Alignment:
Q  54 ataagtgcttatgaataagttatttctataacatt-gacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaaga 152  Q
    ||||||| ||||||||||| ||||||| ||| ||  || |||| |||||||||||  |||| ||||| ||||||| |||||   || |||||| ||||||    
T  36139809 ataagtggttatgaataagctatttctgtaatataagataaaataaagtcaaactgatttcgtataagctataagttgtttcattatactatcttgaaga 36139908  T
Q  153 gcttatgaaaat 164  Q
    ||||||||||||    
T  36139909 gcttatgaaaat 36139920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 53 - 158
Target Start/End: Original strand, 27792802 - 27792908
Alignment:
Q  53 tataagtgcttatgaataagttatttctataacatt-gacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaag 151  Q
    |||||||||||||| ||||| |||||| | ||||   || |||| || |||||||| ||||||||||| ||  ||| ||||||||||||||||| || ||    
T  27792802 tataagtgcttatgtataagctatttcaaaaacaaaagataaaataaggtcaaactattttcatataagctgcaagttgttttcataaactatcatgtag 27792901  T
Q  152 agcttat 158  Q
    |||||||    
T  27792902 agcttat 27792908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 92 - 159
Target Start/End: Complemental strand, 33965591 - 33965522
Alignment:
Q  92 aaaagaaagtcaaacttttttcatataat--ctataagctgttttcataaactatcctgaagagcttatg 159  Q
    |||| ||||||||||| |||||||||||   ||||||| ||||||||||| ||||| |||||||||||||    
T  33965591 aaaataaagtcaaactgttttcatataaaagctataagatgttttcataagctatcttgaagagcttatg 33965522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 137
Target Start/End: Original strand, 2201098 - 2201143
Alignment:
Q  92 aaaagaaagtcaaacttttttcatataatctataagctgttttcat 137  Q
    |||| ||||||||||| ||||||||||| |||||||||||||||||    
T  2201098 aaaacaaagtcaaactgttttcatataagctataagctgttttcat 2201143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 157
Target Start/End: Complemental strand, 20874387 - 20874339
Alignment:
Q  109 ttttcatataatctataagctgttttcataaactatcctgaagagctta 157  Q
    ||||||||||| ||||||||||||||||||| ||||||| || ||||||    
T  20874387 ttttcatataaactataagctgttttcataagctatcctaaatagctta 20874339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 164
Target Start/End: Original strand, 22232756 - 22232868
Alignment:
Q  53 tataagtgcttatgaataagttatttctataacat-tgacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaag 151  Q
    ||||| |||| ||| ||||| ||||| |||||||  ||| |||| ||||||||||| |||||||||||    |||||| ||||||||| ||||| || ||    
T  22232756 tataaatgctcatgtataagctatttatataacaaatgataaaataaagtcaaactgttttcatataagtcgtaagctattttcataagctatcatgtag 22232855  T
Q  152 agcttatgaaaat 164  Q
     ||||||||||||    
T  22232856 ggcttatgaaaat 22232868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 43875624 - 43875684
Alignment:
Q  98 aagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttat 158  Q
    |||||||||| || |||||||| ||||||| ||||||||||| ||||| || |||||||||    
T  43875624 aagtcaaactgttctcatataagctataagttgttttcataagctatcatggagagcttat 43875684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 157
Target Start/End: Complemental strand, 47904146 - 47904098
Alignment:
Q  109 ttttcatataatctataagctgttttcataaactatcctgaagagctta 157  Q
    |||||||||||||||||||  |||||||||| ||||| |||||||||||    
T  47904146 ttttcatataatctataagtggttttcataagctatcgtgaagagctta 47904098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 164
Target Start/End: Original strand, 52618990 - 52619045
Alignment:
Q  109 ttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    |||||||||||  ||||||||||||||| || ||||| |||||||||| |||||||    
T  52618990 ttttcatataagttataagctgttttcacaagctatcttgaagagcttgtgaaaat 52619045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 139
Target Start/End: Complemental strand, 33674792 - 33674710
Alignment:
Q  54 ataagtgcttatgaataagttatttctataacattgacaaaagaaagtcaaacttttttcatataatctataagctgttttcataa 139  Q
    ||||| ||||||  ||||| |||||||||||||   |||||| ||||| ||| ||||| ||||||| |||||||||||||||||||    
T  33674792 ataagcgcttatttataagctatttctataacaa--acaaaa-aaagttaaattttttgcatataaactataagctgttttcataa 33674710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 146
Target Start/End: Original strand, 38462251 - 38462305
Alignment:
Q  92 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcc 146  Q
    |||| ||||||||||| ||||||||||  |||||| |||||||||||| ||||||    
T  38462251 aaaataaagtcaaactgttttcatatatgctataaactgttttcataagctatcc 38462305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 109 - 197
Target Start/End: Complemental strand, 1217883 - 1217797
Alignment:
Q  109 ttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcataa 197  Q
    ||||||| |||  |||||||||||||||||| |||||||  ||| |||||||||   ||||| |||||||  ||| |||||||||||||    
T  1217883 ttttcatgtaagttataagctgttttcataagctatccttgagaacttatgaaa--gtaagatgaaaacaacttatggacatgtcataa 1217797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 56 - 140
Target Start/End: Original strand, 1395604 - 1395689
Alignment:
Q  56 aagtgcttatgaataagttatttctataacatt-gacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaa 140  Q
    |||||| |||| ||||| |||||||||||||   || |||| ||||||||| | ||||||||||| |||| | |||||||||||||    
T  1395604 aagtgcatatgtataagctatttctataacaaaagataaaataaagtcaaattattttcatataagctatgaactgttttcataaa 1395689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 92 - 145
Target Start/End: Complemental strand, 19679428 - 19679375
Alignment:
Q  92 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatc 145  Q
    |||| ||||||||||| ||||| ||||| ||||||| |||||| ||||||||||    
T  19679428 aaaataaagtcaaactgttttcttataagctataagttgtttttataaactatc 19679375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 115 - 164
Target Start/End: Original strand, 22203423 - 22203472
Alignment:
Q  115 tataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    ||||||||||||| ||||||||||| ||||| || ||| |||||||||||    
T  22203423 tataatctataagttgttttcataagctatcttggagaacttatgaaaat 22203472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 164
Target Start/End: Original strand, 22343589 - 22343650
Alignment:
Q  103 aaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    ||||| |||||||||||  |||||||||||| ||||| |||| |||||||| ||||| ||||    
T  22343589 aaactgttttcatataagttataagctgtttccataagctatactgaagagattatgcaaat 22343650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 92 - 157
Target Start/End: Original strand, 28306128 - 28306193
Alignment:
Q  92 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagctta 157  Q
    |||| ||||||||||| |||||||||||  || ||| ||||||||||| |||| | ||||||||||    
T  28306128 aaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagctta 28306193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 56 - 164
Target Start/End: Original strand, 54775061 - 54775169
Alignment:
Q  56 aagtgcttatgaataagttatttctataac-attgacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagc 154  Q
    ||||||||| |  ||||||||||||||||| |  || |||| ||||||||||  |||| ||||||| |||||||||||||| |||  |||| || ||||     
T  54775061 aagtgcttacgtttaagttatttctataacaaaagataaaataaagtcaaaccatttttatataat-tataagctgttttcgtaagttatcatggagagt 54775159  T
Q  155 ttatgaaaat 164  Q
    ||||||||||    
T  54775160 ttatgaaaat 54775169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 1816553 - 1816625
Alignment:
Q  92 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    |||| ||||||||||| ||||  |||||  |||||| ||||||||||| |||| ||| ||||||||| |||||    
T  1816553 aaaataaagtcaaactgtttttgtataagatataagttgttttcataagctatactggagagcttatcaaaat 1816625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 164
Target Start/End: Original strand, 2071058 - 2071098
Alignment:
Q  124 taagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    |||||||||||||||| ||||  ||||||||||||||||||    
T  2071058 taagctgttttcataagctatgatgaagagcttatgaaaat 2071098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 2197806 - 2197878
Alignment:
Q  92 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    |||| ||| ||||||| ||||||||||| | ||||||| |||||||||  | || || |||||||||||||||    
T  2197806 aaaataaaatcaaactattttcatataagcaataagctattttcataacttgtcttggagagcttatgaaaat 2197878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 19679855 - 19679807
Alignment:
Q  97 aaagtcaaacttttttcatataatctataagctgttttcataaactatc 145  Q
    ||||||| ||| ||||||||||| ||||| | |||||||||||||||||    
T  19679855 aaagtcatactgttttcatataagctataggttgttttcataaactatc 19679807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 21367637 - 21367709
Alignment:
Q  92 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    |||| ||||| ||| | ||||| |||||| |||||| ||||||||||| ||||| || ||| |||||||||||    
T  21367637 aaaataaagttaaattgttttcgtataatgtataagttgttttcataagctatcttggagaacttatgaaaat 21367709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 148
Target Start/End: Complemental strand, 21872363 - 21872315
Alignment:
Q  100 gtcaaacttttttcatataatctataagctgttttcataaactatcctg 148  Q
    |||||| |||||| |||||| ||||||| ||||||||||| ||||||||    
T  21872363 gtcaaatttttttgatataagctataagttgttttcataagctatcctg 21872315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 23315596 - 23315668
Alignment:
Q  92 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    |||| ||||||||| | ||||||||||  ||||||| ||||| ||||| |||| || ||||||||||| ||||    
T  23315596 aaaataaagtcaaattgttttcatataggctataagatgtttccataagctattctaaagagcttatggaaat 23315668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 24785175 - 24785247
Alignment:
Q  92 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    |||| |||||||| || ||||  ||||||||||||  ||||||||||| |||||||  |||||||||| ||||    
T  24785175 aaaataaagtcaatctgtttttgtataatctataacgtgttttcataagctatcctcgagagcttatgtaaat 24785247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 32064410 - 32064481
Alignment:
Q  92 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    |||| ||||||||| | |||| ||| || ||||| | ||| ||||||||||||||| ||||||||||||||||    
T  32064410 aaaataaagtcaaattatttttataaaa-ctatatgttgtgttcataaactatcctaaagagcttatgaaaat 32064481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 147
Target Start/End: Original strand, 42753575 - 42753631
Alignment:
Q  91 caaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcct 147  Q
    ||||| |||||||||| |||||||||||| ||||||| |||||| | || |||||||    
T  42753575 caaaacaaagtcaaacatttttcatataagctataagttgtttttacaagctatcct 42753631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 165
Target Start/End: Complemental strand, 52440745 - 52440689
Alignment:
Q  109 ttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatt 165  Q
    |||||| |||| ||||||||| |||||||||  |||| |||||| ||||||||||||    
T  52440745 ttttcaaataagctataagctattttcataatttatcttgaagaacttatgaaaatt 52440689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 8e-17; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 97 - 195
Target Start/End: Complemental strand, 6231912 - 6231815
Alignment:
Q  97 aaagtcaaact-tttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcat 195  Q
    ||||||||||| |||||||||||||||||||||||||||| ||| ||| |||||||| |||||  |||  ||||  |||||||||||| |||||||||||    
T  6231912 aaagtcaaactgtttttcatataatctataagctgttttcgtaagctaacctgaagaacttatagaaa--taagctgaaaacagtttatggacatgtcat 6231815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 54 - 161
