View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20212_high_7 (Length: 271)
Name: NF20212_high_7
Description: NF20212
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20212_high_7 |
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Alignment Details
Target: chr3 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 9 - 257
Target Start/End: Complemental strand, 34572213 - 34571965
Alignment:
| Q |
9 |
agatgaagatatgtcttgtttgactcgagtcgtcaactatacaaaagctgcttcaaaattggttaaagctctcaataccaccgaggaacaaacctatatt |
108 |
Q |
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| T |
34572213 |
agatgaagatatgtcttgtttgactcgagtcgtcaactatacaaaagctgcttcaaaattggttaaagctctcaataccactgaggaacaaacctatatt |
34572114 |
T |
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| Q |
109 |
agagcgactaaagatgaatttgatgtacttgttagtgtatgcacccctgaggttccttatgggaattcatttcaggtcgaaattctttacaagataatgc |
208 |
Q |
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| T |
34572113 |
agagcgactaaagatgaatttgatgtacttgttagtgtatgcacccctgaggttccttatgggaattcatttcgggtcgaaattctttacaagataatgc |
34572014 |
T |
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| Q |
209 |
ctggcgaagatgtgtcttgtgtaaaggaatcctcacatcttgtgataac |
257 |
Q |
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| T |
34572013 |
ctggcgaagatgtgtcttgtgtaaaggaatcctcacatcttgtgataac |
34571965 |
T |
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