Target Start/End: Complemental strand, 33527286 - 33527178
Alignment:
Q  54 ataagtgcttatgaataagttatttctataacatt-gacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaaga 152  Q
    ||||| ||||||||||||| |||||||| ||||   || |||| | ||||||||| |||||||||||||||||||||||||||||||  ||||||  |||    
T  33527286 ataagcgcttatgaataagctatttctaaaacaaaagataaaatacagtcaaactgttttcatataatctataagctgttttcataagttatcctcgaga 33527187  T
Q  153 gcttatgaa 161  Q
     ||||||||    
T  33527186 tcttatgaa 33527178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 53 - 157
Target Start/End: Original strand, 17269180 - 17269285
Alignment:
Q  53 tataagtgcttatgaataagttatttctataacatt-gacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaag 151  Q
    |||||||||||||| |||||||||||||| ||||   |  |||| ||||||||| | ||||||||||| | ||||| ||||||||||| |||||||| ||    
T  17269180 tataagtgcttatgtataagttatttctagaacaaaagtgaaaataaagtcaaattgttttcatataagcaataagttgttttcataagctatcctggag 17269279  T
Q  152 agctta 157  Q
    ||||||    
T  17269280 agctta 17269285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 7218174 - 7218102
Alignment:
Q  92 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    |||| ||||||||| | ||||||||||| ||||||| ||||||||||| |||||||| ||| |||||||||||    
T  7218174 aaaataaagtcaaattgttttcatataagctataagttgttttcataacctatcctggagaacttatgaaaat 7218102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 68 - 164
Target Start/End: Original strand, 44422646 - 44422741
Alignment:
Q  68 ataagttatttctataacattgacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    ||||| ||||| |||||||| || |||| ||  ||||||| ||||||||||| ||||||||| |||| |||| |||||||| |||||||||||||||    
T  44422646 ataagctatttttataacat-gataaaataatctcaaactgttttcatataagctataagctatttttataagctatcctggagagcttatgaaaat 44422741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 62 - 155
Target Start/End: Complemental strand, 48830207 - 48830113
Alignment:
Q  62 ttatgaataagttatttctataac-attgacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagct 155  Q
    ||||| ||||||||||||||| || |  || |||| ||||||||||| ||||||||||| |||||| |||||||||||| |||| || |||||||    
T  48830207 ttatgtataagttatttctattaccaaagataaaataaagtcaaactattttcatataagctataaactgttttcataagctattctaaagagct 48830113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 164
Target Start/End: Complemental strand, 4078242 - 4078177
Alignment:
Q  99 agtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    ||||||||| ||||||||||||||||||| ||||||||||| ||||| ||  ||||| ||||||||    
T  4078242 agtcaaactattttcatataatctataagttgttttcataagctatcatggcgagctaatgaaaat 4078177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 92 - 153
Target Start/End: Complemental strand, 37272686 - 37272625
Alignment:
Q  92 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagag 153  Q
    |||| |||||||| || ||||||||||| |||||||||||||||||||| ||||||| ||||    
T  37272686 aaaataaagtcaatctgttttcatataagctataagctgttttcataaattatcctggagag 37272625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 53 - 164
Target Start/End: Original strand, 10854663 - 10854775
Alignment:
Q  53 tataagtgcttatgaataagttatttctataacatt-gacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaag 151  Q
    |||||||| |||||||||||||||||||  || |   || |||| |||||||||||  |||  ||||||||||| | |||||||||| |||||||||||     
T  10854663 tataagtggttatgaataagttatttctgaaatacaagataaaataaagtcaaactgattttgtataatctatatgttgttttcatatactatcctgaac 10854762  T
Q  152 agcttatgaaaat 164  Q
    |||||| ||||||    
T  10854763 agcttaagaaaat 10854775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 198
Target Start/End: Original strand, 30257653 - 30257757
Alignment:
Q  92 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatg 191  Q
    |||| ||||||||||| ||| ||||||| || |||| |||||||||||||||||||| || ||||||  |||  ||||  |||||||| ||| | |||||    
T  30257653 aaaataaagtcaaactgtttccatataagctttaagttgttttcataaactatcctggagggcttatagaaa--taagctgaaaacagcttatgaacatg 30257750  T
Q  192 tcataaa 198  Q
    |||||||    
T  30257751 tcataaa 30257757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 156
Target Start/End: Complemental strand, 47960715 - 47960660
Alignment:
Q  101 tcaaacttttttcatataatctataagctgttttcataaactatcctgaagagctt 156  Q
    ||||||| ||||||||||| |||||||| ||||||||||  |||||||||||||||    
T  47960715 tcaaactattttcatataagctataagccgttttcataagttatcctgaagagctt 47960660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 109 - 163
Target Start/End: Complemental strand, 25005880 - 25005826
Alignment:
Q  109 ttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaa 163  Q
    ||||||||||| ||||||| ||||||||||| |||||||| ||||||||| ||||    
T  25005880 ttttcatataagctataagttgttttcataagctatcctggagagcttataaaaa 25005826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 92 - 197
Target Start/End: Complemental strand, 27887218 - 27887115
Alignment:
Q  92 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatg 191  Q
    |||| ||||||||||  ||| ||||||| ||||||| ||||||||||||||||| || ||||| ||| ||||  ||||   |||||| |||| |||||||    
T  27887218 aaaataaagtcaaacaatttccatataagctataagttgttttcataaactatcatggagagcatataaaaa--taagctaaaaacaatttatggacatg 27887121  T
Q  192 tcataa 197  Q
    ||||||    
T  27887120 tcataa 27887115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 100 - 153
Target Start/End: Complemental strand, 4363724 - 4363671
Alignment:
Q  100 gtcaaacttttttcatataatctataagctgttttcataaactatcctgaagag 153  Q
    |||||||| ||||||||||| |||||| || ||||||||| |||||||||||||    
T  4363724 gtcaaactgttttcatataagctataacctattttcataagctatcctgaagag 4363671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 197
Target Start/End: Original strand, 4622072 - 4622166
Alignment:
Q  101 tcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcataa 197  Q
    ||||||| ||||||||||| ||||||||||||| ||||  ||||| || ||||||| ||||||  ||||   ||||||| ||| |||||||||||||    
T  4622072 tcaaactcttttcatataagctataagctgtttccatatgctatcttggagagcttgtgaaaa--taagctaaaaacagcttatggacatgtcataa 4622166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 115 - 164
Target Start/End: Complemental strand, 4700143 - 4700094
Alignment:
Q  115 tataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    ||||| |||||| ||||||| ||||||||||||| |||||||||||||||    
T  4700143 tataagctataaactgtttttataaactatcctggagagcttatgaaaat 4700094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 115 - 164
Target Start/End: Complemental strand, 7137075 - 7137026
Alignment:
Q  115 tataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    ||||||||||||||||||||||||| ||||| || ||| |||||||||||    
T  7137075 tataatctataagctgttttcataagctatcttggagaacttatgaaaat 7137026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 115 - 164
Target Start/End: Original strand, 7472304 - 7472353
Alignment:
Q  115 tataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    ||||||||||||||||||| ||||| ||||| || |||||||||||||||    
T  7472304 tataatctataagctgtttccataagctatcttggagagcttatgaaaat 7472353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 68 - 164
Target Start/End: Complemental strand, 10199533 - 10199436
Alignment:
Q  68 ataagttatttctataacatt-gacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    ||||||||||||||||||    || |||| ||||||||||| ||||| ||||||| ||||||| ||||||||| ||||  |  |||||||||||||||    
T  10199533 ataagttatttctataacccaagataaaataaagtcaaactattttcgtataatcgataagcttttttcataagctattttagagagcttatgaaaat 10199436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 115 - 164
Target Start/End: Original strand, 34290229 - 34290278
Alignment:
Q  115 tataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    ||||| ||||||||||||||||||| ||||| |||||| |||||||||||    
T  34290229 tataagctataagctgttttcataagctatcttgaagaacttatgaaaat 34290278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 144
Target Start/End: Complemental strand, 10581177 - 10581125
Alignment:
Q  92 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactat 144  Q
    |||| ||||||||||||||||||| ||| ||||||| ||||||||||| ||||    
T  10581177 aaaataaagtcaaacttttttcatttaagctataagttgttttcataagctat 10581125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 34179972 - 34179900
Alignment:
Q  92 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    |||| ||||||||| | |||| || ||| |||||| ||||||||||||||||||||||| || ||||| ||||    
T  34179972 aaaataaagtcaaattgttttaatctaagctataaactgttttcataaactatcctgaaaagtttatggaaat 34179900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 139
Target Start/End: Original strand, 49517015 - 49517087
Alignment:
Q  68 ataagttatttctataacatt-gacaaaagaaagtcaaacttttttcatataatctataagctgttttcataa 139  Q
    |||||||||||||||||||   || |||| ||||||||| | ||||||| ||| |||||||||||||||||||    
T  49517015 ataagttatttctataacaaaagataaaataaagtcaaattgttttcatttaagctataagctgttttcataa 49517087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 163
Target Start/End: Complemental strand, 7274079 - 7273968
Alignment:
Q  53 tataagtgcttatgaataagttatttctataacatt-gacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaag 151  Q
    ||||| |||||||| ||| ||||||| |||||||   ||  ||| ||||||||| | |||||||| ||  |||||||||||| ||||||||| | |||||    
T  7274079 tataaatgcttatgtatatgttatttttataacaaaagatgaaataaagtcaaattgttttcatacaagttataagctgtttccataaactaccttgaag 7273980  T
Q  152 agcttatgaaaa 163  Q
    ||||||| ||||    
T  7273979 agcttattaaaa 7273968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 164
Target Start/End: Original strand, 24913438 - 24913505
Alignment:
Q  97 aaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    |||||||| || ||||||||||  |||||||||||| |||||||||||||  |||| || ||||||||    
T  24913438 aaagtcaagctattttcatatatgctataagctgttctcataaactatccacaagacctcatgaaaat 24913505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 164
Target Start/End: Original strand, 35017563 - 35017618
Alignment:
Q  109 ttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    ||||| ||||||||||| ||||||||||||| || ||||| |||||||||| ||||    
T  35017563 ttttcgtataatctatatgctgttttcataagctgtcctggagagcttatggaaat 35017618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 164
Target Start/End: Original strand, 3924604 - 3924666
Alignment:
Q  102 caaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    |||||| ||||| |||||||||| || |||||| |||| ||||||||||||| ||||| ||||    
T  3924604 caaactgttttcgtataatctattagttgtttttataagctatcctgaagagtttatggaaat 3924666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 139
Target Start/End: Original strand, 15361688 - 15361730
Alignment:
Q  97 aaagtcaaacttttttcatataatctataagctgttttcataa 139  Q
    ||||||||| | ||||||||||| |||||||||||||||||||    
T  15361688 aaagtcaaattattttcatataagctataagctgttttcataa 15361730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 158
Target Start/End: Complemental strand, 25006134 - 25006068
Alignment:
Q  92 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttat 158  Q
    |||| ||||||||| | ||||||||||| ||||||| ||||||||||| ||||| || ||| |||||    
T  25006134 aaaataaagtcaaattgttttcatataagctataagttgttttcataagctatcttggagatcttat 25006068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 164
Target Start/End: Complemental strand, 30259624 - 30259514
Alignment:
Q  56 aagtgcttatgaataagttatttctataacattg-acaaaagaaagtcaaacttttttcatataatctataagctgttttcataaa-ctatcctgaagag 153  Q
    ||||||||||| | ||| |||||||||||||    | |||| |||||||||||  ||| |||||| ||||||||||||| |||||| ||||| || ||||    
T  30259624 aagtgcttatgcacaagctatttctataacaaaatataaaataaagtcaaactgctttgatataagctataagctgtttgcataaagctatcatggagag 30259525  T
Q  154 cttatgaaaat 164  Q
    |||||| ||||    
T  30259524 cttatggaaat 30259514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 164
Target Start/End: Complemental strand, 31517822 - 31517768
Alignment:
Q  110 tttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    |||||||||| ||||||||||| ||||||| || || || |||||||||||||||    
T  31517822 tttcatataagctataagctgtcttcataatctgtcttggagagcttatgaaaat 31517768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 97 - 158
Target Start/End: Complemental strand, 4549637 - 4549576
Alignment:
Q  97 aaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttat 158  Q
    ||||| ||||| |||||||| || ||||||| ||||||||||| | |||||| |||||||||    
T  4549637 aaagtaaaactgttttcatacaagctataagatgttttcataagcaatcctggagagcttat 4549576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 97 - 197
Target Start/End: Original strand, 6292468 - 6292566
Alignment:
Q  97 aaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcata 196  Q
    ||||||||| | |||||| ||||  |||||||| ||||| ||||||||  || ||||||||||||||  ||||  |||||||| ||| | ||||||||||    
T  6292468 aaagtcaaattattttcacataacttataagctattttcgtaaactattttggagagcttatgaaaa--taagctgaaaacagcttatgaacatgtcata 6292565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 99 - 164
Target Start/End: Original strand, 16322826 - 16322891
Alignment:
Q  99 agtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    ||||||||| |||||||| ||  |||||||||||||||||  ||||  ||||||||||||| ||||    
T  16322826 agtcaaactattttcatagaagttataagctgttttcataggctattttgaagagcttatggaaat 16322891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 25479570 - 25479623
Alignment:
Q  111 ttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    ||||||||  ||||||| ||||||||||| |||||||  |||||||||||||||    
T  25479570 ttcatataggctataagttgttttcataagctatcctagagagcttatgaaaat 25479623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 69 - 137
Target Start/End: Complemental strand, 29007840 - 29007771
Alignment:
Q  69 taagttatttctataacatt-gacaaaagaaagtcaaacttttttcatataatctataagctgttttcat 137  Q
    ||||||||||||||||||   || |||  ||||||||||| ||||||||||| ||||||| |||||||||    
T  29007840 taagttatttctataacaaaagaaaaattaaagtcaaactattttcatataagctataagttgttttcat 29007771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 73 - 197
Target Start/End: Original strand, 29723440 - 29723562
Alignment:
Q  73 ttatttctataacattgacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaag 172  Q
    |||||||||||||   || |||| ||| ||||||| ||||||||||  ||||||| || ||||| || ||| |||| || | ||||| ||||  |||  |    
T  29723440 ttatttctataacgaagataaaataaactcaaactattttcatatatgctataagttgctttcacaagctaccctgcagtggttatgtaaat--aagttg 29723537  T
Q  173 aaaacagtttacggacatgtcataa 197  Q
    ||||||||||| |||||||||||||    
T  29723538 aaaacagtttatggacatgtcataa 29723562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 92 - 165
Target Start/End: Complemental strand, 44032099 - 44032026
Alignment:
Q  92 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatt 165  Q
    |||| ||||||||| | ||||||||||| |||||| || ||||| |||  |||| ||||||||||||| |||||    
T  44032099 aaaataaagtcaaattgttttcatataagctataaactattttcttaagttatcttgaagagcttatggaaatt 44032026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 165
Target Start/End: Complemental strand, 4019731 - 4019620
Alignment:
Q  53 tataagtgcttatgaataagttatttctataacattgacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaaga 152  Q
    ||||| || |||||||||||| |||||||||  | ||| ||||  ||||||||   ||||||| ||| |||||||||| |||||||| |||| ||||| |    
T  4019731 tataaatgtttatgaataagtaatttctatacaaatgataaaatcaagtcaaatagttttcatgtaagctataagctg-tttcataagctattctgaata 4019633  T
Q  153 gcttatgaaaatt 165  Q
    | ||||| |||||    
T  4019632 gtttatggaaatt 4019620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 164
Target Start/End: Complemental strand, 5592765 - 5592713
Alignment:
Q  112 tcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    |||||||| ||||||| ||||||||||| |||  || ||||||||||||||||    
T  5592765 tcatataagctataagttgttttcataagctagtcttaagagcttatgaaaat 5592713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 157
Target Start/End: Original strand, 6074449 - 6074509
Alignment:
Q  97 aaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagctta 157  Q
    ||||| ||||| ||||||||||| |||| || ||||||| ||| ||| |||||||||||||    
T  6074449 aaagttaaactgttttcatataagctatgagttgttttcttaagctagcctgaagagctta 6074509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 8130411 - 8130459
Alignment:
Q  97 aaagtcaaacttttttcatataatctataagctgttttcataaactatc 145  Q
    ||||||||||| |||||| |||| ||||||| ||||||||||| |||||    
T  8130411 aaagtcaaactgttttcacataagctataagttgttttcataagctatc 8130459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 148
Target Start/End: Original strand, 9656620 - 9656676
Alignment:
Q  92 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctg 148  Q
    |||| ||||| ||| | ||||||||||| ||||||||||| ||||||| ||||||||    
T  9656620 aaaataaagttaaattattttcatataagctataagctgtgttcataagctatcctg 9656676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 127
Target Start/End: Original strand, 15360827 - 15360899
Alignment:
Q  56 aagtgcttatgaataagttatttctataacatt-gacaaaagaaagtcaaacttttttcatataatctataag 127  Q
    ||||| ||||| || ||||||||||||||||   || |||| ||||||||||| ||||||||||| |||||||    
T  15360827 aagtgtttatgtattagttatttctataacaaaagataaaataaagtcaaactgttttcatataagctataag 15360899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 37818395 - 37818427
Alignment:
Q  54 ataagtgcttatgaataagttatttctataaca 86  Q
    ||||||||||||| |||||||||||||||||||    
T  37818395 ataagtgcttatgtataagttatttctataaca 37818427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 164
Target Start/End: Complemental strand, 39348047 - 39347995
Alignment:
Q  112 tcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    ||||| || ||||||| |||||||||||||||||||| | |||||||| ||||    
T  39348047 tcatacaagctataagttgttttcataaactatcctgcaaagcttatggaaat 39347995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 164
Target Start/End: Original strand, 43332486 - 43332526
Alignment:
Q  124 taagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    |||||||||||||||| ||||| |||||||||||| |||||    
T  43332486 taagctgttttcataagctatcttgaagagcttattaaaat 43332526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 164
Target Start/End: Original strand, 52286608 - 52286720
Alignment:
Q  53 tataagtgcttatgaataagttatttctataac-attgacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaag 151  Q
    |||||| ||||||||||||| |||||||| ||| |  || |||| ||||| ||||  ||||||||||| |||||| || |||||||||   ||| |||||    
T  52286608 tataagcgcttatgaataagatatttctacaacaaaagataaaataaagttaaacaattttcatataagctataaactattttcataagtcatcttgaag 52286707  T
Q  152 agcttatgaaaat 164  Q
    || ||||| ||||    
T  52286708 agtttatggaaat 52286720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 3e-16; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 54 - 164
Target Start/End: Original strand, 4006645 - 4006756
Alignment:
Q  54 ataagtgcttatgaataagttatttctataacat-tgacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaaga 152  Q
    ||||||||||||| ||||| |||||||||||||  ||| |||| ||||||||| | |||| |||||| ||||||| ||||||||||| ||||||   |||    
T  4006645 ataagtgcttatgcataagatatttctataacaaatgataaaataaagtcaaattgtttttatataagctataagttgttttcataagctatccctgaga 4006744  T
Q  153 gcttatgaaaat 164  Q
    | ||||||||||    
T  4006745 ggttatgaaaat 4006756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 92 - 158
Target Start/End: Original strand, 2117373 - 2117439
Alignment:
Q  92 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttat 158  Q
    |||| ||||||||||| ||||||||||||||||||| |||||||||||  ||||||  |||||||||    
T  2117373 aaaacaaagtcaaactattttcatataatctataagttgttttcataagttatcctagagagcttat 2117439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 1497951 - 1498023
Alignment:
Q  92 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    |||| ||||||||||| ||||||||| |  ||||||  |||||||||||||||| || |||||||||||||||    
T  1497951 aaaataaagtcaaactgttttcatatgagttataagaagttttcataaactatcttggagagcttatgaaaat 1498023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 98 - 197
Target Start/End: Original strand, 3528779 - 3528876
Alignment:
Q  98 aagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcataa 197  Q
    ||||||||||||| ||||||||  ||||  | |||||||| ||||||| || ||||||||||||||  ||||| |||||||  ||| |||||||||||||    
T  3528779 aagtcaaacttttctcatataaattatagaccgttttcatgaactatcttggagagcttatgaaaa--taagatgaaaacaagttatggacatgtcataa 3528876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 31671174 - 31671102
Alignment:
Q  92 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    |||| ||||| ||| | ||||||||||| ||||||||||||||| |||||||||||  | |||||||||||||    
T  31671174 aaaacaaagttaaattgttttcatataagctataagctgttttcgtaaactatcctagatagcttatgaaaat 31671102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 195
Target Start/End: Original strand, 4246397 - 4246481
Alignment:
Q  109 ttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcat 195  Q
    ||||||||||||||||||||||||||||||| ||||  || ||||| ||| ||||  ||||  |||||||| ||| |||||||||||    
T  4246397 ttttcatataatctataagctgttttcataagctattatggagagcatataaaaa--taagttgaaaacagcttatggacatgtcat 4246481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 164
Target Start/End: Complemental strand, 33911361 - 33911310
Alignment:
Q  113 catataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    |||||||| ||||||||||||||||||||||||||||| || || |||||||    
T  33911361 catataatttataagctgttttcataaactatcctgaaaagtttgtgaaaat 33911310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 131 - 165
Target Start/End: Complemental strand, 29837145 - 29837111
Alignment:
Q  131 ttttcataaactatcctgaagagcttatgaaaatt 165  Q
    |||||||||||||||||||||||||||||||||||    
T  29837145 ttttcataaactatcctgaagagcttatgaaaatt 29837111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 202
Target Start/End: Original strand, 31324437 - 31324534
Alignment:
Q  103 aaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcataaatgat 202  Q
    ||||| ||||||| ||| ||||||||||  ||||||| ||||| |||||||||||| ||||  ||||   ||||||||||  | ||||||||||||||||    
T  31324437 aaactattttcatgtaagctataagctgcattcataagctatcatgaagagcttattaaaa--taagtctaaaacagtttttgaacatgtcataaatgat 31324534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 164
Target Start/End: Original strand, 1275136 - 1275191
Alignment:
Q  109 ttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    ||||||||||| ||||||||||||||||||   ||||||| |||||||||| ||||    
T  1275136 ttttcatataagctataagctgttttcatatgttatcctggagagcttatggaaat 1275191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 139
Target Start/End: Complemental strand, 2027506 - 2027459
Alignment:
Q  92 aaaagaaagtcaaacttttttcatataatctataagctgttttcataa 139  Q
    |||| ||||||||||| ||||||||||| |||||||||||| ||||||    
T  2027506 aaaataaagtcaaactattttcatataacctataagctgttctcataa 2027459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 155
Target Start/End: Original strand, 3155146 - 3155209
Alignment:
Q  92 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagct 155  Q
    |||| ||||||||||| ||| ||||||| ||||||||| |||||||||  ||||||| ||||||    
T  3155146 aaaacaaagtcaaactgtttccatataacctataagctattttcataagatatcctggagagct 3155209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 164
Target Start/End: Original strand, 13907822 - 13907889
Alignment:
Q  97 aaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    ||||||||||| ||||  || ||||| |||| |||||||| || ||||| ||||||||||||||||||    
T  13907822 aaagtcaaactgtttttgtaaaatctgtaagttgttttcaaaagctatcttgaagagcttatgaaaat 13907889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 164
Target Start/End: Original strand, 18264304 - 18264371
Alignment:
Q  97 aaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    ||||||||| | |||||||| ||  |||||||| ||||| ||||||||||||||||| ||||| ||||    
T  18264304 aaagtcaaattgttttcatacaagttataagctattttcttaaactatcctgaagaggttatggaaat 18264371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 158
Target Start/End: Complemental strand, 7149553 - 7149507
Alignment:
Q  112 tcatataatctataagctgttttcataaactatcctgaagagcttat 158  Q
    |||||||| |||||| || |||||||||||||||||| |||||||||    
T  7149553 tcatataagctataaactattttcataaactatcctggagagcttat 7149507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 151
Target Start/End: Original strand, 10860958 - 10861000
Alignment:
Q  109 ttttcatataatctataagctgttttcataaactatcctgaag 151  Q
    ||||| ||||||||||||||| ||||||||| |||||||||||    
T  10860958 ttttcgtataatctataagctattttcataagctatcctgaag 10861000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 197
Target Start/End: Original strand, 27894017 - 27894119
Alignment:
Q  92 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatg 191  Q
    |||| ||||||||| | |||| |||||| |||| || |||||||||||  |||| |||| ||||||||||||  ||||  |||||||||||| ||||||     
T  27894017 aaaataaagtcaaattgttttaatataaactattag-tgttttcataagatatcttgaaaagcttatgaaaa--taagctgaaaacagtttatggacata 27894113  T
Q  192 tcataa 197  Q
    ||||||    
T  27894114 tcataa 27894119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 163
Target Start/End: Original strand, 2167989 - 2168058
Alignment:
Q  94 aagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaa 163  Q
    ||||| |||||||| ||||| | |||  ||| || ||| |||||||||||||||| ||||||||||||||    
T  2167989 aagaatgtcaaactgttttcgtgtaagttatgagatgtcttcataaactatcctggagagcttatgaaaa 2168058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 163
Target Start/End: Original strand, 2179622 - 2179691
Alignment:
Q  94 aagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaa 163  Q
    ||||| |||||||| ||||| | |||  ||| || ||| |||||||||||||||| ||||||||||||||    
T  2179622 aagaatgtcaaactgttttcgtgtaagttatgagatgtcttcataaactatcctggagagcttatgaaaa 2179691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 115 - 164
Target Start/End: Original strand, 2735062 - 2735111
Alignment:
Q  115 tataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    ||||||||||||||||||||||||| | ||| |||| | |||||||||||    
T  2735062 tataatctataagctgttttcataagcaatcttgaacaacttatgaaaat 2735111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 56 - 164
Target Start/End: Original strand, 5328907 - 5329015
Alignment:
Q  56 aagtgcttatgaataagttatttctataac-attgacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagc 154  Q
    ||||||||| |  ||||||||||||||||| |  || |||| ||||||||||  |||| ||||||| |||||||||||||| |||  |||| || ||||     
T  5328907 aagtgcttacgtttaagttatttctataacaaaagataaaataaagtcaaaccatttttatataat-tataagctgttttcgtaagttatcatggagagt 5329005  T
Q  155 ttatgaaaat 164  Q
    ||||||||||    
T  5329006 ttatgaaaat 5329015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 97 - 138
Target Start/End: Original strand, 5550107 - 5550148
Alignment:
Q  97 aaagtcaaacttttttcatataatctataagctgttttcata 138  Q
    ||||||||| | ||||||||||| ||||||||||||||||||    
T  5550107 aaagtcaaattgttttcatataagctataagctgttttcata 5550148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 109 - 158
Target Start/End: Complemental strand, 24838826 - 24838777
Alignment:
Q  109 ttttcatataatctataagctgttttcataaactatcctgaagagcttat 158  Q
    ||||||||||| |||||||||| |||||||| ||||| || |||||||||    
T  24838826 ttttcatataagctataagctgatttcataagctatcatggagagcttat 24838777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 59 - 139
Target Start/End: Complemental strand, 29274363 - 29274282
Alignment:
Q  59 tgcttatgaataagttatttctataacatt-gacaaaagaaagtcaaacttttttcatataatctataagctgttttcataa 139  Q
    |||||||| ||||| |||||||||| ||   || |||| ||||||||| | ||||||||||| |||||| ||||||||||||    
T  29274363 tgcttatgtataagctatttctatagcaaaagataaaataaagtcaaattgttttcatataagctataaactgttttcataa 29274282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 64 - 164
Target Start/End: Original strand, 33887771 - 33887872
Alignment:
Q  64 atgaataagttatttctataacatt-gacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaa 162  Q
    ||||||||| ||||| |||||||   || |||| ||| ||||||| ||||  ||||||| |||| |||||||||||| ||||||||||  ||||||| ||    
T  33887771 atgaataagatatttttataacacaagataaaacaaactcaaactgttttagtataatcaataaactgttttcataagctatcctgaaatgcttatggaa 33887870  T
Q  163 at 164  Q
    ||    
T  33887871 at 33887872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 281948 - 281876
Alignment:
Q  92 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    |||| ||||||||  | ||||||||||| ||||||||||| ||||||| |||||||  |||||| ||| ||||    
T  281948 aaaataaagtcaacttgttttcatataagctataagctgtgttcataagctatcctagagagctcatggaaat 281876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 159
Target Start/End: Original strand, 1401102 - 1401146
Alignment:
Q  115 tataatctataagctgttttcataaactatcctgaagagcttatg 159  Q
    ||||| ||||||||||||||||||| ||||| || ||||||||||    
T  1401102 tataagctataagctgttttcataagctatcatggagagcttatg 1401146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 164
Target Start/End: Complemental strand, 8420337 - 8420225
Alignment:
Q  53 tataagtgcttatgaataagttatttctataacat-tgacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaag 151  Q
    |||||||||||||| | ||||||||||| ||| |  ||| |||| ||||||||||| | || ||||||  ||||||||||| || ||| ||||  || ||    
T  8420337 tataagtgcttatgtacaagttatttctttaataaatgataaaataaagtcaaactgtgtttatataaaatataagctgttctcgtaagctataatggag 8420238  T
Q  152 agcttatgaaaat 164  Q
    |||||||| ||||    
T  8420237 agcttatggaaat 8420225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 10400239 - 10400311
Alignment:
Q  92 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    |||| ||||||||| | || |||||||| ||||||| ||| |||||||  |||||||  ||||||||||||||    
T  10400239 aaaataaagtcaaattgttatcatataagctataagatgtcttcataagatatcctggtgagcttatgaaaat 10400311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 197
Target Start/End: Complemental strand, 10616635 - 10616538
Alignment:
Q  98 aagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcataa 197  Q
    |||||||| |||||||||||||  ||||||| ||||| |||| ||||  || ||||||||| ||||  ||||  ||| |||  |||||||||||||||||    
T  10616635 aagtcaaagttttttcatataaaatataagccgttttaataagctattttggagagcttataaaaa--taagctgaacacaacttacggacatgtcataa 10616538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 161
Target Start/End: Original strand, 13907409 - 13907457
Alignment:
Q  113 catataatctataagctgttttcataaactatcctgaagagcttatgaa 161  Q
    |||||||| | |||| ||||||||||| ||||||| |||||||||||||    
T  13907409 catataatttgtaagttgttttcataagctatcctaaagagcttatgaa 13907457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 33787845 - 33787773
Alignment:
Q  92 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    |||| ||||||||| |  ||||||||||  ||||||||||||||||||  |||| || |||||||||| ||||    
T  33787845 aaaacaaagtcaaattgatttcatataagttataagctgttttcataagttatcttggagagcttatggaaat 33787773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 3e-16; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 53 - 159
Target Start/End: Complemental strand, 28803646 - 28803539
Alignment:
Q  53 tataagtgcttatgaataagttatttctataacatt-gacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaag 151  Q
    |||||||||||||  |||||||||||| ||||||   || |||| |||||||||||  |||||||||| ||| ||| ||||||| |||||||||||| ||    
T  28803646 tataagtgcttatatataagttatttcgataacaaaagataaaataaagtcaaactgatttcatataagctacaagttgttttcttaaactatcctggag 28803547  T
Q  152 agcttatg 159  Q
    ||||||||    
T  28803546 agcttatg 28803539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 92 - 197
Target Start/End: Original strand, 33256710 - 33256813
Alignment:
Q  92 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatg 191  Q
    |||| ||||||||||| ||||||||||| |||||||| |||||||||| | |||||||||| | ||||||||  ||||  || ||||||||| | |||||    
T  33256710 aaaataaagtcaaactgttttcatataaactataagcagttttcataagccatcctgaagaccgtatgaaaa--taagctgagaacagtttatgaacatg 33256807  T
Q  192 tcataa 197  Q
    ||||||    
T  33256808 tcataa 33256813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 54 - 159
Target Start/End: Original strand, 10143103 - 10143209
Alignment:
Q  54 ataagtgcttatgaataagttatttctataac-attgacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaaga 152  Q
    ||||||||||||| |||||||||||||||||| |  || ||||  |||||||||| |||| |||||| ||||||| | ||||||||| ||||| || |||    
T  10143103 ataagtgcttatgtataagttatttctataacaaaagataaaattaagtcaaactgtttttatataagctataagtttttttcataagctatcatggaga 10143202  T
Q  153 gcttatg 159  Q
    | |||||    
T  10143203 gtttatg 10143209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 53 - 164
Target Start/End: Complemental strand, 3235522 - 3235412
Alignment:
Q  53 tataagtgcttatgaataagttatttctataacat-tgacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaag 151  Q
    |||||||||||||| || || ||||| |||||||  ||| |||| ||||||||||| ||| ||||||| |||||||||||||||||| |||||| ||||     
T  3235522 tataagtgcttatgtattagctatttttataacaaatga-aaaataaagtcaaactgttt-catataaactataagctgttttcatatactatcttgaaa 3235425  T
Q  152 agcttatgaaaat 164  Q
    || ||||| ||||    
T  3235424 agtttatggaaat 3235412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 53 - 148
Target Start/End: Complemental strand, 17952841 - 17952745
Alignment:
Q  53 tataagtgcttatgaataagttatttctataacatt-gacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctg 148  Q
    |||||| ||||||  ||||| |||||||||||||   || |||| ||||||||||| ||||||||||| ||| ||| ||||||||||| ||||||||    
T  17952841 tataagagcttatatataagctatttctataacaaaagataaaataaagtcaaactattttcatataagctacaagatgttttcataagctatcctg 17952745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 164
Target Start/End: Original strand, 9395117 - 9395172
Alignment:
Q  109 ttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    ||||||||||||||||||||||||||||| |  ||| ||| |||||||||||||||    
T  9395117 ttttcatataatctataagctgttttcattagttattctgtagagcttatgaaaat 9395172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 164
Target Start/End: Original strand, 15377752 - 15377807
Alignment:
Q  109 ttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    |||||||||||  |||||||||||||||||| |||| |||| ||||||||||||||    
T  15377752 ttttcatataagttataagctgttttcataagctattctgaggagcttatgaaaat 15377807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 164
Target Start/End: Original strand, 39983329 - 39983384
Alignment:
Q  109 ttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    ||||||||||| ||||||| ||||||||||| |||||||| |||||| ||||||||    
T  39983329 ttttcatataagctataagttgttttcataagctatcctggagagctaatgaaaat 39983384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 164
Target Start/End: Original strand, 41817099 - 41817210
Alignment:
Q  54 ataagtgcttatgaataagttatttctataacatt-gacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaaga 152  Q
    |||| |||||||||||||| |||||||||||||   || |||  |||  |||||| ||||  |||||| | |||||| |||||||||||||||||| |||    
T  41817099 ataaatgcttatgaataagctatttctataacacaagagaaattaaaagcaaactatttttgtataatgtgtaagctattttcataaactatcctggaga 41817198  T
Q  153 gcttatgaaaat 164  Q
    ||||||| ||||    
T  41817199 gcttatggaaat 41817210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 164
Target Start/End: Original strand, 43141846 - 43141913
Alignment:
Q  97 aaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    ||||||||| | ||| ||||||| ||||||| ||||||||||| ||||||||||||| ||||| ||||    
T  43141846 aaagtcaaattgtttccatataagctataagatgttttcataagctatcctgaagagtttatggaaat 43141913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 122 - 164
Target Start/End: Original strand, 4026817 - 4026859
Alignment:
Q  122 tataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    ||||||||||||||||||| ||||||||||| |||||||||||    
T  4026817 tataagctgttttcataaattatcctgaagaacttatgaaaat 4026859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 98 - 164
Target Start/End: Complemental strand, 13736387 - 13736321
Alignment:
Q  98 aagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    |||||||||| |||||| || | ||||||||||||||||||| |||| ||  |||||||||||||||    
T  13736387 aagtcaaactattttcacatcagctataagctgttttcataagctatactagagagcttatgaaaat 13736321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 122 - 164
Target Start/End: Original strand, 44644278 - 44644320
Alignment:
Q  122 tataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    ||||||||||||||| |||||||| ||||||||||||||||||    
T  44644278 tataagctgttttcaaaaactatcttgaagagcttatgaaaat 44644320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 158
Target Start/End: Original strand, 6561340 - 6561397
Alignment:
Q  101 tcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttat 158  Q
    ||||||||||||||||||| |||||||  ||||||| || |||||||| |||||||||    
T  6561340 tcaaacttttttcatataacctataagaagttttcagaagctatcctggagagcttat 6561397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 164
Target Start/End: Complemental strand, 10884594 - 10884549
Alignment:
Q  119 atctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    ||||||||||||||||||||| |||||||  |||||||||||||||    
T  10884594 atctataagctgttttcataagctatcctagagagcttatgaaaat 10884549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 109 - 158
Target Start/End: Original strand, 15780064 - 15780113
Alignment:
Q  109 ttttcatataatctataagctgttttcataaactatcctgaagagcttat 158  Q
    ||||||||||||||||||| ||||||||||| ||||| || |||||||||    
T  15780064 ttttcatataatctataagttgttttcataagctatcgtgcagagcttat 15780113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 164
Target Start/End: Complemental strand, 36415790 - 36415701
Alignment:
Q  76 tttctataaca-ttgacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    ||||||||||| |||| |||| |||||||||| ||||||||  |  ||||||||||||||||||| ||||| || ||| |||| ||||||    
T  36415790 tttctataacaattgataaaataaagtcaaacatttttcattgatgctataagctgttttcataagctatcatgtagaacttacgaaaat 36415701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 60 - 139
Target Start/End: Original strand, 39621890 - 39621968
Alignment:
Q  60 gcttatgaataagttatttctataacattgac-aaaagaaagtcaaacttttttcatataatctataagctgttttcataa 139  Q
    ||||||||||||| |||||||||||||   |  |||| |||||||||||||||   |||||||||||||||||||||||||    
T  39621890 gcttatgaataagatatttctataacacaaaataaaataaagtcaaactttttg--tataatctataagctgttttcataa 39621968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 197
Target Start/End: Complemental strand, 1939457 - 1939329
Alignment:
Q  68 ataagttatttctataacatt-gacaaaagaaagtcaaacttttttcatata-atctataagctgttttcataaactatcctgaagagcttatgaaaatt 165  Q
    |||||||||||||||||||   || |||| ||||| ||||| |||||||||  | |||||| |||||||||||| |||| ||| |||||||||| |||      
T  1939457 ataagttatttctataacaaaagataaaataaagtgaaactattttcatattgagctataa-ctgttttcataagctatactggagagcttatggaaa-- 1939361  T
Q  166 taagaagaaaacagtttacggacatgtcataa 197  Q
    ||||  |||||||| ||| |||||||||||||    
T  1939360 taagttgaaaacagcttatggacatgtcataa 1939329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 136
Target Start/End: Complemental strand, 11344424 - 11344340
Alignment:
Q  53 tataagtgcttatgaataagttatttctataac-attgacaaaagaaagtcaaacttttttcatataatctataagctgttttca 136  Q
    |||||||||||||| ||||| |||||||||||| |  || |||||||||||||| | |||||||| || ||||||  ||||||||    
T  11344424 tataagtgcttatgcataagatatttctataacaaaagataaaagaaagtcaaattgttttcatacaagctataaattgttttca 11344340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 160
Target Start/End: Complemental strand, 13630421 - 13630313
Alignment:
Q  53 tataagtgcttatgaataagttatttctataacatt-gacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaag 151  Q
    |||| ||||||||| ||||||||||||| || ||   || || | ||||||||||| ||||||||||||| ||||| ||||||| ||| |||||||  ||    
T  13630421 tataggtgcttatgtataagttatttctctatcaaaagataagataaagtcaaactgttttcatataatcaataagttgttttcctaatctatccttgag 13630322  T
Q  152 agcttatga 160  Q
    || ||||||    
T  13630321 agtttatga 13630313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 150
Target Start/End: Original strand, 13866865 - 13866917
Alignment:
Q  98 aagtcaaacttttttcatataatctataagctgttttcataaactatcctgaa 150  Q
    |||||||||| |||| |||||||||||||||| ||||||| | ||||||||||    
T  13866865 aagtcaaactgtttttatataatctataagctcttttcattagctatcctgaa 13866917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 22681285 - 22681213
Alignment:
Q  92 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    |||| |||| |||| | ||||||||||| ||||||||||||||||||| |||||||  ||| |||||| ||||    
T  22681285 aaaacaaagccaaattgttttcatataagctataagctgttttcataatctatcctagagaacttatggaaat 22681213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 192
Target Start/End: Original strand, 43205284 - 43205377
Alignment:
Q  97 aaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgt 192  Q
    |||| |||||| |||||||||||  ||||| |||||||||||| |||||  | |||||||||| |||  ||||  ||||||||||| |||||||||    
T  43205284 aaagccaaactgttttcatataagatataatctgttttcataagctatcacggagagcttatggaaa--taagttgaaaacagtttgcggacatgt 43205377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 139
Target Start/End: Original strand, 3102663 - 3102710
Alignment:
Q  92 aaaagaaagtcaaacttttttcatataatctataagctgttttcataa 139  Q
    |||| ||||||||||| |||| ||||||||||| ||||||||||||||    
T  3102663 aaaataaagtcaaactatttttatataatctattagctgttttcataa 3102710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 164
Target Start/End: Original strand, 16353837 - 16353903
Alignment:
Q  97 aaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    |||||||||||||| |||||||| |||||||||||||| |||| ||||| || ||| ||| |||||||    
T  16353837 aaagtcaaactttt-tcatataagctataagctgtttttataagctatcttggagatcttgtgaaaat 16353903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 164
Target Start/End: Original strand, 18066115 - 18066170
Alignment:
Q  109 ttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    ||||||||||| ||||||||||||||||||| ||||| || ||| |||| ||||||    
T  18066115 ttttcatataagctataagctgttttcataagctatcttggagaacttaagaaaat 18066170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 164
Target Start/End: Complemental strand, 18179323 - 18179268
Alignment:
Q  109 ttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    ||||||||||| |||||||||| |||||||| |||||||| ||| |||| ||||||    
T  18179323 ttttcatataagctataagctgctttcataagctatcctggagaacttacgaaaat 18179268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 152
Target Start/End: Original strand, 25800816 - 25800859
Alignment:
Q  109 ttttcatataatctataagctgttttcataaactatcctgaaga 152  Q
    ||||||||||| ||||||||||||||||||| ||||| ||||||    
T  25800816 ttttcatataagctataagctgttttcataagctatcttgaaga 25800859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 164
Target Start/End: Complemental strand, 35486458 - 35486391
Alignment:
Q  97 aaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    ||||||||||| ||||  |||||||||||||||||||||  || |||||||| |||| ||||| ||||    
T  35486458 aaagtcaaactgtttttgtataatctataagctgttttcgcaagctatcctggagaggttatggaaat 35486391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 164
Target Start/End: Complemental strand, 43985086 - 43985031
Alignment:
Q  109 ttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    ||||| |||||  |||||| ||||||||||| ||||| ||||||||||||||||||    
T  43985086 ttttcgtataaattataagttgttttcataagctatcttgaagagcttatgaaaat 43985031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 164
Target Start/End: Complemental strand, 1742126 - 1742060
Alignment:
Q  98 aagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    |||||||||| |||  ||||||  |||||||||||||||||| ||||| ||||||| ||||| ||||    
T  1742126 aagtcaaactctttatatataagatataagctgttttcataatctatcatgaagagtttatggaaat 1742060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 164
Target Start/End: Original strand, 3049974 - 3050016
Alignment:
Q  122 tataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    |||||||||||||||||| ||||| || |||||||||||||||    
T  3049974 tataagctgttttcataagctatcatggagagcttatgaaaat 3050016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 162
Target Start/End: Complemental strand, 5043660 - 5043590
Alignment:
Q  92 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaa 162  Q
    |||| ||||||||||| ||||||||||| ||| ||| ||||||||||| ||||| || | |||| ||||||    
T  5043660 aaaataaagtcaaactgttttcatataagctagaagttgttttcataagctatcatggatagctaatgaaa 5043590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 197
Target Start/End: Original strand, 9478229 - 9478372
Alignment:
Q  53 tataagtgcttatgaataagttatttctataaca-ttgacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaag 151  Q
    |||||||| ||||| ||||| ||||||||||||| | || |||| ||| ||||| | ||||||||||| ||||| ||||| ||| ||| ||||| || ||    
T  9478229 tataagtgtttatgtataagctatttctataacagtagataaaataaactcaaaatattttcatataagctatatgctgtgttcgtaagctatcgtggag 9478328  T
Q  152 agcttatgaaaatttaagaagaaaacagtttacggacatgtcataa 197  Q
    || | ||| ||   ||||| |||||||| ||| |||||||| ||||    
T  9478329 agttgatggaa--gtaagatgaaaacagcttatggacatgtaataa 9478372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 164
Target Start/End: Original strand, 25790102 - 25790168
Alignment:
Q  98 aagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    |||||||||| ||||||||||| ||| ||  |||||  |||| |||||||| |||||||||||||||    
T  25790102 aagtcaaactgttttcatataagctacaaattgtttggataatctatcctggagagcttatgaaaat 25790168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 197
Target Start/End: Original strand, 33942120 - 33942223
Alignment:
Q  92 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatg 191  Q
    |||| ||||||||||| ||||||| ||| ||||||| ||||||||||| | ||| |  |||||| |||||||||  ||  |||||||| ||| | |||||    
T  33942120 aaaataaagtcaaactgttttcatgtaagctataagttgttttcataagccatcatagagagctaatgaaaatt--agctgaaaacagcttatgaacatg 33942217  T
Q  192 tcataa 197  Q
    ||||||    
T  33942218 tcataa 33942223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 92 - 145
Target Start/End: Original strand, 11513868 - 11513921
Alignment:
Q  92 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatc 145  Q
    |||| ||||||||| | ||||||||||| ||||||| ||||||||||| |||||    
T  11513868 aaaataaagtcaaattgttttcatataagctataagttgttttcataagctatc 11513921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 115 - 164
Target Start/End: Original strand, 42419990 - 42420039
Alignment:
Q  115 tataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    ||||||||||||||| ||||||||| |||||||| | |||||||| ||||    
T  42419990 tataatctataagctattttcataagctatcctggatagcttatggaaat 42420039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 98 - 159
Target Start/End: Complemental strand, 42817470 - 42817409
Alignment:
Q  98 aagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatg 159  Q
    ||||||| || |||||||||||   |||| |||||||||||| |||| ||||||||||||||    
T  42817470 aagtcaagctgttttcatataagtaataaactgttttcataagctattctgaagagcttatg 42817409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 8017404 - 8017476
Alignment:
Q  92 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    |||| ||||| ||| | ||||||||||| || ||| |||||||||||| ||||| || ||| |||||||||||    
T  8017404 aaaacaaagttaaattattttcatataagctgtaaactgttttcataagctatcttggagaacttatgaaaat 8017476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 9556209 - 9556281
Alignment:
Q  92 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    |||| ||||||||  | |||||||| || |||||| |||||||||||| |||||||  | |||||||||||||    
T  9556209 aaaataaagtcaacgtgttttcatacaagctataaactgttttcataagctatcctagaaagcttatgaaaat 9556281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 13869195 - 13869123
Alignment:
Q  92 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    |||||| | ||||| | ||||||| ||| |||||||||||||||||||  ||||||| ||| || ||||||||    
T  13869195 aaaagacattcaaattattttcatctaagctataagctgttttcataagttatcctggagaactaatgaaaat 13869123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 164
Target Start/End: Original strand, 26626847 - 26626915
Alignment:
Q  96 gaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    |||||| ||| | ||||| ||||| ||| ||||||||||||||| ||||| || ||| |||||||||||    
T  26626847 gaaagttaaattgttttcgtataagctagaagctgttttcataagctatcttgcagaacttatgaaaat 26626915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 164
Target Start/End: Complemental strand, 30552732 - 30552672
Alignment:
Q  104 aacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    |||||||||||||| | ||||||  | |||||||||||||||||  |||||||||| ||||    
T  30552732 aacttttttcatatcagctataaattattttcataaactatcctagagagcttatggaaat 30552672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 157
Target Start/End: Complemental strand, 34055040 - 34054936
Alignment:
Q  54 ataagtgcttatgaataagttatttctataacatt-gacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaaga 152  Q
    ||||||||||||| ||| | |||||||||||||   || |||| |||| |||||| ||| ||||||   |||||| ||||||||||| |||||||  |||    
T  34055040 ataagtgcttatgtataggctatttctataacaaaagataaaataaaggcaaactgtttacatatatgatataaggtgttttcataagctatcctataga 34054941  T
Q  153 gctta 157  Q
    |||||    
T  34054940 gctta 34054936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 35485887 - 35485959
Alignment:
Q  92 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    |||| ||||||||||| |||   ||||| ||||||| |||||| |||| |||||||||||||| |||| ||||    
T  35485887 aaaataaagtcaaactatttcattataagctataagttgtttttataagctatcctgaagagcctatggaaat 35485959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 36863725 - 36863653
Alignment:
Q  92 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    |||| ||||||||||  |||| ||||||  |||||  ||||||||||| ||||| || |||||||||||||||    
T  36863725 aaaataaagtcaaacaatttttatataagttataaattgttttcataagctatcttggagagcttatgaaaat 36863653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 154
Target Start/End: Original strand, 37276722 - 37276778
Alignment:
Q  98 aagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagc 154  Q
    |||||||||| |||||||||||  |||||| |||||||||||  ||||||| |||||    
T  37276722 aagtcaaactgttttcatataagttataagttgttttcataagttatcctggagagc 37276778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 160
Target Start/End: Complemental strand, 37292447 - 37292379
Alignment:
Q  92 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatga 160  Q
    |||| ||||| ||||| ||||||||||| |||| || ||||||| ||| |||||||| |||| ||||||    
T  37292447 aaaataaagtaaaactattttcatataagctattagttgttttcttaagctatcctggagagtttatga 37292379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 97 - 164
Target Start/End: Original strand, 21157743 - 21157810
Alignment:
Q  97 aaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    ||||||||||| ||||||| ||| ||||||| ||||||||||  ||||||||||||||||||| ||||    
T  21157743 aaagtcaaactgttttcatgtaagctataagatgttttcatatgctatcctgaagagcttatggaaat 21157810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 197
Target Start/End: Original strand, 23819023 - 23819162
Alignment:
Q  56 aagtgcttatgaataagttatttctataacattgacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagct 155  Q
    ||||| ||||| |||||||||||| ||||||   | ||||   ||||||||| |||||||||||  |||||  ||||||||||| ||||| |||||||||    
T  23819023 aagtgtttatgtataagttatttccataacaaatataaaatgtagtcaaactgttttcatataagttataacatgttttcataagctatcttgaagagct 23819122  T
Q  156 tatgaaaatttaagaagaaaacagtttacggacatgtcataa 197  Q
    |||  |||  ||||| |||||||  ||| |||||||||||||    
T  23819123 tatagaaa--taagatgaaaacaacttatggacatgtcataa 23819162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 68 - 164
Target Start/End: Original strand, 49219084 - 49219181
Alignment:
Q  68 ataagttatttctataacattg-acaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    |||||||||||||||||||    | |||| ||||||||| | ||||||||||| ||||||| ||||||||||||||||| | ||||| ||||| ||||    
T  49219084 ataagttatttctataacaaaatataaaataaagtcaaattattttcatataagctataagttgttttcataaactatcttaaagagattatggaaat 49219181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 53 - 165
Target Start/End: Original strand, 44319880 - 44319992
Alignment:
Q  53 tataagtgcttatgaataagttatttctataacattgacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaaga 152  Q
    |||||||||| ||| ||||  ||||||||||| |  || |||| |||||| |||| ||||||||||| ||| ||||| |||| |||| |||||||  |||    
T  44319880 tataagtgctcatgtataaactatttctataaaaaagataaaataaagtcgaactgttttcatataagctacaagctattttgataagctatcctagaga 44319979  T
Q  153 gcttatgaaaatt 165  Q
     ||||||||||||    
T  44319980 acttatgaaaatt 44319992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 101 - 139
Target Start/End: Complemental strand, 17883584 - 17883546
Alignment:
Q  101 tcaaacttttttcatataatctataagctgttttcataa 139  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  17883584 tcaaacttttttcgtataatctataagctgttttcataa 17883546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 122 - 164
Target Start/End: Original strand, 47800623 - 47800665
Alignment:
Q  122 tataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    |||||||||||||||||| ||||| ||||||||||||||||||    
T  47800623 tataagctgttttcataagctatcttgaagagcttatgaaaat 47800665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 122 - 164
Target Start/End: Original strand, 56480348 - 56480390
Alignment:
Q  122 tataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    |||||||||||||||||||||||| || |||||||||||||||    
T  56480348 tataagctgttttcataaactatcttggagagcttatgaaaat 56480390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 197
Target Start/End: Original strand, 2996508 - 2996646
Alignment:
Q  58 gtgcttatgaataagttatttctataacatt-gacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagctt 156  Q
    ||||||||||||||| || ||| |||||||  || |||| | ||||||| | |||| ||||||  |||||| ||||||||||| ||||| || ||||| |    
T  2996508 gtgcttatgaataagctacttcgataacataagataaaatacagtcaaattgtttttatataagttataagttgttttcataagctatcttggagagcgt 2996607  T
Q  157 atgaaaatttaagaagaaaacagtttacggacatgtcataa 197  Q
    |||||||  ||||  ||||| || ||| |||||||||||||    
T  2996608 atgaaaa--taagttgaaaaaagcttatggacatgtcataa 2996646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 158
Target Start/End: Original strand, 35958594 - 35958691
Alignment:
Q  62 ttatgaataagttatttctataacatt-gacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttat 158  Q
    ||||| ||||| ||||||||||||||  |  |||| ||||||||| || ||| |||||| ||| ||||||||||||||| |||||||| |||| ||||    
T  35958594 ttatgtataagctatttctataacataagttaaaataaagtcaaatttgttttatataagctagaagctgttttcataagctatcctggagagtttat 35958691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 165
Target Start/End: Complemental strand, 12650355 - 12650311
Alignment:
Q  121 ctataagctgttttcataaactatcctgaagagcttatgaaaatt 165  Q
    ||||||||||||||||||| |||||||| |||||||||| |||||    
T  12650355 ctataagctgttttcataacctatcctggagagcttatggaaatt 12650311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 196
Target Start/End: Complemental strand, 30207710 - 30207569
Alignment:
Q  53 tataagtgcttatgaataagttatttctataacattgacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaaga 152  Q
    |||||||||||||| ||| |||| ||||||||||   |  |||  || ||||||| ||||||||||| ||||||| ||||||||||| ||| | |  |||    
T  30207710 tataagtgcttatgtatatgttagttctataacaaaaaataaaataaatcaaactgttttcatataagctataagttgttttcataagctaccttagaga 30207611  T
Q  153 gcttatgaaaatttaagaagaaaacagtttacggacatgtcata 196  Q
    | ||||| |||  ||||  |||||||| |||| |||||||||||    
T  30207610 gattatggaaa--taagctgaaaacagcttacagacatgtcata 30207569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 164
Target Start/End: Complemental strand, 36722757 - 36722697
Alignment:
Q  104 aacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    |||| |||||||||||  |||||| |||||| ||||  |||||||||||||||||||||||    
T  36722757 aactgttttcatataagttataagttgttttgataagttatcctgaagagcttatgaaaat 36722697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 164
Target Start/End: Original strand, 1706621 - 1706664
Alignment:
Q  121 ctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    ||||||||||||||||||||||||| || | |||||||||||||    
T  1706621 ctataagctgttttcataaactatcttggacagcttatgaaaat 1706664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 103 - 138
Target Start/End: Original strand, 10365753 - 10365788
Alignment:
Q  103 aaacttttttcatataatctataagctgttttcata 138  Q
    ||||||||||||||||| ||||||||||||||||||    
T  10365753 aaacttttttcatataaactataagctgttttcata 10365788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 164
Target Start/End: Original strand, 29778782 - 29778837
Alignment:
Q  109 ttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    ||||||||||| || |||| ||||||||||| ||| | ||||||||||||||||||    
T  29778782 ttttcatataagctgtaagttgttttcataagctaccttgaagagcttatgaaaat 29778837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 115 - 162
Target Start/End: Complemental strand, 35507402 - 35507355
Alignment:
Q  115 tataatctataagctgttttcataaactatcctgaagagcttatgaaa 162  Q
    ||||| ||||||| |||||||||| |||||||| ||||||||||||||    
T  35507402 tataagctataagttgttttcatacactatcctaaagagcttatgaaa 35507355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 115 - 162
Target Start/End: Complemental strand, 35507534 - 35507487
Alignment:
Q  115 tataatctataagctgttttcataaactatcctgaagagcttatgaaa 162  Q
    ||||| ||||||| |||||||||| |||||||| ||||||||||||||    
T  35507534 tataagctataagttgttttcatacactatcctaaagagcttatgaaa 35507487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 164
Target Start/End: Original strand, 53315305 - 53315368
Alignment:
Q  101 tcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    ||||||| ||||||||||| |||||||||||| ||| |||| | |||  |||||||||||||||    
T  53315305 tcaaactattttcatataagctataagctgttctcaaaaacaaacctagagagcttatgaaaat 53315368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 159
Target Start/End: Complemental strand, 54325137 - 54325070
Alignment:
Q  92 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatg 159  Q
    |||| ||||||||||| ||||||||||| ||||||||| |||||| || ||||| || |||| |||||    
T  54325137 aaaataaagtcaaactgttttcatataagctataagctattttcaaaagctatcatggagagtttatg 54325070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 164
Target Start/End: Complemental strand, 7694104 - 7694038
Alignment:
Q  98 aagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    |||||||||| ||||  ||||| |||||||||||||||||||  ||||||| |||| ||||| ||||    
T  7694104 aagtcaaactgtttttgtataagctataagctgttttcataagttatcctggagagtttatggaaat 7694038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 164
Target Start/End: Original strand, 25309233 - 25309283
Alignment:
Q  114 atataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    |||||| ||| || |||||||| |||||||||||| |||||||||||||||    
T  25309233 atataaactacaaactgttttcgtaaactatcctgcagagcttatgaaaat 25309283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 135
Target Start/End: Complemental strand, 42322018 - 42321936
Alignment:
Q  54 ataagtgcttatgaataagttatttctataac-attgacaaaagaaagtcaaacttttttcatataatctataagctgttttc 135  Q
    ||||||| ||||||||||| ||||| |||||| | ||| |||| ||||||||| | |||||||||||  |||||| |||||||    
T  42322018 ataagtgtttatgaataagctatttttataacaaatgataaaataaagtcaaattgttttcatataaattataagttgttttc 42321936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 159
Target Start/End: Original strand, 42866047 - 42866105
Alignment:
Q  101 tcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatg 159  Q
    ||||||| |||| |||||| ||||||| ||||||||||| |||||||  ||||||||||    
T  42866047 tcaaactgtttttatataagctataagttgttttcataagctatccttgagagcttatg 42866105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 185
Target Start/End: Original strand, 3155606 - 3155664
Alignment:
Q  125 aagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacg 185  Q
    ||||||||||||||||||||| |||||| || |||||||  ||||  ||||||||||||||    
T  3155606 aagctgttttcataaactatcttgaagaactaatgaaaa--taagctgaaaacagtttacg 3155664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 53 - 158
Target Start/End: Original strand, 3891507 - 3891611
Alignment:
Q  53 tataagtgcttatgaataagttatttctataacattgacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaaga 152  Q
    |||||||||||||||||||  |||||||||||||  || |||| |||||| |||  ||||  |||||| | |||| |||||| |||| |||||||  |||    
T  3891507 tataagtgcttatgaataaactatttctataaca-ggataaaataaagtcgaaccgtttttgtataatatgtaagttgtttttataagctatcctagaga 3891605  T
Q  153 gcttat 158  Q
    ||||||    
T  3891606 gcttat 3891611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 53 - 86
Target Start/End: Complemental strand, 4663836 - 4663803
Alignment:
Q  53 tataagtgcttatgaataagttatttctataaca 86  Q
    |||||||||||||| |||||||||||||||||||    
T  4663836 tataagtgcttatgtataagttatttctataaca 4663803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 131 - 164
Target Start/End: Original strand, 40008546 - 40008579
Alignment:
Q  131 ttttcataaactatcctgaagagcttatgaaaat 164  Q
    |||||||||||||||||||||||||||| |||||    
T  40008546 ttttcataaactatcctgaagagcttataaaaat 40008579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 98 - 139
Target Start/End: Complemental strand, 41097337 - 41097296
Alignment:
Q  98 aagtcaaacttttttcatataatctataagctgttttcataa 139  Q
    |||||||||| ||||||||| | |||||||||||||||||||    
T  41097337 aagtcaaactgttttcatattacctataagctgttttcataa 41097296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 1137706 - 1137754
Alignment:
Q  116 ataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    ||||||||||||||| |||||||||||||||   |||||||||| ||||    
T  1137706 ataatctataagctgctttcataaactatccaagagagcttatggaaat 1137754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 3175921 - 3175985
Alignment:
Q  92 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagctt 156  Q
    |||| ||||||||| | ||||||  |||  |||||||||||||||||| ||||||||||| ||||    
T  3175921 aaaataaagtcaaattgttttcaagtaagttataagctgttttcataagctatcctgaagggctt 3175985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 197
Target Start/End: Original strand, 11264301 - 11264374
Alignment:
Q  122 tataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcataa 197  Q
    |||||| ||||||||||| | |||||  |||||||||| ||||  |||  |||||||||||| |||||||||||||    
T  11264301 tataagttgttttcataagccatcctagagagcttatggaaat--aagttgaaaacagtttatggacatgtcataa 11264374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 16200081 - 16200009
Alignment:
Q  92 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    |||||||| ||||||| ||||  ||||  ||||||||||||||||||| ||||| || ||  |||||||||||    
T  16200081 aaaagaaaatcaaactgtttttgtatatgctataagctgttttcataagctatcttggaggacttatgaaaat 16200009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 21043299 - 21043263
Alignment:
Q  128 ctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    |||||||||||| |||||||||||||| |||||||||    
T  21043299 ctgttttcataagctatcctgaagagcatatgaaaat 21043263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 24929463 - 24929535
Alignment:
Q  92 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    |||| |||||| |||| |||||||| || ||||||| |||||||||||||| | ||  |||||||||| ||||    
T  24929463 aaaataaagtctaactgttttcataaaagctataagttgttttcataaactctactagagagcttatggaaat 24929535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 68 - 158
Target Start/End: Complemental strand, 6509426 - 6509337
Alignment:
Q  68 ataagttatttctataacattgacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttat 158  Q
    ||||||||| |||||||||  || |||| ||||||||| | | || |||||| ||||||||||||||||||| |||||||| |||||||||    
T  6509426 ataagttatatctataacaa-gataaaataaagtcaaattgtatttatataagctataagctgttttcataagctatcctggagagcttat 6509337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 164
Target Start/End: Complemental strand, 10075646 - 10075579
Alignment:
Q  97 aaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    ||||||||||| |||| ||||||  |||||||| ||||||||| |||||||  |||||||||||||||    
T  10075646 aaagtcaaactatttttatataagttataagctattttcataagctatcctagagagcttatgaaaat 10075579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 164
Target Start/End: Complemental strand, 39389271 - 39389204
Alignment:
Q  97 aaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    |||||||||||| |||||||||  |||| |||| ||| |||||| ||||| |||||||||||||||||    
T  39389271 aaagtcaaacttctttcatataggctatcagctatttccataaattatccagaagagcttatgaaaat 39389204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 54 - 159
Target Start/End: Original strand, 4763849 - 4763955
Alignment:
Q  54 ataagtgcttatgaataagttatttctataacatt-gacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaaga 152  Q
    ||||||| ||||| |||||||||||| | ||||   || |||| ||| ||||||  |||||| |||| ||||||||||||||  ||| ||||||||||||    
T  4763849 ataagtgtttatgcataagttatttcgacaacaaaagataaaataaattcaaaccgttttcacataagctataagctgtttttctaagctatcctgaaga 4763948  T
Q  153 gcttatg 159  Q
    |||||||    
T  4763949 gcttatg 4763955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 98 - 148
Target Start/End: Original strand, 30013194 - 30013244
Alignment:
Q  98 aagtcaaacttttttcatataatctataagctgttttcataaactatcctg 148  Q
    |||||||||| ||| ||||||| ||||||||||||||||||| ||||||||    
T  30013194 aagtcaaactgtttccatataagctataagctgttttcataagctatcctg 30013244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 54 - 164
Target Start/End: Complemental strand, 34522195 - 34522082
Alignment:
Q  54 ataagtgcttatgaataagttatttctataacatt-gacaaaagaaagtcaaact--tttttcatataatctataagctgttttcataaactatcctgaa 150  Q
    ||||| ||||||||||||| ||||||||| |||   || |||| |||||||||||  |||||  ||||||||| ||| | |||||| || ||||||| ||    
T  34522195 ataagcgcttatgaataagctatttctatgacacaagataaaataaagtcaaactactttttagtataatctaaaaggtattttcaaaagctatcctaaa 34522096  T
Q  151 gagcttatgaaaat 164  Q
    ||||||||||||||    
T  34522095 gagcttatgaaaat 34522082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 97 - 197
Target Start/End: Original strand, 11795067 - 11795165
Alignment:
Q  97 aaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcata 196  Q
    ||||||| ||| |||||||||||  ||||||||| |||||||| ||||  || |||||||||| |||  ||||  |||||||| ||| ||||||||||||    
T  11795067 aaagtcacactgttttcatataagttataagctgatttcataagctattatggagagcttatggaaa--taagctgaaaacaggttatggacatgtcata 11795164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 1470956 - 1470884
Alignment:
Q  92 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    |||| ||||||||| |  |||||||||| ||||||||||||||||||| ||||| |||| || ||| ||||||    
T  1470956 aaaataaagtcaaattactttcatataagctataagctgttttcataacctatcatgaaaagtttaggaaaat 1470884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 197
Target Start/End: Original strand, 12361168 - 12361265
Alignment:
Q  98 aagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaatttaagaagaaaacagtttacggacatgtcataa 197  Q
    |||||||| | ||||||||||| |||||||||||||||||||  ||| | | |||||| ||| |||  ||||  |||||||| ||| |||||||||||||    
T  12361168 aagtcaaattgttttcatataagctataagctgttttcataagttattcaggagagctaatggaaa--taagttgaaaacagcttatggacatgtcataa 12361265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 25097387 - 25097427
Alignment:
Q  123 ataagctgttttcataaactatcctgaagagcttatgaaaa 163  Q
    ||||||||||||||||| |||||||| ||||||||||||||    
T  25097387 ataagctgttttcataagctatcctggagagcttatgaaaa 25097427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 29973051 - 29973123
Alignment:
Q  92 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    |||| ||||||||||| |||||| |||| ||||||| ||||||||||| |||||||  |||| ||||| ||||    
T  29973051 aaaataaagtcaaactattttcacataagctataagttgttttcataagctatccttgagagtttatggaaat 29973123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 42215406 - 42215334
Alignment:
Q  92 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    |||| ||||||||||| ||||  |||||||||||| || ||||||||  |||||||| |||||||||| ||||    
T  42215406 aaaataaagtcaaactgtttttgtataatctataacctattttcatatgctatcctggagagcttatgtaaat 42215334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 164
Target Start/End: Original strand, 5227522 - 5227577
Alignment:
Q  109 ttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    |||| |||||| ||||||||||||||  ||| ||||| ||||||||||||||||||    
T  5227522 ttttaatataagctataagctgtttttgtaagctatcatgaagagcttatgaaaat 5227577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 164
Target Start/End: Complemental strand, 9836949 - 9836882
Alignment:
Q  97 aaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    ||||||||||| |||||||||||  || || |||||||||||| ||||| || |||||||||| ||||    
T  9836949 aaagtcaaactattttcatataagttacaacctgttttcataagctatcttggagagcttatggaaat 9836882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 164
Target Start/End: Original strand, 27028830 - 27028873
Alignment:
Q  121 ctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    ||||||||||||||||||| ||||| || |||||||||||||||    
T  27028830 ctataagctgttttcataagctatcttggagagcttatgaaaat 27028873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 164
Target Start/End: Original strand, 31862468 - 31862535
Alignment:
Q  97 aaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    ||||||||||| || || ||||| ||||||| |||||||||||  ||||||  |||||||||||||||    
T  31862468 aaagtcaaactattctcgtataagctataagatgttttcataagttatcctagagagcttatgaaaat 31862535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 115 - 150
Target Start/End: Original strand, 38537584 - 38537619
Alignment:
Q  115 tataatctataagctgttttcataaactatcctgaa 150  Q
    |||||||||||||||| |||||||||||||||||||    
T  38537584 tataatctataagctgctttcataaactatcctgaa 38537619  T

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Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 164
Target Start/End: Original strand, 41309772 - 41309827
Alignment:
Q  109 ttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    ||||||||||| ||||||| | ||||||||| |||||||||| || ||||||||||    
T  41309772 ttttcatataaactataagatattttcataagctatcctgaaaagtttatgaaaat 41309827  T

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Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 164
Target Start/End: Original strand, 4558730 - 4558840
Alignment:
Q  55 taagtgcttatgaataagttatttctataacatt-gacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagag 153  Q
    |||||| ||||| ||||| ||||||||||| |   || |||| ||||| ||| | ||||||||||  ||||||||||||| ||||| |||||||  ||||    
T  4558730 taagtgtttatgtataagctatttctataataaaagataaaataaagttaaattattttcatatatgctataagctgtttccataagctatcctagagag 4558829  T
Q  154 cttatgaaaat 164  Q
    |||||| ||||    
T  4558830 cttatggaaat 4558840  T

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Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 28769433 - 28769387
Alignment:
Q  98 aagtcaaacttttttcatataatctataagctgttttcataaactat 144  Q
    |||||||||| ||||| ||||| ||||||||||||||||||| ||||    
T  28769433 aagtcaaactattttcttataagctataagctgttttcataagctat 28769387  T

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Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 157
Target Start/End: Original strand, 42764248 - 42764302
Alignment:
Q  103 aaacttttttcatataatctataagctgttttcataaactatcctgaagagctta 157  Q
    ||||| |||||||| || ||||||||| |||||||||  ||||||||||||||||    
T  42764248 aaactgttttcatacaagctataagctattttcataagttatcctgaagagctta 42764302  T

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Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 139
Target Start/End: Complemental strand, 43704473 - 43704431
Alignment:
Q  97 aaagtcaaacttttttcatataatctataagctgttttcataa 139  Q
    ||||||||||| ||||||||||| ||||||| |||||||||||    
T  43704473 aaagtcaaactgttttcatataaactataagttgttttcataa 43704431  T

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Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 99 - 164
Target Start/End: Original strand, 1433525 - 1433590
Alignment:
Q  99 agtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    |||| |||| |||| || ||| || ||||| |||||||||| |||||||| |||||||||||||||    
T  1433525 agtcgaactatttttatttaagctttaagcagttttcataagctatcctggagagcttatgaaaat 1433590  T

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Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 53 - 157
Target Start/End: Original strand, 4390143 - 4390248
Alignment:
Q  53 tataagtgcttatgaataagttatttctataacatt-gacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaag 151  Q
    |||||| ||||| | |||||||||||| || |||   ||||||| | ||||||||| ||||   |||||||||||||| ||||||||| || ||| ||||    
T  4390143 tataagcgcttacggataagttatttcaatcacagaagacaaaacacagtcaaactgtttttgcataatctataagctattttcataagctctccagaag 4390242  T
Q  152 agctta 157  Q
    ||||||    
T  4390243 agctta 4390248  T

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Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 111 - 164
Target Start/End: Complemental strand, 9562344 - 9562291
Alignment:
Q  111 ttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    ||||||| | ||||||| | |||||||||||||||||||| |||| ||||||||    
T  9562344 ttcatatcaactataagatattttcataaactatcctgaaaagctcatgaaaat 9562291  T

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Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 121 - 162
Target Start/End: Complemental strand, 40014960 - 40014919
Alignment:
Q  121 ctataagctgttttcataaactatcctgaagagcttatgaaa 162  Q
    ||||||| ||||||||||| ||||| ||||||||||||||||    
T  40014960 ctataagatgttttcataagctatcttgaagagcttatgaaa 40014919  T

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Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 53 - 86
Target Start/End: Original strand, 42476035 - 42476068
Alignment:
Q  53 tataagtgcttatgaataagttatttctataaca 86  Q
    |||||||||||||||||||||||||||| |||||    
T  42476035 tataagtgcttatgaataagttatttctgtaaca 42476068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 164
Target Start/End: Original strand, 1470029 - 1470061
Alignment:
Q  132 tttcataaactatcctgaagagcttatgaaaat 164  Q
    |||||||| ||||||||||||||||||||||||    
T  1470029 tttcataatctatcctgaagagcttatgaaaat 1470061  T

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Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 8062494 - 8062566
Alignment:
Q  92 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    |||| ||||||||| | ||||||||||| ||||||| |||| |||||| ||||| |  |||| ||||||||||    
T  8062494 aaaaaaaagtcaaattgttttcatataagctataagatgttctcataagctatcttagagagtttatgaaaat 8062566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 10383855 - 10383927
Alignment:
Q  92 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    |||| ||| |||| || ||||| ||||||||||| ||||||||| ||||||||| |  |||||||||| ||||    
T  10383855 aaaataaaatcaagctgttttcgtataatctatatgctgttttcgtaaactatcatatagagcttatggaaat 10383927  T

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Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 11183515 - 11183587
Alignment:
Q  92 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    |||| ||||||||||| |  |||||| | |||||||||||||||| || ||| |||| |||||||||| ||||    
T  11183515 aaaacaaagtcaaactgtcctcatattagctataagctgttttcacaagctaccctggagagcttatggaaat 11183587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 145
Target Start/End: Original strand, 26717187 - 26717278
Alignment:
Q  53 tataagtgcttatgaataagttatttctataacattgacaaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatc 145  Q
    ||||||||||| |||||||| || || |||||||  || |||| ||||||||||| |||||| |||| | | | ||||||||||||| |||||    
T  26717187 tataagtgcttctgaataagctaattttataacaa-gataaaataaagtcaaactattttcaaataagcaaaaggctgttttcataatctatc 26717278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 139
Target Start/End: Original strand, 26820144 - 26820216
Alignment:
Q  68 ataagttatttctataacatt-gacaaaagaaagtcaaacttttttcatataatctataagctgttttcataa 139  Q
    |||||||||||||||||||   || |||| ||||||||||| ||||  ||||| |||||||| ||||||||||    
T  26820144 ataagttatttctataacaaaagataaaataaagtcaaactattttgttataaactataagccgttttcataa 26820216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 154
Target Start/End: Complemental strand, 30043828 - 30043784
Alignment:
Q  110 tttcatataatctataagctgttttcataaactatcctgaagagc 154  Q
    |||||||||  ||||||||||||||||||| |||| |||||||||    
T  30043828 tttcatatatgctataagctgttttcataagctatactgaagagc 30043784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 150
Target Start/End: Complemental strand, 32143139 - 32143087
Alignment:
Q  98 aagtcaaacttttttcatataatctataagctgttttcataaactatcctgaa 150  Q
    |||||||||| |||| ||| ||  ||||||| |||||||||||||||||||||    
T  32143139 aagtcaaactgtttttatacaagttataagcggttttcataaactatcctgaa 32143087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 33209320 - 33209248
Alignment:
Q  92 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    |||| |||||| |||| ||||||||||| ||||||||| |||| |||| |||| | | ||||||||| |||||    
T  33209320 aaaataaagtcgaactgttttcatataaactataagctatttttataagctattccggagagcttataaaaat 33209248  T

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Target: scaffold0352 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 164
Target Start/End: Original strand, 12060 - 12111
Alignment:
Q  113 catataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    |||||| |||||||  |||||||||||||||| ||||||||||| |||||||    
T  12060 catatattctataaattgttttcataaactattctgaagagcttttgaaaat 12111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 164
Target Start/End: Original strand, 6939 - 6994
Alignment:
Q  109 ttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaat 164  Q
    |||| |||||| ||||||||||||||  ||| ||||| ||||||||||||||||||    
T  6939 ttttaatataagctataagctgtttttgtaagctatcatgaagagcttatgaaaat 6994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 167
Target Start/End: Original strand, 40230 - 40276
Alignment:
Q  121 ctataagctgttttcataaactatcctgaagagcttatgaaaattta 167  Q
    ||||||| |||||||||||  ||||||||||||||||||||| ||||    
T  40230 ctataagttgttttcataagttatcctgaagagcttatgaaagttta 40276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 163
Target Start/End: Complemental strand, 2710 - 2641
Alignment:
Q  94 aagaaagtcaaacttttttcatataatctataagctgttttcataaactatcctgaagagcttatgaaaa 163  Q
    ||||| |||||||| ||||| | |||  ||| || ||| |||||||||||||||| ||||||||||||||    
T  2710 aagaatgtcaaactgttttcgtgtaagttatgagatgtcttcataaactatcctggagagcttatgaaaa 2641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 144
Target Start/End: Complemental strand, 4323 - 4271
Alignment:
Q  92 aaaagaaagtcaaacttttttcatataatctataagctgttttcataaactat 144  Q
    |||| ||||||||||  ||||||||||| |||||||||||||| |||| ||||    
T  4323 aaaataaagtcaaaccgttttcatataaactataagctgttttaataagctat 4271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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